View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9247_low_35 (Length: 294)

Name: NF9247_low_35
Description: NF9247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9247_low_35
NF9247_low_35
[»] chr5 (18 HSPs)
chr5 (14-294)||(38452554-38452835)
chr5 (14-294)||(38170075-38170356)
chr5 (18-294)||(38182249-38182525)
chr5 (18-294)||(38188606-38188882)
chr5 (18-294)||(38209475-38209751)
chr5 (18-294)||(38215831-38216107)
chr5 (16-224)||(38220590-38220797)
chr5 (16-294)||(38185864-38186141)
chr5 (16-294)||(38212216-38212493)
chr5 (16-270)||(38156187-38156438)
chr5 (114-294)||(38220193-38220373)
chr5 (114-224)||(38220372-38220482)
chr5 (114-224)||(38220481-38220591)
chr5 (19-270)||(38443747-38443991)
chr5 (161-215)||(38443718-38443772)
chr5 (160-215)||(38170070-38170125)
chr5 (160-215)||(38220188-38220243)
chr5 (160-215)||(38452785-38452840)


Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 14 - 294
Target Start/End: Original strand, 38452554 - 38452835
Alignment:
Q  14 agagataagtgcaagaaatataggagacaaatccatgataaaaaagaaccaatatattaatcaatttgaatccgtacaatttgactacacttcaaaagaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  38452554 agagataagtgcaagaaatataggagacaaatccatgataaaaaagaaccaatatattaatcaatttgaatccgtacaatttaactacacttcaaaaaaa 38452653  T
Q  114 aa-ttagtgaactacattaggtttcaaaaagcaacgcttccaaaaagattttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattcc 212  Q
    || |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  38452654 aaattagagaactacattaggcttcaaaaagcaacgcttccaaaacgattttagaatatcttcgaattcatcattcacgacatgtagtccgtgaaaatcc 38452753  T
Q  213 ttcgccttagaaaaattgcacgtcaaatacaattttagaatatcttcaaattcatcatccataacatgtagtccgcgaaatt 294  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38452754 ttcaccttggaaaaattgcacgtcaaatacaattttagaatatcttcaaattcatcattcataacatgtagtccgcgaaatt 38452835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 14 - 294
Target Start/End: Complemental strand, 38170356 - 38170075
Alignment:
Q  14 agagataagtgcaagaaatataggagacaaatccatgataaaaaagaaccaatatattaatcaatttgaatccgtacaatttgactacacttcaaaagaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||         
T  38170356 agagataagtgcaagaaatataggagacaaatccatgataaaatagaaccaatatattaatcaatttgaatccgtacaatttaactacacttcaattttt 38170257  T
Q  114 aatt-agtgaactacattaggtttcaaaaagcaacgcttccaaaaagattttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattcc 212  Q
      || || ||||||||||||  |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  38170256 tttttagagaactacattagccttcaaaaagcaatgcttccaaaacgattttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaaatcc 38170157  T
Q  213 ttcgccttagaaaaattgcacgtcaaatacaattttagaatatcttcaaattcatcatccataacatgtagtccgcgaaatt 294  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  38170156 ttcaccttggaaaaattgcacgtcaaatacaattttagaatatcttcaaattcatcattcacaacatgtagtccgcgaaatt 38170075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 294
Target Start/End: Original strand, 38182249 - 38182525
Alignment:
Q  18 ataagtgcaagaaatataggagacaaatccatgataaaaaagaaccaatatattaatcaatttgaatccgtacaatttgactacacttcaaaagaaaatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||| ||    
T  38182249 ataagtgcaagaaatataggagacaaatccatgataaaaaagaaccaatgtattaatcaatttgaatccgtacaatttaactacacttcaaaaaaaattt 38182348  T
Q  118 agtgaactacattaggtttcaaaaagcaacgcttccaaaaagattttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattccttcgc 217  Q
    ||  ||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||| |||||| |    
T  38182349 agaaaactatattaggcttcaaaaagcaacgcttccaaaacgattttagaatatcttcaaattcatcgttcacgacatgcagtccttgaaagtccttcac 38182448  T
Q  218 cttagaaaaattgcacgtcaaatacaattttagaatatcttcaaattcatcatccataacatgtagtccgcgaaatt 294  Q
    |||||||||||||| | ||||||| |||||||||||||||||||||||||||| || |||||||| ||||| |||||    
T  38182449 cttagaaaaattgcgcttcaaatataattttagaatatcttcaaattcatcattcacaacatgtattccgcaaaatt 38182525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 294
Target Start/End: Complemental strand, 38188882 - 38188606
Alignment:
Q  18 ataagtgcaagaaatataggagacaaatccatgataaaaaagaaccaatatattaatcaatttgaatccgtacaatttgactacacttcaaaagaaaatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||| ||    
T  38188882 ataagtgcaagaaatataggagacaaatccatgataaaaaagaaccaatgtattaatcaatttgaatccgtacaatttaactacacttcaaaaaaaattt 38188783  T
Q  118 agtgaactacattaggtttcaaaaagcaacgcttccaaaaagattttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattccttcgc 217  Q
    ||  ||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||| |||||| |    
T  38188782 agaaaactatattaggcttcaaaaagcaacgcttccaaaacgattttagaatatcttcaaattcatcgttcacgacatgcagtccttgaaagtccttcac 38188683  T
Q  218 cttagaaaaattgcacgtcaaatacaattttagaatatcttcaaattcatcatccataacatgtagtccgcgaaatt 294  Q
    |||||||||||||| | ||||||| |||||||||||||||||||||||||||| || |||||||| ||||| |||||    
T  38188682 cttagaaaaattgcgcttcaaatataattttagaatatcttcaaattcatcattcacaacatgtattccgcaaaatt 38188606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 294
Target Start/End: Original strand, 38209475 - 38209751
Alignment:
Q  18 ataagtgcaagaaatataggagacaaatccatgataaaaaagaaccaatatattaatcaatttgaatccgtacaatttgactacacttcaaaagaaaatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||| ||    
T  38209475 ataagtgcaagaaatataggagacaaatccatgataaaaaagaaccaatgtattaatcaatttgaatccgtacaatttaactacacttcaaaaaaaattt 38209574  T
Q  118 agtgaactacattaggtttcaaaaagcaacgcttccaaaaagattttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattccttcgc 217  Q
    ||  ||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||| |||||| |    
T  38209575 agaaaactatattaggcttcaaaaagcaacgcttccaaaacgattttagaatatcttcaaattcatcgttcacgacatgcagtccttgaaagtccttcac 38209674  T
Q  218 cttagaaaaattgcacgtcaaatacaattttagaatatcttcaaattcatcatccataacatgtagtccgcgaaatt 294  Q
    |||||||||||||| | ||||||| |||||||||||||||||||||||||||| || |||||||| ||||| |||||    
T  38209675 cttagaaaaattgcgcttcaaatataattttagaatatcttcaaattcatcattcacaacatgtattccgcaaaatt 38209751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 294
Target Start/End: Complemental strand, 38216107 - 38215831
Alignment:
Q  18 ataagtgcaagaaatataggagacaaatccatgataaaaaagaaccaatatattaatcaatttgaatccgtacaatttgactacacttcaaaagaaaatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||| ||    
T  38216107 ataagtgcaagaaatataggagacaaatccatgataaaaaagaaccaatgtattaatcaatttgaatccgtacaatttaactacacttcaaaaaaaattt 38216008  T
Q  118 agtgaactacattaggtttcaaaaagcaacgcttccaaaaagattttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattccttcgc 217  Q
    ||  ||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||| |||||| |    
T  38216007 agaaaactatattaggcttcaaaaagcaacgcttccaaaacgattttagaatatcttcaaattcatcgttcacgacatgcagtccttgaaagtccttcac 38215908  T
Q  218 cttagaaaaattgcacgtcaaatacaattttagaatatcttcaaattcatcatccataacatgtagtccgcgaaatt 294  Q
    |||| ||||||||| | ||||||| |||||||||||||||||||||||||||| || |||||||| ||||| |||||    
T  38215907 cttaaaaaaattgcgcttcaaatataattttagaatatcttcaaattcatcattcacaacatgtattccgcaaaatt 38215831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 16 - 224
Target Start/End: Complemental strand, 38220797 - 38220590
Alignment:
Q  16 agataagtgcaagaaatataggagacaaatccatgataaaaaagaaccaatatattaatcaatttgaatccgtacaatttgactacacttcaaaagaaaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38220797 agataagtgcaagaaatataggagacaaatccatgataaaatagaaccaatatattaatcaatttgaatccgtacaatt-gactacacttcaaaagaaaa 38220699  T
Q  116 ttagtgaactacattaggtttcaaaaagcaacgcttccaaaaagattttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattccttc 215  Q
    |||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38220698 ttagagaactacattaggtttcaaaaagcaacacttccaaaacgattttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattccttc 38220599  T
Q  216 gccttagaa 224  Q
    |||||||||    
T  38220598 gccttagaa 38220590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 16 - 294
Target Start/End: Complemental strand, 38186141 - 38185864
Alignment:
Q  16 agataagtgcaagaaatataggagacaaatccatgataaaaaagaaccaatatattaatcaatttgaatccgtacaatttgactacacttcaaaagaaaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||     
T  38186141 agataagtgcaagaaatataggagacaaatccatgataaaaaagaaccaatgtattaatcaatttgaatccgtacaatttaactacacttcaaaaaaaat 38186042  T
Q  116 ttagtgaactacattaggtttcaaaaagcaacgcttccaaaaagattttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattccttc 215  Q
    ||||  || || |||||| |||||||||||||||||||||||  |||||||||||||||| |||||||| |||||||||| |||||||||||| ||||||    
T  38186041 ttagaaaattatattaggcttcaaaaagcaacgcttccaaaacaattttagaatatcttcaaattcatcgttcacgacat-cagtccgtgaaagtccttc 38185943  T
Q  216 gccttagaaaaattgcacgtcaaatacaattttagaatatcttcaaattcatcatccataacatgtagtccgcgaaatt 294  Q
     ||||||||||||||| | ||||||| |||||||||||||||||||||||||||| || |||||||| ||||| |||||    
T  38185942 accttagaaaaattgcgcttcaaatataattttagaatatcttcaaattcatcattcacaacatgtattccgcaaaatt 38185864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 16 - 294
Target Start/End: Original strand, 38212216 - 38212493
Alignment:
Q  16 agataagtgcaagaaatataggagacaaatccatgataaaaaagaaccaatatattaatcaatttgaatccgtacaatttgactacacttcaaaagaaaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||     
T  38212216 agataagtgcaagaaatataggagacaaatccatgataaaaaagaaccaatgtattaatcaatttgaatccgtacaatttaactacacttcaaaaaaaat 38212315  T
Q  116 ttagtgaactacattaggtttcaaaaagcaacgcttccaaaaagattttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattccttc 215  Q
    ||||  || || |||||| |||||||||||||||||||||||  |||||||||||||||| |||||||| |||||||||| |||||||||||| ||||||    
T  38212316 ttagaaaattatattaggcttcaaaaagcaacgcttccaaaacaattttagaatatcttcaaattcatcgttcacgacat-cagtccgtgaaagtccttc 38212414  T
Q  216 gccttagaaaaattgcacgtcaaatacaattttagaatatcttcaaattcatcatccataacatgtagtccgcgaaatt 294  Q
     ||||||||||||||| | ||||||| |||||||||||||||||||||||||||| || |||||||| ||||| |||||    
T  38212415 accttagaaaaattgcgcttcaaatataattttagaatatcttcaaattcatcattcacaacatgtattccgcaaaatt 38212493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 16 - 270
Target Start/End: Complemental strand, 38156438 - 38156187
Alignment:
Q  16 agataagtgcaagaaatataggagacaaatccatgataaaaaagaaccaatatattaatcaatttgaatccgtacaatttgactacacttcaaaagaaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||| ||||| |   |||||||||||||| ||||    
T  38156438 agataagtgcaagaaatataggagacaaatccatgataaaaa-gaaccaatatattactcgatttgaatctgtacagta--actacacttcaaaaaaaaa 38156342  T
Q  116 ttagtgaactacattaggtttcaaaaagcaacgcttccaaaaagattttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattccttc 215  Q
    |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||    
T  38156341 ttagagaactacattaggcttcaaaaagcaacgcttccaaaacgattttagaatatcttcgaattcatcattcacaacatgaagtccatgaaattccttc 38156242  T
Q  216 gccttagaaaaattgcacgtcaaatacaattttagaatatcttcaaattcatcat 270  Q
      |||||||||||||| | ||||| ||||||||||||||||||||||||||||||    
T  38156241 ttcttagaaaaattgcgcttcaaaaacaattttagaatatcttcaaattcatcat 38156187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 38220373 - 38220193
Alignment:
Q  114 aattagtgaactacattaggtttcaaaaagcaacgcttccaaaaagattttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattcct 213  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38220373 aattagagaactacattaggtttcaaaaagcaacacttccaaaacgattttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattcct 38220274  T
Q  214 tcgccttagaaaaattgcacgtcaaatacaattttagaatatcttcaaattcatcatccataacatgtagtccgcgaaatt 294  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38220273 tcgccttagaaaaattgcacgtcaaataaaattttagaatatcttcaaattcatcattcataacatgtagtccgcgaaatt 38220193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 114 - 224
Target Start/End: Complemental strand, 38220482 - 38220372
Alignment:
Q  114 aattagtgaactacattaggtttcaaaaagcaacgcttccaaaaagattttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattcct 213  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38220482 aattagagaactacattaggtttcaaaaagcaacacttccaaaacgattttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattcct 38220383  T
Q  214 tcgccttagaa 224  Q
    |||||||||||    
T  38220382 tcgccttagaa 38220372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 114 - 224
Target Start/End: Complemental strand, 38220591 - 38220481
Alignment:
Q  114 aattagtgaactacattaggtttcaaaaagcaacgcttccaaaaagattttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattcct 213  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38220591 aattagagaactacattaggtttcaaaaagcaacacttccaaaatgattttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattcct 38220492  T
Q  214 tcgccttagaa 224  Q
    |||||||||||    
T  38220491 tcgccttagaa 38220481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 270
Target Start/End: Complemental strand, 38443991 - 38443747
Alignment:
Q  19 taagtgcaagaaatataggagacaaatccatgataaaaaagaaccaatatattaatcaatttgaatccgtacaatttgactacacttcaaaagaaaatta 118  Q
    |||||| |||||||||| |||||| |||||||||||||||   ||||||||||||| ||||||||||| ||||||| ||||  ||| || ||  | ||||    
T  38443991 taagtggaagaaatatatgagacagatccatgataaaaaa---ccaatatattaataaatttgaatccatacaatt-gactgtact-cagaa--acatta 38443899  T
Q  119 gtgaactacattaggtttcaaaaagcaacgcttccaaaaagattttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattccttcgcc 218  Q
    ||||||||||   |   |||||||   ||  || |||||   || ||||||||||||||||||||| |||||||  || ||||| ||||||||||||  |    
T  38443898 gtgaactacaccggacatcaaaaaattacaatttcaaaacagttgtagaatatcttcgaattcatcgttcacgatgtgtagtccatgaaattccttcttc 38443799  T
Q  219 ttagaaaaattgcacgtcaaatacaattttagaatatcttcaaattcatcat 270  Q
    || |||||||| | | ||||| ||| ||||||||||||||||||||||||||    
T  38443798 tttgaaaaattacgcttcaaaaacagttttagaatatcttcaaattcatcat 38443747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 38443772 - 38443718
Alignment:
Q  161 ttttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattccttc 215  Q
    ||||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||    
T  38443772 ttttagaatatcttcaaattcatcattcacgatatgcagtccatgaaattgcttc 38443718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 38170125 - 38170070
Alignment:
Q  160 attttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattccttc 215  Q
    |||||||||||||||| |||||||||||||| ||||| |||||| |||||| ||||    
T  38170125 attttagaatatcttcaaattcatcattcacaacatgtagtccgcgaaatttcttc 38170070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 38220243 - 38220188
Alignment:
Q  160 attttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattccttc 215  Q
    |||||||||||||||| |||||||||||||  ||||| |||||| |||||| ||||    
T  38220243 attttagaatatcttcaaattcatcattcataacatgtagtccgcgaaatttcttc 38220188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 38452785 - 38452840
Alignment:
Q  160 attttagaatatcttcgaattcatcattcacgacatgcagtccgtgaaattccttc 215  Q
    |||||||||||||||| |||||||||||||  ||||| |||||| |||||| ||||    
T  38452785 attttagaatatcttcaaattcatcattcataacatgtagtccgcgaaatttcttc 38452840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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