View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9247_low_41 (Length: 257)
Name: NF9247_low_41
Description: NF9247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9247_low_41 |
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Alignment Details
Target: chr2 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 17238351 - 17238498
Alignment:
| Q |
97 |
agaggttacactgcatcactttttcatcttcttctttttgagctaagattgcatcaatgatatctagtttgagcaatcttgctttccgttgtgagttccc |
196 |
Q |
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| T |
17238351 |
agaggttacactgcatcactttttcatcttcttctttttgagttaagattgcatcaatgatatctagtttgagcaatcttacttttcgttgtgtgttccc |
17238450 |
T |
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| Q |
197 |
ctagttgtattcaactttttgatagttcagggccatggattctatgtt |
244 |
Q |
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| T |
17238451 |
ctagttgtattcaactttttgatggttcagggccatggattctatgtt |
17238498 |
T |
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