View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9247_low_6 (Length: 597)

Name: NF9247_low_6
Description: NF9247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9247_low_6
NF9247_low_6
[»] chr1 (99 HSPs)
chr1 (78-525)||(33173182-33173635)
chr1 (422-525)||(51436713-51436815)
chr1 (18-68)||(33173107-33173157)
chr1 (532-584)||(5477163-5477215)
chr1 (423-525)||(47721438-47721538)
chr1 (423-525)||(47728430-47728530)
chr1 (532-582)||(51571423-51571473)
chr1 (532-581)||(49453499-49453548)
chr1 (423-510)||(48261168-48261254)
chr1 (423-505)||(50775118-50775199)
chr1 (532-581)||(14983792-14983841)
chr1 (532-581)||(40596057-40596106)
chr1 (532-581)||(41507197-41507246)
chr1 (532-581)||(45272163-45272212)
chr1 (468-525)||(50824813-50824870)
chr1 (429-525)||(41507136-41507231)
chr1 (448-507)||(14983825-14983884)
chr1 (269-312)||(33153189-33153232)
chr1 (532-579)||(44517966-44518013)
chr1 (423-509)||(9566918-9567003)
chr1 (532-586)||(29293967-29294021)
chr1 (547-581)||(32960383-32960417)
chr1 (532-586)||(37690437-37690491)
chr1 (544-582)||(49241506-49241544)
chr1 (532-581)||(27687522-27687571)
chr1 (532-581)||(40139134-40139183)
chr1 (548-581)||(49570032-49570065)
chr1 (548-581)||(49931589-49931622)
chr1 (541-581)||(18541054-18541094)
chr1 (546-582)||(29154814-29154850)
chr1 (456-512)||(31433551-31433606)
chr1 (546-586)||(37843430-37843470)
chr1 (546-586)||(50141933-50141973)
chr1 (423-525)||(49065307-49065406)
chr1 (544-582)||(6143715-6143753)
chr1 (548-582)||(8200111-8200145)
chr1 (423-525)||(13489691-13489791)
chr1 (548-582)||(26967246-26967280)
chr1 (548-582)||(33358160-33358194)
chr1 (548-582)||(38713606-38713640)
chr1 (423-497)||(40680814-40680887)
chr1 (427-525)||(40699779-40699875)
chr1 (548-582)||(47214244-47214278)
chr1 (548-582)||(47721445-47721479)
chr1 (548-582)||(47728437-47728471)
chr1 (548-582)||(48220145-48220179)
chr1 (548-582)||(49559200-49559234)
chr1 (532-578)||(50797799-50797845)
chr1 (548-582)||(51286368-51286402)
chr1 (548-582)||(52267239-52267273)
chr1 (423-521)||(52362511-52362607)
chr1 (548-582)||(52362518-52362552)
chr1 (548-581)||(649804-649837)
chr1 (552-581)||(1156518-1156547)
chr1 (548-581)||(1689427-1689460)
chr1 (548-581)||(3851193-3851226)
chr1 (532-581)||(4637944-4637993)
chr1 (548-581)||(5771750-5771783)
chr1 (544-581)||(5975568-5975605)
chr1 (548-581)||(9566963-9566996)
chr1 (456-525)||(11597697-11597765)
chr1 (552-581)||(12489584-12489613)
chr1 (532-561)||(15061853-15061882)
chr1 (532-581)||(15466766-15466815)
chr1 (532-581)||(16836118-16836167)
chr1 (549-582)||(16986975-16987008)
chr1 (548-581)||(18434830-18434863)
chr1 (532-581)||(29264023-29264072)
chr1 (548-581)||(30536027-30536060)
chr1 (548-581)||(37619579-37619612)
chr1 (548-581)||(37685366-37685399)
chr1 (548-581)||(37700119-37700152)
chr1 (532-581)||(41558012-41558061)
chr1 (532-581)||(42539426-42539475)
chr1 (548-581)||(44723396-44723429)
chr1 (552-581)||(45470843-45470872)
chr1 (532-581)||(46903489-46903538)
chr1 (548-581)||(47642609-47642642)
chr1 (532-581)||(48256928-48256975)
chr1 (548-581)||(48858859-48858892)
chr1 (532-581)||(50153980-50154029)
chr1 (468-525)||(50328083-50328140)
chr1 (548-581)||(50775159-50775192)
chr1 (548-581)||(51571708-51571741)
chr1 (548-581)||(52437530-52437563)
chr1 (546-586)||(366690-366730)
chr1 (531-571)||(1690453-1690493)
chr1 (548-584)||(4213108-4213144)
chr1 (548-580)||(8828126-8828158)
chr1 (548-580)||(10890049-10890081)
chr1 (548-580)||(13489698-13489730)
chr1 (548-580)||(15705065-15705097)
chr1 (548-584)||(17082742-17082778)
chr1 (429-525)||(18336181-18336275)
chr1 (548-580)||(18336182-18336214)
chr1 (462-510)||(18512300-18512348)
chr1 (548-580)||(32915075-32915107)
chr1 (546-586)||(39010847-39010887)
chr1 (430-506)||(50153938-50154013)
[»] chr4 (77 HSPs)
chr4 (423-525)||(52895256-52895357)
chr4 (423-525)||(28458319-28458419)
chr4 (532-586)||(46173558-46173612)
chr4 (423-525)||(2999141-2999241)
chr4 (532-578)||(32365673-32365719)
chr4 (532-586)||(39241299-39241353)
chr4 (532-581)||(4511833-4511882)
chr4 (430-511)||(5249904-5249984)
chr4 (532-581)||(42490928-42490977)
chr4 (532-581)||(48326560-48326609)
chr4 (424-508)||(31468947-31469030)
chr4 (424-510)||(53801716-53801799)
chr4 (532-586)||(5234469-5234523)
chr4 (532-586)||(30778262-30778316)
chr4 (532-586)||(54036527-54036581)
chr4 (426-511)||(149440-149524)
chr4 (424-525)||(27371170-27371269)
chr4 (532-581)||(28676155-28676204)
chr4 (548-581)||(37060353-37060386)
chr4 (424-525)||(37514074-37514173)
chr4 (468-525)||(49896608-49896665)
chr4 (468-521)||(54802622-54802675)
chr4 (532-584)||(5386392-5386444)
chr4 (429-525)||(28657383-28657477)
chr4 (546-586)||(38844488-38844528)
chr4 (548-584)||(39158141-39158177)
chr4 (532-568)||(41119497-41119533)
chr4 (546-586)||(46911931-46911971)
chr4 (548-579)||(336812-336843)
chr4 (448-507)||(23667931-23667990)
chr4 (424-525)||(37997285-37997382)
chr4 (532-586)||(1580281-1580334)
chr4 (548-582)||(28458378-28458412)
chr4 (548-582)||(28657442-28657476)
chr4 (548-582)||(30170021-30170055)
chr4 (552-586)||(38952728-38952762)
chr4 (548-582)||(40609646-40609680)
chr4 (548-582)||(43769747-43769781)
chr4 (552-586)||(44165948-44165982)
chr4 (548-581)||(149487-149520)
chr4 (548-581)||(2268510-2268543)
chr4 (548-581)||(2738270-2738303)
chr4 (548-581)||(5249904-5249937)
chr4 (548-581)||(5932766-5932799)
chr4 (549-582)||(6494894-6494927)
chr4 (548-581)||(10250518-10250551)
chr4 (456-525)||(12138913-12138982)
chr4 (532-581)||(16214689-16214738)
chr4 (532-581)||(19232136-19232185)
chr4 (532-581)||(26440684-26440733)
chr4 (532-581)||(27384195-27384244)
chr4 (532-581)||(28899218-28899267)
chr4 (532-565)||(37547073-37547106)
chr4 (548-581)||(44257732-44257765)
chr4 (548-581)||(45761247-45761280)
chr4 (532-581)||(46686253-46686301)
chr4 (456-525)||(50831698-50831766)
chr4 (548-581)||(50890076-50890109)
chr4 (546-595)||(53583117-53583166)
chr4 (468-525)||(56271432-56271489)
chr4 (423-491)||(2738243-2738310)
chr4 (553-581)||(5466498-5466526)
chr4 (554-586)||(7161523-7161555)
chr4 (541-581)||(12241086-12241126)
chr4 (468-512)||(12595585-12595629)
chr4 (546-586)||(25523196-25523236)
chr4 (424-507)||(29175256-29175336)
chr4 (533-581)||(29891865-29891913)
chr4 (546-582)||(31275179-31275215)
chr4 (548-580)||(31657682-31657714)
chr4 (541-581)||(33820339-33820379)
chr4 (548-580)||(38338925-38338957)
chr4 (541-581)||(39881033-39881073)
chr4 (546-586)||(46794499-46794539)
chr4 (546-586)||(51039114-51039154)
chr4 (548-580)||(55609169-55609201)
chr4 (554-586)||(56379433-56379465)
[»] chr7 (61 HSPs)
chr7 (429-525)||(23679980-23680075)
chr7 (532-586)||(22330629-22330683)
chr7 (532-586)||(37351988-37352042)
chr7 (426-510)||(41189500-41189583)
chr7 (532-579)||(2469711-2469758)
chr7 (532-586)||(41985098-41985152)
chr7 (423-508)||(27568046-27568130)
chr7 (424-525)||(46829509-46829608)
chr7 (446-521)||(4225803-4225877)
chr7 (423-525)||(15564940-15565040)
chr7 (426-504)||(24532905-24532982)
chr7 (532-586)||(30180526-30180580)
chr7 (423-525)||(41018692-41018792)
chr7 (532-577)||(25887602-25887647)
chr7 (532-581)||(27688656-27688705)
chr7 (426-525)||(12645852-12645950)
chr7 (546-581)||(28824536-28824571)
chr7 (423-506)||(31445346-31445428)
chr7 (532-579)||(31785476-31785523)
chr7 (424-525)||(39029890-39029988)
chr7 (456-507)||(41430111-41430162)
chr7 (532-571)||(43444643-43444682)
chr7 (548-582)||(7817673-7817707)
chr7 (532-586)||(8459622-8459676)
chr7 (532-586)||(27778087-27778141)
chr7 (532-586)||(37856163-37856217)
chr7 (424-486)||(38340363-38340424)
chr7 (532-586)||(39875807-39875861)
chr7 (532-586)||(41254795-41254849)
chr7 (532-586)||(43213327-43213381)
chr7 (423-525)||(44184501-44184601)
chr7 (532-581)||(237032-237081)
chr7 (548-581)||(3937124-3937157)
chr7 (468-525)||(6109913-6109970)
chr7 (548-581)||(6269402-6269435)
chr7 (456-517)||(6699797-6699858)
chr7 (548-581)||(13152628-13152661)
chr7 (468-517)||(20454317-20454366)
chr7 (468-525)||(28036816-28036873)
chr7 (447-500)||(30667744-30667797)
chr7 (548-581)||(30941421-30941454)
chr7 (548-581)||(34978332-34978365)
chr7 (468-525)||(36019488-36019545)
chr7 (548-581)||(42584838-42584871)
chr7 (424-497)||(43025369-43025441)
chr7 (548-581)||(44496805-44496838)
chr7 (552-581)||(45420063-45420092)
chr7 (548-580)||(3343333-3343365)
chr7 (533-581)||(10619702-10619750)
chr7 (548-580)||(11352977-11353009)
chr7 (546-582)||(18067889-18067925)
chr7 (546-586)||(19426613-19426653)
chr7 (546-586)||(21752691-21752731)
chr7 (429-525)||(22816973-22817067)
chr7 (553-581)||(26123407-26123435)
chr7 (553-581)||(33056658-33056686)
chr7 (456-508)||(34507164-34507216)
chr7 (446-510)||(35627977-35628041)
chr7 (424-507)||(36352544-36352628)
chr7 (423-522)||(43482553-43482649)
chr7 (548-580)||(44184562-44184594)
[»] chr8 (52 HSPs)
chr8 (532-582)||(5502379-5502429)
chr8 (531-581)||(16011920-16011970)
chr8 (532-586)||(1179414-1179467)
chr8 (423-525)||(14707285-14707386)
chr8 (455-525)||(18126127-18126197)
chr8 (532-586)||(44103784-44103838)
chr8 (426-507)||(45405563-45405643)
chr8 (532-579)||(1796504-1796551)
chr8 (423-525)||(41159831-41159931)
chr8 (532-581)||(1370288-1370337)
chr8 (532-581)||(14710896-14710945)
chr8 (468-525)||(36885430-36885487)
chr8 (532-581)||(37392131-37392180)
chr8 (532-581)||(37524431-37524480)
chr8 (429-525)||(34873871-34873965)
chr8 (423-507)||(37942866-37942949)
chr8 (430-521)||(888203-888292)
chr8 (434-525)||(5740728-5740817)
chr8 (546-581)||(11114672-11114707)
chr8 (546-581)||(13884163-13884198)
chr8 (533-576)||(36178268-36178311)
chr8 (426-525)||(37597270-37597367)
chr8 (532-570)||(9047084-9047122)
chr8 (548-582)||(30439507-30439541)
chr8 (552-586)||(30925652-30925686)
chr8 (548-586)||(40413347-40413385)
chr8 (548-582)||(41159890-41159924)
chr8 (532-586)||(42768120-42768174)
chr8 (532-581)||(157075-157124)
chr8 (548-581)||(2730963-2730996)
chr8 (548-581)||(3270881-3270914)
chr8 (548-581)||(6440117-6440150)
chr8 (532-581)||(7325734-7325783)
chr8 (468-525)||(7472969-7473025)
chr8 (548-581)||(25830248-25830281)
chr8 (552-581)||(34996363-34996392)
chr8 (548-581)||(35067196-35067229)
chr8 (548-581)||(43285965-43285998)
chr8 (548-581)||(43715910-43715943)
chr8 (548-581)||(44061753-44061786)
chr8 (541-581)||(9550410-9550450)
chr8 (426-486)||(10692470-10692529)
chr8 (546-586)||(11879488-11879528)
chr8 (546-586)||(11896904-11896944)
chr8 (541-581)||(12659080-12659120)
chr8 (548-580)||(33100472-33100504)
chr8 (546-582)||(37210051-37210087)
chr8 (457-521)||(38675665-38675728)
chr8 (546-586)||(40102056-40102096)
chr8 (552-580)||(42569732-42569760)
chr8 (546-582)||(42768239-42768275)
chr8 (546-586)||(45101429-45101469)
[»] chr5 (55 HSPs)
chr5 (532-586)||(33567221-33567275)
chr5 (423-525)||(21012597-21012695)
chr5 (423-525)||(20770160-20770260)
chr5 (532-578)||(6865793-6865839)
chr5 (423-525)||(13309911-13310011)
chr5 (532-586)||(29227725-29227779)
chr5 (424-510)||(41321284-41321369)
chr5 (532-581)||(13734363-13734412)
chr5 (533-581)||(2117627-2117675)
chr5 (426-525)||(33598994-33599090)
chr5 (532-586)||(14206408-14206462)
chr5 (548-582)||(39628825-39628859)
chr5 (548-581)||(1079955-1079988)
chr5 (532-581)||(8725425-8725474)
chr5 (548-581)||(26686917-26686950)
chr5 (548-581)||(26956648-26956681)
chr5 (534-586)||(4835027-4835079)
chr5 (424-508)||(6758749-6758832)
chr5 (429-525)||(10865352-10865447)
chr5 (532-584)||(21210838-21210890)
chr5 (546-586)||(34381045-34381085)
chr5 (426-510)||(36563009-36563091)
chr5 (535-578)||(372726-372769)
chr5 (426-525)||(6940092-6940189)
chr5 (548-582)||(1839346-1839380)
chr5 (548-586)||(16202755-16202793)
chr5 (548-582)||(19839987-19840021)
chr5 (548-582)||(20770167-20770201)
chr5 (535-581)||(32682132-32682178)
chr5 (532-586)||(39458676-39458730)
chr5 (548-582)||(41175707-41175741)
chr5 (548-581)||(611900-611933)
chr5 (424-525)||(1079895-1079994)
chr5 (426-510)||(2972354-2972438)
chr5 (423-508)||(4719679-4719763)
chr5 (552-581)||(10232538-10232567)
chr5 (548-581)||(13309918-13309951)
chr5 (548-581)||(22098291-22098324)
chr5 (532-581)||(31284397-31284446)
chr5 (532-581)||(33910091-33910140)
chr5 (468-525)||(34124693-34124750)
chr5 (548-580)||(189706-189738)
chr5 (423-507)||(1274386-1274469)
chr5 (532-576)||(4098631-4098675)
chr5 (541-581)||(6046341-6046381)
chr5 (548-580)||(6446521-6446553)
chr5 (548-580)||(6517748-6517780)
chr5 (429-525)||(9581614-9581708)
chr5 (429-525)||(15952987-15953081)
chr5 (548-580)||(19481185-19481217)
chr5 (546-582)||(21023331-21023367)
chr5 (423-487)||(27546092-27546155)
chr5 (549-581)||(36738984-36739016)
chr5 (546-586)||(39595305-39595345)
chr5 (546-586)||(40223783-40223823)
[»] chr2 (71 HSPs)
chr2 (532-581)||(8482235-8482284)
chr2 (423-525)||(15269890-15269990)
chr2 (532-581)||(7121398-7121447)
chr2 (429-525)||(5054643-5054737)
chr2 (426-521)||(18876867-18876961)
chr2 (532-586)||(25801811-25801865)
chr2 (423-525)||(25881573-25881673)
chr2 (532-586)||(29795455-29795509)
chr2 (423-525)||(39213712-39213812)
chr2 (532-581)||(10472150-10472199)
chr2 (468-525)||(10711796-10711853)
chr2 (548-581)||(18737876-18737909)
chr2 (532-581)||(19695694-19695743)
chr2 (456-525)||(42430710-42430778)
chr2 (448-509)||(44977457-44977518)
chr2 (532-581)||(45202135-45202184)
chr2 (546-586)||(13711094-13711134)
chr2 (424-508)||(14328411-14328494)
chr2 (429-525)||(14891031-14891126)
chr2 (448-508)||(34215317-34215377)
chr2 (532-580)||(42081056-42081104)
chr2 (426-510)||(43487410-43487493)
chr2 (448-511)||(2131479-2131542)
chr2 (430-521)||(17395022-17395111)
chr2 (466-521)||(24562963-24563018)
chr2 (426-525)||(36517228-36517325)
chr2 (548-582)||(9207625-9207659)
chr2 (424-508)||(12070879-12070960)
chr2 (532-578)||(12191966-12192012)
chr2 (548-578)||(18876927-18876957)
chr2 (539-581)||(23344992-23345034)
chr2 (548-582)||(23352906-23352940)
chr2 (548-582)||(25881580-25881614)
chr2 (532-586)||(28013975-28014029)
chr2 (423-525)||(28245757-28245856)
chr2 (548-582)||(28245764-28245798)
chr2 (532-578)||(37966375-37966421)
chr2 (428-486)||(38911910-38911967)
chr2 (532-581)||(4138188-4138237)
chr2 (468-525)||(7664009-7664065)
chr2 (468-525)||(9377528-9377585)
chr2 (548-581)||(9760053-9760086)
chr2 (548-581)||(12600083-12600116)
chr2 (532-581)||(14891092-14891141)
chr2 (548-581)||(18254212-18254245)
chr2 (532-581)||(22353178-22353227)
chr2 (532-581)||(24727434-24727483)
chr2 (548-581)||(29349541-29349574)
chr2 (422-511)||(31578462-31578550)
chr2 (552-581)||(36376852-36376881)
chr2 (548-581)||(36774574-36774607)
chr2 (548-581)||(40210070-40210103)
chr2 (544-581)||(40496381-40496418)
chr2 (532-581)||(42283253-42283302)
chr2 (456-525)||(42372540-42372609)
chr2 (532-581)||(43725224-43725273)
chr2 (426-486)||(1907744-1907803)
chr2 (548-580)||(6999071-6999103)
chr2 (546-586)||(7086122-7086162)
chr2 (548-580)||(9377492-9377524)
chr2 (479-511)||(14794959-14794991)
chr2 (548-580)||(15269897-15269929)
chr2 (546-586)||(19913825-19913865)
chr2 (548-580)||(22888825-22888857)
chr2 (546-586)||(23045123-23045163)
chr2 (546-586)||(23880128-23880168)
chr2 (546-582)||(30996761-30996797)
chr2 (548-584)||(31578470-31578506)
chr2 (541-581)||(31635813-31635853)
chr2 (548-584)||(37003646-37003682)
chr2 (541-581)||(41868372-41868412)
[»] chr6 (39 HSPs)
chr6 (424-510)||(5694108-5694193)
chr6 (423-525)||(32459458-32459559)
chr6 (456-525)||(26595409-26595477)
chr6 (460-525)||(29180574-29180639)
chr6 (531-571)||(32149507-32149547)
chr6 (532-578)||(12441546-12441592)
chr6 (548-581)||(8505776-8505809)
chr6 (424-525)||(13422998-13423097)
chr6 (468-525)||(30621811-30621868)
chr6 (546-586)||(8395375-8395415)
chr6 (429-525)||(14699606-14699700)
chr6 (456-525)||(25127773-25127843)
chr6 (548-580)||(32459520-32459552)
chr6 (546-586)||(32853142-32853182)
chr6 (548-579)||(11635539-11635570)
chr6 (532-586)||(1196066-1196120)
chr6 (548-582)||(2689065-2689099)
chr6 (531-581)||(2717992-2718042)
chr6 (548-582)||(15318189-15318223)
chr6 (423-525)||(24979961-24980063)
chr6 (532-578)||(25338083-25338129)
chr6 (468-525)||(754380-754437)
chr6 (548-581)||(5522640-5522673)
chr6 (548-581)||(8645344-8645377)
chr6 (548-581)||(13423004-13423037)
chr6 (548-581)||(15974643-15974676)
chr6 (423-506)||(24900804-24900884)
chr6 (548-581)||(25811841-25811874)
chr6 (548-581)||(28630134-28630167)
chr6 (532-581)||(32644631-32644680)
chr6 (548-581)||(34047422-34047455)
chr6 (468-525)||(35213503-35213560)
chr6 (548-580)||(2242025-2242057)
chr6 (533-581)||(12177586-12177634)
chr6 (541-581)||(14094939-14094979)
chr6 (548-580)||(18141304-18141336)
chr6 (548-580)||(20822871-20822903)
chr6 (456-508)||(22079522-22079574)
chr6 (546-586)||(29383590-29383630)
[»] chr3 (75 HSPs)
chr3 (532-586)||(35554113-35554167)
chr3 (532-586)||(43169751-43169805)
chr3 (424-530)||(45186489-45186593)
chr3 (546-586)||(23585148-23585188)
chr3 (546-586)||(23599971-23600011)
chr3 (426-525)||(24095348-24095445)
chr3 (423-510)||(42358595-42358681)
chr3 (532-579)||(47683809-47683856)
chr3 (532-582)||(31997821-31997871)
chr3 (424-510)||(36670971-36671056)
chr3 (460-510)||(51982163-51982213)
chr3 (548-581)||(26550273-26550306)
chr3 (548-581)||(33939271-33939304)
chr3 (548-580)||(26772404-26772436)
chr3 (546-586)||(32457753-32457793)
chr3 (548-580)||(37302581-37302613)
chr3 (456-508)||(44813406-44813458)
chr3 (422-525)||(13348077-13348178)
chr3 (429-508)||(28700495-28700573)
chr3 (531-578)||(28884498-28884545)
chr3 (531-586)||(52431198-52431253)
chr3 (456-507)||(54195400-54195451)
chr3 (548-582)||(288761-288795)
chr3 (448-510)||(1796002-1796064)
chr3 (532-570)||(3483140-3483178)
chr3 (548-582)||(5244264-5244298)
chr3 (423-509)||(6178383-6178468)
chr3 (548-582)||(20080109-20080143)
chr3 (548-582)||(24095407-24095441)
chr3 (423-525)||(46019491-46019591)
chr3 (548-582)||(49417611-49417645)
chr3 (548-582)||(49761343-49761377)
chr3 (456-510)||(50314685-50314739)
chr3 (460-521)||(9311105-9311165)
chr3 (548-581)||(9692761-9692794)
chr3 (548-581)||(14207260-14207293)
chr3 (548-581)||(14215008-14215041)
chr3 (548-581)||(19150321-19150354)
chr3 (548-581)||(26014847-26014880)
chr3 (548-581)||(29917026-29917059)
chr3 (548-581)||(29966179-29966212)
chr3 (548-581)||(32924271-32924304)
chr3 (532-581)||(36318285-36318334)
chr3 (448-525)||(37057000-37057076)
chr3 (548-581)||(38926663-38926696)
chr3 (548-581)||(41505526-41505559)
chr3 (548-581)||(42358641-42358674)
chr3 (548-581)||(44413923-44413956)
chr3 (548-581)||(45293031-45293064)
chr3 (468-525)||(46253694-46253751)
chr3 (548-581)||(46623942-46623975)
chr3 (532-581)||(46952957-46953006)
chr3 (532-581)||(48490516-48490565)
chr3 (541-586)||(48649608-48649653)
chr3 (456-525)||(55322659-55322727)
chr3 (554-582)||(3347123-3347151)
chr3 (548-580)||(3953478-3953510)
chr3 (546-586)||(6126487-6126527)
chr3 (546-586)||(9027906-9027946)
chr3 (456-521)||(9719396-9719463)
chr3 (541-577)||(11335309-11335345)
chr3 (548-580)||(16479667-16479699)
chr3 (548-584)||(27168681-27168717)
chr3 (546-586)||(33007393-33007433)
chr3 (546-586)||(37303072-37303112)
chr3 (546-586)||(37303416-37303456)
chr3 (548-580)||(37894246-37894278)
chr3 (546-586)||(39540268-39540308)
chr3 (426-482)||(42672819-42672874)
chr3 (548-580)||(46019498-46019530)
chr3 (541-581)||(47988488-47988528)
chr3 (541-581)||(47997775-47997815)
chr3 (541-581)||(48007062-48007102)
chr3 (546-586)||(49196729-49196769)
chr3 (548-580)||(55400035-55400067)
[»] scaffold0054 (1 HSPs)
scaffold0054 (532-586)||(31598-31652)
[»] scaffold0003 (2 HSPs)
scaffold0003 (548-581)||(366329-366362)
scaffold0003 (546-586)||(119866-119906)
[»] scaffold0041 (1 HSPs)
scaffold0041 (546-586)||(34441-34481)
[»] scaffold0532 (1 HSPs)
scaffold0532 (548-582)||(11000-11034)
[»] scaffold0155 (1 HSPs)
scaffold0155 (532-578)||(3277-3323)
[»] scaffold0136 (1 HSPs)
scaffold0136 (423-525)||(38454-38554)
[»] scaffold0184 (1 HSPs)
scaffold0184 (548-581)||(16790-16823)
[»] scaffold0128 (1 HSPs)
scaffold0128 (548-581)||(10972-11005)
[»] scaffold0078 (1 HSPs)
scaffold0078 (548-581)||(56021-56054)
[»] scaffold0010 (1 HSPs)
scaffold0010 (468-525)||(134245-134302)
[»] scaffold0519 (1 HSPs)
scaffold0519 (548-584)||(11816-11852)
[»] scaffold0060 (1 HSPs)
scaffold0060 (546-586)||(6850-6890)


Alignment Details
Target: chr1 (Bit Score: 373; Significance: 0; HSPs: 99)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 78 - 525
Target Start/End: Original strand, 33173182 - 33173635
Alignment:
Q  78 gcttacaacaagagttcaaatcacatttccaattttcaacaaagcatcaaactgaatannnnnnnaactgtatcaaaccgaatcactaatatctacaata 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  33173182 gcttacaacaagagttcaaatcacatttccaattttcaacaaagcatcaaactgaatatttttttaactgtatcaaaccgaatcactaatatctacaata 33173281  T
Q  178 ttcatcaaacttatttaacactaaaaacatcacgagctagcctttgaaacccatcaaactgaatcatccatcaatcactacaaaattcatcatgacttgc 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33173282 ttcatcaaacttatttaacactaaaaacatcacgagctagcctttgaaacccatcaaactgaatcatccatcaatcactacaaaattcatcatgacttgc 33173381  T
Q  278 accaaactgcatccctcctcaataaacaatctcactgattattccaactgtgcctcaaccactcggcaaccactccatgacagcagcaccaattcataaa 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33173382 accaaactgcatccctcctcaataaacaatctcactgattattccaactgtgcctcaaccactcggcaaccactccatgacagcagcaccaattcataaa 33173481  T
Q  378 cacacccggccattcaacaatgaaaaagatttattgattcaaaaa---gacaatttttgtgacaactttattttctcatgttcac---attatgtcttta 471  Q
    |||||||||||||||||||||||||||||||||||| ||||||||   ||| ||||||||||||||||| ||||| ||| || ||   ||||||||||||    
T  33173482 cacacccggccattcaacaatgaaaaagatttattggttcaaaaacgtgaccatttttgtgacaactttcttttcacatatttacaatattatgtcttta 33173581  T
Q  472 ctttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33173582 ctttatctctctattcctttagttttcgtgtcaatacctaccttttctttgtaa 33173635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 422 - 525
Target Start/End: Complemental strand, 51436815 - 51436713
Alignment:
Q  422 agacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttcttt 521  Q
    |||||||||||||||||||||||| | |||||  ||||||| ||| |||||||| ||||| ||||  ||| |||||| ||||||||||||| ||||||||    
T  51436815 agacaatttttgtgacaactttatct-ctcatactcacattttgtttttactttatctctttattgttttggttttcatgtcaatacctactttttcttt 51436717  T
Q  522 gtaa 525  Q
    ||||    
T  51436716 gtaa 51436713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 33173107 - 33173157
Alignment:
Q  18 atttgaagcctgttgtaatatatgacgatggtgttgttaaattagcttctt 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33173107 atttgcagcctgttgtaatatatgacgatggtgttgttaaattagcttctt 33173157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 532 - 584
Target Start/End: Complemental strand, 5477215 - 5477163
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattct 584  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  5477215 atatttgtacaaccactttgtgacaactttctctctcatactcacattattct 5477163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 423 - 525
Target Start/End: Original strand, 47721438 - 47721538
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||| ||||||||||||||| | | ||||| |||||||||| | |||||||| |||||||||| ||||  ||||||||||||||| ||| |||||||||    
T  47721438 gacaacttttgtgacaactttctgt-ctcatattcacattattt-tttactttatctctctattgctttgattttcgtgtcaatacttactttttctttg 47721535  T
Q  523 taa 525  Q
    |||    
T  47721536 taa 47721538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 423 - 525
Target Start/End: Original strand, 47728430 - 47728530
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||| ||||||||||||||| | | ||||| |||||||||| | |||||||| |||||||||| ||||  ||||||||||||||| ||| |||||||||    
T  47728430 gacaacttttgtgacaactttctgt-ctcatattcacattattt-tttactttatctctctattgctttgattttcgtgtcaatacttactttttctttg 47728527  T
Q  523 taa 525  Q
    |||    
T  47728528 taa 47728530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 532 - 582
Target Start/End: Original strand, 51571423 - 51571473
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattatt 582  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  51571423 atatttgtacaaccactttttgacaactttctctctcatattcacattatt 51571473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 49453499 - 49453548
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  49453499 atatttgtacaaccactttgtgacaactttctctctcatactcacattat 49453548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 48261168 - 48261254
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacct 510  Q
    ||||| |||||||||||| ||||||| ||||  ||||||||||| |||||||| |||||||||| |||| ||||| ||| ||||||||    
T  48261168 gacaacttttgtgacaaccttatttt-tcatactcacattatgtttttactttctctctctattgctttggtttttgtgccaatacct 48261254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 423 - 505
Target Start/End: Complemental strand, 50775199 - 50775118
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaa 505  Q
    ||||||||||||||||||||| | | |||||  ||||||||||| |||||||| |||||||||| |||| ||||| |||||||    
T  50775199 gacaatttttgtgacaactttctct-ctcatactcacattatgtttttactttatctctctattgctttggtttttgtgtcaa 50775118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 14983792 - 14983841
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  14983792 atatttgtacaaccactttttaacaactttctctctcatattcacattat 14983841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 40596106 - 40596057
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||| |||||||||||||||||||||||| |||||||||    
T  40596106 atatttgtacaaccattttgtgacaactttctctctcatactcacattat 40596057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 41507246 - 41507197
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||| |||||||||||||||||||||||| |||||||||    
T  41507246 atatttgtacaaccattttgtgacaactttctctctcatactcacattat 41507197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 45272212 - 45272163
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  45272212 atatttgtacaaccactttttgacaactttctctctcatactcacattat 45272163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 50824813 - 50824870
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||| |||||||||| |||| |||||| ||||||||||||| ||||||||||||    
T  50824813 tttactttatctctctattgctttggttttcatgtcaatacctactttttctttgtaa 50824870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 429 - 525
Target Start/End: Complemental strand, 41507231 - 41507136
Alignment:
Q  429 ttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||||||||| | | |||||  |||||||||||  ||||||| ||| ||||||  ||| |||||| ||||||||||||| ||||||||||||    
T  41507231 ttttgtgacaactttctct-ctcatactcacattatgttcttactttatctatctattattttggttttcatgtcaatacctactttttctttgtaa 41507136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 448 - 507
Target Start/End: Original strand, 14983825 - 14983884
Alignment:
Q  448 tctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaata 507  Q
    |||||| |||||||||||| |||||||| ||||||||||  ||||||||| |||||||||    
T  14983825 tctcatattcacattatgtttttactttctctctctattgttttagtttttgtgtcaata 14983884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 269 - 312
Target Start/End: Original strand, 33153189 - 33153232
Alignment:
Q  269 atgacttgcaccaaactgcatccctcctcaataaacaatctcac 312  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||    
T  33153189 atgacttgctccaaactgcatccctcctcaataaacattctcac 33153232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 532 - 579
Target Start/End: Complemental strand, 44518013 - 44517966
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacatt 579  Q
    |||||||||||| || |||||||||| |||||||||||||||||||||    
T  44518013 atatttgtataatcattttgtgacaattttctctctcatattcacatt 44517966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 509
Target Start/End: Complemental strand, 9567003 - 9566918
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacc 509  Q
    ||||| ||||||||||||||| | | |||||  ||||||||||| |||||||| || ||||||| |||| ||||| |||||||||||    
T  9567003 gacaacttttgtgacaactttctct-ctcatactcacattatgtttttactttctcactctattgctttggtttttgtgtcaatacc 9566918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 29293967 - 29294021
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| ||| ||||| |||||||||||||||||||| ||||||||| ||||    
T  29293967 atatttgtacaactactttatgacaactttctctctcatagtcacattatactct 29294021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 547 - 581
Target Start/End: Original strand, 32960383 - 32960417
Alignment:
Q  547 ctttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||||||||||||||    
T  32960383 ctttgtgacaactttctctctcatattcacattat 32960417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 37690437 - 37690491
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| || |||||| |||||| ||||||||||||| ||||||||||||||    
T  37690437 atatttgtacaatcactttatgacaattttctctctcatactcacattattctct 37690491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 544 - 582
Target Start/End: Complemental strand, 49241544 - 49241506
Alignment:
Q  544 ccactttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  49241544 ccactttgtgacaactttctctctcatactcacattatt 49241506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 27687571 - 27687522
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||| |||||||||||||| ||||||||| |||||||||    
T  27687571 atatttgtacaaccattttgtgacaactttatctctcatactcacattat 27687522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 40139134 - 40139183
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||||||||    
T  40139134 atatttgtacaaccattttatgacaactttctctctcatactcacattat 40139183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 49570032 - 49570065
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||||||||||||||    
T  49570032 tttgtgacaactttctctctcatattcacattat 49570065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 49931589 - 49931622
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||||||||||||||    
T  49931589 tttgtgacaactttctctctcatattcacattat 49931622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 18541094 - 18541054
Alignment:
Q  541 taaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||| ||||| ||||||||||||||||||||||||||||||    
T  18541094 taacaactttttgacaactttctctctcatattcacattat 18541054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 546 - 582
Target Start/End: Original strand, 29154814 - 29154850
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||||| ||||||||||    
T  29154814 actttgtgacaactttctctctcatactcacattatt 29154850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 456 - 512
Target Start/End: Original strand, 31433551 - 31433606
Alignment:
Q  456 tcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctac 512  Q
    ||||||||||| |||| ||| ||||||||||  ||||||||||||||||||||||||    
T  31433551 tcacattatgttttta-tttatctctctattattttagttttcgtgtcaatacctac 31433606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 546 - 586
Target Start/End: Complemental strand, 37843470 - 37843430
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    |||||||||||||||||||||||||| ||||||||| ||||    
T  37843470 actttgtgacaactttctctctcatactcacattatactct 37843430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 546 - 586
Target Start/End: Complemental strand, 50141973 - 50141933
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||||||||    
T  50141973 actttttgacaactttctctctcatactcacattattctct 50141933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 525
Target Start/End: Complemental strand, 49065406 - 49065307
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    |||||| ||||||||||||||  ||||  ||  ||||||||||| |||||||| |||||||||| |||| ||||| ||| ||||| || | |||||||||    
T  49065406 gacaatatttgtgacaacttttctttc--atactcacattatgtttttactttctctctctattgctttggtttttgtgccaata-cttcattttctttg 49065310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 6143715 - 6143753
Alignment:
Q  544 ccactttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  6143715 ccactttgtgacaactttctctctcatacttacattatt 6143753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 8200111 - 8200145
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  8200111 tttgtgacaactttctctctcatactcacattatt 8200145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 525
Target Start/End: Original strand, 13489691 - 13489791
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||| ||||||||||||||| | | |||||  ||||||||  | |||||||| |||||||||| |||| |||||||||  |||||| || |||||||||    
T  13489691 gacaacttttgtgacaactttctct-ctcatactcacattactt-tttactttatctctctattgctttggttttcgtgcaaataccaactttttctttg 13489788  T
Q  523 taa 525  Q
    |||    
T  13489789 taa 13489791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 26967246 - 26967280
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||| ||||||||||||    
T  26967246 tttgtgacaactttctctctcacattcacattatt 26967280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 33358194 - 33358160
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  33358194 tttgtgacaactttctctctcatactcacattatt 33358160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 38713606 - 38713640
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||||||| ||||||    
T  38713606 tttgtgacaactttctctctcatattcatattatt 38713640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 497
Target Start/End: Original strand, 40680814 - 40680887
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagtttt 497  Q
    |||||||||| ||||||||||| ||||||||  ||||||||||| ||||| || ||||| |||| |||| |||||    
T  40680814 gacaatttttatgacaacttta-tttctcatactcacattatgtttttaccttctctctatattactttggtttt 40680887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 525
Target Start/End: Complemental strand, 40699875 - 40699779
Alignment:
Q  427 atttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||||||| ||||| | ||||| ||||  |||| | |||||||| ||||||| || ||||| ||||||||||||||| ||  ||||||||||||    
T  40699875 atttttgtgacaattttatct-ctcatattcaagttatat-tttactttatctctctgttgctttaattttcgtgtcaatacatatattttctttgtaa 40699779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 47214244 - 47214278
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  47214244 tttgtgacaactttctctctcatactcacattatt 47214278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 47721445 - 47721479
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||| ||||||||||||||||||    
T  47721445 tttgtgacaactttctgtctcatattcacattatt 47721479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 47728437 - 47728471
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||| ||||||||||||||||||    
T  47728437 tttgtgacaactttctgtctcatattcacattatt 47728471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 48220179 - 48220145
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  48220179 tttgtgacaactttctctctcatactcacattatt 48220145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 49559234 - 49559200
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||||| ||||||||    
T  49559234 tttgtgacaactttctctctcatatttacattatt 49559200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 578
Target Start/End: Original strand, 50797799 - 50797845
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacat 578  Q
    ||||||||| || || |||||||||||||||||||||||| ||||||    
T  50797799 atatttgtacaatcattttgtgacaactttctctctcatactcacat 50797845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 51286402 - 51286368
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  51286402 tttgtgacaactttctctctcatactcacattatt 51286368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 52267239 - 52267273
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  52267239 tttgtgacaactttctctctcatactcacattatt 52267273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 521
Target Start/End: Original strand, 52362511 - 52362607
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttcttt 521  Q
    ||||| |||||||||||||||  | ||||||  ||||||||| | |||||||| |||||||||| |||| |||||||||  |||||| || ||||||||    
T  52362511 gacaacttttgtgacaacttt-ctctctcatactcacattat-tttttactttatctctctattgctttggttttcgtgcaaataccaactttttcttt 52362607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 52362518 - 52362552
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  52362518 tttgtgacaactttctctctcatactcacattatt 52362552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 649804 - 649837
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  649804 tttgtgacaactttctctctcatactcacattat 649837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 552 - 581
Target Start/End: Original strand, 1156518 - 1156547
Alignment:
Q  552 tgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||||||||||    
T  1156518 tgacaactttctctctcatattcacattat 1156547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 1689427 - 1689460
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  1689427 tttgtgacaactttctctctcatactcacattat 1689460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 3851193 - 3851226
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  3851193 tttgtgacaactttctctctcatactcacattat 3851226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 4637944 - 4637993
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||| ||||| |||||||||||||| ||||| |||||||    
T  4637944 atatttgtacaaccattttgtaacaactttctctcttatatttacattat 4637993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 5771783 - 5771750
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  5771783 tttgtgacaactttctctctcatactcacattat 5771750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 5975568 - 5975605
Alignment:
Q  544 ccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  5975568 ccactttttgacaactttctctctcatactcacattat 5975605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 9566996 - 9566963
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  9566996 tttgtgacaactttctctctcatactcacattat 9566963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 525
Target Start/End: Original strand, 11597697 - 11597765
Alignment:
Q  456 tcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||||| |||||||| ||||||||||  ||| |||||||||  |||| ||| |||||||||||||    
T  11597697 tcacattatgtttttactttctctctctattgttttggttttcgtgctaatatcta-cttttctttgtaa 11597765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 552 - 581
Target Start/End: Complemental strand, 12489613 - 12489584
Alignment:
Q  552 tgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||||||||||    
T  12489613 tgacaactttctctctcatattcacattat 12489584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 561
Target Start/End: Original strand, 15061853 - 15061882
Alignment:
Q  532 atatttgtataaccactttgtgacaacttt 561  Q
    ||||||||||||||||||||||||||||||    
T  15061853 atatttgtataaccactttgtgacaacttt 15061882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 15466766 - 15466815
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| | ||||||||| |||||||| |||| ||||||||||||||    
T  15466766 atatttgtacatccactttgtaacaactttatctcacatattcacattat 15466815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 16836167 - 16836118
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| || || |||||||||||||| ||||||||| |||||||||    
T  16836167 atatttgtacaatcattttgtgacaactttttctctcatactcacattat 16836118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 582
Target Start/End: Original strand, 16986975 - 16987008
Alignment:
Q  549 ttgtgacaactttctctctcatattcacattatt 582  Q
    ||||||||||||||||||||||| ||||||||||    
T  16986975 ttgtgacaactttctctctcatactcacattatt 16987008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 18434830 - 18434863
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||| |||||||||||    
T  18434830 tttgtgacaactttctctctcacattcacattat 18434863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 29264023 - 29264072
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||||||| |||||||||||| ||||||| | |||||||    
T  29264023 atatttgtacaaccactttatgacaactttctttctcatacttacattat 29264072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 30536027 - 30536060
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  30536027 tttgtgacaactttctctctcatactcacattat 30536060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 37619579 - 37619612
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  37619579 tttgtgacaactttctctctcatactcacattat 37619612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 37685366 - 37685399
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  37685366 tttgtgacaactttctctctcatactcacattat 37685399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 37700152 - 37700119
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  37700152 tttgtgacaactttctctctcatactcacattat 37700119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 41558012 - 41558061
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||| ||||||||||||  |||||||||| |||||||||    
T  41558012 atatttgtacaaccattttgtgacaactcactctctcatactcacattat 41558061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 42539426 - 42539475
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||| | |||||||||||||||||||| | |||||||||    
T  42539426 atatttgtacaaccattatgtgacaactttctctctcagactcacattat 42539475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 44723396 - 44723429
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||||||||| ||||    
T  44723396 tttgtgacaactttctctctcatattcacgttat 44723429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 552 - 581
Target Start/End: Complemental strand, 45470872 - 45470843
Alignment:
Q  552 tgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||||||||||    
T  45470872 tgacaactttctctctcatattcacattat 45470843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 46903489 - 46903538
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||| ||||  |||||||||||||||||| |||||||||    
T  46903489 atatttgtacaaccattttgatacaactttctctctcatactcacattat 46903538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 47642642 - 47642609
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  47642642 tttgtgacaactttctctctcatactcacattat 47642609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 48256928 - 48256975
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||||||||||    
T  48256928 atatttgtacaacca-tttgt-acaactttctctctcatattcacattat 48256975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 48858859 - 48858892
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  48858859 tttgtgacaactttctctctcatactcacattat 48858892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 50154029 - 50153980
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||| |||||||| | |||||||||| ||| |||||||||||||||||||    
T  50154029 atatgtgtataactaatttgtgacaattttttctctcatattcacattat 50153980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Complemental strand, 50328140 - 50328083
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||| |||||||||| |||| |||||||||  |||||| || ||||||||||||    
T  50328140 tttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaa 50328083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 50775192 - 50775159
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  50775192 tttgtgacaactttctctctcatactcacattat 50775159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 51571741 - 51571708
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||| |||||||||||||||||||    
T  51571741 tttgtgacaactttttctctcatattcacattat 51571708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 52437530 - 52437563
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  52437530 tttgtgacaactttctctctcatactcacattat 52437563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 366690 - 366730
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  366690 actttttgacaactttctctctcatactcacattatactct 366730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 531 - 571
Target Start/End: Original strand, 1690453 - 1690493
Alignment:
Q  531 aatatttgtataaccactttgtgacaactttctctctcata 571  Q
    |||||||||| ||||| |||||||||||||| |||||||||    
T  1690453 aatatttgtacaaccattttgtgacaactttttctctcata 1690493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 584
Target Start/End: Original strand, 4213108 - 4213144
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattattct 584  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  4213108 tttgtgacaactttctctctcatactcacattgttct 4213144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 8828158 - 8828126
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||||| ||||||    
T  8828158 tttgtgacaactttctctctcatatttacatta 8828126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 10890081 - 10890049
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  10890081 tttgtgacaactttctctctcatactcacatta 10890049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Original strand, 13489698 - 13489730
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  13489698 tttgtgacaactttctctctcatactcacatta 13489730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 15705097 - 15705065
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  15705097 tttgtgacaactttctctctcatactcacatta 15705065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 584
Target Start/End: Complemental strand, 17082778 - 17082742
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattattct 584  Q
    ||||||||||||||||||||||||  |||||||||||    
T  17082778 tttgtgacaactttctctctcatacacacattattct 17082742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 525
Target Start/End: Original strand, 18336181 - 18336275
Alignment:
Q  429 ttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||||||||| | | |||||  |||||||| || |||||||| |||||||||| ||||  |||| |||   |||||||||||||||||||||    
T  18336181 ttttgtgacaactttctct-ctcatactcacatta-gtttttactttatctctctattgctttgatttttgtgcagatacctaccttttctttgtaa 18336275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Original strand, 18336182 - 18336214
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  18336182 tttgtgacaactttctctctcatactcacatta 18336214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 510
Target Start/End: Complemental strand, 18512348 - 18512300
Alignment:
Q  462 tatgtctttactttgtctctctatttctttagttttcgtgtcaatacct 510  Q
    ||||| |||||||| |||||||||| ||||||||||  |||||||||||    
T  18512348 tatgtttttactttatctctctattgctttagtttttatgtcaatacct 18512300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 32915107 - 32915075
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  32915107 tttgtgacaactttctctctcatactcacatta 32915075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 39010847 - 39010887
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  39010847 actttttgacaactttctctctcatactcacattatcctct 39010887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 50154013 - 50153938
Alignment:
Q  430 tttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaat 506  Q
    |||||||||| ||| || |||||| |||||||||||| |||||||| | |||  ||| || ||||||||||||||||    
T  50154013 tttgtgacaatttt-ttctctcatattcacattatgtttttactttctttcttcattactctagttttcgtgtcaat 50153938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 6e-20; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 423 - 525
Target Start/End: Original strand, 52895256 - 52895357
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||||||||||||||||||||| | |||||  ||||||||||| |||| ||| |||||||||| ||||  |||||||||||||| |||| |||||||||    
T  52895256 gacaatttttgtgacaactttatct-ctcataatcacattatgtttttattttatctctctattgctttgattttcgtgtcaatatctacattttctttg 52895354  T
Q  523 taa 525  Q
    |||    
T  52895355 taa 52895357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 423 - 525
Target Start/End: Complemental strand, 28458419 - 28458319
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||| ||||||||||||||| | | |||||  ||||||||| | |||||||| |||||||||| ||||  ||||||||||||||||||| |||||||||    
T  28458419 gacaacttttgtgacaactttctct-ctcatactcacattattt-tttactttatctctctattgctttgattttcgtgtcaatacctactttttctttg 28458322  T
Q  523 taa 525  Q
    |||    
T  28458321 taa 28458319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 46173558 - 46173612
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  46173558 atatttgtacaaccactttgtgacaactttctctctcgtactcacattattctct 46173612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 423 - 525
Target Start/End: Original strand, 2999141 - 2999241
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    |||||||||||||||||| |||| || |||| |||||||||| | |||||||| |||||||||| |||| |||||| ||  |||||| || |||||||||    
T  2999141 gacaatttttgtgacaacattatctt-tcatattcacattattt-tttactttatctctctattgctttggttttcatgcaaataccaactttttctttg 2999238  T
Q  523 taa 525  Q
    |||    
T  2999239 taa 2999241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 532 - 578
Target Start/End: Complemental strand, 32365719 - 32365673
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacat 578  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  32365719 atatttgtacaaccattttgtgacaactttctctctcatattcacat 32365673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 39241353 - 39241299
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||    
T  39241353 atatttgtacaaccaatttgtgacaactttctctctcatactcacattatcctct 39241299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 4511833 - 4511882
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||||||    
T  4511833 atatttgtataaccattttatgacaactttctctctcatactcacattat 4511882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 430 - 511
Target Start/End: Original strand, 5249904 - 5249984
Alignment:
Q  430 tttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaataccta 511  Q
    |||||||||||||| | | |||||  ||||||||||| |||||||| ||||||||||  ||| |||||||||||||||||||    
T  5249904 tttgtgacaactttctct-ctcatactcacattatgtttttactttctctctctattgttttggttttcgtgtcaataccta 5249984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 42490928 - 42490977
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  42490928 atatttgtacaaccactttttgacaactttctctctcatactcacattat 42490977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 48326560 - 48326609
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||||    
T  48326560 atatttgtacaaccactttgtgacaactttttctctcatactcacattat 48326609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 508
Target Start/End: Complemental strand, 31469030 - 31468947
Alignment:
Q  424 acaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatac 508  Q
    |||||||||||||||| ||| | | || ||| ||||||||| | |||||||| | |||||||| |||||||||||||||||||||    
T  31469030 acaatttttgtgacaattttctct-cttatgctcacattatatttttactttatttctctattactttagttttcgtgtcaatac 31468947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 424 - 510
Target Start/End: Complemental strand, 53801799 - 53801716
Alignment:
Q  424 acaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacct 510  Q
    |||| ||||||||||||||| |||| ||||  ||||||||| | ||||||||  ||||||||| |||||||||| ||||||||||||    
T  53801799 acaacttttgtgacaactttttttt-tcatactcacattatctttttacttt--ctctctattgctttagtttttgtgtcaatacct 53801716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 5234523 - 5234469
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| || |||||||||| |||||||||||||||| ||| ||||||||||    
T  5234523 atatttgtacaatcactttgtgataactttctctctcatactcatattattctct 5234469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 30778316 - 30778262
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| | ||| |||||||||||||||||||||||| ||||||||| ||||    
T  30778316 atatttgtacagccaatttgtgacaactttctctctcatactcacattatactct 30778262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 54036581 - 54036527
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| ||||| |||||||||||||| ||||||||| ||| ||||||||||    
T  54036581 atatttgtacaaccattttgtgacaactttatctctcatactcaaattattctct 54036527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 426 - 511
Target Start/End: Complemental strand, 149524 - 149440
Alignment:
Q  426 aatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaataccta 511  Q
    |||||||||||||||||| | | |||||  ||||||||||| |  ||||| |||||||||| |||||||||| |||||| ||||||    
T  149524 aatttttgtgacaactttctct-ctcatactcacattatgtttcaactttctctctctattgctttagtttttgtgtcactaccta 149440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 424 - 525
Target Start/End: Original strand, 27371170 - 27371269
Alignment:
Q  424 acaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgt 523  Q
    |||| ||||||||||||||| | || ||||  |||| |||||  |||||||| ||||||||||  || ||||||| |||||||||||| |||||||||||    
T  27371170 acaacttttgtgacaactttttatt-tcatactcacgttatgcttttactttctctctctattgtttgagttttcatgtcaataccta-cttttctttgt 27371267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 28676204 - 28676155
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||| |||||||||||||||||| ||||| |||||||||    
T  28676204 atatttgtacaaccattttgtgacaactttctctttcatactcacattat 28676155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 37060353 - 37060386
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||||||||||||||    
T  37060353 tttgtgacaactttctctctcatattcacattat 37060386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 424 - 525
Target Start/End: Complemental strand, 37514173 - 37514074
Alignment:
Q  424 acaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgt 523  Q
    |||| ||||||||||||||| | | |||||  |||||| |||| |||||||| |||||||||| ||||  |||||||| ||| |||||| ||||||||||    
T  37514173 acaacttttgtgacaactttctct-ctcatactcacat-atgtttttactttatctctctattgctttgattttcgtgccaaaacctactttttctttgt 37514076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 525
Target Start/End: Complemental strand, 49896665 - 49896608
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||| |||||||||| ||||  |||||||||||||||| || ||||||||||||    
T  49896665 tttactttatctctctattgctttgattttcgtgtcaataccaactttttctttgtaa 49896608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 521
Target Start/End: Complemental strand, 54802675 - 54802622
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctaccttttcttt 521  Q
    |||||||| |||||||||| ||||| ||||||||||||||||||  ||||||||    
T  54802675 tttactttatctctctattgctttaattttcgtgtcaatacctattttttcttt 54802622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 532 - 584
Target Start/End: Original strand, 5386392 - 5386444
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattct 584  Q
    ||||||| | ||||| ||| |||||||||||||||||||| ||||||||||||    
T  5386392 atatttgaacaaccattttttgacaactttctctctcatactcacattattct 5386444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 429 - 525
Target Start/End: Complemental strand, 28657477 - 28657383
Alignment:
Q  429 ttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||||||||| | | |||||  ||||||||| | |||||||| |||||||||| |||| |||| ||||  ||||||||| ||||||||||||    
T  28657477 ttttgtgacaactttctct-ctcatactcacattattt-tttactttatctctctattgctttggtttccgtgcaaatacctacgttttctttgtaa 28657383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 546 - 586
Target Start/End: Complemental strand, 38844528 - 38844488
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  38844528 actttttgacaactttctctcttatattcacattattctct 38844488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 548 - 584
Target Start/End: Original strand, 39158141 - 39158177
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattattct 584  Q
    |||||||||||||||||||||||| ||||||||||||    
T  39158141 tttgtgacaactttctctctcatactcacattattct 39158177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 532 - 568
Target Start/End: Complemental strand, 41119533 - 41119497
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctc 568  Q
    ||||||||| |||||||||||||||||||||||||||    
T  41119533 atatttgtacaaccactttgtgacaactttctctctc 41119497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 46911931 - 46911971
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||||||||    
T  46911931 actttttgacaactttctctctcatactcacattattctct 46911971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 548 - 579
Target Start/End: Complemental strand, 336843 - 336812
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatt 579  Q
    ||||||||||||||||||||||||||||||||    
T  336843 tttgtgacaactttctctctcatattcacatt 336812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 507
Target Start/End: Original strand, 23667931 - 23667990
Alignment:
Q  448 tctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaata 507  Q
    ||||||| ||||||||||| |||||||| | ||| ||||  |||||||||||||||||||    
T  23667931 tctcatgctcacattatgtttttactttctttctttattattttagttttcgtgtcaata 23667990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 525
Target Start/End: Original strand, 37997285 - 37997382
Alignment:
Q  424 acaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgt 523  Q
    |||| ||||||||||||||| |   |||||  ||||||||| | |||||||| |||||||||| ||||  |||| |||||||||||| | ||||||||||    
T  37997285 acaacttttgtgacaactttct---ctcatactcacattatctttttactttctctctctattgctttgatttttgtgtcaatacct-cattttctttgt 37997380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 1580334 - 1580281
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| ||| |||||||||||| ||||||||||||| ||||||||| ||||    
T  1580334 atatttgtacaac-actttgtgacaattttctctctcatactcacattatcctct 1580281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 28458412 - 28458378
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  28458412 tttgtgacaactttctctctcatactcacattatt 28458378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 28657476 - 28657442
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  28657476 tttgtgacaactttctctctcatactcacattatt 28657442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 30170055 - 30170021
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  30170055 tttgtgacaactttctctctcatactcacattatt 30170021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 552 - 586
Target Start/End: Original strand, 38952728 - 38952762
Alignment:
Q  552 tgacaactttctctctcatattcacattattctct 586  Q
    |||||||||||||||||||| ||||||||||||||    
T  38952728 tgacaactttctctctcatactcacattattctct 38952762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 40609646 - 40609680
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  40609646 tttgtgacaactttctctctcatactcacattatt 40609680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 43769747 - 43769781
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  43769747 tttgtgacaactttctctctcatactcacattatt 43769781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 552 - 586
Target Start/End: Original strand, 44165948 - 44165982
Alignment:
Q  552 tgacaactttctctctcatattcacattattctct 586  Q
    |||||||||||||||||||| ||||||||||||||    
T  44165948 tgacaactttctctctcatactcacattattctct 44165982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 149520 - 149487
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  149520 tttgtgacaactttctctctcatactcacattat 149487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 2268543 - 2268510
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  2268543 tttgtgacaactttctctctcatactcacattat 2268510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 2738303 - 2738270
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    ||||||| ||||||||||||||||||||||||||    
T  2738303 tttgtgataactttctctctcatattcacattat 2738270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 5249904 - 5249937
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  5249904 tttgtgacaactttctctctcatactcacattat 5249937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 5932799 - 5932766
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  5932799 tttgtgacaactttctctctcatactcacattat 5932766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 582
Target Start/End: Complemental strand, 6494927 - 6494894
Alignment:
Q  549 ttgtgacaactttctctctcatattcacattatt 582  Q
    ||||||||||||||||||||||||||| ||||||    
T  6494927 ttgtgacaactttctctctcatattcatattatt 6494894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 10250551 - 10250518
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  10250551 tttgtgacaactttctctctcatactcacattat 10250518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 525
Target Start/End: Original strand, 12138913 - 12138982
Alignment:
Q  456 tcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||| | |||||||| |||||||||| ||||  |||| |||  ||||||||| ||||||||||||    
T  12138913 tcacattatttttttactttatctctctattactttgatttttgtgcaaatacctactttttctttgtaa 12138982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 16214689 - 16214738
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||| ||||| |||| |||||||| |||||| |||||||    
T  16214689 atatttgtataaccattttgtcacaattttctctcccatatttacattat 16214738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 19232185 - 19232136
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||| ||| ||||||| |||||||||||| |||||||||    
T  19232185 atatttgtacaaccaatttttgacaaccttctctctcatactcacattat 19232136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 26440684 - 26440733
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| |||||||||||||||| ||| |||| |||| |||||||||    
T  26440684 atatttgtacaaccactttgtgacaattttatctcccatactcacattat 26440733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 27384195 - 27384244
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||| ||| | |||||||||||||||||||||| |||||    
T  27384195 atatttgtacaaccattttattacaactttctctctcatattcatattat 27384244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 28899267 - 28899218
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| || || ||||  ||||||||||||||||||||||||||||    
T  28899267 atatttgtacaatcattttggtacaactttctctctcatattcacattat 28899218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 37547073 - 37547106
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctct 565  Q
    ||||||||| ||||||||||||||||||||||||    
T  37547073 atatttgtacaaccactttgtgacaactttctct 37547106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 44257765 - 44257732
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  44257765 tttgtgacaactttctctctcatactcacattat 44257732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 45761280 - 45761247
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||||||| |||||    
T  45761280 tttgtgacaactttctctctcatattcatattat 45761247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 46686253 - 46686301
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||| ||||| |||||||||||||||||| |||||||||    
T  46686253 atatttgtacaaccattttgt-acaactttctctctcatactcacattat 46686301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 525
Target Start/End: Complemental strand, 50831766 - 50831698
Alignment:
Q  456 tcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||| ||||||||||||| |||||||||| ||||  |||| ||||||| |||| | ||||||||||||    
T  50831766 tcacatcatgtctttactttctctctctattgctttgatttttgtgtcaagacct-ctttttctttgtaa 50831698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 50890109 - 50890076
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  50890109 tttgtgacaactttctctctcatactcacattat 50890076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 595
Target Start/End: Complemental strand, 53583166 - 53583117
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctctgcttctcca 595  Q
    ||||| |||||||||||||||||||| ||||||||| ||||  |||||||    
T  53583166 actttttgacaactttctctctcatactcacattatcctcttattctcca 53583117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 56271432 - 56271489
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||| ||| |||||||||| |||| |||||||||  ||||||||| ||||||||||||    
T  56271432 tttattttatctctctattgctttggttttcgtgcaaatacctactttttctttgtaa 56271489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 423 - 491
Target Start/End: Complemental strand, 2738310 - 2738243
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttcttt 491  Q
    |||||||||||||| |||||| | | ||||| |||||||||| | | |||||| |||||||||||||||    
T  2738310 gacaatttttgtgataactttctct-ctcatattcacattatctttctactttctctctctatttcttt 2738243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 553 - 581
Target Start/End: Complemental strand, 5466526 - 5466498
Alignment:
Q  553 gacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||||||||    
T  5466526 gacaactttctctctcatattcacattat 5466498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 554 - 586
Target Start/End: Complemental strand, 7161555 - 7161523
Alignment:
Q  554 acaactttctctctcatattcacattattctct 586  Q
    |||||||||||||||||||||||||||| ||||    
T  7161555 acaactttctctctcatattcacattatactct 7161523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 12241086 - 12241126
Alignment:
Q  541 taaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||| ||||| |||||||||||||||||||| |||||||||    
T  12241086 taacaactttttgacaactttctctctcatactcacattat 12241126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 468 - 512
Target Start/End: Complemental strand, 12595629 - 12595585
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctac 512  Q
    |||||||| ||||||||||  ||| ||||||||||||||||||||    
T  12595629 tttactttctctctctattgttttggttttcgtgtcaatacctac 12595585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Complemental strand, 25523236 - 25523196
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  25523236 actttttgacaactttctctctcatactcacattatcctct 25523196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 424 - 507
Target Start/End: Original strand, 29175256 - 29175336
Alignment:
Q  424 acaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaata 507  Q
    |||||||||||||||||||| || ||||||  ||||||||| | |||||||  ||||||| || |||| ||||| |||||||||    
T  29175256 acaatttttgtgacaacttt-ttctctcatactcacattatctttttactt--tctctctcttgctttggtttttgtgtcaata 29175336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 533 - 581
Target Start/End: Original strand, 29891865 - 29891913
Alignment:
Q  533 tatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||  | ||| |||||||||||||||||||| |||||||||    
T  29891865 tatttgtataattattttttgacaactttctctctcatactcacattat 29891913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 582
Target Start/End: Original strand, 31275179 - 31275215
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattatt 582  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  31275179 actttttgacaactttctctctcatactcacattatt 31275215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Original strand, 31657682 - 31657714
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  31657682 tttgtgacaactttctctctcatactcacatta 31657714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 33820379 - 33820339
Alignment:
Q  541 taaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||| ||||| |||||||||||||||||||| |||||||||    
T  33820379 taacaactttttgacaactttctctctcatactcacattat 33820339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 38338957 - 38338925
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  38338957 tttgtgacaactttctctctcatactcacatta 38338925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 39881073 - 39881033
Alignment:
Q  541 taaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||| ||||| |||||||||||||||||||| |||||||||    
T  39881073 taacaactttttgacaactttctctctcatactcacattat 39881033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Complemental strand, 46794539 - 46794499
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  46794539 actttttgacaactttctctctcatactcacattatactct 46794499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Complemental strand, 51039154 - 51039114
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||| ||||||||| ||||||||||||||    
T  51039154 actttttgacaactttatctctcataatcacattattctct 51039114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 55609201 - 55609169
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  55609201 tttgtgacaactttctctctcatactcacatta 55609169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 554 - 586
Target Start/End: Original strand, 56379433 - 56379465
Alignment:
Q  554 acaactttctctctcatattcacattattctct 586  Q
    |||||||||||||||||| ||||||||||||||    
T  56379433 acaactttctctctcatactcacattattctct 56379465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 1e-18; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 429 - 525
Target Start/End: Complemental strand, 23680075 - 23679980
Alignment:
Q  429 ttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||||||||| |||| ||||   |||||||||| |||||||||||||||||||  ||||||||||||||  |||||||| ||||||||||||    
T  23680075 ttttgtgacaactttctttt-tcatacacacattatgtttttactttgtctctctattgttttagttttcgtgtttatacctactttttctttgtaa 23679980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 22330683 - 22330629
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  22330683 atatttgtacaaccactttgtgacaactttctctctcatactcacattattctct 22330629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 37352042 - 37351988
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  37352042 atatttgtacaaccactttgtgacaactttctctctcatactcacattattctct 37351988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 426 - 510
Target Start/End: Complemental strand, 41189583 - 41189500
Alignment:
Q  426 aatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacct 510  Q
    |||||||||||||||||| ||| |||||  ||||||||| | |||||||| |||||||||| |||||||||| ||||||||||||    
T  41189583 aatttttgtgacaactttcttt-ctcatactcacattatctttttactttctctctctattgctttagtttttgtgtcaatacct 41189500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 532 - 579
Target Start/End: Original strand, 2469711 - 2469758
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacatt 579  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  2469711 atatttgtacaaccactttgtgacaactttctctctcatactcacatt 2469758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 41985152 - 41985098
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| || || |||||||||||||||||||||||| ||||||||||||||    
T  41985152 atatttgtacaatcaatttgtgacaactttctctctcatactcacattattctct 41985098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 508
Target Start/End: Original strand, 27568046 - 27568130
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatac 508  Q
    ||||| |||||||||||||||| ||||||||  ||| ||||||| |||||||| ||||||||||  ||| ||||| ||||||||||    
T  27568046 gacaacttttgtgacaacttta-tttctcatactcatattatgtttttactttctctctctattgttttggtttttgtgtcaatac 27568130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 424 - 525
Target Start/End: Original strand, 46829509 - 46829608
Alignment:
Q  424 acaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgt 523  Q
    |||||||||||||||||||| | | |||||  |||||| |||| |||||||| |||||||||| ||||  |||||||| ||| |||||| ||||||||||    
T  46829509 acaatttttgtgacaactttctct-ctcatactcacat-atgtttttactttatctctctattgctttgattttcgtgccaaaacctactttttctttgt 46829606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 446 - 521
Target Start/End: Original strand, 4225803 - 4225877
Alignment:
Q  446 tttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttcttt 521  Q
    |||||||| ||||||| || | |||||||| ||||||||||  ||| |||||||||||||||||||| ||||||||    
T  4225803 tttctcatattcacatgatat-tttactttatctctctattgttttggttttcgtgtcaatacctactttttcttt 4225877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 525
Target Start/End: Original strand, 15564940 - 15565040
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||||||||||||||||||||  | |||||  ||| ||||||  |||| ||| ||||| |||  ||||| ||||||||||||||||||| |||||||||    
T  15564940 gacaatttttgtgacaactttagct-ctcatactcatattatgagttta-tttatctctttatagctttaattttcgtgtcaatacctactttttctttg 15565037  T
Q  523 taa 525  Q
    |||    
T  15565038 taa 15565040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 426 - 504
Target Start/End: Complemental strand, 24532982 - 24532905
Alignment:
Q  426 aatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtca 504  Q
    |||||||||||||| ||| || ||||||  ||||||||||| |||||||| |||||||||| |||| ||||| ||||||    
T  24532982 aatttttgtgacaatttt-ttctctcatactcacattatgtttttactttctctctctattgctttggtttttgtgtca 24532905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 30180526 - 30180580
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| ||||||||||| |||||||| |||| |||||||||||||| ||||    
T  30180526 atatttgtacaaccactttgtcacaactttatctcacatattcacattatactct 30180580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 525
Target Start/End: Original strand, 41018692 - 41018792
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||| |||||||||||||||  | ||||||  ||||||||| | |||||||| |||||||||| |||| ||||| |||| ||||||| | |||||||||    
T  41018692 gacaacttttgtgacaacttt-ctatctcatactcacattatatttttactttctctctctattactttggtttttgtgttaatacct-ctttttctttg 41018789  T
Q  523 taa 525  Q
    |||    
T  41018790 taa 41018792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 577
Target Start/End: Original strand, 25887602 - 25887647
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcaca 577  Q
    ||||||||| | |||||||||||||||||||||||||||| |||||    
T  25887602 atatttgtacatccactttgtgacaactttctctctcatactcaca 25887647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 27688656 - 27688705
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||||| ||| |||||||||||||| ||||||| |||||||||    
T  27688656 atatttgtataactactatgtgacaactttctttctcatactcacattat 27688705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 525
Target Start/End: Complemental strand, 12645950 - 12645852
Alignment:
Q  426 aatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||  |||| ||| |||| ||||||||||||||| | |||||||| |||||||||| ||||  ||||||||  |||| | || ||||||||||||    
T  12645950 aatttttgcaacaatttttttttgtcatgttcacattattt-tttactttatctctctattgctttgattttcgtgcaaatatcaactttttctttgtaa 12645852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 546 - 581
Target Start/End: Original strand, 28824536 - 28824571
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattat 581  Q
    ||||| ||||||||||||||||||||||||||||||    
T  28824536 actttttgacaactttctctctcatattcacattat 28824571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 506
Target Start/End: Original strand, 31445346 - 31445428
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaat 506  Q
    ||||| ||||||||||||||| |||| ||||  ||||||||| | |||||||| |||||||||| ||||  |||| ||||||||    
T  31445346 gacaacttttgtgacaactttctttt-tcatactcacattatatttttactttctctctctattgctttgatttttgtgtcaat 31445428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 532 - 579
Target Start/End: Complemental strand, 31785523 - 31785476
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacatt 579  Q
    ||||||||| ||||||||| ||| |||||||||||||||| |||||||    
T  31785523 atatttgtacaaccactttatgaaaactttctctctcatactcacatt 31785476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 525
Target Start/End: Original strand, 39029890 - 39029988
Alignment:
Q  424 acaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgt 523  Q
    |||||||||||||||||||| |   |||||  ||||||||||| |||| ||| |||||||||| |||| |||||| || |||||| ||  |||| |||||    
T  39029890 acaatttttgtgacaactttct---ctcatactcacattatgtttttaatttatctctctattactttggttttcatgccaatacttattttttatttgt 39029986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 507
Target Start/End: Complemental strand, 41430162 - 41430111
Alignment:
Q  456 tcacattatgtctttactttgtctctctatttctttagttttcgtgtcaata 507  Q
    ||||||||| | |||||||| |||||||||| |||| |||||||||||||||    
T  41430162 tcacattatatttttactttatctctctattgctttggttttcgtgtcaata 41430111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 532 - 571
Target Start/End: Original strand, 43444643 - 43444682
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcata 571  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  43444643 atatttgtacaaccactttatgacaactttctctctcata 43444682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 7817673 - 7817707
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  7817673 tttgtgacaactttctctctcatactcacattatt 7817707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 8459622 - 8459676
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| ||||||||| | |||||||||||||||||| ||| ||||| ||||    
T  8459622 atatttgtacaaccactttttaacaactttctctctcatactcatattatcctct 8459676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 27778087 - 27778141
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| ||| ||||||||||| |||| ||||| ||| ||||||||||||||    
T  27778087 atatttgtacaactactttgtgacagctttatctctgatactcacattattctct 27778141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 37856217 - 37856163
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| ||||| |||||||||||||| |||| |||| ||||||||| ||||    
T  37856217 atatttgtacaaccattttgtgacaactttatctcacatactcacattatactct 37856163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 486
Target Start/End: Complemental strand, 38340424 - 38340363
Alignment:
Q  424 acaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatt 486  Q
    |||| ||||||||||||||||| | |||||  ||||||||||| |||||||| ||||||||||    
T  38340424 acaacttttgtgacaactttatct-ctcatactcacattatgtttttactttttctctctatt 38340363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 39875861 - 39875807
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    |||||| || ||||||||| | |||||||||||||||||||||| ||||| ||||    
T  39875861 atatttatacaaccactttttaacaactttctctctcatattcatattatactct 39875807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 41254795 - 41254849
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    |||||||||  | |||||| |||||||||||||||||||| ||||||||| ||||    
T  41254795 atatttgtacgatcactttttgacaactttctctctcatactcacattatactct 41254849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 43213327 - 43213381
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| ||||||||| | |||| ||||||||||||| ||||||||| ||||    
T  43213327 atatttgtacaaccactttctaacaattttctctctcatactcacattatactct 43213381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 525
Target Start/End: Complemental strand, 44184601 - 44184501
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||| ||||||||||||||| | | |||||  ||||||||  | |||||||| |||||||||| |||| |||||||||  ||||||||  |||||||||    
T  44184601 gacaacttttgtgacaactttctct-ctcatactcacattactt-tttactttatctctctattgctttggttttcgtgcaaatacctattttttctttg 44184504  T
Q  523 taa 525  Q
    |||    
T  44184503 taa 44184501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 237032 - 237081
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| || || |||||||||||||| ||||||||| |||||||||    
T  237032 atatttgtacaatcaatttgtgacaactttatctctcatactcacattat 237081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 3937157 - 3937124
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  3937157 tttgtgacaactttctctctcatactcacattat 3937124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Complemental strand, 6109970 - 6109913
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||| ||||||||||  ||| |||||||||||||||| ||  ||||||||||||    
T  6109970 tttactttatctctctattgttttggttttcgtgtcaatacataatttttctttgtaa 6109913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 6269402 - 6269435
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  6269402 tttgtgacaactttctctctcatactcacattat 6269435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 517
Target Start/End: Complemental strand, 6699858 - 6699797
Alignment:
Q  456 tcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctacctttt 517  Q
    ||||||||||| |||| ||| |||| |||||  ||| |||||||||||||||||||| ||||    
T  6699858 tcacattatgtttttattttctctccctattgatttggttttcgtgtcaatacctacttttt 6699797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 13152628 - 13152661
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  13152628 tttgtgacaactttctctctcatactcacattat 13152661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 517
Target Start/End: Original strand, 20454317 - 20454366
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctacctttt 517  Q
    |||||||| |||||||| | |||||||||||||||||||| |||| ||||    
T  20454317 tttactttttctctctagtgctttagttttcgtgtcaataactacttttt 20454366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 28036816 - 28036873
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||| |||||||||| |||| |||||||||  |||||| || ||||||||||||    
T  28036816 tttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaa 28036873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 500
Target Start/End: Complemental strand, 30667797 - 30667744
Alignment:
Q  447 ttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgt 500  Q
    ||||||| |||||||||||| |||||||| | |||||||| |||| ||||||||    
T  30667797 ttctcatattcacattatgtttttactttctttctctattactttggttttcgt 30667744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 30941421 - 30941454
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  30941421 tttgtgacaactttctctctcatactcacattat 30941454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 34978332 - 34978365
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  34978332 tttgtgacaactttctctctcatactcacattat 34978365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 36019488 - 36019545
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||| ||||| |||| || | ||||  |||||||||||||||||||||||||||    
T  36019488 tttactttatctctatattgctatggtttctgtgtcaatacctaccttttctttgtaa 36019545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 42584838 - 42584871
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  42584838 tttgtgacaactttctctctcatactcacattat 42584871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 497
Target Start/End: Original strand, 43025369 - 43025441
Alignment:
Q  424 acaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagtttt 497  Q
    ||||||||||||||||||||| | ||||||  ||| ||||| | |||||||| |||||||||| |||| |||||    
T  43025369 acaatttttgtgacaacttta-tctctcatactcatattatctttttactttttctctctattgctttggtttt 43025441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 44496838 - 44496805
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  44496838 tttgtgacaactttctctctcatactcacattat 44496805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 552 - 581
Target Start/End: Complemental strand, 45420092 - 45420063
Alignment:
Q  552 tgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||||||||||    
T  45420092 tgacaactttctctctcatattcacattat 45420063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 3343365 - 3343333
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||| ||||||||||||||||||||||    
T  3343365 tttgtgacaattttctctctcatattcacatta 3343333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 533 - 581
Target Start/End: Complemental strand, 10619750 - 10619702
Alignment:
Q  533 tatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||||||| ||||  ||| |||||||||||||||||||| |||||||||    
T  10619750 tatttgtacaacctttttttgacaactttctctctcatactcacattat 10619702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 11353009 - 11352977
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  11353009 tttgtgacaactttctctctcatactcacatta 11352977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 582
Target Start/End: Complemental strand, 18067925 - 18067889
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattatt 582  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  18067925 actttttgacaactttctctctcatattcatattatt 18067889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 19426613 - 19426653
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  19426613 actttttgacaactttctctctcatactcacattatcctct 19426653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 21752691 - 21752731
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||| ||||||||| ||||||||||||||    
T  21752691 actttttgacaactttatctctcatactcacattattctct 21752731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 525
Target Start/End: Original strand, 22816973 - 22817067
Alignment:
Q  429 ttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||||||||||| |||||||   ||||||||| | |||||||| ||||||||||  ||| |||| ||||||| || ||| |||| ||||||||    
T  22816973 ttttgtgacaacttta-tttctcacactcacattatttttttactttctctctctattgttttggtttccgtgtcactatcta-ctttcctttgtaa 22817067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 553 - 581
Target Start/End: Original strand, 26123407 - 26123435
Alignment:
Q  553 gacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||||||||    
T  26123407 gacaactttctctctcatattcacattat 26123435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 553 - 581
Target Start/End: Original strand, 33056658 - 33056686
Alignment:
Q  553 gacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||||||||    
T  33056658 gacaactttctctctcatattcacattat 33056686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 456 - 508
Target Start/End: Complemental strand, 34507216 - 34507164
Alignment:
Q  456 tcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatac 508  Q
    ||||||||| | |||||||| |||||||||| ||||  |||||||||||||||    
T  34507216 tcacattatatttttactttctctctctattgctttgattttcgtgtcaatac 34507164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 446 - 510
Target Start/End: Complemental strand, 35628041 - 35627977
Alignment:
Q  446 tttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacct 510  Q
    ||||||||  ||||||||||| |||||||| ||||  |||| |||| ||||| ||||||||||||    
T  35628041 tttctcatactcacattatgtttttactttatctccttattgctttggtttttgtgtcaatacct 35627977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 424 - 507
Target Start/End: Complemental strand, 36352628 - 36352544
Alignment:
Q  424 acaatttttgtgacaactttattt-tctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaata 507  Q
    |||| ||||||||||||||| | | ||||||  | ||||||| | |||||||| |||||||||| ||||  ||||||||||||||    
T  36352628 acaacttttgtgacaactttctctctctcatacttacattatatttttactttatctctctattgctttgattttcgtgtcaata 36352544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 423 - 522
Target Start/End: Original strand, 43482553 - 43482649
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    |||||||||||||| ||||||  ||| ||||  ||||||||  | |||||||| ||||||||||  ||| |||||||||  ||||||||| |||||||||    
T  43482553 gacaatttttgtgataacttt-ctttatcatactcacatta--tttttactttatctctctattgttttggttttcgtgcaaatacctactttttctttg 43482649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 44184594 - 44184562
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  44184594 tttgtgacaactttctctctcatactcacatta 44184562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 532 - 582
Target Start/End: Original strand, 5502379 - 5502429
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattatt 582  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5502379 atatttgtacaaccactttgtgacaactttctctctcatattcacattatt 5502429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 531 - 581
Target Start/End: Complemental strand, 16011970 - 16011920
Alignment:
Q  531 aatatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  16011970 aatatttgtacaaccactttgtgacaaatttctctctcatattcacattat 16011920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 1179414 - 1179467
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||||| |||||||||||||||||||||||||||  ||||||||||||||    
T  1179414 atatttgtata-ccactttgtgacaactttctctctcattctcacattattctct 1179467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 423 - 525
Target Start/End: Complemental strand, 14707386 - 14707285
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||| |||||||| |||||| ||| ||||| || ||||||| | |||||||| |||| ||||| ||||  ||||| ||||||||||||| |||||||||    
T  14707386 gacaacttttgtgataactttcttt-ctcatatttacattatttttttactttatctccctattgctttgattttcttgtcaatacctactttttctttg 14707288  T
Q  523 taa 525  Q
    |||    
T  14707287 taa 14707285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 455 - 525
Target Start/End: Complemental strand, 18126197 - 18126127
Alignment:
Q  455 ttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||||||| |||||||| | ||| ||||  ||| | |||||||||||||||||||||||||||||||    
T  18126197 ttcacattatgtttttactttatttctgtattgattttgatttcgtgtcaatacctaccttttctttgtaa 18126127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 44103784 - 44103838
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| ||||||||| |||||||||||||||||||| ||||||||| ||||    
T  44103784 atatttgtacaaccactttatgacaactttctctctcatactcacattatcctct 44103838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 426 - 507
Target Start/End: Original strand, 45405563 - 45405643
Alignment:
Q  426 aatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaata 507  Q
    |||||||||||||||||| | || |||| |||||||||| | |||||||| |||||||||| ||||  ||||||||||||||    
T  45405563 aatttttgtgacaactttttctt-tcatattcacattatatttttactttctctctctattgctttgattttcgtgtcaata 45405643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 532 - 579
Target Start/End: Original strand, 1796504 - 1796551
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacatt 579  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||||    
T  1796504 atatttgtacaaccactttgtgacaactttctttctcatactcacatt 1796551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 525
Target Start/End: Complemental strand, 41159931 - 41159831
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||| ||||||||||||||| | | |||||  ||||||||| | |||||||| |||||||||| |||| |||||||||  ||||||||  |||||||||    
T  41159931 gacaacttttgtgacaactttctct-ctcatactcacattattt-tttactttatctctctattgctttggttttcgtgcaaatacctattttttctttg 41159834  T
Q  523 taa 525  Q
    |||    
T  41159833 taa 41159831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 1370337 - 1370288
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||||||||| ||||||||||||| |||| |||||||||    
T  1370337 atatttgtacaaccactttgtaacaactttctctcacatactcacattat 1370288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 14710945 - 14710896
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| || || |||||||||||||||||||||||| |||||||||    
T  14710945 atatttgtacaatcattttgtgacaactttctctctcatactcacattat 14710896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 525
Target Start/End: Complemental strand, 36885487 - 36885430
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||| ||||| |||| ||||  ||||||||||||||||||| ||||||||||||    
T  36885487 tttactttatctctttattgctttgattttcgtgtcaatacctactttttctttgtaa 36885430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 37392180 - 37392131
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||||||||    
T  37392180 atatttgtacaaccattttttgacaactttctctctcatactcacattat 37392131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 37524480 - 37524431
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| || |||||||||||||||||||||| |||| |||||||||    
T  37524480 atatttgtacaagcactttgtgacaactttctctcacatactcacattat 37524431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 429 - 525
Target Start/End: Original strand, 34873871 - 34873965
Alignment:
Q  429 ttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||||||||||| ||||||||  | ||||||| | |||||||| |||||||||| |||| |||| ||||||| || ||| |||| ||||||||    
T  34873871 ttttgtgacaacttta-tttctcatactaacattatttttttactttctctctctattgctttggtttccgtgtcagtatcta-ctttcctttgtaa 34873965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 507
Target Start/End: Complemental strand, 37942949 - 37942866
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaata 507  Q
    ||||||||||||||||||||| || | |||| || ||||||| | |||||||| ||||||||||  |||||||||  ||||||||    
T  37942949 gacaatttttgtgacaacttt-ttctttcatatttacattatatttttactttctctctctattgttttagtttttatgtcaata 37942866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 521
Target Start/End: Complemental strand, 888292 - 888203
Alignment:
Q  430 tttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttcttt 521  Q
    |||||||||||||| ||| ||||| ||||||| || | |||| ||| |||||||||| |||| ||||||||||||||| |||  ||||||||    
T  888292 tttgtgacaactttcttt-ctcatattcacatgatat-tttattttatctctctattactttggttttcgtgtcaatatctattttttcttt 888203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 525
Target Start/End: Complemental strand, 5740817 - 5740728
Alignment:
Q  434 tgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||||| || ||||||  ||||||||||| |||||||| ||||||||||  ||| ||||| ||||| |||||| | ||||||||||||    
T  5740817 tgacaacttt-ttctctcatactcacattatgtttttactttctctctctattgttttggtttttgtgtcgatacct-ctttttctttgtaa 5740728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 546 - 581
Target Start/End: Complemental strand, 11114707 - 11114672
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattat 581  Q
    ||||| ||||||||||||||||||||||||||||||    
T  11114707 actttttgacaactttctctctcatattcacattat 11114672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 546 - 581
Target Start/End: Complemental strand, 13884198 - 13884163
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||||| |||||||||    
T  13884198 actttgtgacaactttctctctcatactcacattat 13884163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 533 - 576
Target Start/End: Complemental strand, 36178311 - 36178268
Alignment:
Q  533 tatttgtataaccactttgtgacaactttctctctcatattcac 576  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||    
T  36178311 tatttgtacaaccaatttgtgacaactttctctctcatactcac 36178268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 525
Target Start/End: Original strand, 37597270 - 37597367
Alignment:
Q  426 aatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||| ||||||||||||| | || ||||  ||||||||| | |||||||| | |||||||| ||||  ||||||||| ||| ||||||||||||||||||    
T  37597270 aattattgtgacaactttctctt-tcatactcacattattt-tttactttatttctctattgctttgattttcgtgtaaatccctaccttttctttgtaa 37597367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 570
Target Start/End: Complemental strand, 9047122 - 9047084
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcat 570  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  9047122 atatttgtacaaccactttttgacaactttctctctcat 9047084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 30439541 - 30439507
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  30439541 tttgtgacaactttctctctcatactcacattatt 30439507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 552 - 586
Target Start/End: Complemental strand, 30925686 - 30925652
Alignment:
Q  552 tgacaactttctctctcatattcacattattctct 586  Q
    |||||||||||||||||||||||||||||| ||||    
T  30925686 tgacaactttctctctcatattcacattatcctct 30925652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 586
Target Start/End: Complemental strand, 40413385 - 40413347
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattattctct 586  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  40413385 tttgtgacaactttctctctcatactcacgttattctct 40413347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 41159924 - 41159890
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  41159924 tttgtgacaactttctctctcatactcacattatt 41159890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 42768174 - 42768120
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| ||| ||||| |||||| ||||||||||||| ||||||||| ||||    
T  42768174 atatttgtacaactactttttgacaattttctctctcatactcacattatcctct 42768120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 157075 - 157124
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||| |||| ||||||||||||||||||| | |||||||    
T  157075 atatttgtacaaccattttgcgacaactttctctctcatacttacattat 157124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 2730996 - 2730963
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    ||||| ||||||||||||||||||||||||||||    
T  2730996 tttgtaacaactttctctctcatattcacattat 2730963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 3270914 - 3270881
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||| |||||||||||||    
T  3270914 tttgtgacaactttctctctaatattcacattat 3270881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 6440117 - 6440150
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  6440117 tttgtgacaactttctctctcatactcacattat 6440150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 7325734 - 7325783
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| | ||||||| | |||||||||||||||||| |||||||||    
T  7325734 atatttgtacatccactttataacaactttctctctcatactcacattat 7325783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Complemental strand, 7473025 - 7472969
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||| |||||||||| ||||||||||||||  ||||||||  ||||||||||||    
T  7473025 tttactttatctctctattgctttagttttcgtgcaaataccta-tttttctttgtaa 7472969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 25830281 - 25830248
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  25830281 tttgtgacaactttctctctcatactcacattat 25830248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 552 - 581
Target Start/End: Complemental strand, 34996392 - 34996363
Alignment:
Q  552 tgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||||||||||    
T  34996392 tgacaactttctctctcatattcacattat 34996363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 35067196 - 35067229
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  35067196 tttgtgacaactttctctctcatactcacattat 35067229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 43285998 - 43285965
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  43285998 tttgtgacaactttctctctcatactcacattat 43285965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 43715910 - 43715943
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  43715910 tttgtgacaactttctctctcatactcacattat 43715943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 44061753 - 44061786
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  44061753 tttgtgacaactttctctctcatactcacattat 44061786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 9550450 - 9550410
Alignment:
Q  541 taaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||| ||||| |||||||||||||||||||| |||||||||    
T  9550450 taacaactttttgacaactttctctctcatactcacattat 9550410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 426 - 486
Target Start/End: Original strand, 10692470 - 10692529
Alignment:
Q  426 aatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatt 486  Q
    ||||||||||||||||||| | ||||||  ||||||||| | |||||||| ||||||||||    
T  10692470 aatttttgtgacaacttta-tctctcatactcacattatctttttactttctctctctatt 10692529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Complemental strand, 11879528 - 11879488
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  11879528 actttttgacaactttctctctcatactcacattatcctct 11879488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Complemental strand, 11896944 - 11896904
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  11896944 actttttgacaactttctctctcatactcacattatcctct 11896904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 12659080 - 12659120
Alignment:
Q  541 taaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||| ||||| |||||||||||||||||||| |||||||||    
T  12659080 taacaactttttgacaactttctctctcatactcacattat 12659120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 33100504 - 33100472
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  33100504 tttgtgacaactttctctctcatactcacatta 33100472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 582
Target Start/End: Complemental strand, 37210087 - 37210051
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattatt 582  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  37210087 actttttgacaactttctctctcatactcacattatt 37210051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 457 - 521
Target Start/End: Original strand, 38675665 - 38675728
Alignment:
Q  457 cacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttcttt 521  Q
    |||||||| | |||||||| ||||||||||||||| ||||| ||| |||||| || |||||||||    
T  38675665 cacattatatttttactttctctctctatttctttggtttttgtgccaatacata-cttttcttt 38675728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 40102056 - 40102096
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| | ||||||||||||    
T  40102056 actttttgacaactttctctctcatacttacattattctct 40102096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 552 - 580
Target Start/End: Complemental strand, 42569760 - 42569732
Alignment:
Q  552 tgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||||||||    
T  42569760 tgacaactttctctctcatattcacatta 42569732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 582
Target Start/End: Original strand, 42768239 - 42768275
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  42768239 actttgtgacaactttttctctcatactcacattatt 42768275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 45101429 - 45101469
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  45101429 actttttgacaactttctctctcatactcacattatcctct 45101469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 33567275 - 33567221
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  33567275 atatttgtacaaccactttgtgacaactttctctctcatactcacattattctct 33567221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 423 - 525
Target Start/End: Original strand, 21012597 - 21012695
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||||||||||||||||||| |   ||||| || ||||||| | |||||||| | ||||||||| ||| |||||||||||||||||||| |||||||||    
T  21012597 gacaatttttgtgacaactttct---ctcatatttacattatatttttactttctttctctattttttt-gttttcgtgtcaatacctactttttctttg 21012692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 423 - 525
Target Start/End: Original strand, 20770160 - 20770260
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||| ||||||||||||||| | | |||||  ||||||||| | |||||||| |||||||||| ||||  ||||||||||||||||||| |||||||||    
T  20770160 gacaacttttgtgacaactttctct-ctcatactcacattattt-tttactttatctctctattgctttgattttcgtgtcaatacctactttttctttg 20770257  T
Q  523 taa 525  Q
    |||    
T  20770258 taa 20770260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 532 - 578
Target Start/End: Complemental strand, 6865839 - 6865793
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacat 578  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||    
T  6865839 atatttgtacaaccactttgtgacaactttctctctcatactcacat 6865793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 423 - 525
Target Start/End: Original strand, 13309911 - 13310011
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    |||||||||||||| |||||| | | ||||| |||||||||||| |||||||| |||||||| | |||| ||||| |||| ||||||| | |||||||||    
T  13309911 gacaatttttgtgataactttctct-ctcatattcacattatgtttttactttctctctctactactttggtttttgtgttaatacct-cattttctttg 13310008  T
Q  523 taa 525  Q
    |||    
T  13310009 taa 13310011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 29227725 - 29227779
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||||||||| ||||    
T  29227725 atatttgtacaactactttgtgacaactttctctctcatactcacattatcctct 29227779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 424 - 510
Target Start/End: Original strand, 41321284 - 41321369
Alignment:
Q  424 acaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacct 510  Q
    |||||||||||||||||||| ||| |||||  ||||||||| | | |||||| |||||||||| |||| ||||| ||||||||||||    
T  41321284 acaatttttgtgacaactttcttt-ctcatactcacattatctttgtactttctctctctattactttggtttttgtgtcaatacct 41321369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 13734412 - 13734363
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  13734412 atatttgtacaaccactttatgacaactttctctctcatactcacattat 13734363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 533 - 581
Target Start/End: Complemental strand, 2117675 - 2117627
Alignment:
Q  533 tatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  2117675 tatttgtacaacaactttgtgacaactttctctctcatactcacattat 2117627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 426 - 525
Target Start/End: Original strand, 33598994 - 33599090
Alignment:
Q  426 aatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||||| |||||| ||| |||||  ||||||||||| |||||||| |||||||||| ||||| |||| ||||||||| || | ||||||||||||    
T  33598994 aatttttgtgataactttcttt-ctcatactcacattatgtttttactttttctctctattgctttaatttt-gtgtcaatatct-ctttttctttgtaa 33599090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 14206408 - 14206462
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| ||||| ||| |||||||||||||||||||| ||||||||| ||||    
T  14206408 atatttgtacaaccattttttgacaactttctctctcatactcacattatcctct 14206462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 39628825 - 39628859
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||||||||||||||    
T  39628825 tttgtgacaactttctctctcatattcacattatt 39628859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 1079988 - 1079955
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||||||||||||||    
T  1079988 tttgtgacaactttctctctcatattcacattat 1079955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 8725474 - 8725425
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||||||| | |||||||||||||||||| |||||||||    
T  8725474 atatttgtacaaccactttattacaactttctctctcatactcacattat 8725425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 26686917 - 26686950
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||||||||||||||    
T  26686917 tttgtgacaactttctctctcatattcacattat 26686950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 26956648 - 26956681
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||||||||||||||    
T  26956648 tttgtgacaactttctctctcatattcacattat 26956681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 534 - 586
Target Start/End: Complemental strand, 4835079 - 4835027
Alignment:
Q  534 atttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||| ||||||||| ||||||| |||||||||||||||| ||||| ||||    
T  4835079 atttgtacaaccactttatgacaaccttctctctcatattcatattatactct 4835027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 508
Target Start/End: Complemental strand, 6758832 - 6758749
Alignment:
Q  424 acaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatac 508  Q
    |||||||||||||||||||| | | || ||  ||||||||| | |||| ||| |||||||||| |||| ||||||||||||||||    
T  6758832 acaatttttgtgacaactttctct-cttatactcacattatatttttattttatctctctattgctttggttttcgtgtcaatac 6758749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 429 - 525
Target Start/End: Original strand, 10865352 - 10865447
Alignment:
Q  429 ttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||||| ||| || ||||||  | ||||||||| || | ||| |||||||||| ||||  ||||||||||||||| ||| ||||||||||||    
T  10865352 ttttgtgacaatttt-ttatctcatacttacattatgttttcattttatctctctattactttgattttcgtgtcaatacttactttttctttgtaa 10865447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 532 - 584
Target Start/End: Original strand, 21210838 - 21210890
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattct 584  Q
    ||||||| | ||||||||| ||||||||||||||||||||  |||||||||||    
T  21210838 atatttgaacaaccactttttgacaactttctctctcatacacacattattct 21210890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 34381045 - 34381085
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||||||||    
T  34381045 actttttgacaactttctctctcatactcacattattctct 34381085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 510
Target Start/End: Complemental strand, 36563091 - 36563009
Alignment:
Q  426 aatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacct 510  Q
    ||||||||||||||||| || || |||| |||||||| ||| |||||||| |||||||||| |||  ||||| ||||||||||||    
T  36563091 aatttttgtgacaacttaatctt-tcatattcacatt-tgtttttactttctctctctattgcttaggtttttgtgtcaatacct 36563009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 535 - 578
Target Start/End: Complemental strand, 372769 - 372726
Alignment:
Q  535 tttgtataaccactttgtgacaactttctctctcatattcacat 578  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||    
T  372769 tttgtacaaccattttgtgacaactttctctctcatactcacat 372726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 525
Target Start/End: Complemental strand, 6940189 - 6940092
Alignment:
Q  426 aatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||||||||||||  | ||||||  ||||| ||||| |||||||| |||||||||| ||||  |||||||| ||| |||||| ||| ||||||||    
T  6940189 aatttttgtgacaacttt-ctctctcatactcaca-tatgtttttactttatctctctattgctttgattttcgtgccaaaacctacttttcctttgtaa 6940092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 1839380 - 1839346
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  1839380 tttgtgacaactttctctctcatactcacattatt 1839346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 586
Target Start/End: Original strand, 16202755 - 16202793
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattattctct 586  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  16202755 tttgtgacaactttctctctcatactcacattatcctct 16202793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 19840021 - 19839987
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  19840021 tttgtgacaactttctctctcatactcacattatt 19839987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 20770167 - 20770201
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  20770167 tttgtgacaactttctctctcatactcacattatt 20770201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 535 - 581
Target Start/End: Complemental strand, 32682178 - 32682132
Alignment:
Q  535 tttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||||| ||||||||| | |||| |||||||||||||||||||||||    
T  32682178 tttgtacaaccactttattacaattttctctctcatattcacattat 32682132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 39458676 - 39458730
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    |||| |||| ||||| ||| |||||||||||||||||||| ||||||||| ||||    
T  39458676 atatctgtacaaccagtttttgacaactttctctctcatactcacattatcctct 39458730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 41175741 - 41175707
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  41175741 tttgtgacaactttctctctcatactcacattatt 41175707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 611900 - 611933
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  611900 tttgtgacaactttctctctcatactcacattat 611933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 525
Target Start/End: Complemental strand, 1079994 - 1079895
Alignment:
Q  424 acaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgt 523  Q
    ||||||||||||||||||||  | |||||| |||||||||| | |||||||| | ||| |||| |||| | ||| ||| |||||||| | ||||||||||    
T  1079994 acaatttttgtgacaacttt-ctctctcatattcacattatctttttactttctttctatattgctttggattttgtgccaatacct-cattttctttgt 1079897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 510
Target Start/End: Original strand, 2972354 - 2972438
Alignment:
Q  426 aatttttgtgacaactttattttctcatgttcacattat-gtctttactttgtctctctatttctttagttttcgtgtcaatacct 510  Q
    ||||||||| |||||||| ||| |||||  ||||||||| || |||||||| |||||||||| ||||  |||| ||||||||||||    
T  2972354 aatttttgttacaactttcttt-ctcatactcacattatcgtttttactttctctctctattgctttgatttttgtgtcaatacct 2972438  T

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Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 508
Target Start/End: Original strand, 4719679 - 4719763
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatac 508  Q
    ||||| |||||||||||| || || ||||||  ||||||||||| |||||||| |||||||||| ||||  |||| ||| ||||||    
T  4719679 gacaacttttgtgacaacctt-ttctctcatactcacattatgtttttactttttctctctattgctttgatttttgtgccaatac 4719763  T

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Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 552 - 581
Target Start/End: Original strand, 10232538 - 10232567
Alignment:
Q  552 tgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||||||||||    
T  10232538 tgacaactttctctctcatattcacattat 10232567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 13309918 - 13309951
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    ||||||| ||||||||||||||||||||||||||    
T  13309918 tttgtgataactttctctctcatattcacattat 13309951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 22098291 - 22098324
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  22098291 tttgtgacaactttctctctcatactcacattat 22098324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 31284446 - 31284397
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| | ||| |||||||||||||||||||||||| ||| |||||    
T  31284446 atatttgtacatccattttgtgacaactttctctctcatactcatattat 31284397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 33910140 - 33910091
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||  ||||| ||| |||||||||||||||||||| |||||||||    
T  33910140 atatttgttcaaccattttttgacaactttctctctcatactcacattat 33910091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 34124693 - 34124750
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||| | |||||||| |||| |||||||||| |||||| || ||||||||||||    
T  34124693 tttactttatttctctattgctttggttttcgtgtaaataccaactttttctttgtaa 34124750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 189738 - 189706
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  189738 tttgtgacaactttctctctcatactcacatta 189706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 423 - 507
Target Start/End: Original strand, 1274386 - 1274469
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaata 507  Q
    ||||| ||||||||||||||||| || ||||  ||||||||  | |||||||  |||||||||| |||| ||||| |||||||||    
T  1274386 gacaacttttgtgacaactttatctt-tcatactcacattacctttttacttcctctctctattgctttggtttttgtgtcaata 1274469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 532 - 576
Target Start/End: Original strand, 4098631 - 4098675
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcac 576  Q
    ||||||||| ||| | |||||||||||||| ||||||||||||||    
T  4098631 atatttgtacaactattttgtgacaactttatctctcatattcac 4098675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 6046341 - 6046381
Alignment:
Q  541 taaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||| ||||| |||||||||||||||||||| |||||||||    
T  6046341 taacaactttttgacaactttctctctcatactcacattat 6046381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 6446553 - 6446521
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  6446553 tttgtgacaactttctctctcatactcacatta 6446521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Original strand, 6517748 - 6517780
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  6517748 tttgtgacaactttctctctcatactcacatta 6517780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 525
Target Start/End: Original strand, 9581614 - 9581708
Alignment:
Q  429 ttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||||||||| | || ||||  ||||||||| | |||||||| ||||||||||  ||| |||| ||||  ||||||||| ||||||||||||    
T  9581614 ttttgtgacaactttctctt-tcatactcacattattt-tttactttatctctctattgttttggtttccgtgcaaatacctactttttctttgtaa 9581708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 525
Target Start/End: Complemental strand, 15953081 - 15952987
Alignment:
Q  429 ttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||||||||| || ||||||  ||| ||||| | |||||||| |||||||||| ||||  ||||||||  |||||| || ||||||||||||    
T  15953081 ttttgtgacaacttt-ttctctcatactcatattattt-tttactttatctctctattgctttgattttcgtgcaaatacccactttttctttgtaa 15952987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 19481217 - 19481185
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  19481217 tttgtgacaactttctctctcatactcacatta 19481185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 582
Target Start/End: Original strand, 21023331 - 21023367
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattatt 582  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  21023331 actttttgacaactttctctctcatactcacattatt 21023367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 423 - 487
Target Start/End: Original strand, 27546092 - 27546155
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctattt 487  Q
    ||||| |||||||||||||||| ||||||||  ||||||||| | |||||||| | |||||||||    
T  27546092 gacaaattttgtgacaacttta-tttctcatactcacattatatttttactttatatctctattt 27546155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 549 - 581
Target Start/End: Original strand, 36738984 - 36739016
Alignment:
Q  549 ttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||| |||||||||    
T  36738984 ttgtgacaactttctctctcatactcacattat 36739016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 39595305 - 39595345
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| |||| |||||||||    
T  39595305 actttttgacaactttctctctcatactcacgttattctct 39595345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Complemental strand, 40223823 - 40223783
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  40223823 actttttgacaactttctctctcatactcacattatcctct 40223783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 8482284 - 8482235
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  8482284 atatttgtacaaccactttatgacaactttctctctcatattcacattat 8482235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 423 - 525
Target Start/End: Original strand, 15269890 - 15269990
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||||||||||||||||||| | || |||| |||||||||  | |||||||| |||||||||| ||||  ||||||||  ||||||||| |||||||||    
T  15269890 gacaatttttgtgacaactttctctt-tcatattcacattactt-tttactttatctctctattgctttgattttcgtgcaaatacctactttttctttg 15269987  T
Q  523 taa 525  Q
    |||    
T  15269988 taa 15269990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 7121398 - 7121447
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  7121398 atatttgtataaccattttgtaacaactttctctctcatactcacattat 7121447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 429 - 525
Target Start/End: Original strand, 5054643 - 5054737
Alignment:
Q  429 ttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||||||||| || ||||||  ||||||||||| || ||||| |||||||||| ||||  ||||||||  ||||||||| ||||||||||||    
T  5054643 ttttgtgacaacttt-ttctctcatactcacattatgtgtt-actttatctctctattgctttgattttcgtgcaaatacctactttttctttgtaa 5054737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 426 - 521
Target Start/End: Complemental strand, 18876961 - 18876867
Alignment:
Q  426 aatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttcttt 521  Q
    ||||||||||||||||||  | |||||| ||||||| || | |||||||| |||||||||| |||| |||| ||||  ||||||||| ||||||||    
T  18876961 aatttttgtgacaacttt-ctctctcatattcacataatttttttactttatctctctattgctttggtttccgtgcaaatacctactttttcttt 18876867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 25801865 - 25801811
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| ||||| |||||||||||||| ||||||||| ||||||||| ||||    
T  25801865 atatttgtacaaccaatttgtgacaactttatctctcatactcacattatactct 25801811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 525
Target Start/End: Original strand, 25881573 - 25881673
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||||||||||||||||||| | | |||||  ||||||||| | |||||||| ||||||| || |||| |||||||| | ||||||||  |||||||||    
T  25881573 gacaatttttgtgacaactttctct-ctcatactcacattattt-tttactttatctctctgttgctttggttttcgtataaatacctattttttctttg 25881670  T
Q  523 taa 525  Q
    |||    
T  25881671 taa 25881673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 29795455 - 29795509
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| ||||| ||||||||||||||||||| |||| ||||||||| ||||    
T  29795455 atatttgtacaaccattttgtgacaactttctctcacatactcacattatactct 29795509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 525
Target Start/End: Complemental strand, 39213812 - 39213712
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||| |||||  |||||||||| | |||||  ||||||||| | |||||||| |||||||||| ||||||||||||||  |||||| || |||||||||    
T  39213812 gacaacttttgcaacaactttatct-ctcatactcacattattt-tttactttatctctctattcctttagttttcgtgcaaataccaactttttctttg 39213715  T
Q  523 taa 525  Q
    |||    
T  39213714 taa 39213712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 10472199 - 10472150
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||| ||| | |||||||||||||||||| |||||||||    
T  10472199 atatttgtataaccattttctaacaactttctctctcatactcacattat 10472150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 10711796 - 10711853
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||| |||||||||| |||| |||||||||| ||||||||  ||||||||||||    
T  10711796 tttactttatctctctattgctttggttttcgtgtaaatacctattttttctttgtaa 10711853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 18737909 - 18737876
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||||||||||||||    
T  18737909 tttgtgacaactttctctctcatattcacattat 18737876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 19695743 - 19695694
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| || |||||| |||||||||||||||| |||||||||||||    
T  19695743 atatttgtacaatcactttttgacaactttctctcttatattcacattat 19695694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 525
Target Start/End: Original strand, 42430710 - 42430778
Alignment:
Q  456 tcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||||| |||||||  ||||||||||  ||| |||| |||||||||||||| |||||||||||||    
T  42430710 tcacattatgtttttacttcctctctctattgttttggtttccgtgtcaataccta-cttttctttgtaa 42430778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 448 - 509
Target Start/End: Complemental strand, 44977518 - 44977457
Alignment:
Q  448 tctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacc 509  Q
    |||||| || ||||||||| |||||||| |||||||||| |||| ||||| |||||||||||    
T  44977518 tctcatatttacattatgtttttactttctctctctattgctttggtttttgtgtcaatacc 44977457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 45202184 - 45202135
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||| ||| | ||||||||||||||||||||||||||||    
T  45202184 atatttgtacaaccatttttttacaactttctctctcatattcacattat 45202135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 13711094 - 13711134
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    |||||||||||||||||||||||||| ||||||||| ||||    
T  13711094 actttgtgacaactttctctctcatactcacattatactct 13711134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 508
Target Start/End: Original strand, 14328411 - 14328494
Alignment:
Q  424 acaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatac 508  Q
    |||| ||||||||||||||| || ||||||  ||||||||| | |||||||| ||||||| || ||||  |||||||||||||||    
T  14328411 acaacttttgtgacaacttt-ttctctcatactcacattatatttttactttctctctctgttgctttgattttcgtgtcaatac 14328494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 429 - 525
Target Start/End: Complemental strand, 14891126 - 14891031
Alignment:
Q  429 ttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||| |||||| ||| ||||| |||||||||||  |||||||| ||| |||||| | || |||||  | |||||||| |||||||||||||||    
T  14891126 ttttgtgataactttcttt-ctcatattcacattatgattttactttatctttctattgcattggtttttatttcaataccaaccttttctttgtaa 14891031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 508
Target Start/End: Original strand, 34215317 - 34215377
Alignment:
Q  448 tctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatac 508  Q
    |||||| |||||||||||| |||||||| ||| |||||| || ||||||| ||||||||||    
T  34215317 tctcatattcacattatgtttttactttttctttctattgctatagtttttgtgtcaatac 34215377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 532 - 580
Target Start/End: Original strand, 42081056 - 42081104
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacatta 580  Q
    ||||||||| | ||||||| |||||||||||||||||||| ||||||||    
T  42081056 atatttgtacagccactttttgacaactttctctctcatactcacatta 42081104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 510
Target Start/End: Original strand, 43487410 - 43487493
Alignment:
Q  426 aatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacct 510  Q
    ||||||||||||||||||  | ||||||| ||||||||| | |||||||| | |||||||| |||| ||||| |||||| |||||    
T  43487410 aatttttgtgacaacttt-ctctctcatgctcacattatttttttactttctttctctattgctttggtttttgtgtcactacct 43487493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 511
Target Start/End: Original strand, 2131479 - 2131542
Alignment:
Q  448 tctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaataccta 511  Q
    |||||| |||||||||||| |||||||| ||||||||||  ||| |||| | ||||||||||||    
T  2131479 tctcatattcacattatgtttttactttatctctctattattttggtttccatgtcaataccta 2131542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 521
Target Start/End: Complemental strand, 17395111 - 17395022
Alignment:
Q  430 tttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttcttt 521  Q
    |||||||||||||||||| |||||  |||||| || | |||||||| ||| ||||||  |||  ||||||||||||||||||| ||||||||    
T  17395111 tttgtgacaactttattt-ctcatactcacatgatat-tttactttatctttctattgttttgattttcgtgtcaatacctacgttttcttt 17395022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 521
Target Start/End: Complemental strand, 24563018 - 24562963
Alignment:
Q  466 tctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttcttt 521  Q
    |||||| ||| |||||||||| |||| |||||||||| |||||| |||||||||||    
T  24563018 tctttattttatctctctattgctttggttttcgtgtaaataccaaccttttcttt 24562963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 525
Target Start/End: Original strand, 36517228 - 36517325
Alignment:
Q  426 aatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||||||||||||| | || | || |||| ||||| | |||||||| |||||| ||| |||||||||| |||||||||  ||| ||||||||||||    
T  36517228 aatttttgtgacaactttctctttt-atattcatattattt-tttactttatctctcaattgctttagtttttgtgtcaataattactttttctttgtaa 36517325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 9207625 - 9207659
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  9207625 tttgtgacaactttctctctcatactcacattatt 9207659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 508
Target Start/End: Original strand, 12070879 - 12070960
Alignment:
Q  424 acaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatac 508  Q
    |||||||||||||||||||| |   ||||| | |||||||| | |||||||| ||| |||||| ||||  |||||||||||||||    
T  12070879 acaatttttgtgacaactttct---ctcatatccacattatatttttactttctctttctattgctttgattttcgtgtcaatac 12070960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 578
Target Start/End: Original strand, 12191966 - 12192012
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacat 578  Q
    ||||||||||||||| | | ||| |||||||||||||||||||||||    
T  12191966 atatttgtataaccattatatgataactttctctctcatattcacat 12192012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 578
Target Start/End: Complemental strand, 18876957 - 18876927
Alignment:
Q  548 tttgtgacaactttctctctcatattcacat 578  Q
    |||||||||||||||||||||||||||||||    
T  18876957 tttgtgacaactttctctctcatattcacat 18876927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 539 - 581
Target Start/End: Complemental strand, 23345034 - 23344992
Alignment:
Q  539 tataaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||    
T  23345034 tataacaactttttgacaaccttctctctcatattcacattat 23344992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 23352940 - 23352906
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  23352940 tttgtgacaactttctctctcatactcacattatt 23352906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 25881580 - 25881614
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  25881580 tttgtgacaactttctctctcatactcacattatt 25881614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 28013975 - 28014029
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| |||| ||||    
T  28013975 atatttgtacaaccaatttttgacaactttctctctcatactcacgttatcctct 28014029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 525
Target Start/End: Original strand, 28245757 - 28245856
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||| |||||||||||||||  | ||||||  ||||||||| | |||||||| |||||||||| |||| |||||||||  ||||||||  |||||||||    
T  28245757 gacaacttttgtgacaacttt-ctctctcatactcacattat-tttttactttatctctctattgctttggttttcgtgcaaataccta-tttttctttg 28245853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 28245764 - 28245798
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  28245764 tttgtgacaactttctctctcatactcacattatt 28245798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 578
Target Start/End: Original strand, 37966375 - 37966421
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacat 578  Q
    ||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  37966375 atatttgtacaaccaatttgtgacaactttttctctcatactcacat 37966421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 486
Target Start/End: Complemental strand, 38911967 - 38911910
Alignment:
Q  428 tttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatt 486  Q
    |||||||||||||||||| || |||| |||| ||||||| |||||||| ||||||||||    
T  38911967 tttttgtgacaactttatctt-tcatattcatattatgtttttactttttctctctatt 38911910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 4138237 - 4138188
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||||| | ||| | |||||||||||||||||| |||||||||    
T  4138237 atatttgtataactattttctaacaactttctctctcatactcacattat 4138188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Complemental strand, 7664065 - 7664009
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||| |||||||||| |||| ||||| |||||||||||| | ||||||||||||    
T  7664065 tttactttctctctctattgctttggtttttgtgtcaatacct-ctttttctttgtaa 7664009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 9377528 - 9377585
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||| |||||||||| |||| |||||||||  |||| |||| ||||||||||||    
T  9377528 tttactttatctctctattgctttggttttcgtgcaaatatctactttttctttgtaa 9377585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 9760053 - 9760086
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  9760053 tttgtgacaactttctctctcatactcacattat 9760086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 12600083 - 12600116
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  12600083 tttgtgacaactttctctctcatactcacattat 12600116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 14891141 - 14891092
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||| | ||||||| |||||||| |||||||||||||||||    
T  14891141 atatttgtacaactattttgtgataactttctttctcatattcacattat 14891092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 18254245 - 18254212
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  18254245 tttgtgacaactttctctctcatactcacattat 18254212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 22353227 - 22353178
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| || || |||||||||||||||| ||||||| |||||||||    
T  22353227 atatttgtacaatcattttgtgacaactttctttctcatactcacattat 22353178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 24727434 - 24727483
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||| ||||  |||||||||||||||||| |||||||||    
T  24727434 atatttgtacaaccattttggtacaactttctctctcatactcacattat 24727483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 29349541 - 29349574
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||| |||||||||||    
T  29349541 tttgtgacaactttctctctcacattcacattat 29349574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 511
Target Start/End: Original strand, 31578462 - 31578550
Alignment:
Q  422 agacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaataccta 511  Q
    ||||| |||||||||||||||| || ||||||  |||||||||   |||||||| |||||||||| ||||  |||| |||||| ||||||    
T  31578462 agacagtttttgtgacaacttt-ttctctcatactcacattattcttttactttatctctctattgctttgatttttgtgtcactaccta 31578550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 552 - 581
Target Start/End: Complemental strand, 36376881 - 36376852
Alignment:
Q  552 tgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||||||||||    
T  36376881 tgacaactttctctctcatattcacattat 36376852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 36774574 - 36774607
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||| |||||||||||||||||||||||||||||    
T  36774574 tttgagacaactttctctctcatattcacattat 36774607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 40210103 - 40210070
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  40210103 tttgtgacaactttctctctcatactcacattat 40210070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 40496381 - 40496418
Alignment:
Q  544 ccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  40496381 ccactttttgacaactttctctctcatactcacattat 40496418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 42283302 - 42283253
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| |||||||||||||||||| ||||| | |||||||| ||||    
T  42283302 atatttgtacaaccactttgtgacaactctctcttttatattcacgttat 42283253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 525
Target Start/End: Original strand, 42372540 - 42372609
Alignment:
Q  456 tcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||| | |||||||| |||||||||| ||||  ||| ||||  |||||||||||||||| |||||    
T  42372540 tcacattatttttttactttatctctctattcctttgatttccgtgcaaatacctaccttttctctgtaa 42372609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 43725224 - 43725273
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| | | ||||| |||||||||||||||||||| |||||||||    
T  43725224 atatttgtacatctactttatgacaactttctctctcatactcacattat 43725273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 426 - 486
Target Start/End: Complemental strand, 1907803 - 1907744
Alignment:
Q  426 aatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatt 486  Q
    ||||||||||||||||||| | |||||| || | ||||||| |||||||| ||||||||||    
T  1907803 aatttttgtgacaacttta-tctctcatatttatattatgtttttactttctctctctatt 1907744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 6999103 - 6999071
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  6999103 tttgtgacaactttctctctcatactcacatta 6999071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Complemental strand, 7086162 - 7086122
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  7086162 actttttgacaactttctctctcatactcacattatcctct 7086122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Original strand, 9377492 - 9377524
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    ||||||| |||||||||||||||||||||||||    
T  9377492 tttgtgataactttctctctcatattcacatta 9377524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 511
Target Start/End: Original strand, 14794959 - 14794991
Alignment:
Q  479 tctctatttctttagttttcgtgtcaataccta 511  Q
    |||||||| ||||||||||||||||||||||||    
T  14794959 tctctattgctttagttttcgtgtcaataccta 14794991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Original strand, 15269897 - 15269929
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||| ||||||||||||||    
T  15269897 tttgtgacaactttctctttcatattcacatta 15269929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 19913825 - 19913865
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| ||||| |||| ||||||||||||||||||||||||    
T  19913825 actttttgacatctttatctctcatattcacattattctct 19913865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 22888857 - 22888825
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  22888857 tttgtgacaactttctctctcatactcacatta 22888825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 23045123 - 23045163
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  23045123 actttttgacaactttctctctcatactcacattatactct 23045163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 23880128 - 23880168
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| ||| |||||||||||||||| ||||||||||||||    
T  23880128 actttttgataactttctctctcatactcacattattctct 23880168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 582
Target Start/End: Original strand, 30996761 - 30996797
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattatt 582  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  30996761 actttttgacaactttctctctcatactcacattatt 30996797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 584
Target Start/End: Original strand, 31578470 - 31578506
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattattct 584  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  31578470 tttgtgacaactttttctctcatactcacattattct 31578506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 31635853 - 31635813
Alignment:
Q  541 taaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||| ||||| |||||||||||||||||||| |||||||||    
T  31635853 taacaactttttgacaactttctctctcatactcacattat 31635813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 584
Target Start/End: Original strand, 37003646 - 37003682
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattattct 584  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  37003646 tttgtgacaactttctctctcatactcacattgttct 37003682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 41868412 - 41868372
Alignment:
Q  541 taaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||| ||||| |||||||||||||||||||| |||||||||    
T  41868412 taacaactttttgacaactttctctctcatactcacattat 41868372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 424 - 510
Target Start/End: Complemental strand, 5694193 - 5694108
Alignment:
Q  424 acaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacct 510  Q
    ||||||||||||| || ||||||| ||||| |||||||||||| |||||||| ||||||||||  |||  |||| ||||||||||||    
T  5694193 acaatttttgtgataattttattt-ctcatattcacattatgtttttactttttctctctattgttttgatttttgtgtcaatacct 5694108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 423 - 525
Target Start/End: Complemental strand, 32459559 - 32459458
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||| ||||||||||||||| | | ||||| |||||||||  | |||||||| |||||||||| |||| |||||||||  |||||| || |||||||||    
T  32459559 gacaacttttgtgacaactttctct-ctcatattcacattacttttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttg 32459461  T
Q  523 taa 525  Q
    |||    
T  32459460 taa 32459458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 456 - 525
Target Start/End: Original strand, 26595409 - 26595477
Alignment:
Q  456 tcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||||| |||||||| |||||||||| |||| ||||| |||||||||||| | ||||||||||||    
T  26595409 tcacattatgtttttactttctctctctattgctttggtttttgtgtcaatacct-cattttctttgtaa 26595477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 460 - 525
Target Start/End: Complemental strand, 29180639 - 29180574
Alignment:
Q  460 attatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||| |||||||| ||||||||||  |||||||||| |||||||||||||  |||||||||||    
T  29180639 attatgtttttactttatctctctattattttagttttcatgtcaatacctacaatttctttgtaa 29180574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 531 - 571
Target Start/End: Original strand, 32149507 - 32149547
Alignment:
Q  531 aatatttgtataaccactttgtgacaactttctctctcata 571  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  32149507 aatatttgtacaaccactttgtgacaactttctctctcata 32149547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 578
Target Start/End: Original strand, 12441546 - 12441592
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacat 578  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||||||    
T  12441546 atatttgtacaactactttgtgacaactttctctctcatactcacat 12441592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 8505809 - 8505776
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||||||||||||||    
T  8505809 tttgtgacaactttctctctcatattcacattat 8505776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 424 - 525
Target Start/End: Original strand, 13422998 - 13423097
Alignment:
Q  424 acaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgt 523  Q
    ||||||||||||||||||||  | ||||||  ||||||||| | |||||||| ||||||||||  ||||||||| ||| |||||| ||  ||||||||||    
T  13422998 acaatttttgtgacaacttt-ctctctcatactcacattatatttttactttctctctctattattttagtttttgtgccaatacata-tttttctttgt 13423095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 30621811 - 30621868
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||| || || |||| |||||||||||||||||||| |||| ||||||||||||    
T  30621811 tttactttatccctttattgctttagttttcgtgtcaatatctactttttctttgtaa 30621868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 8395375 - 8395415
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||||||||    
T  8395375 actttttgacaactttctctctcatactcacattattctct 8395415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 429 - 525
Target Start/End: Complemental strand, 14699700 - 14699606
Alignment:
Q  429 ttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||| |||||| ||| |||||  ||||||||| | |||||||| ||||||| || |||| |||||||||  ||||||||| ||||||||||||    
T  14699700 ttttgtgataactttcttt-ctcatactcacattattt-tttactttatctctctgttgctttggttttcgtgcaaatacctactttttctttgtaa 14699606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 456 - 525
Target Start/End: Complemental strand, 25127843 - 25127773
Alignment:
Q  456 tcacattatgtctttactttgtctctct--atttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||||| |||||||| |||||||  ||| |||| |||| |||||||||||||| |||||||||||||    
T  25127843 tcacattatgtttttactttctctctctctattgctttggtttccgtgtcaataccta-cttttctttgtaa 25127773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 32459552 - 32459520
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||||||||||||    
T  32459552 tttgtgacaactttctctctcatattcacatta 32459520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 546 - 586
Target Start/End: Complemental strand, 32853182 - 32853142
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    |||||||||||||||||||||||||| ||||||||| ||||    
T  32853182 actttgtgacaactttctctctcatactcacattatactct 32853142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 548 - 579
Target Start/End: Complemental strand, 11635570 - 11635539
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatt 579  Q
    ||||||||||||||||||||||||||||||||    
T  11635570 tttgtgacaactttctctctcatattcacatt 11635539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 1196066 - 1196120
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| || |||||| |||||||||||||||| ||| ||||||||| ||||    
T  1196066 atatttgtacaatcactttttgacaactttctctctaatactcacattatactct 1196120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 2689099 - 2689065
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  2689099 tttgtgacaactttctctctcatactcacattatt 2689065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 531 - 581
Target Start/End: Complemental strand, 2718042 - 2717992
Alignment:
Q  531 aatatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||| ||||| || ||||| |||||||||||||||||| |||||||||    
T  2718042 aatatttatataatcaatttgtaacaactttctctctcataatcacattat 2717992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 15318223 - 15318189
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    ||||| |||||||||||||||||||||||||||||    
T  15318223 tttgttacaactttctctctcatattcacattatt 15318189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 525
Target Start/End: Original strand, 24979961 - 24980063
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||| |||||||| ||||||  | | ||||  |||| |||||| ||| |||| |||||||||| ||||  ||||| ||||||||| ||| |||||||||    
T  24979961 gacaacttttgtgaaaacttttctctttcatactcacgttatgtttttcctttatctctctattactttgattttcatgtcaatacatactttttctttg 24980060  T
Q  523 taa 525  Q
    |||    
T  24980061 taa 24980063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 578
Target Start/End: Complemental strand, 25338129 - 25338083
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacat 578  Q
    |||||||||||  |||||| |||||||||||||||||||||| ||||    
T  25338129 atatttgtatattcactttatgacaactttctctctcatatttacat 25338083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Complemental strand, 754437 - 754380
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||| |||||||||| |||| |||||||||  |||||| || ||||||||||||    
T  754437 tttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaa 754380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 5522673 - 5522640
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||| |||||||||||||||||||    
T  5522673 tttgtgacaactttatctctcatattcacattat 5522640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 8645344 - 8645377
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  8645344 tttgtgacaactttctctctcatactcacattat 8645377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 13423004 - 13423037
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  13423004 tttgtgacaactttctctctcatactcacattat 13423037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 15974643 - 15974676
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    ||||| ||||||||||||||||||||||||||||    
T  15974643 tttgttacaactttctctctcatattcacattat 15974676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 506
Target Start/End: Original strand, 24900804 - 24900884
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaat 506  Q
    ||||| ||||||||||||||| ||   |||| |||||||||| | |||||||| |||||||||| |||| ||||| ||| ||||    
T  24900804 gacaacttttgtgacaactttctt---tcatattcacattatatttttactttctctctctattgctttggtttttgtgccaat 24900884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 25811874 - 25811841
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  25811874 tttgtgacaactttctctctcatactcacattat 25811841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 28630134 - 28630167
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  28630134 tttgtgacaactttctctctcatactcacattat 28630167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 32644631 - 32644680
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||| | ||| |||||||||||||||||||| |||||||||    
T  32644631 atatttgtacaactattttttgacaactttctctctcatactcacattat 32644680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 34047422 - 34047455
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  34047422 tttgtgacaactttctctctcatactcacattat 34047455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Complemental strand, 35213560 - 35213503
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||| |||||||||| |||| |||||||||  |||||| || ||||||||||||    
T  35213560 tttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaa 35213503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 2242057 - 2242025
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  2242057 tttgtgacaactttctctctcatactcacatta 2242025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 533 - 581
Target Start/End: Original strand, 12177586 - 12177634
Alignment:
Q  533 tatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||||||| ||| | |||||||||||||||||| ||||| |||||||||    
T  12177586 tatttgtacaactattttgtgacaactttctctttcatactcacattat 12177634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 541 - 581
Target Start/End: Original strand, 14094939 - 14094979
Alignment:
Q  541 taaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||| ||||| |||||||||||||||||||| |||||||||    
T  14094939 taacaactttttgacaactttctctctcatactcacattat 14094979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 18141336 - 18141304
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  18141336 tttgtgacaactttctctctcatactcacatta 18141304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 20822903 - 20822871
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  20822903 tttgtgacaactttctctctcatactcacatta 20822871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 456 - 508
Target Start/End: Complemental strand, 22079574 - 22079522
Alignment:
Q  456 tcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatac 508  Q
    ||||||||||| |||||||| |||||||||| ||||  |||| ||||||||||    
T  22079574 tcacattatgtttttactttctctctctattgctttgatttttgtgtcaatac 22079522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 29383590 - 29383630
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  29383590 actttttgacaactttctctctcatactcacattatactct 29383630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 35554167 - 35554113
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    |||||||||||| |||||| |||||||||||||||||||| ||||||||| ||||    
T  35554167 atatttgtataatcactttttgacaactttctctctcatactcacattatcctct 35554113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 43169805 - 43169751
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| ||||| |||||||||||||| ||||||||| ||||||||||||||    
T  43169805 atatttgtacaaccattttgtgacaactttttctctcatactcacattattctct 43169751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 424 - 530
Target Start/End: Complemental strand, 45186593 - 45186489
Alignment:
Q  424 acaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgt 523  Q
    ||||||||||||||||||||  | ||||||| ||||||||| | |||||||| |||||||||| ||||  ||||| ||||||||| || |||||| ||||    
T  45186593 acaatttttgtgacaacttt-ctctctcatgctcacattatatttttactttctctctctattactttgattttcttgtcaatacata-cttttcgttgt 45186496  T
Q  524 aagagta 530  Q
    || ||||    
T  45186495 aaaagta 45186489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 23585148 - 23585188
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  23585148 actttgtgacaactttctctctcatactcacattattctct 23585188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 23599971 - 23600011
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  23599971 actttgtgacaactttctctctcatactcacattattctct 23600011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 426 - 525
Target Start/End: Complemental strand, 24095445 - 24095348
Alignment:
Q  426 aatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||||||||||||| | | |||||  ||||||||| | |||||||| | |||||||| |||| |||||||||  ||||||||| ||||||||||||    
T  24095445 aatttttgtgacaactttctct-ctcatactcacattattt-tttactttatttctctattgctttggttttcgtgcaaatacctactttttctttgtaa 24095348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 510
Target Start/End: Complemental strand, 42358681 - 42358595
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacct 510  Q
    ||||||||||||||||||||| | | |||||  ||||||||| | |||||||| |||||||||| ||||  |||| ||||||||||||    
T  42358681 gacaatttttgtgacaactttctct-ctcatactcacattatctttttactttatctctctattgctttgatttttgtgtcaatacct 42358595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 532 - 579
Target Start/End: Original strand, 47683809 - 47683856
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacatt 579  Q
    ||||||||| ||||| |||||||||||||||||||||||| |||||||    
T  47683809 atatttgtacaaccattttgtgacaactttctctctcatactcacatt 47683856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 582
Target Start/End: Original strand, 31997821 - 31997871
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattatt 582  Q
    ||||||||| |||||||||||||||||||||| | ||||| ||||||||||    
T  31997821 atatttgtacaaccactttgtgacaactttctttttcatactcacattatt 31997871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 510
Target Start/End: Complemental strand, 36671056 - 36670971
Alignment:
Q  424 acaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacct 510  Q
    |||||||||||||||||||| || ||||||  ||||||||| | |||||||| |||||||||| |||| ||||| ||| || |||||    
T  36671056 acaatttttgtgacaacttt-ttctctcatactcacattatctttttactttttctctctattgctttggtttttgtgccactacct 36670971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 460 - 510
Target Start/End: Original strand, 51982163 - 51982213
Alignment:
Q  460 attatgtctttactttgtctctctatttctttagttttcgtgtcaatacct 510  Q
    ||||||| |||||||| |||||||||| |||||||||| ||||||||||||    
T  51982163 attatgtttttactttctctctctattgctttagtttttgtgtcaatacct 51982213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 26550273 - 26550306
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||||||||||||||    
T  26550273 tttgtgacaactttctctctcatattcacattat 26550306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 33939271 - 33939304
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||||||||||||||    
T  33939271 tttgtgacaactttctctctcatattcacattat 33939304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 548 - 580
Target Start/End: Original strand, 26772404 - 26772436
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||||||||||||    
T  26772404 tttgtgacaactttctctctcatattcacatta 26772436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 546 - 586
Target Start/End: Complemental strand, 32457793 - 32457753
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    |||||||||||||||||||||||||| ||||||||| ||||    
T  32457793 actttgtgacaactttctctctcatactcacattatactct 32457753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 548 - 580
Target Start/End: Original strand, 37302581 - 37302613
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||||||||||||    
T  37302581 tttgtgacaactttctctctcatattcacatta 37302613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 456 - 508
Target Start/End: Complemental strand, 44813458 - 44813406
Alignment:
Q  456 tcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatac 508  Q
    ||||||||| | |||||||| |||||||||| |||| ||||||||||||||||    
T  44813458 tcacattatatttttactttatctctctattgctttggttttcgtgtcaatac 44813406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 525
Target Start/End: Complemental strand, 13348178 - 13348077
Alignment:
Q  422 agacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttcttt 521  Q
    ||||||||||||||| |||||| | ||| |||  ||||| ||||| ||||| || |||||||||| |||| ||||| || ||||||||| | ||||||||    
T  13348178 agacaatttttgtgataactttctcttc-catactcacaatatgtttttaccttctctctctattgctttggtttttgtatcaatacct-cattttcttt 13348081  T
Q  522 gtaa 525  Q
    ||||    
T  13348080 gtaa 13348077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 508
Target Start/End: Original strand, 28700495 - 28700573
Alignment:
Q  429 ttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatac 508  Q
    |||| |||||||||||| | |||||  ||||||||||| |||||||| |||||||||| |||| ||||| ||| ||||||    
T  28700495 ttttttgacaactttatct-ctcatactcacattatgtttttactttctctctctattgctttggtttttgtgccaatac 28700573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 578
Target Start/End: Original strand, 28884498 - 28884545
Alignment:
Q  531 aatatttgtataaccactttgtgacaactttctctctcatattcacat 578  Q
    |||||||||| ||||| | |||||||||||||||||||||| ||||||    
T  28884498 aatatttgtacaaccattatgtgacaactttctctctcatactcacat 28884545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 586
Target Start/End: Complemental strand, 52431253 - 52431198
Alignment:
Q  531 aatatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||| || || || ||| ||| |||||||||||||||||||||||||||||||    
T  52431253 aatatttatacaatcattttatgataactttctctctcatattcacattattctct 52431198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 507
Target Start/End: Original strand, 54195400 - 54195451
Alignment:
Q  456 tcacattatgtctttactttgtctctctatttctttagttttcgtgtcaata 507  Q
    ||||||||| | |||||||| |||||||||| || |||||||||||||||||    
T  54195400 tcacattatttttttactttatctctctattactatagttttcgtgtcaata 54195451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 288761 - 288795
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  288761 tttgtgacaactttctctctcatactcacattatt 288795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 510
Target Start/End: Complemental strand, 1796064 - 1796002
Alignment:
Q  448 tctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacct 510  Q
    ||||||||||||||||||| ||||| || ||||| ||||  ||||||||| |||| |||||||    
T  1796064 tctcatgttcacattatgtttttacattctctctttattgttttagtttttgtgttaatacct 1796002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 570
Target Start/End: Original strand, 3483140 - 3483178
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcat 570  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  3483140 atatttgtacaaccactttgtgacgactttctctctcat 3483178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 5244264 - 5244298
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  5244264 tttgtgacaactttctctctcatactcacattatt 5244298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 509
Target Start/End: Complemental strand, 6178468 - 6178383
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacc 509  Q
    ||||| ||||||||||| ||| | | |||||  ||||||||||| |||||||| |||||||||| ||||  |||| |||||||||||    
T  6178468 gacaacttttgtgacaattttctct-ctcatactcacattatgtttttactttctctctctattgctttgatttttgtgtcaatacc 6178383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 20080109 - 20080143
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  20080109 tttgtgacaactttctctctcatactcacattatt 20080143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 24095441 - 24095407
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  24095441 tttgtgacaactttctctctcatactcacattatt 24095407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 525
Target Start/End: Original strand, 46019491 - 46019591
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||| ||||||||||||||| | | |||||  ||||||||  | |||||||| |||||||||| |||| ||||||||   |||||||| ||||||||||    
T  46019491 gacaacttttgtgacaactttctct-ctcatactcacattactt-tttactttatctctctattgctttggttttcgtacaaatacctatcttttctttg 46019588  T
Q  523 taa 525  Q
    |||    
T  46019589 taa 46019591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 49417611 - 49417645
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  49417611 tttgtgacaactttctctctcatactcacattatt 49417645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 49761343 - 49761377
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  49761343 tttgtgacaactttctctctcatactcacattatt 49761377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 510
Target Start/End: Original strand, 50314685 - 50314739
Alignment:
Q  456 tcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacct 510  Q
    ||||||||||| |||||||| |||||||||| ||||  |||| ||||||||||||    
T  50314685 tcacattatgtttttactttctctctctattactttgatttttgtgtcaatacct 50314739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 460 - 521
Target Start/End: Original strand, 9311105 - 9311165
Alignment:
Q  460 attatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttcttt 521  Q
    ||||||| |||||||| |||| |||||  ||| ||||||||||||||||||| |||||||||    
T  9311105 attatgtttttactttctctccctattgttttggttttcgtgtcaataccta-cttttcttt 9311165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 9692761 - 9692794
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    ||||||| ||||||||||||||||||||||||||    
T  9692761 tttgtgataactttctctctcatattcacattat 9692794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 14207293 - 14207260
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  14207293 tttgtgacaactttctctctcatactcacattat 14207260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 14215041 - 14215008
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  14215041 tttgtgacaactttctctctcatactcacattat 14215008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 19150354 - 19150321
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||||| |||||||    
T  19150354 tttgtgacaactttctctctcatatttacattat 19150321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 26014847 - 26014880
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  26014847 tttgtgacaactttctctctcatactcacattat 26014880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 29917059 - 29917026
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  29917059 tttgtgacaactttctctctcatactcacattat 29917026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 29966212 - 29966179
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  29966212 tttgtgacaactttctctctcatactcacattat 29966179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 32924304 - 32924271
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||||| |||||||    
T  32924304 tttgtgacaactttctctctcatatttacattat 32924271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 36318334 - 36318285
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||| ||||||| |||||| ||||||||||||| ||| |||||    
T  36318334 atatttgtatatccactttttgacaattttctctctcatactcatattat 36318285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 525
Target Start/End: Complemental strand, 37057076 - 37057000
Alignment:
Q  448 tctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||| ||||||  | |||||||| ||||||||||  ||| ||||| |||||||||||| | ||||||||||||    
T  37057076 tctcatgtttacattaattttttactttatctctctattgtttttgtttttgtgtcaatacct-cattttctttgtaa 37057000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 38926663 - 38926696
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  38926663 tttgtgacaactttctctctcatactcacattat 38926696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 41505526 - 41505559
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  41505526 tttgtgacaactttctctctcatactcacattat 41505559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 42358674 - 42358641
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  42358674 tttgtgacaactttctctctcatactcacattat 42358641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 44413956 - 44413923
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  44413956 tttgtgacaactttctctctcatactcacattat 44413923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 45293064 - 45293031
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  45293064 tttgtgacaactttctctctcatactcacattat 45293031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 46253694 - 46253751
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||| |||||||||| |||| |||||||||  |||||| || ||||||||||||    
T  46253694 tttactttatctctctattgctttggttttcgtgcaaataccaacattttctttgtaa 46253751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 46623942 - 46623975
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||| |||||||||||||    
T  46623942 tttgtgacaactttctctctgatattcacattat 46623975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Original strand, 46952957 - 46953006
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| ||||| ||| ||| |||||||||||||||| |||||||||    
T  46952957 atatttgtacaaccattttttgataactttctctctcatactcacattat 46953006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 581
Target Start/End: Complemental strand, 48490565 - 48490516
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||| |||||||||   |||||||||||||||||| |||||||||    
T  48490565 atatttgtacaaccacttttgtacaactttctctctcatactcacattat 48490516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 586
Target Start/End: Original strand, 48649608 - 48649653
Alignment:
Q  541 taaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    |||| ||||| |||||||||||||||||||| ||||||||| ||||    
T  48649608 taacaactttttgacaactttctctctcatactcacattatcctct 48649653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 525
Target Start/End: Complemental strand, 55322727 - 55322659
Alignment:
Q  456 tcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    ||||||||||| |||||||| ||||||||||| ||| |||| |||||| |||| ||  ||||||||||||    
T  55322727 tcacattatgtttttactttctctctctatttttttggtttccgtgtcgatacata-tttttctttgtaa 55322659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 554 - 582
Target Start/End: Complemental strand, 3347151 - 3347123
Alignment:
Q  554 acaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||||||||    
T  3347151 acaactttctctctcatattcacattatt 3347123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 3953510 - 3953478
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  3953510 tttgtgacaactttctctctcatactcacatta 3953478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 6126487 - 6126527
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  6126487 actttttgacaactttctctctcatactcacattatcctct 6126527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 9027906 - 9027946
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| ||| |||||||||||||||| ||||||||||||||    
T  9027906 actttttgataactttctctctcatactcacattattctct 9027946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 456 - 521
Target Start/End: Complemental strand, 9719463 - 9719396
Alignment:
Q  456 tcacattatgtctttactt--tgtctctctatttctttagttttcgtgtcaatacctaccttttcttt 521  Q
    |||||||||||||||||||  | |||||||||| ||||  |||||||||| |||||| | ||||||||    
T  9719463 tcacattatgtctttactttctctctctctattgctttgattttcgtgtccataccttctttttcttt 9719396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 541 - 577
Target Start/End: Complemental strand, 11335345 - 11335309
Alignment:
Q  541 taaccactttgtgacaactttctctctcatattcaca 577  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  11335345 taacaactttttgacaactttctctctcatattcaca 11335309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Original strand, 16479667 - 16479699
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  16479667 tttgtgacaactttctctctcatactcacatta 16479699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 584
Target Start/End: Complemental strand, 27168717 - 27168681
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattattct 584  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  27168717 tttgtgacaactttctctctcatactcatattattct 27168681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 33007393 - 33007433
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||| ||||||||||||| ||||||||||||||    
T  33007393 actttttgacaattttctctctcatactcacattattctct 33007433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Complemental strand, 37303112 - 37303072
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  37303112 actttttgacaactttctctctcatactcacattatcctct 37303072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 37303416 - 37303456
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  37303416 actttttgacaactttctctctcatactcacattatcctct 37303456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Complemental strand, 37894278 - 37894246
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  37894278 tttgtgacaactttctctctcatactcacatta 37894246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 39540268 - 39540308
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||| ||||||||||||| ||||||||||||||    
T  39540268 actttttgacaattttctctctcatactcacattattctct 39540308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 426 - 482
Target Start/End: Complemental strand, 42672874 - 42672819
Alignment:
Q  426 aatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctc 482  Q
    |||||||||||||| ||| || |||||| |||||||||||| |||||||| ||||||    
T  42672874 aatttttgtgacaaattt-ttctctcatattcacattatgtttttactttctctctc 42672819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Original strand, 46019498 - 46019530
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  46019498 tttgtgacaactttctctctcatactcacatta 46019530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 47988528 - 47988488
Alignment:
Q  541 taaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||| ||||| |||||||||||||||||||| |||||||||    
T  47988528 taacaactttttgacaactttctctctcatactcacattat 47988488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 47997815 - 47997775
Alignment:
Q  541 taaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||| ||||| |||||||||||||||||||| |||||||||    
T  47997815 taacaactttttgacaactttctctctcatactcacattat 47997775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 48007102 - 48007062
Alignment:
Q  541 taaccactttgtgacaactttctctctcatattcacattat 581  Q
    |||| ||||| |||||||||||||||||||| |||||||||    
T  48007102 taacaactttttgacaactttctctctcatactcacattat 48007062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 49196729 - 49196769
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    |||||||||||| ||||||||||||| ||||||||| ||||    
T  49196729 actttgtgacaattttctctctcatactcacattatactct 49196769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 580
Target Start/End: Original strand, 55400035 - 55400067
Alignment:
Q  548 tttgtgacaactttctctctcatattcacatta 580  Q
    |||||||||||||||||||||||| ||||||||    
T  55400035 tttgtgacaactttctctctcatactcacatta 55400067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 31652 - 31598
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||||||| ||||| ||| |||||||||||||||||||| ||||||||| ||||    
T  31652 atatttgtacaaccattttttgacaactttctctctcatactcacattatactct 31598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 366329 - 366362
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    ||||||||||||||||||||||||||||||||||    
T  366329 tttgtgacaactttctctctcatattcacattat 366362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 119866 - 119906
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    |||||| ||||||||| | ||||||||||||||||||||||    
T  119866 actttgggacaactttgtatctcatattcacattattctct 119906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 34441 - 34481
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    |||||||||||||||||||||||||| ||||||||| ||||    
T  34441 actttgtgacaactttctctctcatactcacattatactct 34481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 11000 - 11034
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattatt 582  Q
    |||||||||||||||||||||||| ||||||||||    
T  11000 tttgtgacaactttctctctcatactcacattatt 11034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 578
Target Start/End: Complemental strand, 3323 - 3277
Alignment:
Q  532 atatttgtataaccactttgtgacaactttctctctcatattcacat 578  Q
    ||||||||| ||||||||| | |||||||||||||||||| ||||||    
T  3323 atatttgtacaaccactttctcacaactttctctctcatactcacat 3277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 525
Target Start/End: Original strand, 38454 - 38554
Alignment:
Q  423 gacaatttttgtgacaactttattttctcatgttcacattatgtctttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttg 522  Q
    ||||| ||||||||||||||| ||| |||||  |||| |||  | |||||||| |||||||||| |||| |||||||||  |||||| || |||||||||    
T  38454 gacaacttttgtgacaactttcttt-ctcatactcacgttactt-tttactttatctctctattgctttggttttcgtgcgaataccaactttttctttg 38551  T
Q  523 taa 525  Q
    |||    
T  38552 taa 38554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 16823 - 16790
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  16823 tttgtgacaactttctctctcatactcacattat 16790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 10972 - 11005
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  10972 tttgtgacaactttctctctcatactcacattat 11005  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 56021 - 56054
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattat 581  Q
    |||||||||||||||||||||||| |||||||||    
T  56021 tttgtgacaactttctctctcatactcacattat 56054  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Complemental strand, 134302 - 134245
Alignment:
Q  468 tttactttgtctctctatttctttagttttcgtgtcaatacctaccttttctttgtaa 525  Q
    |||||||| ||||| ||||  ||| |||||||||||||||||||  ||||||||||||    
T  134302 tttactttatctctttattgttttggttttcgtgtcaatacctattttttctttgtaa 134245  T

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Target: scaffold0519 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 548 - 584
Target Start/End: Original strand, 11816 - 11852
Alignment:
Q  548 tttgtgacaactttctctctcatattcacattattct 584  Q
    |||||||||||||||||||||||| | ||||||||||    
T  11816 tttgtgacaactttctctctcatacttacattattct 11852  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 6850 - 6890
Alignment:
Q  546 actttgtgacaactttctctctcatattcacattattctct 586  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  6850 actttttgacaactttctctctcatactcacattatcctct 6890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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