View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9250_low_14 (Length: 227)

Name: NF9250_low_14
Description: NF9250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9250_low_14
NF9250_low_14
[»] chr6 (50 HSPs)
chr6 (1-189)||(29518849-29519037)
chr6 (5-189)||(2378059-2378243)
chr6 (2-189)||(10074032-10074219)
chr6 (23-189)||(3409611-3409777)
chr6 (1-163)||(16107990-16108154)
chr6 (32-189)||(10074404-10074560)
chr6 (64-189)||(29518495-29518620)
chr6 (64-189)||(32741171-32741296)
chr6 (64-189)||(3409251-3409376)
chr6 (27-188)||(2578485-2578647)
chr6 (64-178)||(35210196-35210310)
chr6 (64-189)||(3058218-3058343)
chr6 (64-189)||(26544041-26544166)
chr6 (6-178)||(16454838-16455013)
chr6 (63-189)||(3415449-3415575)
chr6 (1-189)||(10073657-10073843)
chr6 (64-178)||(14748390-14748504)
chr6 (74-178)||(2377756-2377860)
chr6 (64-178)||(1127352-1127466)
chr6 (1-173)||(2579549-2579721)
chr6 (77-178)||(32460632-32460733)
chr6 (72-189)||(2579913-2580030)
chr6 (65-188)||(1846741-1846864)
chr6 (74-189)||(16107680-16107795)
chr6 (72-178)||(593761-593867)
chr6 (75-189)||(1950226-1950340)
chr6 (47-188)||(2578877-2579016)
chr6 (74-178)||(16454577-16454681)
chr6 (32-189)||(2579150-2579305)
chr6 (72-189)||(10911565-10911683)
chr6 (78-178)||(2843560-2843661)
chr6 (78-178)||(9062402-9062501)
chr6 (75-178)||(6999848-6999951)
chr6 (34-189)||(8481888-8482043)
chr6 (6-178)||(6071064-6071238)
chr6 (74-189)||(5832068-5832182)
chr6 (67-189)||(5958644-5958766)
chr6 (32-145)||(35210449-35210551)
chr6 (2-188)||(2975482-2975668)
chr6 (72-189)||(12092523-12092640)
chr6 (2-131)||(33605906-33606034)
chr6 (72-178)||(12085086-12085191)
chr6 (109-155)||(14789279-14789325)
chr6 (76-155)||(17135144-17135223)
chr6 (140-175)||(22605310-22605345)
chr6 (72-178)||(12071743-12071849)
chr6 (6-63)||(12092201-12092261)
chr6 (72-178)||(31714671-31714775)
chr6 (140-178)||(21130109-21130147)
chr6 (140-189)||(11637762-11637811)
[»] chr7 (60 HSPs)
chr7 (1-189)||(7553952-7554142)
chr7 (1-190)||(14681437-14681628)
chr7 (39-173)||(37533067-37533201)
chr7 (22-178)||(22566714-22566872)
chr7 (24-189)||(30244220-30244387)
chr7 (21-189)||(30245024-30245194)
chr7 (9-189)||(45434572-45434753)
chr7 (66-189)||(29157559-29157682)
chr7 (72-178)||(1085668-1085774)
chr7 (72-178)||(7517580-7517686)
chr7 (72-189)||(23418-23535)
chr7 (72-189)||(16569196-16569313)
chr7 (72-189)||(16596349-16596466)
chr7 (74-189)||(6054562-6054677)
chr7 (79-189)||(11845198-11845308)
chr7 (64-188)||(37533406-37533530)
chr7 (72-178)||(36939785-36939891)
chr7 (72-189)||(22567080-22567196)
chr7 (2-178)||(1085300-1085482)
chr7 (2-142)||(30244628-30244771)
chr7 (2-145)||(30245421-30245567)
chr7 (74-189)||(45754718-45754832)
chr7 (74-189)||(47129097-47129212)
chr7 (80-178)||(19122740-19122837)
chr7 (72-178)||(24177435-24177541)
chr7 (72-178)||(40094826-40094932)
chr7 (78-189)||(34218075-34218186)
chr7 (74-189)||(45433243-45433358)
chr7 (43-145)||(30255308-30255412)
chr7 (72-177)||(36622960-36623065)
chr7 (72-178)||(118353-118459)
chr7 (72-178)||(8128493-8128599)
chr7 (72-173)||(40230348-40230449)
chr7 (75-189)||(24838742-24838857)
chr7 (72-178)||(36534836-36534942)
chr7 (77-178)||(30032572-30032673)
chr7 (72-189)||(43241495-43241612)
chr7 (72-160)||(28301613-28301701)
chr7 (2-122)||(40094502-40094621)
chr7 (75-167)||(41910657-41910749)
chr7 (75-189)||(9901648-9901760)
chr7 (2-189)||(37345846-37346035)
chr7 (75-176)||(20599317-20599418)
chr7 (141-206)||(23569026-23569091)
chr7 (72-178)||(41854635-41854740)
chr7 (72-140)||(36109007-36109075)
chr7 (114-189)||(30253534-30253609)
chr7 (77-177)||(44361517-44361616)
chr7 (139-209)||(21416162-21416232)
chr7 (118-178)||(28300305-28300366)
chr7 (2-91)||(45697841-45697929)
chr7 (26-189)||(4124129-4124293)
chr7 (66-109)||(14681281-14681324)
chr7 (21-68)||(48243241-48243288)
chr7 (93-189)||(37167808-37167898)
chr7 (6-85)||(10342192-10342271)
chr7 (74-124)||(36967335-36967385)
chr7 (139-178)||(21619097-21619136)
chr7 (25-65)||(28300365-28300405)
chr7 (153-189)||(47129450-47129486)
[»] chr3 (78 HSPs)
chr3 (1-189)||(22304497-22304686)
chr3 (1-189)||(37990680-37990869)
chr3 (6-189)||(54017857-54018042)
chr3 (23-178)||(4823606-4823761)
chr3 (22-188)||(15773140-15773308)
chr3 (18-178)||(21832395-21832554)
chr3 (2-178)||(32462610-32462790)
chr3 (64-188)||(39389062-39389186)
chr3 (22-178)||(29644633-29644792)
chr3 (72-189)||(32589704-32589820)
chr3 (10-189)||(3135114-3135293)
chr3 (74-189)||(35946524-35946639)
chr3 (26-178)||(42342142-42342296)
chr3 (74-189)||(43346832-43346947)
chr3 (34-127)||(22304208-22304301)
chr3 (63-189)||(39934996-39935124)
chr3 (21-175)||(41359820-41359971)
chr3 (74-189)||(52634678-52634792)
chr3 (72-178)||(29644954-29645060)
chr3 (72-178)||(33803304-33803410)
chr3 (72-189)||(12114603-12114720)
chr3 (72-189)||(42342429-42342546)
chr3 (74-189)||(37991018-37991133)
chr3 (72-189)||(15772854-15772971)
chr3 (72-189)||(25739466-25739583)
chr3 (2-189)||(9240079-9240266)
chr3 (72-191)||(54018237-54018356)
chr3 (64-189)||(50612488-50612618)
chr3 (37-189)||(22303996-22304143)
chr3 (25-189)||(11661902-11662069)
chr3 (72-189)||(1634355-1634473)
chr3 (72-189)||(8327904-8328021)
chr3 (74-189)||(32462941-32463057)
chr3 (72-189)||(45395694-45395811)
chr3 (64-188)||(51886553-51886671)
chr3 (74-189)||(49336728-49336843)
chr3 (72-189)||(39914252-39914369)
chr3 (73-178)||(53118027-53118131)
chr3 (72-189)||(53577364-53577481)
chr3 (72-189)||(31190017-31190126)
chr3 (74-189)||(45901715-45901831)
chr3 (61-178)||(3384318-3384435)
chr3 (74-178)||(33175713-33175820)
chr3 (64-145)||(37726496-37726577)
chr3 (82-188)||(42584864-42584970)
chr3 (53-178)||(47964570-47964694)
chr3 (74-178)||(25755396-25755500)
chr3 (98-174)||(33362349-33362425)
chr3 (75-164)||(7767380-7767469)
chr3 (72-169)||(44160605-44160702)
chr3 (74-188)||(3135496-3135617)
chr3 (72-178)||(39336281-39336387)
chr3 (74-139)||(11661537-11661602)
chr3 (75-184)||(46546371-46546480)
chr3 (72-128)||(43346650-43346706)
chr3 (130-178)||(22303711-22303759)
chr3 (122-178)||(52634990-52635046)
chr3 (72-178)||(47964967-47965073)
chr3 (142-188)||(54017590-54017636)
chr3 (74-171)||(25991405-25991502)
chr3 (2-61)||(8328308-8328368)
chr3 (114-178)||(12749211-12749275)
chr3 (127-178)||(17731956-17732007)
chr3 (127-178)||(19033187-19033238)
chr3 (75-178)||(25317161-25317264)
chr3 (114-189)||(39336011-39336086)
chr3 (26-68)||(52634889-52634931)
chr3 (139-189)||(53596027-53596077)
chr3 (139-189)||(53596342-53596392)
chr3 (27-96)||(2299930-2300000)
chr3 (72-104)||(12747878-12747910)
chr3 (140-180)||(17735041-17735081)
chr3 (140-180)||(19036310-19036350)
chr3 (139-223)||(53596542-53596626)
chr3 (140-178)||(16871011-16871049)
chr3 (77-138)||(36986040-36986101)
chr3 (77-138)||(37011479-37011540)
chr3 (135-171)||(50329391-50329427)
[»] chr1 (72 HSPs)
chr1 (1-177)||(44290511-44290688)
chr1 (5-189)||(48588529-48588714)
chr1 (6-151)||(3537226-3537372)
chr1 (2-189)||(34364852-34365042)
chr1 (5-178)||(22077547-22077719)
chr1 (1-189)||(26661563-26661754)
chr1 (22-178)||(41157323-41157481)
chr1 (62-173)||(44290882-44290993)
chr1 (2-189)||(37556038-37556228)
chr1 (64-189)||(3550712-3550837)
chr1 (74-189)||(17294579-17294694)
chr1 (66-189)||(32594757-32594880)
chr1 (72-189)||(34364507-34364624)
chr1 (64-189)||(41759475-41759600)
chr1 (5-178)||(66139-66314)
chr1 (45-189)||(11977251-11977397)
chr1 (21-178)||(30630690-30630846)
chr1 (64-178)||(3537651-3537765)
chr1 (72-189)||(29798199-29798316)
chr1 (72-173)||(41142372-41142473)
chr1 (64-189)||(50052064-50052189)
chr1 (72-166)||(41184489-41184583)
chr1 (72-188)||(41156991-41157107)
chr1 (1-104)||(50051777-50051881)
chr1 (2-187)||(22077153-22077349)
chr1 (72-178)||(31767213-31767319)
chr1 (80-189)||(14318875-14318984)
chr1 (73-178)||(40082408-40082512)
chr1 (76-189)||(9955911-9956026)
chr1 (74-189)||(26661939-26662054)
chr1 (72-178)||(5320017-5320123)
chr1 (63-189)||(45494015-45494146)
chr1 (69-178)||(38804407-38804516)
chr1 (74-178)||(34649440-34649544)
chr1 (72-175)||(3875386-3875489)
chr1 (72-177)||(66525-66630)
chr1 (63-189)||(44043813-44043944)
chr1 (72-189)||(24600355-24600472)
chr1 (72-189)||(37850641-37850758)
chr1 (72-189)||(39066241-39066358)
chr1 (64-178)||(32168750-32168853)
chr1 (72-147)||(45084382-45084457)
chr1 (75-189)||(37555733-37555846)
chr1 (78-178)||(5575110-5575210)
chr1 (72-166)||(24132049-24132143)
chr1 (73-189)||(22793279-22793396)
chr1 (2-124)||(47379891-47380012)
chr1 (3-131)||(50469180-50469306)
chr1 (82-173)||(5528811-5528902)
chr1 (72-166)||(44685456-44685551)
chr1 (72-153)||(21378118-21378199)
chr1 (72-178)||(22077881-22077986)
chr1 (72-178)||(19283507-19283613)
chr1 (6-178)||(24448212-24448383)
chr1 (74-189)||(45839629-45839748)
chr1 (72-178)||(1188640-1188746)
chr1 (6-57)||(41184198-41184249)
chr1 (72-189)||(1187405-1187522)
chr1 (99-178)||(4956218-4956297)
chr1 (72-119)||(35154150-35154197)
chr1 (72-138)||(4878803-4878869)
chr1 (121-166)||(41184152-41184197)
chr1 (114-178)||(10351202-10351266)
chr1 (2-68)||(1188392-1188457)
chr1 (64-137)||(4266875-4266948)
chr1 (6-57)||(3537495-3537547)
chr1 (81-140)||(30630912-30630972)
chr1 (26-90)||(47380258-47380323)
chr1 (143-189)||(11977015-11977061)
chr1 (87-148)||(44091909-44091970)
chr1 (145-189)||(9956214-9956258)
chr1 (127-187)||(35154046-35154106)
[»] chr8 (74 HSPs)
chr8 (1-189)||(3669988-3670177)
chr8 (1-188)||(1013913-1014101)
chr8 (2-178)||(40518512-40518688)
chr8 (22-189)||(9309303-9309472)
chr8 (63-189)||(3669678-3669804)
chr8 (5-189)||(30359539-30359726)
chr8 (23-178)||(34835160-34835315)
chr8 (2-176)||(45122933-45123108)
chr8 (2-178)||(8918816-8918994)
chr8 (27-178)||(34835427-34835581)
chr8 (27-178)||(34835693-34835847)
chr8 (62-189)||(30441071-30441202)
chr8 (74-178)||(3038342-3038446)
chr8 (21-144)||(18372342-18372465)
chr8 (24-189)||(6731856-6732012)
chr8 (22-189)||(45121697-45121865)
chr8 (2-178)||(45122560-45122730)
chr8 (72-189)||(45122098-45122215)
chr8 (75-178)||(147454-147557)
chr8 (21-144)||(18372785-18372907)
chr8 (74-189)||(30359273-30359388)
chr8 (74-189)||(34834878-34834993)
chr8 (6-176)||(18372988-18373157)
chr8 (64-189)||(1014286-1014411)
chr8 (2-178)||(9482656-9482829)
chr8 (6-178)||(18371713-18371881)
chr8 (64-189)||(20870614-20870741)
chr8 (2-189)||(147757-147937)
chr8 (74-189)||(33113408-33113523)
chr8 (72-178)||(45121962-45122068)
chr8 (74-178)||(25561867-25561972)
chr8 (79-178)||(70326-70425)
chr8 (72-187)||(5420651-5420766)
chr8 (72-178)||(9608745-9608851)
chr8 (74-178)||(1513967-1514071)
chr8 (74-178)||(37544542-37544646)
chr8 (97-188)||(9483229-9483320)
chr8 (66-188)||(40579548-40579670)
chr8 (82-178)||(18372046-18372142)
chr8 (72-168)||(41972158-41972254)
chr8 (6-189)||(4154322-4154506)
chr8 (72-178)||(6876914-6877021)
chr8 (21-116)||(18372485-18372580)
chr8 (74-178)||(40518071-40518177)
chr8 (64-150)||(41416251-41416335)
chr8 (76-178)||(18380069-18380171)
chr8 (72-177)||(9308977-9309084)
chr8 (74-189)||(8794113-8794228)
chr8 (66-178)||(32305478-32305583)
chr8 (43-189)||(6651476-6651611)
chr8 (75-178)||(32640584-32640682)
chr8 (75-178)||(43274831-43274934)
chr8 (72-178)||(4154718-4154824)
chr8 (74-178)||(18372658-18372758)
chr8 (75-162)||(3037776-3037865)
chr8 (72-178)||(9507777-9507888)
chr8 (72-189)||(5915872-5915984)
chr8 (82-145)||(25561729-25561792)
chr8 (77-177)||(20130454-20130553)
chr8 (95-178)||(9609108-9609191)
chr8 (76-175)||(43398123-43398225)
chr8 (72-167)||(9620739-9620834)
chr8 (2-60)||(3038099-3038157)
chr8 (72-188)||(5274775-5274891)
chr8 (108-164)||(18373236-18373292)
chr8 (75-171)||(40991756-40991852)
chr8 (72-178)||(12283873-12283978)
chr8 (22-98)||(43274699-43274777)
chr8 (143-184)||(12156704-12156745)
chr8 (72-129)||(20995502-20995559)
chr8 (72-149)||(33831978-33832055)
chr8 (130-171)||(11442911-11442952)
chr8 (72-104)||(18645713-18645745)
chr8 (149-189)||(20995457-20995497)
[»] chr2 (74 HSPs)
chr2 (1-189)||(5542666-5542855)
chr2 (40-178)||(37106156-37106294)
chr2 (1-178)||(14745346-14745523)
chr2 (6-178)||(40679681-40679852)
chr2 (39-178)||(36178321-36178460)
chr2 (63-189)||(36178646-36178772)
chr2 (64-178)||(14745719-14745833)
chr2 (24-178)||(28531366-28531519)
chr2 (6-147)||(7598543-7598684)
chr2 (62-188)||(5543040-5543166)
chr2 (2-129)||(36785664-36785793)
chr2 (64-178)||(41283527-41283641)
chr2 (44-178)||(15880233-15880369)
chr2 (68-189)||(37105920-37106041)
chr2 (74-189)||(6421387-6421502)
chr2 (29-189)||(40733472-40733634)
chr2 (72-178)||(962598-962704)
chr2 (21-189)||(6422066-6422227)
chr2 (2-150)||(38796298-38796450)
chr2 (5-178)||(40733813-40733988)
chr2 (22-189)||(29676851-29677025)
chr2 (76-189)||(28254278-28254391)
chr2 (52-183)||(31468797-31468926)
chr2 (72-189)||(35580765-35580881)
chr2 (72-177)||(38796673-38796778)
chr2 (74-189)||(6712978-6713094)
chr2 (72-178)||(42514649-42514755)
chr2 (6-193)||(30323396-30323585)
chr2 (22-189)||(33561492-33561658)
chr2 (79-189)||(15511536-15511646)
chr2 (72-178)||(16542449-16542555)
chr2 (6-178)||(30313110-30313283)
chr2 (77-177)||(33731653-33731753)
chr2 (74-178)||(36005932-36006035)
chr2 (90-178)||(36178223-36178311)
chr2 (72-178)||(37632649-37632755)
chr2 (75-160)||(31899496-31899581)
chr2 (2-134)||(42514943-42515078)
chr2 (6-178)||(33953823-33953994)
chr2 (6-178)||(41678420-41678593)
chr2 (64-149)||(1769884-1769969)
chr2 (1-189)||(3673011-3673185)
chr2 (36-189)||(29873578-29873732)
chr2 (72-175)||(7598228-7598331)
chr2 (32-178)||(37894744-37894889)
chr2 (80-178)||(37895113-37895211)
chr2 (74-178)||(5367457-5367561)
chr2 (85-189)||(23346250-23346353)
chr2 (74-178)||(29874075-29874179)
chr2 (75-178)||(31259668-31259774)
chr2 (72-167)||(12529091-12529186)
chr2 (83-189)||(40163413-40163520)
chr2 (88-177)||(28254165-28254254)
chr2 (72-167)||(16590888-16590978)
chr2 (80-159)||(29676543-29676622)
chr2 (73-170)||(31385738-31385835)
chr2 (134-189)||(6421793-6421848)
chr2 (75-178)||(9231252-9231355)
chr2 (75-178)||(12910231-12910334)
chr2 (27-94)||(40734231-40734300)
chr2 (74-120)||(6421306-6421352)
chr2 (75-191)||(3594217-3594333)
chr2 (136-176)||(35580494-35580534)
chr2 (134-189)||(6421688-6421743)
chr2 (139-209)||(13792517-13792585)
chr2 (114-171)||(2336666-2336723)
chr2 (144-189)||(3672773-3672818)
chr2 (16-68)||(34481589-34481642)
chr2 (125-178)||(36784312-36784365)
chr2 (114-178)||(30312831-30312895)
chr2 (126-172)||(25390326-25390372)
chr2 (25-83)||(35580532-35580592)
chr2 (72-108)||(3672719-3672755)
chr2 (72-104)||(33954387-33954419)
[»] scaffold0734 (2 HSPs)
scaffold0734 (1-162)||(5704-5867)
scaffold0734 (72-189)||(5396-5514)
[»] chr5 (67 HSPs)
chr5 (1-189)||(6500751-6500939)
chr5 (3-189)||(624128-624313)
chr5 (2-189)||(3295056-3295246)
chr5 (2-178)||(13415812-13415990)
chr5 (2-189)||(26074539-26074729)
chr5 (64-178)||(32487386-32487499)
chr5 (45-189)||(26074187-26074330)
chr5 (21-173)||(26074839-26074993)
chr5 (64-178)||(18603172-18603286)
chr5 (64-189)||(6500443-6500567)
chr5 (72-189)||(40296356-40296473)
chr5 (65-178)||(41170627-41170740)
chr5 (63-189)||(9498695-9498821)
chr5 (9-178)||(24489258-24489424)
chr5 (64-189)||(27502077-27502202)
chr5 (79-189)||(11417018-11417128)
chr5 (72-189)||(15370099-15370216)
chr5 (6-178)||(36521948-36522120)
chr5 (69-189)||(36492258-36492378)
chr5 (74-173)||(26075219-26075318)
chr5 (75-189)||(25327938-25328052)
chr5 (73-178)||(299490-299595)
chr5 (74-178)||(6224198-6224302)
chr5 (75-189)||(3295386-3295498)
chr5 (74-188)||(42405638-42405752)
chr5 (72-189)||(35150007-35150123)
chr5 (72-189)||(41632782-41632899)
chr5 (72-178)||(12662704-12662810)
chr5 (72-178)||(36568619-36568725)
chr5 (6-167)||(31509555-31509718)
chr5 (64-189)||(623810-623935)
chr5 (69-178)||(29549307-29549416)
chr5 (74-178)||(1028569-1028673)
chr5 (82-178)||(34753077-34753173)
chr5 (33-189)||(38427518-38427664)
chr5 (9-189)||(36522278-36522459)
chr5 (64-177)||(5723844-5723957)
chr5 (84-189)||(33747783-33747888)
chr5 (64-147)||(7768842-7768925)
chr5 (74-167)||(42508614-42508707)
chr5 (98-178)||(15370428-15370508)
chr5 (74-190)||(35167878-35167994)
chr5 (74-152)||(26074320-26074398)
chr5 (75-178)||(2411010-2411113)
chr5 (72-178)||(26590962-26591068)
chr5 (74-189)||(300961-301068)
chr5 (2-107)||(13785732-13785837)
chr5 (75-157)||(35914852-35914934)
chr5 (74-153)||(39309686-39309764)
chr5 (75-178)||(41635243-41635346)
chr5 (74-189)||(13786042-13786157)
chr5 (139-209)||(13042606-13042676)
chr5 (74-167)||(42524719-42524811)
chr5 (1-67)||(9498411-9498478)
chr5 (75-132)||(6225047-6225104)
chr5 (86-167)||(31509745-31509826)
chr5 (64-112)||(5660290-5660338)
chr5 (139-209)||(13112604-13112674)
chr5 (72-114)||(35150747-35150789)
chr5 (72-114)||(35151038-35151080)
chr5 (151-203)||(36389307-36389359)
chr5 (129-189)||(36527136-36527196)
chr5 (40-84)||(15370380-15370426)
chr5 (130-189)||(32445943-32446002)
chr5 (152-206)||(13112782-13112836)
chr5 (109-175)||(19275566-19275631)
chr5 (64-121)||(22298956-22299014)
[»] scaffold0078 (2 HSPs)
scaffold0078 (1-189)||(5283-5474)
scaffold0078 (72-189)||(4982-5099)
[»] chr4 (93 HSPs)
chr4 (2-189)||(54108845-54109029)
chr4 (1-178)||(2740999-2741177)
chr4 (7-189)||(36629172-36629354)
chr4 (2-189)||(39404327-39404515)
chr4 (6-178)||(44620592-44620765)
chr4 (62-189)||(50630794-50630921)
chr4 (64-189)||(55933163-55933288)
chr4 (42-170)||(52884856-52884985)
chr4 (64-189)||(49880152-49880277)
chr4 (21-189)||(20826167-20826334)
chr4 (5-189)||(18932788-18932983)
chr4 (64-178)||(41370349-41370463)
chr4 (72-189)||(25483336-25483453)
chr4 (72-189)||(54017634-54017751)
chr4 (41-189)||(22028000-22028150)
chr4 (21-175)||(3244504-3244657)
chr4 (72-178)||(4955367-4955473)
chr4 (72-189)||(52884695-52884813)
chr4 (69-189)||(50002423-50002543)
chr4 (74-189)||(34646688-34646803)
chr4 (6-138)||(44621358-44621492)
chr4 (2-166)||(49076510-49076679)
chr4 (29-186)||(3341083-3341242)
chr4 (72-187)||(10245920-10246034)
chr4 (72-178)||(1731697-1731803)
chr4 (72-178)||(3340807-3340913)
chr4 (91-189)||(54936215-54936313)
chr4 (72-189)||(36608700-36608817)
chr4 (73-189)||(16888855-16888971)
chr4 (81-189)||(44620362-44620470)
chr4 (74-177)||(36572021-36572124)
chr4 (72-178)||(2740700-2740806)
chr4 (72-178)||(22183314-22183420)
chr4 (87-189)||(45496820-45496922)
chr4 (75-178)||(49302907-49303012)
chr4 (74-189)||(39792899-39793014)
chr4 (74-189)||(41707504-41707618)
chr4 (72-189)||(32941162-32941279)
chr4 (82-189)||(54343047-54343147)
chr4 (78-178)||(20825842-20825942)
chr4 (2-188)||(45489372-45489561)
chr4 (64-178)||(6975506-6975620)
chr4 (75-189)||(50459724-50459838)
chr4 (72-178)||(54741228-54741334)
chr4 (72-189)||(4390140-4390257)
chr4 (81-178)||(44621011-44621108)
chr4 (85-178)||(54017752-54017845)
chr4 (74-178)||(39404020-39404124)
chr4 (48-178)||(43174480-43174613)
chr4 (72-178)||(49076881-49076986)
chr4 (72-189)||(51768099-51768216)
chr4 (71-178)||(54108537-54108643)
chr4 (44-161)||(10246317-10246436)
chr4 (73-177)||(16889587-16889691)
chr4 (72-189)||(22028408-22028527)
chr4 (72-178)||(34004635-34004739)
chr4 (72-189)||(3700365-3700474)
chr4 (64-124)||(50788087-50788147)
chr4 (72-178)||(28034229-28034335)
chr4 (80-138)||(44620304-44620362)
chr4 (74-189)||(40067045-40067161)
chr4 (123-178)||(31691203-31691258)
chr4 (77-169)||(760194-760286)
chr4 (74-178)||(19504707-19504802)
chr4 (93-189)||(48111737-48111833)
chr4 (114-189)||(15841407-15841482)
chr4 (118-188)||(18879852-18879922)
chr4 (56-138)||(44620926-44621011)
chr4 (94-178)||(3271806-3271893)
chr4 (6-68)||(16889315-16889378)
chr4 (126-189)||(23817720-23817783)
chr4 (6-178)||(15841035-15841208)
chr4 (43-109)||(41370673-41370738)
chr4 (72-189)||(23556905-23557022)
chr4 (72-160)||(11348396-11348484)
chr4 (75-178)||(34544107-34544213)
chr4 (139-189)||(11197293-11197343)
chr4 (112-189)||(43827480-43827556)
chr4 (140-178)||(1868119-1868157)
chr4 (126-186)||(2891864-2891924)
chr4 (2-53)||(41707340-41707392)
chr4 (72-120)||(45050601-45050649)
chr4 (139-206)||(922485-922552)
chr4 (139-206)||(10396198-10396265)
chr4 (139-178)||(10396483-10396522)
chr4 (64-95)||(18933103-18933134)
chr4 (127-170)||(45484774-45484817)
chr4 (29-59)||(5882092-5882122)
chr4 (72-113)||(11706636-11706677)
chr4 (135-168)||(29802604-29802637)
chr4 (130-178)||(11706594-11706641)
chr4 (78-150)||(45489792-45489864)
chr4 (138-178)||(51681604-51681644)
[»] scaffold0171 (1 HSPs)
scaffold0171 (25-177)||(17507-17663)
[»] scaffold0391 (4 HSPs)
scaffold0391 (2-177)||(1159-1337)
scaffold0391 (2-123)||(3092-3216)
scaffold0391 (119-189)||(1732-1802)
scaffold0391 (21-66)||(1464-1509)
[»] scaffold0702 (2 HSPs)
scaffold0702 (5-142)||(230-367)
scaffold0702 (74-178)||(566-670)
[»] scaffold0027 (1 HSPs)
scaffold0027 (72-173)||(47360-47461)
[»] scaffold0504 (1 HSPs)
scaffold0504 (74-149)||(10192-10267)
[»] scaffold0113 (2 HSPs)
scaffold0113 (6-104)||(39771-39870)
scaffold0113 (74-178)||(39459-39561)
[»] scaffold0807 (1 HSPs)
scaffold0807 (66-150)||(2869-2953)
[»] scaffold0088 (1 HSPs)
scaffold0088 (110-150)||(10406-10446)


Alignment Details
Target: chr6 (Bit Score: 173; Significance: 4e-93; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 29518849 - 29519037
Alignment:
Q  1 aaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcg 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29518849 aaagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcg 29518948  T
Q  101 gataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  29518949 gataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaagagtgtggtgtctctc 29519037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 189
Target Start/End: Original strand, 2378059 - 2378243
Alignment:
Q  5 taagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggat 103  Q
    |||||||||| |||||| ||||||||| |||||||  ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2378059 taagagcttccgcttgaagggggagcatgatgaataaatggactcacatttg-gggggagtgttggtttgcaagtgtgagttatatgtcccacatcggat 2378157  T
Q  104 aaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| || | ||||||||    
T  2378158 aaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttaggtaagaatgtggtgtctctc 2378243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 2 - 189
Target Start/End: Complemental strand, 10074219 - 10074032
Alignment:
Q  2 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcg 100  Q
    ||||||||||||| |||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||| | |||||| ||||||||||| ||||||||||    
T  10074219 aagtaagagcttccgcttgaagggggagcatgatgaattgatagactcgcacttgagggggagtgttg-tgtgcaagggtgagttatatatcccacatcg 10074121  T
Q  101 gataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||    
T  10074120 gatagaaaagtaaacgttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaaagtgtggtgtctctc 10074032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 3409611 - 3409777
Alignment:
Q  23 ggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaac 122  Q
    |||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||    
T  3409611 ggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtaccacatcagataaaatagtaaaagttgaac 3409710  T
Q  123 accttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    | ||||||||||||||||||||||||||||||||||| |  ||||||||||||||| | ||||||||    
T  3409711 atcttataagtaagaggacccataaacccattgcctttattttttgggtaagagtgtggtgtctctc 3409777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 16107990 - 16108154
Alignment:
Q  1 aaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacat 98  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||| | ||  |||||||||||||||||| ||||||    
T  16107990 aaagtaagagcttccgcttgaaggggagcatgatgaattgatggactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacat 16108089  T
Q  99 cggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    | ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16108090 cagataaaagagtaaatgttgaacaccttataagtaagaggacccataaacccattgccttaagg 16108154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 32 - 189
Target Start/End: Complemental strand, 10074560 - 10074404
Alignment:
Q  32 gatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa 131  Q
    ||||||||||||||||||||||| ||||||||||||| | ||||||||||||||| | ||||||||||||||| || |||||||||||||||||||||||    
T  10074560 gatgaattgatggactcacacttaagggggagtgttg-tgtgcaagtgtgagttagaggtcccacatcggatagaaaagtaaaggttgaacaccttataa 10074462  T
Q  132 gtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  10074461 gtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 10074404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 29518495 - 29518620
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29518495 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaagg 29518594  T
Q  164 ttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||| | ||||||||    
T  29518595 ttttgggtaagagtgtggtgtctctc 29518620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 32741171 - 32741296
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32741171 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaagg 32741270  T
Q  164 ttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||| | ||||||||    
T  32741271 ttttgggtaagagtgtggtgtctctc 32741296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 3409251 - 3409376
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3409251 tgttggtttgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaagg 3409350  T
Q  164 ttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||| | ||||||||    
T  3409351 ttttgggtaagagtgtggtgtctctc 3409376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 27 - 188
Target Start/End: Complemental strand, 2578647 - 2578485
Alignment:
Q  27 agcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 124  Q
    |||| ||||||| ||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  2578647 agcatgatgaatagatggactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccaca-cggataaaagagtaaaggttgaacac 2578549  T
Q  125 cttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 188  Q
     |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||    
T  2578548 tttataagtaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctct 2578485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 64 - 178
Target Start/End: Original strand, 35210196 - 35210310
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35210196 tgttggtttgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaaccattgccttaagg 35210295  T
Q  164 ttttgggtaagagtg 178  Q
    |||||||||||||||    
T  35210296 ttttgggtaagagtg 35210310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 3058218 - 3058343
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  3058218 tgttggtttgcaagtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtatgaggatccataaacccattgccttaagg 3058317  T
Q  164 ttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||| | ||||||||    
T  3058318 ttttgggtaagagtgtggtgtctctc 3058343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 26544041 - 26544166
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||    
T  26544041 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacgttataagtaagaggacccataaacccaccgccttaagg 26544140  T
Q  164 ttttgggtaagagtgcgatgtctctc 189  Q
    ||||| ||||||||| ||||||||||    
T  26544141 ttttgagtaagagtgtgatgtctctc 26544166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 16454838 - 16455013
Alignment:
Q  6 aagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcgga 102  Q
    ||||||||| |||||| ||||||||| | |||||||||||| ||||| |||||||||||||||| | ||  ||| |||||||||| ||||||||||| ||    
T  16454838 aagagcttccgcttgaagggggagcatgctgaattgatggagtcacagttgagggggagtgttgttgtgtacaaatgtgagttatgtgtcccacatcaga 16454937  T
Q  103 taaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  16454938 taaaagagtaaaggttgaacaccttataagtaataggacccataaacctattgccttaaggttttgggtaagagtg 16455013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 63 - 189
Target Start/End: Original strand, 3415449 - 3415575
Alignment:
Q  63 gtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag 162  Q
    |||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3415449 gtgttggtttgcgagtgtgagttatatgtcccacatcacataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccattgccttaag 3415548  T
Q  163 gttttgggtaagagtgcgatgtctctc 189  Q
    ||||| |||||||||| | ||||||||    
T  3415549 gtttttggtaagagtgtggtgtctctc 3415575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 10073843 - 10073657
Alignment:
Q  1 aaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 99  Q
    ||||||||| |||| |||||| |||||| || ||||||||||||||||||||||| || ||| |||||| | ||||||||| ||||||||||||||||||    
T  10073843 aaagtaagaccttccgcttgaagggggaacatgatgaattgatggactcacacttaagagggggtgttg-tgtgcaagtgttagttatatgtcccacatc 10073745  T
Q  100 ggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||| ||||  ||||||||||||||||||||||||||||||| |||||||| ||||| |||||| ||||||||||||||| | ||||||||    
T  10073744 ggagaaaa--gtaaaggttgaacaccttataagtaagaggatccataaactcattggcttaagattttgggtaagagtgtggtgtctctc 10073657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 64 - 178
Target Start/End: Complemental strand, 14748504 - 14748390
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||    
T  14748504 tgttgatttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacccataaactcattgcgttaagg 14748405  T
Q  164 ttttgggtaagagtg 178  Q
    |||||||||||||||    
T  14748404 ttttgggtaagagtg 14748390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 2377756 - 2377860
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2377756 caagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 2377855  T
Q  174 gagtg 178  Q
    |||||    
T  2377856 gagtg 2377860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 64 - 178
Target Start/End: Original strand, 1127352 - 1127466
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  1127352 tgttggtttgcaactgtgagttatatatcccacatcgggtaaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattaccttaagg 1127451  T
Q  164 ttttgggtaagagtg 178  Q
    |||||||||||||||    
T  1127452 ttttgggtaagagtg 1127466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 2579721 - 2579549
Alignment:
Q  1 aaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 99  Q
    |||||||||||||  |||||| |||||| || ||||||| || ||||||||||||||||| |||||||| || ||| |||||||||||||||||||||||    
T  2579721 aaagtaagagctttcgcttgaagggggaccatgatgaatagacggactcacacttgagggagagtgttg-ttagcaggtgtgagttatatgtcccacatc 2579623  T
Q  100 ggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||| |||| ||||||||| | | ||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  2579622 ggacaaaaaagtaaaggtcggataccttataagtaagagggcccataaactcattgccttaaggttttgggtaa 2579549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 77 - 178
Target Start/End: Complemental strand, 32460733 - 32460632
Alignment:
Q  77 gtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagag 176  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32460733 gtgtgagttatatgtcccacatcgtataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagag 32460634  T
Q  177 tg 178  Q
    ||    
T  32460633 tg 32460632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 2580030 - 2579913
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||    
T  2580030 tgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacattataagtaagaggacccataaacccacagccttaaggttttgggt 2579931  T
Q  172 aagagtgcgatgtctctc 189  Q
    |||| || | ||||||||    
T  2579930 aagaatgtggtgtctctc 2579913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 65 - 188
Target Start/End: Original strand, 1846741 - 1846864
Alignment:
Q  65 gttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggt 164  Q
    ||||| |||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  1846741 gttgggttgcaagtgtgaattctatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagcacccataaatccattgccttaaggt 1846840  T
Q  165 tttgggtaagagtgcgatgtctct 188  Q
    ||||| |||||||| | |||||||    
T  1846841 tttggataagagtgtggtgtctct 1846864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 16107680 - 16107795
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||||||||||||||  |||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16107680 caagtgtgagttatatgtgtcacatcggataaaaaagtaaaggttaaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaa 16107779  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| | ||||||||    
T  16107780 gagtgtggtgtctctc 16107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 593867 - 593761
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  593867 tgcaagtgtgagttgtatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaaccgactgccttaaggttttgggt 593768  T
Q  172 aagagtg 178  Q
    || ||||    
T  593767 aatagtg 593761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 1950340 - 1950226
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaag 174  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| | | ||||||||||||||| |||||    
T  1950340 aagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttacaagtaagaggagccataaatctaatgccttaaggttttgagtaag 1950241  T
Q  175 agtgcgatgtctctc 189  Q
    |||| || |||||||    
T  1950240 agtgtgacgtctctc 1950226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 188
Target Start/End: Complemental strand, 2579016 - 2578877
Alignment:
Q  47 tcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccata 146  Q
    |||||||||||||||||||||| |  |||||||||| ||||||||||| |||||||||||| |||||| |||||| ||||||||| |||||||| |||||    
T  2579016 tcacacttgagggggagtgttg-tgagcaagtgtgatttatatgtccctcatcggataaaa-agtaaatgttgaataccttataaataagaggatccata 2578919  T
Q  147 aacccattgccttaaggttttgggtaagagtgcgatgtctct 188  Q
    ||| |||| ||||||||||||||||||||||| | |||||||    
T  2578918 aactcattaccttaaggttttgggtaagagtgtggtgtctct 2578877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 16454577 - 16454681
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||||||||| ||||||||||| ||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  16454577 caagtgtgagttatgtgtcccacatcagataaaagaataaaagttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataa 16454676  T
Q  174 gagtg 178  Q
    |||||    
T  16454677 gagtg 16454681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 189
Target Start/End: Complemental strand, 2579305 - 2579150
Alignment:
Q  32 gatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttat 129  Q
    ||||||| ||||||||||||||||||||||||||||| | ||  ||||||| |||||||||||||||||||||||||| |||||| |||||||||||||     
T  2579305 gatgaatagatggactcacacttgagggggagtgttgttgtgtacaagtgttagttatatgtcccacatcggataaaagagtaaaagttgaacacctta- 2579207  T
Q  130 aagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
       |||||||| ||||||||||||  | |||||| ||||| |||||||| | ||||||||    
T  2579206 ---taagaggaaccataaacccataactttaaggctttggctaagagtgtggtgtctctc 2579150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 10911565 - 10911683
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaata-gtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttggg 170  Q
    |||||||||||||||||||||| ||||| ||||||| | |||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||      
T  10911565 tgcaagtgtgagttatatgtcctacatcagataaaaaaagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaaagttttgaa 10911664  T
Q  171 taagagtgcgatgtctctc 189  Q
    |||||||| ||||||||||    
T  10911665 taagagtgtgatgtctctc 10911683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 178
Target Start/End: Original strand, 2843560 - 2843661
Alignment:
Q  78 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagagga-cccataaacccattgccttaaggttttgggtaagag 176  Q
    ||||||||||||||  |||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  2843560 tgtgagttatatgtttcacatcggataaaataataaaagttgaacaccttataagtaagaggaccccataaactcattgccttaaggttttgggtaagag 2843659  T
Q  177 tg 178  Q
    ||    
T  2843660 tg 2843661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 78 - 178
Target Start/End: Complemental strand, 9062501 - 9062402
Alignment:
Q  78 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||| ||||| ||||||||||| |||    
T  9062501 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggactcataaactcattgtcttaa-gttttgggtaaaagt 9062403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 75 - 178
Target Start/End: Complemental strand, 6999951 - 6999848
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaag 174  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||| ||||||||| |||||||| || |||||||||||||||| ||||    
T  6999951 aagtgtgagttatatgtcctacatcggataaaaaagtaaaagttgaacaccttatatgtaagaggatccataaactcactgccttaaggttttggataag 6999852  T
Q  175 agtg 178  Q
    ||||    
T  6999851 agtg 6999848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 189
Target Start/End: Original strand, 8481888 - 8482043
Alignment:
Q  34 tgaattgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa 131  Q
    ||||||||||||||||||||||||||||||  ||||| | |||||||||||||||||||||| ||||| |||| || |||  ||||||||||| ||||||    
T  8481888 tgaattgatggactcacacttgagggggagattgttg-tgtgcaagtgtgagttatatgtcc-acatcagatataaaagtggaggttgaacactttataa 8481985  T
Q  132 gtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
     | ||| ||| ||||||| |||||||||||| ||||||||||||||| | ||||||||    
T  8481986 atgagatgactcataaactcattgccttaagattttgggtaagagtgtggtgtctctc 8482043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 6071064 - 6071238
Alignment:
Q  6 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccacatcgga 102  Q
    ||||||||| | || ||||| ||||| |||||||||||||||||||| |||||||| ||  ||||| | ||||||||||||||||||||||||||| | |    
T  6071064 aagagcttccgtttaaggggtgagcatgatgaattgatggactcacatttgaggggaagattgttg-tgtgcaagtgtgagttatatgtcccacattgaa 6071162  T
Q  103 taaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    || || |||  ||||||||||| |||||||| ||| || |||||||| |||||||||||| |||||| ||||||||    
T  6071163 tagaaaagtggaggttgaacactttataagtgagatgatccataaactcattgccttaagattttggataagagtg 6071238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 5832182 - 5832068
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||   ||||||| ||||||||||    
T  5832182 caagtgtaagttatatgtcccacattggataaaagagtaaaggttgaacaccttataagtaagaggacccataaagcca-ccccttaagattttgggtaa 5832084  T
Q  174 gagtgcgatgtctctc 189  Q
     |||| | ||||||||    
T  5832083 aagtgtggtgtctctc 5832068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 67 - 189
Target Start/End: Complemental strand, 5958766 - 5958644
Alignment:
Q  67 tggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttt 166  Q
    |||| ||||| ||||||||||||||   ||||||||||||| ||||||||||||||||||||||| |||||| || ||||||| ||||| ||||| ||||    
T  5958766 tggtgtgcaattgtgagttatatgtgttacatcggataaaacagtaaaggttgaacaccttataaataagagaactcataaactcattgtcttaaagttt 5958667  T
Q  167 tgggtaagagtgcgatgtctctc 189  Q
    ||||  |||||| ||||||||||    
T  5958666 tgggatagagtgtgatgtctctc 5958644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 145
Target Start/End: Original strand, 35210449 - 35210551
Alignment:
Q  32 gatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa 131  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||| ||||| |||    
T  35210449 gatggattgatggactcacacttgagggggagtgttggtttgcaagtgc-----------cccacatcggataaaatagtaaaggttgaataccttgtaa 35210537  T
Q  132 gtaagaggacccat 145  Q
    ||||||||||||||    
T  35210538 gtaagaggacccat 35210551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 188
Target Start/End: Original strand, 2975482 - 2975668
Alignment:
Q  2 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg-gtttgcaagtgtgagttat-atgtcccacat 98  Q
    ||||||||||||| |||| | |||||| || ||||||| |||| ||||||||||| |||||||||||| ||||  |||||| ||| || |||||||||||    
T  2975482 aagtaagagcttccgcttaaagggggaacatgatgaatagatgcactcacacttg-gggggagtgttgtgttt--aagtgtaagtaattatgtcccacat 2975578  T
Q  99 cggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 188  Q
    |  ||| || |||||| ||||||||||||||||| |||| |||||||||| || ||| ||||| ||||||  |||||||| |||||||||    
T  2975579 caaatagaaaagtaaatgttgaacaccttataagcaagatgacccataaatcctttgtcttaaagttttgaataagagtgtgatgtctct 2975668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 12092640 - 12092523
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||| ||| |||| ||||||||||||||||| || |||  ||||||| ||| |||||||| |||||| |||||||| |||||||||||||||||| ||    
T  12092640 tgcaagggtgtgttagatgtcccacatcggatagaaaagtggaggttgagcactttataagtgagaggatccataaactcattgccttaaggttttgagt 12092541  T
Q  172 aagagtgcgatgtctctc 189  Q
    |||| || | ||||||||    
T  12092540 aagactgtggtgtctctc 12092523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 33605906 - 33606034
Alignment:
Q  2 aagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgg 101  Q
    ||||||||||||| ||| || |  | ||||| |||||||||||||||||||||||||||||||| | || ||||| ||| |||||||||||||||||||     
T  33605906 aagtaagagcttccgctcgaagaagggcacggtgaattgatggactcacacttgagggggagtgat-gtgtgcaaatgtaagttatatgtcccacatcga 33606004  T
Q  102 ataaaatagtaaaggttgaacaccttataa 131  Q
    ||| || |||  ||||||||||| ||||||    
T  33606005 atagaaaagtggaggttgaacactttataa 33606034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 12085191 - 12085086
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||||  |||| |||| || |||  || |||||||| ||||||   | ||||| |||||| |||| |||||||||||||||||    
T  12085191 tgcaagtgtgagttatatgtcctgcatcagatagaa-agtggagtttgaacactttataatagaaaggactcataaaaccatggccttaaggttttgggt 12085093  T
Q  172 aagagtg 178  Q
    |||||||    
T  12085092 aagagtg 12085086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 14789325 - 14789279
Alignment:
Q  109 agtaaaggttgaacaccttataagtaagaggacccataaacccattg 155  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  14789325 agtaaaggttgaacaccttacaagtaagaggacccataaaccaattg 14789279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 155
Target Start/End: Complemental strand, 17135223 - 17135144
Alignment:
Q  76 agtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattg 155  Q
    ||||||||||||||||| ||||||||||| |  |||||| ||| || |||||||||| |||||||  ||||||| |||||    
T  17135223 agtgtgagttatatgtctcacatcggatagagaagtaaatgtttaataccttataagcaagaggattcataaactcattg 17135144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 175
Target Start/End: Complemental strand, 22605345 - 22605310
Alignment:
Q  140 acccataaacccattgccttaaggttttgggtaaga 175  Q
    ||||||||||||||||||||||||||||||||||||    
T  22605345 acccataaacccattgccttaaggttttgggtaaga 22605310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 12071849 - 12071743
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||| | |||| |||| || | |  || |||||||| ||||||   | ||||| |||||||| ||  ||||||||||||||||    
T  12071849 tgcaagtgtgagttatatgtctcgcatcagatagaaaaatggagtttgaacactttataatagaaaggactcataaacctatgaccttaaggttttgggt 12071750  T
Q  172 aagagtg 178  Q
    |||||||    
T  12071749 aagagtg 12071743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 12092261 - 12092201
Alignment:
Q  6 aagagcttctgcttgaggggg---agcacgatgaattgatggactcacacttgagggggag 63  Q
    ||||||||| ||| |||||||   |||| ||||||||||||||||||||||||||||||||    
T  12092261 aagagcttccgctagaggggggtgagcatgatgaattgatggactcacacttgagggggag 12092201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 178
Target Start/End: Original strand, 31714671 - 31714775
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||| | |||||||| |||||||||| || |||  |||||||||    ||||| | ||||||||||| ||| |||||||||||||||||| ||    
T  31714671 tgcaagtgtgact-atatgtcctacatcggatagaaaagtggaggttgaacgttatataa-tgagaggacccattaactcattgccttaaggttttgagt 31714768  T
Q  172 aagagtg 178  Q
    |||||||    
T  31714769 aagagtg 31714775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 21130147 - 21130109
Alignment:
Q  140 acccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  21130147 acccataaatccattgccttaaggttttggataagagtg 21130109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 11637811 - 11637762
Alignment:
Q  140 acccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||||||||||| |||||| |||||| |||||||| | ||||||||    
T  11637811 acccataaacccattgtcttaagattttggataagagtgtggtgtctctc 11637762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 156; Significance: 5e-83; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 7553952 - 7554142
Alignment:
Q  1 aaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacat 98  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||    
T  7553952 aaagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacat 7554051  T
Q  99 cggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||||||||    
T  7554052 cggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccatagccttaaggttttgggtaagagtgtggtgtctctc 7554142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 14681437 - 14681628
Alignment:
Q  1 aaagtaagagcttctgcttga--gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacat 98  Q
    |||||||||||||| ||||||  ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14681437 aaagtaagagcttccgcttgaaggggggagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtaagttatatgtcccacat 14681536  T
Q  99 cggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctca 190  Q
    | ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||| | |||||||||    
T  14681537 cagataaaatagtaaaggttgaacaccttgtaagtaagagggcccataaacccattgtcttaaggttttgggtaagagtgtggtgtctctca 14681628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 39 - 173
Target Start/End: Complemental strand, 37533201 - 37533067
Alignment:
Q  39 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 138  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37533201 tgatggactcacgcttgagggggagtgttggtttgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagag 37533102  T
Q  139 gacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||||||| |||||||||||||||||||||||    
T  37533101 gacccataaactcattgccttaaggttttgggtaa 37533067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 22 - 178
Target Start/End: Complemental strand, 22566872 - 22566714
Alignment:
Q  22 gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttg 119  Q
    ||||||||||||| || |||| |||| ||| ||||||||||||||||  || ||||||||||||| |||||||||||||||||||||| |||||||||||    
T  22566872 gggggagcacgataaagtgatagactaacatttgagggggagtgttgttgtatgcaagtgtgagtaatatgtcccacatcggataaaagagtaaaggttg 22566773  T
Q  120 aacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22566772 aacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 22566714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 24 - 189
Target Start/End: Original strand, 30244220 - 30244387
Alignment:
Q  24 gggagcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 121  Q
    ||||||| ||||| | |||| |||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||| |||||||||||||    
T  30244220 gggagcatgatgactagatgaactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaa 30244319  T
Q  122 caccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||    
T  30244320 gaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtggtgtctctc 30244387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 30245024 - 30245194
Alignment:
Q  21 agggggagcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggtt 118  Q
    |||||||||| ||||| | ||||||||| ||||||||||||||||||| | ||  |||||||||||||||||| ||||||||||||||| ||||||||||    
T  30245024 agggggagcatgatgattagatggactcgcacttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggtt 30245123  T
Q  119 gaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  30245124 gaacaccttataagtaagacgacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 30245194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 9 - 189
Target Start/End: Original strand, 45434572 - 45434753
Alignment:
Q  9 agcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaa 107  Q
    |||||| |||||| ||||||||| |||||||||| ||||||||||||| ||||| ||  | || | ||||||| ||||||||||||||||||||||||||    
T  45434572 agcttccgcttgaagggggagcatgatgaattgaaggactcacacttgggggggtgttgttgtgtacaagtgtaagttatatgtcccacatcggataaaa 45434671  T
Q  108 tagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
     |||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||| ||||||||||    
T  45434672 aagtaaaggttgaacaccttataagtaagaggacccataaacttactgccttaaggttttgggtaagagtgtgatgtctctc 45434753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 29157559 - 29157682
Alignment:
Q  66 ttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggtt 165  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  29157559 ttggtttgcaagtgtgagttatatgtcccacaccggataaaatagtaaaggttgaacaccttataagtaagacgacccataaatccattgccttaaggtt 29157658  T
Q  166 ttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||| | ||||||||    
T  29157659 ttgggtaagagtgtggtgtctctc 29157682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 1085774 - 1085668
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1085774 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttttgggt 1085675  T
Q  172 aagagtg 178  Q
    |||||||    
T  1085674 aagagtg 1085668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 72 - 178
Target Start/End: Original strand, 7517580 - 7517686
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7517580 tgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 7517679  T
Q  172 aagagtg 178  Q
    |||||||    
T  7517680 aagagtg 7517686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 23535 - 23418
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23535 tgcaattgtgagttatatgttccacatcggatacaatagtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaaggttttgggt 23436  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  23435 aagagtgtggtgtctctc 23418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 16569196 - 16569313
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16569196 tgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggtttttggt 16569295  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||||| ||||||||    
T  16569296 aagagtgcggtgtctctc 16569313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 16596466 - 16596349
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16596466 tgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggtttttggt 16596367  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||||| ||||||||    
T  16596366 aagagtgcggtgtctctc 16596349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 6054562 - 6054677
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6054562 caagtgttagttatatgtctcacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaacacattgccttaaggttttgggtaa 6054661  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| | ||||||||    
T  6054662 gagtgtggtgtctctc 6054677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 79 - 189
Target Start/End: Original strand, 11845198 - 11845308
Alignment:
Q  79 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  11845198 gtgagttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttggataagagtg 11845297  T
Q  179 cgatgtctctc 189  Q
     | ||||||||    
T  11845298 tggtgtctctc 11845308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 64 - 188
Target Start/End: Complemental strand, 37533530 - 37533406
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    ||||| |||| ||||||||||||||||| | |||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37533530 tgttgatttgtaagtgtgagttatatgttctacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaagg 37533431  T
Q  164 ttttgggtaagagtgcgatgtctct 188  Q
    ||||||||||||||| | |||||||    
T  37533430 ttttgggtaagagtgtggtgtctct 37533406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 36939891 - 36939785
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36939891 tgcaagtgtgagttatatgtcccaaatcgtataaaatagtaaaagttgaacaccttataagtaagaggacccataaatccattgccttaaggttttgggt 36939792  T
Q  172 aagagtg 178  Q
    || ||||    
T  36939791 aaaagtg 36939785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 22567196 - 22567080
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  22567196 tgcaagtgtgagtaatatgtcc-acatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggtttttggt 22567098  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  22567097 aagagtgtggtgtctctc 22567080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 178
Target Start/End: Complemental strand, 1085482 - 1085300
Alignment:
Q  2 aagtaagagcttctgcttgaggggg-agcacgatgaattgatggac--tcacacttgagggggagtgttg--gtttgcaagtgtgagttat-atgtccca 95  Q
    |||||||||||||  ||||| |||| |||| ||||||  |||||||  |||||||||| |||||||||||  || |||||||||||||| | ||||||||    
T  1085482 aagtaagagcttccccttgaaggggtagcatgatgaaaagatggacactcacacttgaaggggagtgttgttgtgtgcaagtgtgagtttttatgtccca 1085383  T
Q  96 catcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
     |||||||||||||||||| |||||||| || ||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  1085382 tatcggataaaatagtaaaagttgaacaactcataagtaagagaacccataaactcattgccttaaggttttgggtaagagtg 1085300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 30244628 - 30244771
Alignment:
Q  2 aagtaagagcttctgcttgagggggagcacgatgaatt-gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacat 98  Q
    ||||||||||||| |||| | |||||||| ||||||   |||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||    
T  30244628 aagtaagagcttccgcttcaaggggagcatgatgaaaaagatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacat 30244727  T
Q  99 cggataaaatagtaaaggttgaacaccttataagtaagaggacc 142  Q
     |||||||| ||||||||||||||||||||||| ||||||||||    
T  30244728 tggataaaagagtaaaggttgaacaccttataaataagaggacc 30244771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 30245421 - 30245567
Alignment:
Q  2 aagtaagagcttctgcttgagggggagcacgatgaatt-gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacat 98  Q
    ||||||||||||| ||||||||||||||| ||||||   || |||| ||||||||||||||| |||||  || |||||||||||||||||||||||||||    
T  30245421 aagtaagagcttccgcttgagggggagcatgatgaaaaagacggacacacacttgagggggactgttgttgtgtgcaagtgtgagttatatgtcccacat 30245520  T
Q  99 cggataaaatagtaaaggttgaacaccttataagtaagaggacccat 145  Q
    | ||||||| ||||||||||||||||||||||||||||||| |||||    
T  30245521 cagataaaagagtaaaggttgaacaccttataagtaagagggcccat 30245567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 45754718 - 45754832
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  45754718 caagtgtgagttatatgtcc-acatcggataaaatagtaaatgttgaacaccttataagtaagatgactcataaacccatagccttaaggttttgggtaa 45754816  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| | ||||||||    
T  45754817 gagtgtggtgtctctc 45754832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 47129097 - 47129212
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| || |||||||||||||||     
T  47129097 caagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacctcttataagtaagaggacccataaacccatcgctttaaggttttgggtag 47129196  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| | ||||||||    
T  47129197 gagtgtggtgtctctc 47129212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 80 - 178
Target Start/End: Original strand, 19122740 - 19122837
Alignment:
Q  80 tgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  19122740 tgagttatatgtcc-acatcggataaaatagtaaaggttgaacaccttataagtaagaggactcataaatccattgccttaaggttttgggtaagagtg 19122837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 178
Target Start/End: Original strand, 24177435 - 24177541
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||| |||    
T  24177435 tgcaagtatgagttatatgtcccacatcggataaaagagtaaaggctgaacaccttataagtaagcggacccataaacccattgccttaaagtttttggt 24177534  T
Q  172 aagagtg 178  Q
    |||||||    
T  24177535 aagagtg 24177541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 40094932 - 40094826
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||| ||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  40094932 tgcaagtgtgagttatatgtctcacatcgaataaaagagtaaaggttcaacaccttataagtaagaggacccataaacccatcgtcttaaggttttgggt 40094833  T
Q  172 aagagtg 178  Q
    |||||||    
T  40094832 aagagtg 40094826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 34218186 - 34218075
Alignment:
Q  78 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 177  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  34218186 tgtgagttatatgtctcacatcggataaaaaagtaaatgttgaacaccttataagtgagaggactcataaacccattgtcttaaggttttgggtaagagt 34218087  T
Q  178 gcgatgtctctc 189  Q
    | | ||||||||    
T  34218086 gtggtgtctctc 34218075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 45433243 - 45433358
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||| || |||||||| ||||||||||| ||||||||||    
T  45433243 caagtgtgagttatatgatccacatcggataaaagagtaaaggttgaacaccttataagtaagagaactcataaacctattgccttaagattttgggtaa 45433342  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| | ||||||||    
T  45433343 gagtgtggtgtctctc 45433358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 43 - 145
Target Start/End: Original strand, 30255308 - 30255412
Alignment:
Q  43 ggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagagga 140  Q
    ||||||||||||||||||||||||||  || |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  30255308 ggactcacacttgagggggagtgttgttgtgtgcaagtgtgcgttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggg 30255407  T
Q  141 cccat 145  Q
    |||||    
T  30255408 cccat 30255412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 177
Target Start/End: Original strand, 36622960 - 36623065
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  36622960 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacattttataagtaggaggatccataaatccattgccttaaggttttgggt 36623059  T
Q  172 aagagt 177  Q
    | ||||    
T  36623060 aggagt 36623065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 118459 - 118353
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||| |||||||||||||||||| |||| || |||||||||||||||||| ||||||||||||| ||||||||||||| || |||||||||||||    
T  118459 tgcaagtgtaagttatatgtcccacatcagatagaaaagtaaaggttgaacacctaataagtaagaggatccataaacccattaccgtaaggttttgggt 118360  T
Q  172 aagagtg 178  Q
    |||||||    
T  118359 aagagtg 118353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 8128599 - 8128493
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||||| |||||||| || | |||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||| |    
T  8128599 tgcaagtgtgagttatatgtcccatatcggatagaaaaataaaggttgaacaccttatatgtaagaggacccataaacccataaccttaaggttttggtt 8128500  T
Q  172 aagagtg 178  Q
    |||||||    
T  8128499 aagagtg 8128493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 40230449 - 40230348
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||| ||||||||||||||||||| |||||| |||||| |||||||| ||||||||||||||||||||||||||||| | |||||||||||||||    
T  40230449 tgcaagtgtaagttatatgtcccacatcgaataaaaaagtaaaagttgaacatcttataagtaagaggacccataaacccatagtcttaaggttttgggt 40230350  T
Q  172 aa 173  Q
    ||    
T  40230349 aa 40230348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 24838857 - 24838742
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaag-aggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| |||| |||||||||| ||| |||||||||||||||||    
T  24838857 aagtgtaagttatatgtctcacatcgaataaaagagtaaaggttgaacaccttataagtaagaaggatccataaacccgttgtcttaaggttttgggtaa 24838758  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| || |||||||    
T  24838757 gagtgtgacgtctctc 24838742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 36534942 - 36534836
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||| | ||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||| |  | |||||||||||||||    
T  36534942 tgcaagtgtaacttatatgtcccacctcggataaaacagtagaggttgaacaccttataagtaagaggacccataaacctaaagtcttaaggttttgggt 36534843  T
Q  172 aagagtg 178  Q
    |||||||    
T  36534842 aagagtg 36534836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 77 - 178
Target Start/End: Original strand, 30032572 - 30032673
Alignment:
Q  77 gtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagag 176  Q
    |||||||||||||||||||||||| |||||| |||||  ||||||||||||||||||||||| | ||||||||| || ||||||||||||||||||||||    
T  30032572 gtgtgagttatatgtcccacatcgaataaaagagtaagtgttgaacaccttataagtaagagtatccataaacctatagccttaaggttttgggtaagag 30032671  T
Q  177 tg 178  Q
    ||    
T  30032672 tg 30032673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 43241495 - 43241612
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| ||||| |||||||  |||| ||||||||||| |||    
T  43241495 tgcaagtgtgagttatatgttccacatcggataaaaaaataaaggttgaacaccttataagtaaaaggactcataaacttattgacttaaggttttaggt 43241594  T
Q  172 aagagtgcgatgtctctc 189  Q
    || |||  ||||||||||    
T  43241595 aaaagtatgatgtctctc 43241612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 72 - 160
Target Start/End: Complemental strand, 28301701 - 28301613
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgcctta 160  Q
    ||||||||||||||||||||| ||||||||||| || |||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  28301701 tgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaagctgaacaccttataagtaagaggacccataaacccattgcctta 28301613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 40094621 - 40094502
Alignment:
Q  2 aagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgg 101  Q
    ||||||||||||| ||||||||| ||||  ||||||| ||||||||||||||| ||| ||||||||| | |||||||||||||||||||||| ||||| |    
T  40094621 aagtaagagcttccgcttgagggagagcgtgatgaatagatggactcacactttaggaggagtgttg-tgtgcaagtgtgagttatatgtccaacatcag 40094523  T
Q  102 ataaaatagtaaaggttgaac 122  Q
    |||||| ||||||||||||||    
T  40094522 ataaaagagtaaaggttgaac 40094502  T

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Target: chr7; HSP #40
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 41910749 - 41910657
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggtttt 167  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||| |||||| ||||    
T  41910749 aagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaataccttataactgagaggacccataaacccattggcttaagatttt 41910657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 9901648 - 9901760
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaag 174  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||| ||| ||||| |||||||| ||||| ||||||||||||||||||    
T  9901648 aagtgtgagttatatgtcc-acatcggataaaacagtaaaggttgaacatcttatacgta-gaggatccataaactcattgtcttaaggttttgggtaag 9901745  T
Q  175 agtgcgatgtctctc 189  Q
    |||| | ||||||||    
T  9901746 agtgtggtgtctctc 9901760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 189
Target Start/End: Original strand, 37345846 - 37346035
Alignment:
Q  2 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatat--gtcccacat 98  Q
    |||||| ||||||  ||||| |||||||||||||||||||||| |||||||||||| ||||||||||| | ||||||||||||||||||  |||  | ||    
T  37345846 aagtaaaagcttccacttgacgggggagcacgatgaattgatgaactcacacttgaaggggagtgttg-tgtgcaagtgtgagttatatatgtcatatat 37345944  T
Q  99 cggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    | |||| || |||  ||||| ||||  |||||||| ||| |||||||||||  |||||||||| |||||| ||||||||| || |||||||    
T  37345945 ctgatagaaaagtggaggttaaacattttataagtgagaagacccataaacatattgccttaaagttttgagtaagagtgtgacgtctctc 37346035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 75 - 176
Target Start/End: Original strand, 20599317 - 20599418
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaag 174  Q
    ||||||||||||||||||||| ||||||||||| |||||||| | ||||| |||||| |||||||||  |||||| ||||||||||| ||||||||||||    
T  20599317 aagtgtgagttatatgtcccatatcggataaaaaagtaaaggataaacactttataaataagaggacatataaactcattgccttaacgttttgggtaag 20599416  T
Q  175 ag 176  Q
    ||    
T  20599417 ag 20599418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 23569091 - 23569026
Alignment:
Q  141 cccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggtcctaga 206  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23569091 cccataaacccattgccttaaggttttgggtaagagtgtgatgtctctcatttagtgggtcctaga 23569026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 178
Target Start/End: Original strand, 41854635 - 41854740
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||| |||||||||||||||||||| | ||||| |||||||||||||||||||||||| |||| |||| |||||   | ||||||||||||||||||    
T  41854635 tgcaagtatgagttatatgtcccacatcag-taaaagagtaaaggttgaacaccttataagcaagatgacctataaatataatgccttaaggttttgggt 41854733  T
Q  172 aagagtg 178  Q
    |||||||    
T  41854734 aagagtg 41854740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 36109075 - 36109007
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagagga 140  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  36109075 tgcaagtgtgagttatatttctcacatcggataaaagagtaaaggttgaacaccttataagtaagagga 36109007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 189
Target Start/End: Original strand, 30253534 - 30253609
Alignment:
Q  114 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  30253534 aggttgaagaccttataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 30253609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 44361616 - 44361517
Alignment:
Q  77 gtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagag 176  Q
    ||||||| |||||||| |||||||||||||| |||||| |||||||||||| ||||||||| || ||||||||||||  ||||| |||||| ||||||||    
T  44361616 gtgtgagatatatgtctcacatcggataaaagagtaaaagttgaacacctt-taagtaagatgatccataaacccataaccttacggttttaggtaagag 44361518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 21416232 - 21416162
Alignment:
Q  139 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggtcctagatgt 209  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||||||||  |||| |||||||||||||    
T  21416232 gacccataaacccattgccttagggttttgggtaagagtgtggtgtctctctcttagcgggtcctagatgt 21416162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 28300366 - 28300305
Alignment:
Q  118 tgaacaccttataagtaagaggaccc-ataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  28300366 tgaacaccttataagtaagagaaccccataaacccattgccttaagattttgggtaagagtg 28300305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 45697841 - 45697929
Alignment:
Q  2 aagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgt 91  Q
    ||||||||||||| |||||| |||||||| ||||||| |||  |||||||||||||| |||||||| || ||||||||| | ||||||||    
T  45697841 aagtaagagcttccgcttgaaggggagcatgatgaatagataaactcacacttgaggaggagtgtt-gtgtgcaagtgtcatttatatgt 45697929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 189
Target Start/End: Complemental strand, 4124293 - 4124129
Alignment:
Q  26 gagcacgatgaattgatggactcacacttgagggggagtgt-tggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 124  Q
    ||||| ||||||||||||| ||||||||||| | | ||| | | || ||||| ||||| ||| |||||| ||||||| || || | |  |||||  ||||    
T  4124293 gagcatgatgaattgatgggctcacacttgatgtgaagtttgttgtgtgcaactgtgaattacatgtcctacatcggttagaaaatttgaggtttgacac 4124194  T
Q  125 cttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
     |||||||| |||||||| |||||| |||||| |||||||||||| ||| |||| | ||||||||    
T  4124193 tttataagtgagaggaccaataaactcattgcattaaggttttggataaaagtgtggtgtctctc 4124129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 14681281 - 14681324
Alignment:
Q  66 ttggtttgcaagtgtgagttatatgtcccacatcggataaaata 109  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  14681281 ttggtttgcaagtgtgagttatatgtcccacattggataaaata 14681324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 48243288 - 48243241
Alignment:
Q  21 agggggagcacgatgaattgatggactcacacttgagggggagtgttg 68  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  48243288 agggggagcatgatgaattgatggattcacacttgagggggagtgttg 48243241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 189
Target Start/End: Original strand, 37167808 - 37167898
Alignment:
Q  93 ccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||| |||||||||||||| ||||||||       |||||||||| ||||||| |||||| ||||| |||||||||||||||| | ||||||||    
T  37167808 ccacatcagataaaatagtaaatgttgaacag------agtaagaggatccataaatccattgacttaaagttttgggtaagagtgtggtgtctctc 37167898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 10342192 - 10342271
Alignment:
Q  6 aagagcttctgcttgaggggg-agcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagtt 85  Q
    |||||||||  |||||||||| |||| |||||||||  ||||||| ||||||||||||||| |||| ||||||||||||||    
T  10342192 aagagcttccacttgagggggcagcatgatgaattggcggactcatacttgagggggagtg-tggtgtgcaagtgtgagtt 10342271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 36967385 - 36967335
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 124  Q
    ||||||||||||||||||| |||||||||||||| ||||||| || |||||    
T  36967385 caagtgtgagttatatgtctcacatcggataaaaaagtaaagattaaacac 36967335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 21619136 - 21619097
Alignment:
Q  139 gacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  21619136 gacccataaacccattgtcttaaggttttgggtaaaagtg 21619097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 28300405 - 28300365
Alignment:
Q  25 ggagcacgatgaattgatggactcacacttgagggggagtg 65  Q
    |||||| ||||||| |||||||||||||||||| |||||||    
T  28300405 ggagcatgatgaatagatggactcacacttgagagggagtg 28300365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 47129450 - 47129486
Alignment:
Q  153 ttgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||||||||||||||||||||| | ||||||||    
T  47129450 ttgccttaaggttttgggtaagagtgtggtgtctctc 47129486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 150; Significance: 2e-79; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 22304497 - 22304686
Alignment:
Q  1 aaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 99  Q
    |||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22304497 aaagtaagagcttccgcttgaagggggagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtgagctatatgtcccacatc 22304596  T
Q  100 ggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  22304597 ggataaaatagtaaaggttgaataccttataagtaagaggacccataaacacattgccttaaggttttgggtaagagtgtggtgtctctc 22304686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 37990869 - 37990680
Alignment:
Q  1 aaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacat 98  Q
    ||||||| |||||| ||||||||||| ||| |||||||||||||||||||| |||||||||||||||| | ||  |||||||||||||||||| ||||||    
T  37990869 aaagtaaaagcttccgcttgaggggg-gcatgatgaattgatggactcacagttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacat 37990771  T
Q  99 cggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  37990770 cggataaaatagtaaatgttgaacaccttataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 37990680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 6 - 189
Target Start/End: Complemental strand, 54018042 - 54017857
Alignment:
Q  6 aagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggat 103  Q
    ||||||||| |||||||||||| || ||||||  ||||||||||||||||||||||||| |||  || |||||||||||||||||||||| |||||||||    
T  54018042 aagagcttccgcttgagggggaacatgatgaaaagatggactcacacttgagggggagtattgttgtgtgcaagtgtgagttatatgtcctacatcggat 54017943  T
Q  104 aaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||| |  |||||||||||||||||||||||| | ||||||||    
T  54017942 aaaagagtaaaggttgaacaccttataagtaagaggactcataaacctaacgccttaaggttttgggtaagagtgtggtgtctctc 54017857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 23 - 178
Target Start/End: Original strand, 4823606 - 4823761
Alignment:
Q  23 ggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaac 122  Q
    |||||||||| | || |||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||| |||    
T  4823606 ggggagcacgttaaagtgatggactcacacttgaaggggagtgttggtttgcaagtgtgagttataagtctcacatcggataaaatagtaaaagttaaac 4823705  T
Q  123 accttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  4823706 accttataagtaggaggacccataaactcattgccttaagattttgggtaagagtg 4823761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 22 - 188
Target Start/End: Original strand, 15773140 - 15773308
Alignment:
Q  22 gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttg 119  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||| |||||| |||||| ||||    
T  15773140 gggggagcacgataaagtgatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaaagttg 15773239  T
Q  120 aacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 188  Q
    |||| ||||||||||||||||| ||||| | ||||||||||| |||||||||||||||| |||||||||    
T  15773240 aacatcttataagtaagaggactcataagctcattgccttaaagttttgggtaagagtgtgatgtctct 15773308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 18 - 178
Target Start/End: Complemental strand, 21832554 - 21832395
Alignment:
Q  18 ttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggt 117  Q
    |||| |||||||| ||||||| ||||||||||||||||||| ||||||||  | ||||||||||||||||||||||||||| ||||| || |||||||||    
T  21832554 ttgatggggagcatgatgaatagatggactcacacttgaggcggagtgtta-tgtgcaagtgtgagttatatgtcccacattggatagaaaagtaaaggt 21832456  T
Q  118 tgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||    
T  21832455 tgaacaccttataagtaagaggactcataaactcatagccttaaggttttgggtaagagtg 21832395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 2 - 178
Target Start/End: Complemental strand, 32462790 - 32462610
Alignment:
Q  2 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacat 98  Q
    ||||||||||||  |||||| ||||||||| ||||||||||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||    
T  32462790 aagtaagagctttcgcttgaagggggagcatgatgaattgatggactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacat 32462691  T
Q  99 cggataaaatagtaaa-ggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    || || ||| |||||| ||||||||||||||||||||||| || ||||||||| ||||| |||||||||||| ||||||||    
T  32462690 cgaatgaaagagtaaaaggttgaacaccttataagtaagatgatccataaacctattgctttaaggttttggataagagtg 32462610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 64 - 188
Target Start/End: Original strand, 39389062 - 39389186
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||    
T  39389062 tgttggtttgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttaaaactaagaggacccataaacccattgtcttaagg 39389161  T
Q  164 ttttgggtaagagtgcgatgtctct 188  Q
    ||||||||||||||| | |||||||    
T  39389162 ttttgggtaagagtgtggtgtctct 39389186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 178
Target Start/End: Complemental strand, 29644792 - 29644633
Alignment:
Q  22 gggggagcacgatgaattgatggactcacacttgaggggga---gtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggtt 118  Q
    ||||||||||||| || ||||| | |||||||||||||||    || || || |||||||||||||||||||||||||||||||| ||| ||||||||||    
T  29644792 gggggagcacgataaagtgatgaagtcacacttgaggggggaatgtttttgtgtgcaagtgtgagttatatgtcccacatcggattaaagagtaaaggtt 29644693  T
Q  119 gaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  29644692 gaacaccttataagtaagagaacccataaacccattgtcttaaggttttgggtaagagtg 29644633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 32589704 - 32589820
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||| |||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32589704 tgcaagtgtgagt-atatgtcccacataagataaaataataaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 32589802  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||||||||||||||    
T  32589803 aagagtgcgatgtctctc 32589820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 3135293 - 3135114
Alignment:
Q  10 gcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtt-tgcaagtgtgagttatatgtcccacatcggataaaat 108  Q
    ||||| ||| |||||||||||||||||||||||| |||||||||||| || ||||||| ||| || |   ||||||||||||||||||||||||||||||    
T  3135293 gcttccgctagagggggagcacgatgaattgatg-actcacacttgatggtgagtgtttgttgtgtacaagtgagttatatgtcccacatcggataaaat 3135195  T
Q  109 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||| |||||||||||||||||||| || ||||||||||||| |||| |||||||||| ||||||||| | ||||||||    
T  3135194 agtaaatgttgaacaccttataagtaaaagaacccataaacccactgccataaggttttgagtaagagtgtggtgtctctc 3135114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 35946524 - 35946639
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  35946524 caagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataaacccgttgccttaaggttttgggtaa 35946623  T
Q  174 gagtgcgatgtctctc 189  Q
     |||| | ||||||||    
T  35946624 aagtgtggtgtctctc 35946639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 26 - 178
Target Start/End: Complemental strand, 42342296 - 42342142
Alignment:
Q  26 gagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 123  Q
    ||||| |||||||||||||||||||||||||||||||||||||  || ||||||||||| | |||||| ||||||||||||||| |||||| ||| ||      
T  42342296 gagcatgatgaattgatggactcacacttgagggggagtgttgttgtgtgcaagtgtgattcatatgttccacatcggataaaagagtaaatgttcaatg 42342197  T
Q  124 ccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  42342196 ccttataagtaagaggactcataaactcattgccttaaggttttgggtaagagtg 42342142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 43346947 - 43346832
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  43346947 caagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagagaacccataaactcattgccttaaggttttgggtaa 43346848  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| | ||||||||    
T  43346847 gagtgtggtgtctctc 43346832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 22304208 - 22304301
Alignment:
Q  34 tgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacctt 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22304208 tgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacctt 22304301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 63 - 189
Target Start/End: Complemental strand, 39935124 - 39934996
Alignment:
Q  63 gtgttggtttgcaagtgtgag--ttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgcctta 160  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39935124 gtgttggtttgcaagtgtgagagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggatccataaacccattgcctta 39935025  T
Q  161 aggttttgggtaagagtgcgatgtctctc 189  Q
    | |||||| ||||||||| ||||||||||    
T  39935024 aagttttgagtaagagtgtgatgtctctc 39934996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 175
Target Start/End: Complemental strand, 41359971 - 41359820
Alignment:
Q  21 agggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggtt 118  Q
    |||| ||||| ||||||| |||| |||||||||| |||||||||||||  || ||||||||||||||||    ||||||||||||| |||||||||||||    
T  41359971 agggagagcatgatgaatagatg-actcacacttaagggggagtgttgttgtgtgcaagtgtgagttat----cccacatcggatacaatagtaaaggtt 41359877  T
Q  119 gaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaga 175  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41359876 gaataccttataagtaagaggacccataaacccattgccttaaggttttgggtaaga 41359820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 52634678 - 52634792
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  52634678 caagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacgccttataagtaaga-gacccataaacccattgccttaaggttttgggtaa 52634776  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| || |||||||    
T  52634777 gagtgtgacgtctctc 52634792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 29645060 - 29644954
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29645060 tgcaagtgtaagttatatgtcccacatcggataaaagagtaaaggttaaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggt 29644961  T
Q  172 aagagtg 178  Q
    |||||||    
T  29644960 aagagtg 29644954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 33803410 - 33803304
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||    
T  33803410 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccattgcattaaggtattgggt 33803311  T
Q  172 aagagtg 178  Q
    |||||||    
T  33803310 aagagtg 33803304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 12114720 - 12114603
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||| |||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12114720 tgcaagtgtaagttatatatcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggt 12114621  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  12114620 aagagtgtggtgtctctc 12114603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 42342546 - 42342429
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  42342546 tgcaagtgtgagttatatgtcccacatccgataaaagagtaaaggttcaacaccttataagtaagaggacccataaatccattgtcttaaggttttgggt 42342447  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| || |||||||    
T  42342446 aagagtgtgacgtctctc 42342429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 37991133 - 37991018
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  37991133 caagtgtgagttatatgtctcacattggataaaatagtaaaggttgaacaccttataagtaagaggacctataaactcatcgccttaaggttttgggtaa 37991034  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| | ||||||||    
T  37991033 gagtgtggtgtctctc 37991018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 15772854 - 15772971
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||| |    
T  15772854 tgcaagtgtgagttatatgtcccatatcggataaaagagtaaatgttgaacaccttataagtaagaggacccataaactcattgctttaaggttttggat 15772953  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  15772954 aagagtgtggtgtctctc 15772971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 25739583 - 25739466
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||| |||||| || |||||||||||    
T  25739583 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaagttgaacatcatataagtaagaggacccataaactcattgcttttaggttttgggt 25739484  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| || |||||||    
T  25739483 aagagtgtgacgtctctc 25739466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 189
Target Start/End: Original strand, 9240079 - 9240266
Alignment:
Q  2 aagtaagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcg 100  Q
    ||||||||| ||| |||||||||| |||||  | |||| ||||||||||||||||||| ||||||||| | |||||||||||||||||||| ||||||||    
T  9240079 aagtaagagtttccgcttgaggggagagcataacgaatggatggactcacacttgaggaggagtgttg-tgtgcaagtgtgagttatatgttccacatcg 9240177  T
Q  101 gataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||| |  |||||| | ||||||||||||||||||||||||||||||| ||||| ||||||| ||| || ||||| || | ||||||||    
T  9240178 gatagagaagtaaaagctgaacaccttataagtaagaggacccataaatccattaccttaagatttcggataagaatgtggtgtctctc 9240266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 72 - 191
Target Start/End: Complemental strand, 54018356 - 54018237
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||||  |||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |  |||||||||||||||||    
T  54018356 tgcaagtgtgagttatatgtcctgcatcggataaaagagtaaagattgaacaccttataagtaagaggacccataaacctaacgccttaaggttttgggt 54018257  T
Q  172 aagagtgcgatgtctctcat 191  Q
    ||||||| | ||||||||||    
T  54018256 aagagtgtggtgtctctcat 54018237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 50612618 - 50612488
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccata-----aacccattgcct 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||     |||  |||  ||    
T  50612618 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaagattgaacaccttataagtaagaggactcataaatctaacatattatct 50612519  T
Q  159 taaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||||||||||||||| ||||||||||    
T  50612518 taaggttttgggtaagagtgtgatgtctctc 50612488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 37 - 189
Target Start/End: Complemental strand, 22304143 - 22303996
Alignment:
Q  37 attgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagta 134  Q
    ||||||||||||||||||||||| || ||||| | ||  |||||||||||||||||||||||||| |||||||||||||||||       ||||||||||    
T  22304143 attgatggactcacacttgagggagaatgttgttgtgtacaagtgtgagttatatgtcccacatcagataaaatagtaaaggt-------cttataagta 22304051  T
Q  135 agaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    || |||||||||||||||||||||||||||||||| |||||||| | ||||||||    
T  22304050 agcggacccataaacccattgccttaaggttttggataagagtgtggtgtctctc 22303996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 189
Target Start/End: Original strand, 11661902 - 11662069
Alignment:
Q  25 ggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaac 122  Q
    |||||||||| || ||||||||||||||||  ||||||||||||  || || |||||||||||| ||| ||||||| |||||||| ||||||||||||||    
T  11661902 ggagcacgataaagtgatggactcacacttttgggggagtgttgttgtatgtaagtgtgagttaaatgccccacattggataaaagagtaaaggttgaac 11662001  T
Q  123 accttataagtaagaggacccataaacccattgccttaagg-ttttgggtaagagtgcgatgtctctc 189  Q
    |||||| |||| ||||| | |||||||| |||||||||||| ||||||||||||||| | ||||||||    
T  11662002 accttaaaagtgagaggcctcataaaccaattgccttaaggtttttgggtaagagtgaggtgtctctc 11662069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 1634473 - 1634355
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaa-ggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttggg 170  Q
    ||||||||||||||||||||||||||||||||| || | |||| |||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  1634473 tgcaagtgtgagttatatgtcccacatcggatagaaaaataaaaggttaaacacattataagtaagaggacccataaacccattggcttaaggttttggg 1634374  T
Q  171 taagagtgcgatgtctctc 189  Q
    |||||||||| | ||||||    
T  1634373 taagagtgcggtatctctc 1634355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 8327904 - 8328021
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||| | |||||||||||||| ||||||||||  | ||||||||||||||||||    
T  8327904 tgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggatgaatatcttataagtaagagaacccataaacgtaatgccttaaggttttgggt 8328003  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  8328004 aagagtgtggtgtctctc 8328021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 32463057 - 32462941
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaa-ggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggta 172  Q
    ||||||||||||||||||||||||||||||| || |||||| ||||||| ||||||||||||||| ||| |||||||||||||||||||||||||| |||    
T  32463057 caagtgtgagttatatgtcccacatcggatagaagagtaaaaggttgaataccttataagtaagaagactcataaacccattgccttaaggttttgagta 32462958  T
Q  173 agagtgcgatgtctctc 189  Q
    |||||| | ||||||||    
T  32462957 agagtgtggtgtctctc 32462941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 45395811 - 45395694
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||| |||||||| |||||||||| |||||| |||||||||| ||||| ||||||||||||||| |||||||||||||| ||||| |||||||||    
T  45395811 tgcaagtgtaagttatatatcccacatcgaataaaagagtaaaggttaaacacgttataagtaagaggatccataaacccattgtcttaatgttttgggt 45395712  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  45395711 aagagtgtggtgtctctc 45395694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 64 - 188
Target Start/End: Original strand, 51886553 - 51886671
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| ||||||      |    
T  51886553 tgttggtttgcaagtgtgagttatatgtctcacatcgaataaaatagtaaaggttgaacatcatataagtaagaggacccataaactcattgc------g 51886646  T
Q  164 ttttgggtaagagtgcgatgtctct 188  Q
    |||||| |||||||| |||||||||    
T  51886647 ttttggataagagtgtgatgtctct 51886671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 49336843 - 49336728
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||||||||| ||||| ||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||| | ||||| ||| |||||||    
T  49336843 caagtgtgagttacatgtctcacatcggatagaaaagtaaaggttgaccaccttataagtaagaggacccataaacccatagtcttaaagttctgggtaa 49336744  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| | ||||||||    
T  49336743 gagtgtggtgtctctc 49336728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 39914252 - 39914369
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||| |||||| ||||||| |||| |||||||||||||||||| |||||||||||||||||| | ||||||||  |||||| |    
T  39914252 tgcaagtgtgagttatatgtctcacatcagataaaacagtagaggttgaacaccttataaataagaggacccataaacctaatgccttaatattttggat 39914351  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  39914352 aagagtgtggtgtctctc 39914369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 178
Target Start/End: Complemental strand, 53118131 - 53118027
Alignment:
Q  73 gcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggta 172  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||  || ||||||||||||||||| |||||||||    
T  53118131 gcaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtgagaggattca-aaacccattgccttaagattttgggta 53118033  T
Q  173 agagtg 178  Q
    ||||||    
T  53118032 agagtg 53118027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 53577364 - 53577481
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||| || |||| ||| ||||||||  ||||||||||||| ||||||    
T  53577364 tgcaagtgtgagttatatgtcacacatcggataaaacagtaaaggttgaacatcttaaaaataagtggatccataaacatattgccttaaggtcttgggt 53577463  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  53577464 aagagtgtggtgtctctc 53577481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 31190017 - 31190126
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||        |||||||||||||||||    
T  31190017 tgcaagtgtgagtgatatgtcccacatcggataaaagagtaaaggttgaacaccttataagttagaggacccata--------gccttaaggttttgggt 31190108  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  31190109 aagagtgtggtgtctctc 31190126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 45901715 - 45901831
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaa-ggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggta 172  Q
    |||||||||||||||||||||||||||||||||| |  ||| ||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||| ||||    
T  45901715 caagtgtgagttatatgtcccacatcggataaaagaaaaaaaggttgaacaccttataagtaagaggacgcataaactcatggccttaaagtttttggta 45901814  T
Q  173 agagtgcgatgtctctc 189  Q
    |||||| | ||||||||    
T  45901815 agagtgtggtgtctctc 45901831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 178
Target Start/End: Complemental strand, 3384435 - 3384318
Alignment:
Q  61 gagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgcctta 160  Q
    |||||||||| |||||| ||||||||||||||||||||  ||||||| |||| ||||| ||||| ||||||| ||||||||||||||||  | |||||||    
T  3384435 gagtgttggtgtgcaagcgtgagttatatgtcccacatatgataaaacagtataggttaaacactttataaggaagaggacccataaacttaatgcctta 3384336  T
Q  161 aggttttgggtaagagtg 178  Q
    | ||||||||||||||||    
T  3384335 aagttttgggtaagagtg 3384318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 33175820 - 33175713
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggaccc---ataaacccattgccttaaggttttggg 170  Q
    ||||||||||||||||||| |||||| |||| || |||||||||||||||||||||||||||||| ||||   |||||| ||| ||||||||||||||||    
T  33175820 caagtgtgagttatatgtctcacatcagatagaaaagtaaaggttgaacaccttataagtaagagaacccataataaactcatagccttaaggttttggg 33175721  T
Q  171 taagagtg 178  Q
    ||||||||    
T  33175720 taagagtg 33175713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 64 - 145
Target Start/End: Original strand, 37726496 - 37726577
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccat 145  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||| ||||    
T  37726496 tgttggtttgcaagtgtgagttatatgtctcacatcggataaaatagtaaatgttgaataccttataagtaagaggatccat 37726577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 42584970 - 42584864
Alignment:
Q  82 agttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcga 181  Q
    ||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||| ||||||||| |||| |||||| ||||| | ||||||| |     
T  42584970 agttatatgtcccacatcggatagaagagtaaagattgaacaccttataagtaagaggatccataaaccaattgtcttaagattttgagaaagagtgtgg 42584871  T
Q  182 tgtctct 188  Q
    |||||||    
T  42584870 tgtctct 42584864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 53 - 178
Target Start/End: Complemental strand, 47964694 - 47964570
Alignment:
Q  53 ttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaccca 152  Q
    ||||||| |||||||| | |||||||||||||| |||||||| ||||||||| ||  ||  ||||||||| |  ||||||| |||||||||||||||| |    
T  47964694 ttgagggcgagtgttg-tgtgcaagtgtgagttgtatgtcccgcatcggatagaaatgtggaggttgaacgctatataagtgagaggacccataaaccta 47964596  T
Q  153 ttgccttaaggttttgggtaagagtg 178  Q
    ||||||||||||||||||||||||||    
T  47964595 ttgccttaaggttttgggtaagagtg 47964570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 25755396 - 25755500
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||| ||||||||||||||||||| |||||| |||||| | ||| ||| |||||||    
T  25755396 caagtgtgagttatatgtctcacatcagataaaagagtaaaggttgaataccttataagtaagaggactcataaatccattgtcctaaagttgtgggtaa 25755495  T
Q  174 gagtg 178  Q
     ||||    
T  25755496 aagtg 25755500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 33362425 - 33362349
Alignment:
Q  98 tcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaag 174  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  33362425 tcggataaaataataaaggttgaataccttataagtaagaggacccataaacccatttccttaagattttgggtaag 33362349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 75 - 164
Target Start/End: Complemental strand, 7767469 - 7767380
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggt 164  Q
    |||| ||||||||||||||||||||||||| || ||||||||||| |||| |||||| ||||||||| ||||||||||||| ||||||||    
T  7767469 aagtctgagttatatgtcccacatcggatagaaaagtaaaggttggacactttataactaagaggactcataaacccattgtcttaaggt 7767380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 44160702 - 44160605
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgg 169  Q
    ||||||||| ||||||||||  || || |||||||| | ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||    
T  44160702 tgcaagtgtcagttatatgtttcatattggataaaacaataaaggttgaacaccttataaataagaggatccataaacccattgtcttaaggttttgg 44160605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 74 - 188
Target Start/End: Complemental strand, 3135617 - 3135496
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa-----gtaagaggaccc--ataaacccattgccttaaggttt 166  Q
    ||||||||||||||||||||||| || ||||||| |||||| |||||||||||||| |     ||||||||||||  |||||||||||||||||||||||    
T  3135617 caagtgtgagttatatgtcccacctcagataaaagagtaaaagttgaacaccttattatattagtaagaggacccccataaacccattgccttaaggttt 3135518  T
Q  167 tgggtaagagtgcgatgtctct 188  Q
    | | |||||||| | |||||||    
T  3135517 tagataagagtgtggtgtctct 3135496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 39336387 - 39336281
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||||||||||||||| ||   |  ||||||||||| |||||||| |||||| |||||||| |||||| |||||||||||| |    
T  39336387 tgcaagtgtgagttatatgtcccacatcggatagaaagttggaggttgaacactttataagtgagaggatccataaactcattgctttaaggttttggat 39336288  T
Q  172 aagagtg 178  Q
    || ||||    
T  39336287 aatagtg 39336281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 74 - 139
Target Start/End: Original strand, 11661537 - 11661602
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagagg 139  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  11661537 caagtgtgagttatatgtcccacatcggataaaatagtaacggttaaacatcttataagtaagagg 11661602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 184
Target Start/End: Complemental strand, 46546480 - 46546371
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaag 174  Q
    ||||||||||||||||||| |||| ||||  ||  ||  ||||||||||| |||||||| |||| | ||||||||||||||||||||||||||| |||||    
T  46546480 aagtgtgagttatatgtcctacattggattgaaatgtggaggttgaacactttataagttagagaatccataaacccattgccttaaggttttgtgtaag 46546381  T
Q  175 agtgcgatgt 184  Q
    |||| |||||    
T  46546380 agtgtgatgt 46546371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 43346650 - 43346706
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacctta 128  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43346650 tgcaagtgtgagttgtatgtcccacatcggataaaatagtaaaggttgaacacctta 43346706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 178
Target Start/End: Complemental strand, 22303759 - 22303711
Alignment:
Q  130 aagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22303759 aagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 22303711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 52634990 - 52635046
Alignment:
Q  122 caccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||    
T  52634990 caccttataaataagaggacccataaactcattgccttaagattttgggtaagagtg 52635046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 47965073 - 47964967
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||   |||||||||| || |||  ||||| ||||   ||||||| ||||| | ||||| |||||||||||||| ||||||||    
T  47965073 tgcaagtgtgagttatatgttttacatcggatagaaaagtggaggttaaacattatataagtgagagggctcataagcccattgccttaagattttgggt 47964974  T
Q  172 aagagtg 178  Q
    |||||||    
T  47964973 aagagtg 47964967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 54017636 - 54017590
Alignment:
Q  142 ccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 188  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||    
T  54017636 ccataaacccattgccttaaggttttgggtaagagtgtggtgtctct 54017590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 171
Target Start/End: Original strand, 25991405 - 25991502
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||| ||||||||||||||  |||||  ||| || ||| ||||  |||||||| |||| ||| ||||||| | ||||||||||||||||||    
T  25991405 caagtgtgagtaatatgtcccacatcaaataaacaagttaatgttaaacattttataagtgagagaacctataaacctaatgccttaaggttttgggt 25991502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 8328308 - 8328368
Alignment:
Q  2 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgaggggg 61  Q
    ||||||||||||| |||||| |||||||  ||||| |||||||||||||||||||||||||    
T  8328308 aagtaagagcttccgcttgaagggggagatcgatgcattgatggactcacacttgaggggg 8328368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 12749211 - 12749275
Alignment:
Q  114 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||||||||| ||||||||  ||||||||||||||| ||||| |||||||||| | ||||||||    
T  12749211 aggttgaacactttataagtgtgaggacccataaaccaattgcattaaggtttttgataagagtg 12749275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 17732007 - 17731956
Alignment:
Q  127 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||| ||| | ||||||||||||||||||||||||||||| |||||||||    
T  17732007 tataagaaagggaacccataaacccattgccttaaggttttgagtaagagtg 17731956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 19033238 - 19033187
Alignment:
Q  127 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||| ||| | ||||||||||||||||||||||||||||| |||||||||    
T  19033238 tataagaaagggaacccataaacccattgccttaaggttttgagtaagagtg 19033187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 178
Target Start/End: Original strand, 25317161 - 25317264
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaag 174  Q
    ||||||||||||| ||||||||| | |||  || |||  ||||||| ||| || ||| | |||||||||||||||   |||||||||||||||||||||     
T  25317161 aagtgtgagttatgtgtcccacaccagatggaaaagtggaggttgagcactttgtaactgagaggacccataaacttgttgccttaaggttttgggtaaa 25317260  T
Q  175 agtg 178  Q
    ||||    
T  25317261 agtg 25317264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 189
Target Start/End: Complemental strand, 39336086 - 39336011
Alignment:
Q  114 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||| |||||| | | | ||| ||||||  |||||||||||||||||||||||||||| | ||||||||    
T  39336086 aggttgaacactttataaatgataagactcataaaatcattgccttaaggttttgggtaagagtgtggtgtctctc 39336011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 52634889 - 52634931
Alignment:
Q  26 gagcacgatgaattgatggactcacacttgagggggagtgttg 68  Q
    ||||||||||||||||| |||||||||||||||| ||||||||    
T  52634889 gagcacgatgaattgattgactcacacttgagggagagtgttg 52634931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 53596027 - 53596077
Alignment:
Q  139 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||| || ||||||||||||||||||||||| | ||||||||    
T  53596027 gacccataaacccgttaccttaaggttttgggtaagagtgtggtgtctctc 53596077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 53596342 - 53596392
Alignment:
Q  139 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||| || ||||||||||||||||||||||| | ||||||||    
T  53596342 gacccataaacccgttaccttaaggttttgggtaagagtgtggtgtctctc 53596392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 2299930 - 2300000
Alignment:
Q  27 agcacgatgaattgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccac 96  Q
    |||| ||| |||||||||||||||||||||||||||   ||||| | |||||||||| ||||||||||||||    
T  2299930 agcatgataaattgatggactcacacttgagggggatattgttg-tgtgcaagtgtgggttatatgtcccac 2300000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 104
Target Start/End: Complemental strand, 12747910 - 12747878
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggata 104  Q
    |||||||||||||||||||||||||||||||||    
T  12747910 tgcaagtgtgagttatatgtcccacatcggata 12747878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 17735081 - 17735041
Alignment:
Q  140 acccataaacccattgccttaaggttttgggtaagagtgcg 180  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  17735081 acccataaactcattgacttaaggttttgggtaagagtgcg 17735041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 19036350 - 19036310
Alignment:
Q  140 acccataaacccattgccttaaggttttgggtaagagtgcg 180  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  19036350 acccataaactcattgacttaaggttttgggtaagagtgcg 19036310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 53596542 - 53596626
Alignment:
Q  139 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggtcctagatgtccatctcattgcct 223  Q
    ||||||||||||||||| |||||| |||| |||||||||| | ||||||||   ||| |||||||||| ||  | ||||||||||    
T  53596542 gacccataaacccattgacttaagattttaggtaagagtgtggtgtctctctcatagcgggtcctagacgtttagctcattgcct 53596626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 16871049 - 16871011
Alignment:
Q  140 acccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  16871049 acccataaactcattgccttaaggttttaggtaagagtg 16871011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 36986101 - 36986040
Alignment:
Q  77 gtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 138  Q
    |||||||||||||||||||||||| ||| || ||| ||||||||  || |||||||| ||||    
T  36986101 gtgtgagttatatgtcccacatcgaatagaaaagtgaaggttgagaactttataagtgagag 36986040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 37011540 - 37011479
Alignment:
Q  77 gtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 138  Q
    |||||||||||||||||||||||| ||| || ||| ||||||||  || |||||||| ||||    
T  37011540 gtgtgagttatatgtcccacatcgaatagaaaagtgaaggttgagaactttataagtgagag 37011479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 50329427 - 50329391
Alignment:
Q  135 agaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  50329427 agaggacccataaatccaatgccttaaggttttgggt 50329391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 2e-79; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 44290688 - 44290511
Alignment:
Q  1 aaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 99  Q
    ||||||||||||||  ||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44290688 aaagtaagagcttccccttgaagggggagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 44290589  T
Q  100 ggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 177  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44290588 ggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 44290511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 5 - 189
Target Start/End: Complemental strand, 48588714 - 48588529
Alignment:
Q  5 taagagcttctgcttgaggggg-agcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggat 103  Q
    |||||||||| |||||| |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  48588714 taagagcttccgcttgaaggggtagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtgagttctatgtccgacatcggat 48588615  T
Q  104 aaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||||||||| ||||||||    
T  48588614 aaaatagtaaaggttgaacaccttataagtaagaagacccgtaaattcattgccttaaggttttgggtaagagtgcggtgtctctc 48588529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 6 - 151
Target Start/End: Complemental strand, 3537372 - 3537226
Alignment:
Q  6 aagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggata 104  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3537372 aagagcttccgcttgaagggggagcaagatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggata 3537273  T
Q  105 aaatagtaaaggttgaacaccttataagtaagaggacccataaaccc 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  3537272 aaatagtaaaggttgaacaccttataagtaagaggacccataaaccc 3537226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 2 - 189
Target Start/End: Original strand, 34364852 - 34365042
Alignment:
Q  2 aagtaagagcttctgcttgagggggagcacgatgaatt-gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacat 98  Q
    ||||||||||||| | ||||||||||||| ||||||   |||||||||||||||||||||||||||||  || ||||||||||||||||||||| |||||    
T  34364852 aagtaagagcttccgattgagggggagcatgatgaaaaagatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcacacat 34364951  T
Q  99 cggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||    
T  34364952 cggataaaataataaaggttgaacaccttataagtaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctctc 34365042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 5 - 178
Target Start/End: Complemental strand, 22077719 - 22077547
Alignment:
Q  5 taagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggata 104  Q
    |||||||||| |||||| |||||||| |||||||  |||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||    
T  22077719 taagagcttccgcttgatggggagcatgatgaatacatggactcacacttgagggggagtgttg-tgtgcaagtgtgagttatatgtctcacatcggata 22077621  T
Q  105 aaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
     || ||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  22077620 gaaaagtaaaggttgaacaccttataagtaagaggacccataaactcgtagccttaaggttttgggtaagagtg 22077547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 26661754 - 26661563
Alignment:
Q  1 aaagtaagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccaca 97  Q
    |||||||||||||| |||||| ||| ||| | ||||||| ||||||||||||||| ||||||||||||| | ||  ||||||||||||||||||||||||    
T  26661754 aaagtaagagcttccgcttgaagggagagtatgatgaatagatggactcacacttaagggggagtgttgttgtgtacaagtgtgagttatatgtcccaca 26661655  T
Q  98 tcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||| ||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  26661654 tcgggtaaaagagtaaaggttgaacaccttataagtgagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 26661563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 22 - 178
Target Start/End: Original strand, 41157323 - 41157481
Alignment:
Q  22 gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttg 119  Q
    ||||||||||||| ||||||||||||||||||| ||||||||| |||  || |||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  41157323 gggggagcacgataaattgatggactcacacttaagggggagtattgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaagttg 41157422  T
Q  120 aacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  41157423 aacaccttataagtaagaggacccataaacccattgcctttaggttttgagtaagagtg 41157481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 62 - 173
Target Start/End: Complemental strand, 44290993 - 44290882
Alignment:
Q  62 agtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44290993 agtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 44290894  T
Q  162 ggttttgggtaa 173  Q
    ||||||||||||    
T  44290893 ggttttgggtaa 44290882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 2 - 189
Target Start/End: Original strand, 37556038 - 37556228
Alignment:
Q  2 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacat 98  Q
    ||||||||||||  |||||| ||||| ||| ||| || |||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||    
T  37556038 aagtaagagctttagcttgaagggggggcaggataaagtgatggactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacat 37556137  T
Q  99 cggataaaa-tagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||| |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||| | ||||||||    
T  37556138 cggataaaaatagtaaaggttgaacatcttataagtaagaggacc-ataaacccatagccttaaggttttgggtaagagtgtggtgtctctc 37556228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 3550712 - 3550837
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  3550712 tgttggttggcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaag 3550811  T
Q  164 ttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||| | ||||||||    
T  3550812 ttttgggtaagagtgtggtgtctctc 3550837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 17294579 - 17294694
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17294579 caagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttttgggtaa 17294678  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| | ||||||||    
T  17294679 gagtgtggtgtctctc 17294694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 32594880 - 32594757
Alignment:
Q  66 ttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggtt 165  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  32594880 ttggtttgcaagtgtgagttatatgtcctacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgtcttaaggtt 32594781  T
Q  166 ttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||| | ||||||||    
T  32594780 ttgggtaagagtgtggtgtctctc 32594757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 34364507 - 34364624
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||    
T  34364507 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccgtaaacccatagccttaaggttttgggt 34364606  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| ||||||||||    
T  34364607 aagagtgtgatgtctctc 34364624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 41759475 - 41759600
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| || ||||||| ||||||||||||||    
T  41759475 tgttggtttgcaagtgtgagttatatgtcacacatcggataaaatagtaaaagttgaacaccttataagtaagatgatccataaatccattgccttaagg 41759574  T
Q  164 ttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||| | ||||||||    
T  41759575 ttttgggtaagagtgtggtgtctctc 41759600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 5 - 178
Target Start/End: Complemental strand, 66314 - 66139
Alignment:
Q  5 taagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat-atgtcccacatcgga 102  Q
    |||||||||| |||||| |||||| || ||||||| ||||||||||||||||||||| ||||||| | ||||||||||||| || ||||| |||||||||    
T  66314 taagagcttccgcttgatgggggaacatgatgaatagatggactcacacttgaggggaagtgttg-tgtgcaagtgtgagtaatcatgtctcacatcgga 66216  T
Q  103 taaaatagtaaaggtt-gaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    || || |||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  66215 tagaaaagtaaaggtttgaacaccttataagtaagaggacccataaacctatggccttaaggttttgggtaagagtg 66139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 45 - 189
Target Start/End: Original strand, 11977251 - 11977397
Alignment:
Q  45 actcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacc 142  Q
    |||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||| ||     
T  11977251 actcacacttgagggggagtgttgctgtgtacaagtgtgagttatatgtcccacatcgggtaaaacagtaaatgttgaacaccttataagtaagagcact 11977350  T
Q  143 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||| | ||||||||||||||||||||||||| ||||||||||    
T  11977351 cataaacctaatgccttaaggttttgggtaagagtgtgatgtctctc 11977397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 21 - 178
Target Start/End: Complemental strand, 30630846 - 30630690
Alignment:
Q  21 agggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttga 120  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||  | ||||||||||| ||||||||| |||||||||||||| | ||||||||      
T  30630846 agggggagcatgatgaattgatggactcacacttgagagggagtgtta-tgtgcaagtgtgatttatatgtctcacatcggataaaaaattaaaggtttg 30630748  T
Q  121 acaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  30630747 acactttataagtaagagaacccataaacacattgccttaaagttttgggtaagagtg 30630690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 64 - 178
Target Start/End: Complemental strand, 3537765 - 3537651
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    |||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||    
T  3537765 tgttggtttgtacgtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttatgagtaagaggacctataaacccattggcttaagg 3537666  T
Q  164 ttttgggtaagagtg 178  Q
    |||||||||||||||    
T  3537665 ttttgggtaagagtg 3537651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 29798199 - 29798316
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |    
T  29798199 tgcaagtgtgagttatatgtcctacattggataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggtcttggat 29798298  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  29798299 aagagtgtggtgtctctc 29798316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 41142372 - 41142473
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  41142372 tgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaaaaggacccataaacccattgccttaaggtttttggt 41142471  T
Q  172 aa 173  Q
    ||    
T  41142472 aa 41142473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 50052189 - 50052064
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||  ||||| |    
T  50052189 tgttggtttttaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacctattttcttaaag 50052090  T
Q  164 ttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||| | ||||||||    
T  50052089 ttttgggtaagagtgtggtgtctctc 50052064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 41184583 - 41184489
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttt 166  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41184583 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttt 41184489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 41156991 - 41157107
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||| |||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  41156991 tgcaagtgtgaattatatgtcccataacggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcattgctttaaggttttgggt 41157090  T
Q  172 aagagtgcgatgtctct 188  Q
    ||||||| | |||||||    
T  41157091 aagagtgtggtgtctct 41157107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 50051881 - 50051777
Alignment:
Q  1 aaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 99  Q
    ||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50051881 aaagtaagagcttctgcttgaagggggagcatgatgaattaatggactcacacttgagggggaatgttggtttgcaagtgtgagttatatgtcccacatc 50051782  T
Q  100 ggata 104  Q
    |||||    
T  50051781 ggata 50051777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 187
Target Start/End: Complemental strand, 22077349 - 22077153
Alignment:
Q  2 aagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgg 101  Q
    ||||||||||||  ||||||  | ||||| ||||||| ||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  22077349 aagtaagagctttcgcttgatagcgagcatgatgaatagatggacacacacttgagggggagtgttg-tgtgcaagtgtgagttatatgtcccacatcgg 22077251  T
Q  102 ata--aaat----------agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctc 187  Q
    |||  ||||          ||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||| || |||||    
T  22077250 atagaaaatcggatagaaaagtaaaggttgaataccttataagtaagaggacccataaactcattgccctaaggttttggataagagtgtgacgtctc 22077153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 31767319 - 31767213
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||    
T  31767319 tgcaagtgtgggttatatgttccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccattaacctaatgccttaaggttttgggt 31767220  T
Q  172 aagagtg 178  Q
    |||||||    
T  31767219 aagagtg 31767213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 80 - 189
Target Start/End: Original strand, 14318875 - 14318984
Alignment:
Q  80 tgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgc 179  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||     
T  14318875 tgagttatatgttccacgtcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaatctattgccttaaggttttgggtaagagtgt 14318974  T
Q  180 gatgtctctc 189  Q
    | ||||||||    
T  14318975 ggtgtctctc 14318984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 73 - 178
Target Start/End: Original strand, 40082408 - 40082512
Alignment:
Q  73 gcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggta 172  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||  ||||||||||||||||||||||    
T  40082408 gcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagga-tcataaattcattgccttaaggttttgggta 40082506  T
Q  173 agagtg 178  Q
    ||||||    
T  40082507 agagtg 40082512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 76 - 189
Target Start/End: Original strand, 9955911 - 9956026
Alignment:
Q  76 agtgtgagttatatgtcccacatcggataaaata-gtaaaggttgaacaccttataagtaagaggacccat-aaacccattgccttaaggttttgggtaa 173  Q
    |||||||||||||||||||||||| ||||||| | ||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  9955911 agtgtgagttatatgtcccacatcagataaaaaaagtaaaggttgaacacattataagtaagaggacccattaaaccaattgccttaaggttttgggtaa 9956010  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| ||||||||||    
T  9956011 gagtgtgatgtctctc 9956026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 26662054 - 26661939
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||||||||||| ||||| ||| ||||||| ||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  26662054 caagtgtgagttatatatcccatatcagataaaagagtaaaggttgaacaccttataagtgagaagacccataaaccgattgccttaaggttttgggtaa 26661955  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| | ||||||||    
T  26661954 gagtgtggtgtctctc 26661939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 5320123 - 5320017
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||| |||||||||||| || |||||| |||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||    
T  5320123 tgcaagtgtgagttatatgttccacatcggatagaaaagtaaaagttgaacaccttataagtgagaggacccataaactcatagccttaaggttttgggt 5320024  T
Q  172 aagagtg 178  Q
    |||||||    
T  5320023 aagagtg 5320017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 63 - 189
Target Start/End: Complemental strand, 45494146 - 45494015
Alignment:
Q  63 gtgttggtttgcaagtgtgagtt-atatgtcccacatcggataaaatagtaaaggttgaacacc----ttataagtaagaggacccataaacccattgcc 157  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||||||||||||||||    
T  45494146 gtgttggtttgcaagtgtgagtttatatgtcccacatcggataaaatagtaaaggttgaacaccatatatataagtaagatgatccataaacccattgcc 45494047  T
Q  158 ttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||| ||||||| |||||||| | ||||||||    
T  45494046 ttaaagttttggataagagtgtggtgtctctc 45494015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 178
Target Start/End: Complemental strand, 38804516 - 38804407
Alignment:
Q  69 gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttg 168  Q
    |||| ||||||||||||||| ||||||||||| |||||| |||||||||||||||| ||||||||||||||| ||||||||||||  |||||||||||||    
T  38804516 gtttacaagtgtgagttatacgtcccacatcgaataaaagagtaaaggttgaacacattataagtaagaggatccataaacccataaccttaaggttttg 38804417  T
Q  169 ggtaagagtg 178  Q
    ||||||||||    
T  38804416 ggtaagagtg 38804407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 34649440 - 34649544
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   || ||||||||||| | ||||||||||||||||||||    
T  34649440 caagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtgcaagaacccataaacctaatgccttaaggttttgggtaa 34649539  T
Q  174 gagtg 178  Q
    |||||    
T  34649540 gagtg 34649544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 3875489 - 3875386
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||| || ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  3875489 tgcaagagtcagttatatgtcacacatcggataaaaaagtaaaggttgtacaccttataagtaagaggactcataaacccattgccttaaggttttaggt 3875390  T
Q  172 aaga 175  Q
    ||||    
T  3875389 aaga 3875386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 177
Target Start/End: Complemental strand, 66630 - 66525
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||| ||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||  || |||||||||||||||||    
T  66630 tgcaagtgtgagttatatgttccatatcggatagaaaagtaaaggttgaacaccttataagtaagaggatccataaacatatggccttaaggttttgggt 66531  T
Q  172 aagagt 177  Q
    ||||||    
T  66530 aagagt 66525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 63 - 189
Target Start/End: Complemental strand, 44043944 - 44043813
Alignment:
Q  63 gtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaa------aggttgaacaccttataagtaagaggacccataaacccattgc 156  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||      | |||||||||||||||||||||| |||||||||||||||||     
T  44043944 gtgttggtttgcaagtgt-agttatatgtcccacatcgaataaaatagtaatagtaaatgttgaacaccttataagtaagatgacccataaacccattgt 44043846  T
Q  157 cttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||| ||||||||||||||| | ||||||||    
T  44043845 cttaagattttgggtaagagtgtggtgtctctc 44043813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 24600472 - 24600355
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||||||  ||||||||||||| || ||||||| ||||| |||||||||||| ||    
T  24600472 tgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacatattataagtaagagaactcataaactcattgtcttaaggttttgtgt 24600373  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  24600372 aagagtgtggtgtctctc 24600355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 37850758 - 37850641
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||| ||||||||||| | ||  ||||||||| || |    
T  37850758 tgcaagtgtgagttatatgtcccacatcgcataaaacagtagaggttgaacaccttataagtaagagaacccataaacctaatgttttaaggtttcggat 37850659  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  37850658 aagagtgtggtgtctctc 37850641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 39066358 - 39066241
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||| | |||||||||||| || ||||||||||||||||||||||| ||||| ||||||||||  ||||| ||||||||||||| |    
T  39066358 tgcaagtgtgagttatatattccacatcggatagaaaagtaaaggttgaacaccttataactaagatgacccataaaatcattgtcttaaggttttggat 39066259  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  39066258 aagagtgtggtgtctctc 39066241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 178
Target Start/End: Complemental strand, 32168853 - 32168750
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    ||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||      ||||||||||||||||||||||||||| |||    
T  32168853 tgttggtttgcaagtgtgagttatatgtcc-----cggataaaatagtaaaggttgaacacct------taagaggacccataaacccattgccttgagg 32168765  T
Q  164 ttttgggtaagagtg 178  Q
    |||||||||||||||    
T  32168764 ttttgggtaagagtg 32168750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 72 - 147
Target Start/End: Original strand, 45084382 - 45084457
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataa 147  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45084382 tgcaagtgtgagttatatctcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataa 45084457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 37555733 - 37555846
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaag 174  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||| || ||||||||||||||| || |||| || | ||||||||||||||||||||    
T  37555733 aagtgtgagttataagtcccacatcggataaaatagtgaaggttgaatacattataagtaagagga-ccttaaatccttagccttaaggttttgggtaag 37555831  T
Q  175 agtgcgatgtctctc 189  Q
    |||| | ||||||||    
T  37555832 agtgtggtgtctctc 37555846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 78 - 178
Target Start/End: Original strand, 5575110 - 5575210
Alignment:
Q  78 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 177  Q
    ||||| ||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||| ||||| |||| || |||||||||||| |||||||    
T  5575110 tgtgaattatatgtcccacgtcggatagaagagtaaaggttgaacaccttataagtaagaggacctataaatccatagctttaaggttttggataagagt 5575209  T
Q  178 g 178  Q
    |    
T  5575210 g 5575210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 24132143 - 24132049
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttt 166  Q
    ||||| ||||||||||||||||| ||||||||| || ||||||||||||||||||||||| |||| ||| |||||||| ||||||||||||||||    
T  24132143 tgcaactgtgagttatatgtccctcatcggatagaaaagtaaaggttgaacaccttataaataaggggatccataaactcattgccttaaggttt 24132049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 22793279 - 22793396
Alignment:
Q  73 gcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaccca-ttgccttaaggttttgggt 171  Q
    |||||||||||||||||||||||||||| ||| || |||| |||||||| || |||||||| |||||| ||||||||||| |||||||| ||||||| ||    
T  22793279 gcaagtgtgagttatatgtcccacatcgtatagaaaagtagaggttgaaaactttataagtgagaggatccataaacccatttgccttacggttttgagt 22793378  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| || |||||||    
T  22793379 aagagtgtgacgtctctc 22793396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 47380012 - 47379891
Alignment:
Q  2 aagtaagagcttctgcttgaggggg-agcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcg 100  Q
    |||||||| |||| ||||||||||| |||||||||||||| |||||| ||| ||||||||||||||||   |||||||||||||||||| ||||||||||    
T  47380012 aagtaagaacttccgcttgaggggggagcacgatgaattgttggacttacatttgagggggagtgttg--atgcaagtgtgagttatatatcccacatcg 47379915  T
Q  101 gataaaatagtaaaggttgaacac 124  Q
    |||| || |||  |||||||||||    
T  47379914 gatagaaaagtggaggttgaacac 47379891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 50469306 - 50469180
Alignment:
Q  3 agtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 102  Q
    ||||||||||||||||||||| |||| | ||||||| |||  ||| ||||| |||||||||||||| | |||||||||||||||||||||| ||||| ||    
T  50469306 agtaagagcttctgcttgaggaggagtatgatgaatagataaactgacact-gagggggagtgttg-tgtgcaagtgtgagttatatgtcctacatcaga 50469209  T
Q  103 taaaatagtaaaggttgaacaccttataa 131  Q
    ||| | |||||||||||||||| ||||||    
T  50469208 taataaagtaaaggttgaacactttataa 50469180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 5528902 - 5528811
Alignment:
Q  82 agttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||||||| |||||||||||||| ||||||||||||||| ||||||| ||||||||| ||||||| ||||  |||||||||||||||||    
T  5528902 agttatatgtctcacatcggataaaagagtaaaggttgaacatcttataaataagaggactcataaactcattttcttaaggttttgggtaa 5528811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 44685456 - 44685551
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaagg-ttgaacaccttataagtaagaggacccataaacccattgccttaaggttt 166  Q
    |||||||||||||||||||||||| |||||||| || |||||||| ||||| |||||||||||||||||||| |||||| ||||||||||| ||||    
T  44685456 tgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaatgttt 44685551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 21378199 - 21378118
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccat 153  Q
    ||||||||| |||||||||||||| |||||||| || ||||||||||||| | |||||||||||||||||||||||||||||    
T  21378199 tgcaagtgtcagttatatgtcccagatcggatagaacagtaaaggttgaatatcttataagtaagaggacccataaacccat 21378118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 22077986 - 22077881
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||   | |||||||| || | ||||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||| ||||    
T  22077986 tgcaagtgtgagttatatgttttaaatcggatagaaaaataaaggttgaacatcttataagtaagaggacccataaactcatagcc-taaggtttggggt 22077888  T
Q  172 aagagtg 178  Q
    |||||||    
T  22077887 aagagtg 22077881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 19283613 - 19283507
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||||||| |||||| || |||  ||||||| ||| || ||| | ||||||| ||||||| ||| ||||||||||||||| |    
T  19283613 tgcaagtgtgagttatatgtcccacaccggatagaaaagtggaggttgagcactttgtaaatgagaggacacataaactcatcgccttaaggttttggat 19283514  T
Q  172 aagagtg 178  Q
    |||||||    
T  19283513 aagagtg 19283507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 24448212 - 24448383
Alignment:
Q  6 aagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataa 105  Q
    ||||||||  |||||||||  |||||||||||||||||| |||||| ||||||||||||||| || ||||||||| ||||||||||   |||||  | |     
T  24448212 aagagctttcgcttgagggaaagcacgatgaattgatgggctcacaattgagggggagtgtt-gtgtgcaagtgtaagttatatgttagacatctcaaag 24448310  T
Q  106 aatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    || |||  | ||||||||  |||||||| ||||| | ||||||| ||||| |||||| |||||| ||| ||||    
T  24448311 aaaagtggaagttgaacattttataagtgagagggctcataaactcattgtcttaagattttggataaaagtg 24448383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 45839629 - 45839748
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggtt-----gaacaccttataagtaagaggacccataaacccattgccttaaggttttg 168  Q
    ||||| ||||||||||||||||||||||||| || | ||||||||     ||||||||||||||||||| ||||||||||   | |||||||||||||||    
T  45839629 caagtatgagttatatgtcccacatcggatagaa-aataaaggttgaatcgaacaccttataagtaagaagacccataaatgtaatgccttaaggttttg 45839727  T
Q  169 ggtaagagtgcgatgtctctc 189  Q
    ||||||| || | ||||||||    
T  45839728 ggtaagattgtggtgtctctc 45839748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 1188746 - 1188640
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||| ||| |||||||| || |||  |||||||| |  |||||||| ||| ||| ||||||| |||||| ||||||||||||||    
T  1188746 tgcaagtgtgagttatatgttccatatcggatagaaaagtggaggttgaatattttataagtgagaagactcataaactcattgctttaaggttttgggt 1188647  T
Q  172 aagagtg 178  Q
    || ||||    
T  1188646 aaaagtg 1188640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 41184249 - 41184198
Alignment:
Q  6 aagagcttctgcttgagggggagcacgatgaattgatggactcacacttgag 57  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  41184249 aagagcttccgcttgagggggagcacgatgaagtgatggactcacacttgag 41184198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 1187522 - 1187405
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||| ||||||||| ||||||| ||| || |||  ||||| ||||  |||||||| ||| ||||||||||| |||| ||||||| ||||| ||    
T  1187522 tgcaagtgtgaattatatgtctcacatcgaatataaaagtggaggttaaacattttataagtgagaagacccataaactcattaccttaagattttgagt 1187423  T
Q  172 aagagtgcgatgtctctc 189  Q
    || |||| || |||||||    
T  1187422 aaaagtgtgacgtctctc 1187405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 4956218 - 4956297
Alignment:
Q  99 cggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||| || ||||||||||||||| |||||||||||||||| |||||||| ||||||  ||| ||||| ||||| ||||    
T  4956218 cggatagaaaagtaaaggttgaacatcttataagtaagaggatccataaactcattgctctaaagttttaggtaaaagtg 4956297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 72 - 119
Target Start/End: Complemental strand, 35154197 - 35154150
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttg 119  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  35154197 tgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttg 35154150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 4878803 - 4878869
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 138  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||| |||||||  |||||||| ||||    
T  4878803 tgcaattgtgagttatatgttccacatcggataaaatagtgaagcttgaacattttataagtgagag 4878869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 41184197 - 41184152
Alignment:
Q  121 acaccttataagtaagaggacccataaacccattgccttaaggttt 166  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||    
T  41184197 acactttataagtaagaggatccataaacccattgccttaaggttt 41184152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 10351202 - 10351266
Alignment:
Q  114 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||||||||| |||||||| |||| |||||||||| |||| | ||||| |||||||||||||||    
T  10351202 aggttgaacactttataagtgagagaacccataaacacattactttaagattttgggtaagagtg 10351266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 1188457 - 1188392
Alignment:
Q  2 aagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg 68  Q
    |||||||||||||  ||||| ||| |||| |||||||||||||||||||||||||||  ||||||||    
T  1188457 aagtaagagcttccacttgaaggg-agcatgatgaattgatggactcacacttgaggatgagtgttg 1188392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 4266948 - 4266875
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaaga 137  Q
    ||||| ||| ||| |||||||||||||||| ||||  ||||||| |||||| ||||||||| ||| ||||||||    
T  4266948 tgttgttttacaaatgtgagttatatgtcctacattagataaaagagtaaatgttgaacacattagaagtaaga 4266875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 3537547 - 3537495
Alignment:
Q  6 aagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgag 57  Q
    ||||||||| |||||| ||||||||| ||||| ||||||||||||||||||||    
T  3537547 aagagcttccgcttgaagggggagcatgatgatttgatggactcacacttgag 3537495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 30630972 - 30630912
Alignment:
Q  81 gagttatatgtcccacatcggataaaatagt-aaaggttgaacaccttataagtaagagga 140  Q
    ||||||||||||  ||||||||||||| | | ||||| |||||||||||||||||||||||    
T  30630972 gagttatatgtcttacatcggataaaaaaattaaaggctgaacaccttataagtaagagga 30630912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 47380323 - 47380258
Alignment:
Q  26 gagcacgatgaattgatggactcacacttgagggg--gagtgttggtttgcaagtgtgagttatatg 90  Q
    ||||| |||||||||||||| ||||||||||||||  || |||| || |||||||||||||||||||    
T  47380323 gagcatgatgaattgatggattcacacttgaggggaagattgtt-gtgtgcaagtgtgagttatatg 47380258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 11977015 - 11977061
Alignment:
Q  143 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||||    
T  11977015 cataaacctaatgccttaaggttttgggtaagagtgtggtgtctctc 11977061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 44091909 - 44091970
Alignment:
Q  87 tatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 148  Q
    |||||| |||||| |||  || |||||||||||||||| |||||||| |||| |||||||||    
T  44091909 tatgtcacacatcagatgtaaaagtaaaggttgaacactttataagtgagagaacccataaa 44091970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 9956258 - 9956214
Alignment:
Q  145 taaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  9956258 taaacacattgtcttaatgttttgggtaagagtgtgatgtctctc 9956214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 35154106 - 35154046
Alignment:
Q  127 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctc 187  Q
    ||||||||||||| |||||||||  |||| ||||||||||| || ||||||| | ||||||    
T  35154106 tataagtaagagggcccataaactgattgtcttaaggtttttggcaagagtgtggtgtctc 35154046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 146; Significance: 5e-77; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 3669988 - 3670177
Alignment:
Q  1 aaagtaagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 99  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3669988 aaagtaagagcttctgcttgaagggtgagcatgatgaattgatggactcacacttgagggggactgttggtttgcaagtgtgagttatatgtcccacatc 3670087  T
Q  100 ggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| | ||||||||    
T  3670088 ggataaaatagtaaaggtttaacaccttataagtatgaggacccataaacctatttccttaaggttttgggtaagagtgtggtgtctctc 3670177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 1014101 - 1013913
Alignment:
Q  1 aaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 99  Q
    |||||||||||||| |||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1014101 aaagtaagagcttccgcttgaagggggagtatgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgttccacatc 1014002  T
Q  100 ggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 188  Q
    ||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||  |||||| ||||||||| | |||||||    
T  1014001 ggataaaatagtaaaagttgaacaccctataagtaagaggaccaataaacccattgccttagagttttgagtaagagtgtgttgtctct 1013913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 2 - 178
Target Start/End: Original strand, 40518512 - 40518688
Alignment:
Q  2 aagtaagagcttctgcttgaggggg-agcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcg 100  Q
    |||||||||||||  |||||||||| |||| ||||||||||||||||||||||||||||||||| |||  || ||||||||||||||||||||||||||     
T  40518512 aagtaagagcttccacttgaggggggagcatgatgaattgatggactcacacttgagggggagtattgtgtt-caagtgtgagttatatgtcccacatca 40518610  T
Q  101 gataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||| || ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||    
T  40518611 gatagaaaagtaaaggttgaacaccttataaataagaggacccataaacccaatgacttaaggttttgggtaagagtg 40518688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 22 - 189
Target Start/End: Original strand, 9309303 - 9309472
Alignment:
Q  22 gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttg 119  Q
    ||||||||||||| || ||||||||||||| ||||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  9309303 gggggagcacgataaagtgatggactcacaattgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaatgttg 9309402  T
Q  120 aacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| | ||||||||||| | ||||||||    
T  9309403 aacaccttataagtaagaggacccttaaactcattgccttaaggtgtcgggtaagagtgtggtgtctctc 9309472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 63 - 189
Target Start/End: Original strand, 3669678 - 3669804
Alignment:
Q  63 gtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag 162  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  3669678 gtgttggtttgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaag 3669777  T
Q  163 gttttgggtaagagtgcgatgtctctc 189  Q
    |||||||||||||||| | ||||||||    
T  3669778 gttttgggtaagagtgtggtgtctctc 3669804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 189
Target Start/End: Original strand, 30359539 - 30359726
Alignment:
Q  5 taagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcgg 101  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||| ||||| | ||  ||||||||||||||||||| |||||| |    
T  30359539 taagagcttccgcttgaagggggagcatgataaattgatggactcacacttgagggggaatgttgttgtgtacaagtgtgagttatatgtctcacatcag 30359638  T
Q  102 ataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||| |||||| |||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||||||||| | ||||||||    
T  30359639 ataaaagagtaaaagttgaacaccttataagtaagaggactcataaacccataaccttaagattttgggtaagagtgtggtgtctctc 30359726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 23 - 178
Target Start/End: Original strand, 34835160 - 34835315
Alignment:
Q  23 ggggagcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttga 120  Q
    |||| ||| |||||||||||||||||||  |||||||||||||||| | ||  |||| ||||||||||||||||||||| ||||||||||||||||||||    
T  34835160 ggggggcatgatgaattgatggactcac--ttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacatccgataaaatagtaaaggttga 34835257  T
Q  121 acaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  34835258 acaccttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtg 34835315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 45122933 - 45123108
Alignment:
Q  2 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacat 98  Q
    ||||||||||||| |||||| |||||| || ||||||| |||||||| ||||||||||||||||||||  || |||||||||||||||||||||||||||    
T  45122933 aagtaagagcttccgcttgaagggggaacatgatgaatagatggacttacacttgagggggagtgttgctgtgtgcaagtgtgagttatatgtcccacat 45123032  T
Q  99 cggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagag 176  Q
    |||||||||||||||||||| |||||||  ||||||||| |||||||||||| |||  ||||||||||||||||||||    
T  45123033 cggataaaatagtaaaggttaaacacct--taagtaagatgacccataaacctattttcttaaggttttgggtaagag 45123108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 178
Target Start/End: Complemental strand, 8918994 - 8918816
Alignment:
Q  2 aagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatc 99  Q
    |||| |||||||| |||| | ||||  || ||||||| |||||||||||||||||||||||||||||  || ||||||||||||||| ||||||||||||    
T  8918994 aagttagagcttccgcttaaagggggacatgatgaatagatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttacatgtcccacatc 8918895  T
Q  100 ggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
     ||||  | |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  8918894 agatagcagagtaaaggttgaacactttataagtaagaggacccataaacctattgacttaaggttttgggtaagagtg 8918816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 27 - 178
Target Start/End: Original strand, 34835427 - 34835581
Alignment:
Q  27 agcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcg-gataaaatagtaaaggttgaaca 123  Q
    |||| ||||||||||||||||||||||||||||||||||||| | ||  |||| |||||||||||||||||| ||  |||||||||||||||||| ||||    
T  34835427 agcatgatgaattgatggactcacacttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacgtcccgataaaatagtaaaggtttaaca 34835526  T
Q  124 ccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  34835527 ccttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtg 34835581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 27 - 178
Target Start/End: Original strand, 34835693 - 34835847
Alignment:
Q  27 agcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcg-gataaaatagtaaaggttgaaca 123  Q
    |||| ||||||||||||||||||||||||||||||||||||| | ||  |||| |||||||||||||||||| ||  |||||||||||||||||| ||||    
T  34835693 agcatgatgaattgatggactcacacttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacgtcccgataaaatagtaaaggtttaaca 34835792  T
Q  124 ccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  34835793 ccttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtg 34835847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 62 - 189
Target Start/End: Original strand, 30441071 - 30441202
Alignment:
Q  62 agtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacc----ttataagtaagaggacccataaacccattgcc 157  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    |||||||||||||| |||||||||||||||||    
T  30441071 agtgttggtttgcaagtgtgagttatatgtcccacatcggctaaaatagtaaaggttgaacaccttaattataagtaagagggcccataaacccattgcc 30441170  T
Q  158 ttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||||||||| | ||||||||    
T  30441171 ttaaggttttgggtaagagtgtggtgtctctc 30441202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 3038446 - 3038342
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  3038446 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaaaaggacccataaacccattgccttaaggttttgggtaa 3038347  T
Q  174 gagtg 178  Q
    |||||    
T  3038346 gagtg 3038342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 18372465 - 18372342
Alignment:
Q  21 agggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttga 120  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| | || |||||||||||||||||| |||||||||||||||||||||||||||    
T  18372465 agggggagcacgataaagtgatggactcacacttgagggggagtgttgttgtgaaagtgtgagttatatgtctcacatcggataaaatagtaaaggttga 18372366  T
Q  121 acaccttataagtaagaggaccca 144  Q
    ||||||||||||||||| ||||||    
T  18372365 acaccttataagtaagaagaccca 18372342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 24 - 189
Target Start/End: Original strand, 6731856 - 6732012
Alignment:
Q  24 gggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 123  Q
    ||||||| ||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||       
T  6731856 gggagcatgatgaatagatggactcacatttgagggggagtgttgttttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttga--- 6731952  T
Q  124 ccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
          ||||||||| |||||||||  |||||||||||||||||| ||||||||| | ||||||||    
T  6731953 ------aagtaagagaacccataaattcattgccttaaggttttgagtaagagtgtggtgtctctc 6732012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 22 - 189
Target Start/End: Complemental strand, 45121865 - 45121697
Alignment:
Q  22 gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttg 119  Q
    ||||||||||||| || |||||||||||||||| ||||||||||||| | ||  |||||||||||| | ||||||||||||||||||| |||||||||||    
T  45121865 gggggagcacgataaagtgatggactcacacttaagggggagtgttgttgtgtacaagtgtgagttgt-tgtcccacatcggataaaagagtaaaggttg 45121767  T
Q  120 aacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    | ||||||||||||||||||| ||||||||| |  |||||||||||||| ||||||||| ||| ||||||    
T  45121766 atcaccttataagtaagaggatccataaacctacagccttaaggttttgagtaagagtgtgatatctctc 45121697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 178
Target Start/End: Original strand, 45122560 - 45122730
Alignment:
Q  2 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcg 100  Q
    ||||||||||||| ||| || ||||||||| ||||||| || | |||||||||||||||||||||||| | ||||||||      ||||| ||| |||||    
T  45122560 aagtaagagcttccgctggaagggggagcatgatgaatagaagaactcacacttgagggggagtgttg-tgtgcaagtg------atatggcccgcatcg 45122652  T
Q  101 gataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  45122653 gataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggtatgagtg 45122730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 45122215 - 45122098
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||  |||||||||||||||    
T  45122215 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagaacccataaactcattttcttaaggttttgggt 45122116  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  45122115 aagagtgtggtgtctctc 45122098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 75 - 178
Target Start/End: Original strand, 147454 - 147557
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaag 174  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||    
T  147454 aagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataaataagaggacccataaacctattgccttaaagttttgggtaag 147553  T
Q  175 agtg 178  Q
    ||||    
T  147554 agtg 147557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 18372907 - 18372785
Alignment:
Q  21 agggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttga 120  Q
    |||||||||||||| || |||||||||||||||||||| | ||||||| | || |||||||||||||||||| |||||||||||||||||||||||||||    
T  18372907 agggggagcacgataaagtgatggactcacacttgaggag-agtgttgttgtgaaagtgtgagttatatgtcacacatcggataaaatagtaaaggttga 18372809  T
Q  121 acaccttataagtaagaggaccca 144  Q
    ||||||||||||||||||||||||    
T  18372808 acaccttataagtaagaggaccca 18372785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 30359273 - 30359388
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  30359273 caagtgtgagttatatgtctcacatcggataaaagagtaaatgttgaacaccttataagcaagaggacccataaacccatagccttaaggttttgggtaa 30359372  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| | ||||||||    
T  30359373 gagtgtggtgtctctc 30359388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 34834878 - 34834993
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||||||||||||    
T  34834878 caagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagatgactcataaactcattgccttaaggttttgggtaa 34834977  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| | ||||||||    
T  34834978 gagtgtggtgtctctc 34834993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 6 - 176
Target Start/End: Complemental strand, 18373157 - 18372988
Alignment:
Q  6 aagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgca-agtgtgagttatatgtcccacatcggat 103  Q
    |||||||||  ||||| ||||||||||||| || |||||||||||||||||||  ||||||||| | || | ||||||| ||||||||||||| ||||||    
T  18373157 aagagcttccccttgatgggggagcacgataaagtgatggactcacacttgagatggagtgttgttgtgtacagtgtgatttatatgtcccacttcggat 18373058  T
Q  104 aaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagag 176  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||| |||||||   ||||||||||||||||    
T  18373057 aaaatagtaaaggttgaacaccttataaataagaggactcataaactcattgcc---aggttttgggtaagag 18372988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 1014411 - 1014286
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| | || |||||| |    
T  1014411 tgttggtttgcaagtgtgagttatatgtcatacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccgtaaactcgttaccttaaag 1014312  T
Q  164 ttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||| | ||||||||    
T  1014311 ttttgggtaagagtgtggtgtctctc 1014286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 178
Target Start/End: Complemental strand, 9482829 - 9482656
Alignment:
Q  2 aagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgg 101  Q
    ||||||||||||| |||||| |||| ||||  ||||||| |||||||||  |||||||||||||||| | || |   ||||||||||||| |||||| ||    
T  9482829 aagtaagagcttccgcttgaagggg-gcacagtgaattgttggactcac--ttgagggggagtgttgttgtgtacaagtgagttatatgttccacatggg 9482733  T
Q  102 ataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||  ||||||||    
T  9482732 ataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgcctaaagattttgtataagagtg 9482656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 18371881 - 18371713
Alignment:
Q  6 aagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggata 104  Q
    ||||||||| |||||| ||||| ||||||| || ||||||||||||||||||||||||||| || | || |   |||||||||||||| |||||||||||    
T  18371881 aagagcttccgcttgaagggggggcacgataaagtgatggactcacacttgagggggagtgctgttgtgtagaagtgagttatatgtcacacatcggata 18371782  T
Q  105 aaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||||||||||||||     ||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  18371781 aaatagtaaaggttgaaca----ttaagtaagaagacccataaaccca-tgccttaaggttttgggtaagagtg 18371713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 20870741 - 20870614
Alignment:
Q  64 tgttggtttgcaagtgtgagttatat--gtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 161  Q
    ||||||||||||||||||||||||||  || ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  20870741 tgttggtttgcaagtgtgagttatatatgttccacatcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccactgccttaa 20870642  T
Q  162 ggttttgggtaagagtgcgatgtctctc 189  Q
    | |||||| |||||||| | ||||||||    
T  20870641 gattttggataagagtgtggtgtctctc 20870614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 189
Target Start/End: Original strand, 147757 - 147937
Alignment:
Q  2 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacat 98  Q
    ||||||||||||| |||| | ||||||||  |||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||    
T  147757 aagtaagagcttccgcttaaagggggagct-gatgaattgatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacat 147855  T
Q  99 cggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    | ||||||| |||||| |||||||| | ||||         ||||||||||| ||||||||||||||||||||||||||| | ||||||||    
T  147856 ctgataaaaaagtaaatgttgaacaacatata---------acccataaacctattgccttaaggttttgggtaagagtgtggtgtctctc 147937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 33113523 - 33113408
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  33113523 caagtttgagttatatgtcctacatcggataaaatagtaaaggttgaacgtcttataagtaagaggacccataaactcattgccttaagattttgggtaa 33113424  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| | ||||||||    
T  33113423 gagtgtggtgtctctc 33113408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 45122068 - 45121962
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||| ||||||||    
T  45122068 tgcaagtgtgagttatatgtcccacatcgcataaaatagtaaaggttgaacactttataagtaagaggactcataaactcattgccttaagattttgggt 45121969  T
Q  172 aagagtg 178  Q
    || ||||    
T  45121968 aacagtg 45121962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 25561972 - 25561867
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggtttt-gggta 172  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  25561972 caagtgtgagttatatgtcccacatcggataaaagagtaaacgttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttggggta 25561873  T
Q  173 agagtg 178  Q
    ||||||    
T  25561872 agagtg 25561867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 79 - 178
Target Start/End: Complemental strand, 70425 - 70326
Alignment:
Q  79 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  70425 gtgagttatatgtcccacatcggataaaagagtaaatgttgaacatcttataagtaagaggacccataaacccactgccttaaggttttaggtaagagtg 70326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 5420651 - 5420766
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||  ||    
T  5420651 tgcaagtgtgtattatatgtcccacatcggatagaatagtaaaggttgaacatcttataagtaagaggactcataaacccattgccttaaggttttttgt 5420750  T
Q  172 aagagtgcgatgtctc 187  Q
    ||||||| || |||||    
T  5420751 aagagtgtgacgtctc 5420766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 72 - 178
Target Start/End: Original strand, 9608745 - 9608851
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||    
T  9608745 tgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccataaacccatcaccttaaggttttgggt 9608844  T
Q  172 aagagtg 178  Q
    | |||||    
T  9608845 atgagtg 9608851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 1514071 - 1513967
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||    
T  1514071 caagtatgagttatatatcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccttaaacccataaccttaaggttttgggtaa 1513972  T
Q  174 gagtg 178  Q
     ||||    
T  1513971 aagtg 1513967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 37544646 - 37544542
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  37544646 caagtgtgagttataagtcgcacatcggataaaatagtaaaggttgaacacattataagaaagaggacccataaatccattactttaaggttttgggtaa 37544547  T
Q  174 gagtg 178  Q
    |||||    
T  37544546 gagtg 37544542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 9483320 - 9483229
Alignment:
Q  97 atcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 188  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  9483320 atcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctct 9483229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 40579670 - 40579548
Alignment:
Q  66 ttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggtt 165  Q
    ||||||| ||||||||| ||||||||  || || ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||    
T  40579670 ttggtttccaagtgtgaattatatgtttcatattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacttattgctttaaggtt 40579571  T
Q  166 ttgggtaagagtgcgatgtctct 188  Q
    || |||||||||| | |||||||    
T  40579570 ttaggtaagagtgtggtgtctct 40579548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 178
Target Start/End: Complemental strand, 18372142 - 18372046
Alignment:
Q  82 agttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||    
T  18372142 agttatatgtaccacatccaataaaatagtaaaggttgaacaccttataagtaagaggatccataaactcattgctttaaggttttgggtaagagtg 18372046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 41972158 - 41972254
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttg 168  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| | ||||||||||||||||||||| ||| ||||||    
T  41972158 tgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgataggacccataaacccattgccataaagttttg 41972254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 189
Target Start/End: Complemental strand, 4154506 - 4154322
Alignment:
Q  6 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccacatcgga 102  Q
    |||||||||||||||||||| ||||| || |  |||||||||||||||||||||||||   ||||| | ||||| |||||||||||||||| ||||| ||    
T  4154506 aagagcttctgcttgaggggtgagcatgaagttttgatggactcacacttgagggggaaattgttg-tgtgcaaatgtgagttatatgtcctacatcaga 4154408  T
Q  103 taaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    || || |||  ||||||||||| |||||||| |||| |||||||||| |||||||||||  ||||||||||| ||| ||||||||||    
T  4154407 tagaaaagtggaggttgaacactttataagtgagag-acccataaactcattgccttaatattttgggtaagtgtgtgatgtctctc 4154322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 6877021 - 6876914
Alignment:
Q  72 tgcaagtgtgagttatat-gtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttggg 170  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| || ||||| |||| |||||||||    
T  6877021 tgcaagtgtgagttatatagtcccacatcggataaaaaagtaaaggttgaacaccttataaataagatgacccatacactcattgtcttagggttttggg 6876922  T
Q  171 taagagtg 178  Q
    ||||||||    
T  6876921 taagagtg 6876914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 18372580 - 18372485
Alignment:
Q  21 agggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaagg 116  Q
    ||||| |||||||| || |||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||    
T  18372580 aggggaagcacgataaagtgatggactcacacttgagggggagtgttgttgtgaaagtgtgagttatatgtcccacatcggataaaatagtaaagg 18372485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 40518071 - 40518177
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaata--gtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||| |||||| |||||||| |  ||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  40518071 caagtgtgagttatatgttccacattggataaaaaaaagtaaaggttgaacaccttataagtaaatggacccataaacccaatgccttaaggttttgggt 40518170  T
Q  172 aagagtg 178  Q
    |||||||    
T  40518171 aagagtg 40518177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 64 - 150
Target Start/End: Complemental strand, 41416335 - 41416251
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacc 150  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41416335 tgttggtttgcaagtg--agttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacc 41416251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 76 - 178
Target Start/End: Complemental strand, 18380171 - 18380069
Alignment:
Q  76 agtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaga 175  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| || || ||||||||| | ||||||||||||| ||||||    
T  18380171 agtgtgagttatatatcccacatcgaataaaatagtaaaggttgaacaccttataagtaagggggcctataaacccactaccttaaggttttgagtaaga 18380072  T
Q  176 gtg 178  Q
    |||    
T  18380071 gtg 18380069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 72 - 177
Target Start/End: Original strand, 9308977 - 9309084
Alignment:
Q  72 tgcaagtgtgagttatatgtcc--cacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgg 169  Q
    ||||||||||||||||||||||  |||||| ||||||| |||||| ||||||||  ||||||||||||||||||||||||||||||||| ||||||||||    
T  9308977 tgcaagtgtgagttatatgtcctacacatcagataaaagagtaaaagttgaacatgttataagtaagaggacccataaacccattgcctaaaggttttgg 9309076  T
Q  170 gtaagagt 177  Q
    | ||||||    
T  9309077 gcaagagt 9309084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 8794113 - 8794228
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||||||||||||||| |||||||||||||| | |||| |||||||| ||||||||||||||||| |||||||| | |  ||||||||||||||| |    
T  8794113 caagtgtgagttatatgtctcacatcggataaaagaataaatgttgaacatcttataagtaagaggactcataaacctaatatcttaaggttttgggtga 8794212  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||||| ||||||||    
T  8794213 gagtgcggtgtctctc 8794228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 32305478 - 32305583
Alignment:
Q  66 ttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggtt 165  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||| ||    
T  32305478 ttggtttgcaagtgtgagttatatgtc-------ggataaaatagtaaaggttgaacaccttataagtaagaagacctataaacccattaccttaagatt 32305570  T
Q  166 ttgggtaagagtg 178  Q
    |||| ||||||||    
T  32305571 ttggataagagtg 32305583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 189
Target Start/End: Original strand, 6651476 - 6651611
Alignment:
Q  43 ggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacc 142  Q
    ||||||||||||||||||  |||||| ||||||||||  ||||||||||| |||||||||||||||||||||||||||         || |||||| |||    
T  6651476 ggactcacacttgaggggaggtgttgttttgcaagtg--agttatatgtctcacatcggataaaatagtaaaggttga---------aaataagagaacc 6651564  T
Q  143 cataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||  |||||||||||||||||||||||||||| | ||||||||    
T  6651565 cataaattcattgccttaaggttttgggtaagagtgtggtgtctctc 6651611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 75 - 178
Target Start/End: Complemental strand, 32640682 - 32640584
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaag 174  Q
    ||||||||||||| |||| |||||||||||||| |||||||||||||||     || ||||||||||| |||||||||||||||||||||||||||||||    
T  32640682 aagtgtgagttatctgtctcacatcggataaaagagtaaaggttgaaca-----taggtaagaggaccgataaacccattgccttaaggttttgggtaag 32640588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 75 - 178
Target Start/End: Complemental strand, 43274934 - 43274831
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaag 174  Q
    |||||||||||||||||  |||||| ||||||| ||||||||||||| |  ||||||||||||||||||||||||| |||| |||||||||||| |||||    
T  43274934 aagtgtgagttatatgtttcacatcagataaaagagtaaaggttgaatatattataagtaagaggacccataaacctattgtcttaaggttttgagtaag 43274835  T
Q  175 agtg 178  Q
    ||||    
T  43274834 agtg 43274831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 4154824 - 4154718
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||||||||| |||| || |||  ||||||||||| |||||||| | ||||||||||||| |||||||  ||||||||||||    
T  4154824 tgcaagtgtgagttatatgtcccacatctgatagaaaagtggaggttgaacactttataagtgaaaggacccataaactcattgccccaaggttttgggt 4154725  T
Q  172 aagagtg 178  Q
    |||||||    
T  4154724 aagagtg 4154718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 18372758 - 18372658
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||||| |||||||| |||  |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||   |||||||||||||    
T  18372758 caagtgtgatttatatgttccatttcggataaaatagtaaaggttgaaca-cttataagtaagaggactcataaacccattgcc---aggttttgggtaa 18372663  T
Q  174 gagtg 178  Q
    |||||    
T  18372662 gagtg 18372658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 162
Target Start/End: Complemental strand, 3037865 - 3037776
Alignment:
Q  75 aagtgtgagttatat--gtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag 162  Q
    |||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||    
T  3037865 aagtgtgagttatatatgttccacatcggatgaaatagtaaatgttgaacaccttataagtaagaggactcataaacccattgtcttaag 3037776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 178
Target Start/End: Original strand, 9507777 - 9507888
Alignment:
Q  72 tgcaagtgtgagttatatgtcc--cacatcggataaaat---agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttt 166  Q
    |||||||||||||||||| |||  || || ||||||||    ||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||    
T  9507777 tgcaagtgtgagttatatctcctccatattggataaaagtacagtaaaggttgaataccttataagtaagaggactcataaacccattaccttaaggttt 9507876  T
Q  167 tgggtaagagtg 178  Q
    ||||||||||||    
T  9507877 tgggtaagagtg 9507888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 5915872 - 5915984
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||| |||| ||||||||  ||||| ||| ||||| |||    ||||||||||||||||| |||||||||||||||||||||    
T  5915872 tgcaagtgtgagttatatgtcctacattggataaaaatgtaaa-gtttaacacttta----taagaggacccataaactcattgccttaaggttttgggt 5915966  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  5915967 aagagtgtggtgtctctc 5915984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 25561792 - 25561729
Alignment:
Q  82 agttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccat 145  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  25561792 agttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagagtacccat 25561729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 77 - 177
Target Start/End: Original strand, 20130454 - 20130553
Alignment:
Q  77 gtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagag 176  Q
    ||||||| |||||||| |||||||||||||| |||||| |||||||||||| ||||||||| || ||||||||||||  ||||| |||||| ||||||||    
T  20130454 gtgtgagatatatgtctcacatcggataaaagagtaaaagttgaacacctt-taagtaagatgatccataaacccataaccttacggttttaggtaagag 20130552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 178
Target Start/End: Original strand, 9609108 - 9609191
Alignment:
Q  95 acatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||| |||| || ||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| ||||| ||||||||||    
T  9609108 acatcagatagaaaagtaaaggttgaacatcttataagtaagatgacccataaacccatcgccttaatgttttcggtaagagtg 9609191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 76 - 175
Target Start/End: Complemental strand, 43398225 - 43398123
Alignment:
Q  76 agtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaa---gaggacccataaacccattgccttaaggttttgggta 172  Q
    |||||||||||||| || || |||||||| || ||||||||||||||||||||||| |||   |||||||||||||  ||||||||||| ||||||| ||    
T  43398225 agtgtgagttatatatctcatatcggatagaaaagtaaaggttgaacaccttataaataagaggaggacccataaattcattgccttaaagttttggata 43398126  T
Q  173 aga 175  Q
    |||    
T  43398125 aga 43398123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 167
Target Start/End: Complemental strand, 9620834 - 9620739
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggtttt 167  Q
    ||||||||||||||||||||| |||| | |||| || |||| | ||||| ||| |||||||| ||||||||||||||| |||||||||||| ||||    
T  9620834 tgcaagtgtgagttatatgtctcacaacagatagaaaagtagaagttgatcactttataagtgagaggacccataaactcattgccttaagatttt 9620739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 3038157 - 3038099
Alignment:
Q  2 aagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggg 60  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||    
T  3038157 aagtaagagcttccgcttgagggggagctcgatgaattgatggactcacactttagggg 3038099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 5274775 - 5274891
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||| |||||||||||| | |||| | |||||| || | ||||||||||| |||||| |  || ||||||||||  |||||||||||| ||||| ||    
T  5274775 tgcaagtatgagttatatgttctacattgaataaaaaaggagaggttgaacactttataaatgggaagacccataaaatcattgccttaagattttgagt 5274874  T
Q  172 aagagtgcgatgtctct 188  Q
    ||||||| |||||||||    
T  5274875 aagagtgtgatgtctct 5274891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 18373292 - 18373236
Alignment:
Q  108 tagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggt 164  Q
    |||||||||||||||||||||||| |||||||| |||| ||||||||| ||||||||    
T  18373292 tagtaaaggttgaacaccttataaataagaggatccattaacccattgtcttaaggt 18373236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 171
Target Start/End: Original strand, 40991756 - 40991852
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||| | ||||||||| |  || || |||  ||||||||||| | |||||| |||||||||||||||||| ||||| ||||||||||||    
T  40991756 aagtgtgagttagaagtcccacattgcttagaaaagtggaggttgaacacttcataagtgagaggacccataaacccaatgcctcaaggttttgggt 40991852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 178
Target Start/End: Original strand, 12283873 - 12283978
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||| ||||||||||||||| || ||||||| |||||| |||||| | |||| |||||| | ||| ||||||| ||  | ||||||||||||| |    
T  12283873 tgcaagtgtaagttatatgtcccacgtcagataaaaaagtaaatgttgaatatcttaaaagtaaaatgacacataaactca-agtcttaaggttttggat 12283971  T
Q  172 aagagtg 178  Q
    |||||||    
T  12283972 aagagtg 12283978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 43274777 - 43274699
Alignment:
Q  22 gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacat 98  Q
    ||||||||||||| || |||||||||||||||||||||  |||||||  || | |||||||||||||||| || |||||    
T  43274777 gggggagcacgataaagtgatggactcacacttgagggacagtgttgttgtgtacaagtgtgagttatatatctcacat 43274699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 12156745 - 12156704
Alignment:
Q  143 cataaacccattgccttaaggttttgggtaagagtgcgatgt 184  Q
    ||||||||||||| |||||||||||||||||||||| |||||    
T  12156745 cataaacccattgtcttaaggttttgggtaagagtgtgatgt 12156704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 20995559 - 20995502
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttat 129  Q
    ||||||||||||||||||||| |||||| ||||||| |||  ||||||||||| ||||    
T  20995559 tgcaagtgtgagttatatgtctcacatcagataaaaaagtggaggttgaacactttat 20995502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 33831978 - 33832055
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 149  Q
    ||||||||||||||||||||| ||| | | | | || |||| | ||||||||| ||||||||||||||||| ||||||    
T  33831978 tgcaagtgtgagttatatgtctcacgttgaagagaaaagtagaagttgaacactttataagtaagaggacctataaac 33832055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 11442911 - 11442952
Alignment:
Q  130 aagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||| ||||||||||||||| || ||||||||||||||||||    
T  11442911 aagtgagaggacccataaactcaatgccttaaggttttgggt 11442952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 104
Target Start/End: Complemental strand, 18645745 - 18645713
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggata 104  Q
    ||||||||||||||||||||| |||||||||||    
T  18645745 tgcaagtgtgagttatatgtctcacatcggata 18645713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 20995497 - 20995457
Alignment:
Q  149 cccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||||||||||||||| || | ||||||||    
T  20995497 cccattgccttaaggttttgggtaagaatgtggtgtctctc 20995457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 5542855 - 5542666
Alignment:
Q  1 aaagtaagagcttctgcttgaggggga-gcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 99  Q
    ||||| |||||||| |||||| ||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  5542855 aaagttagagcttccgcttgaaggggaagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccatatc 5542756  T
Q  100 ggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| | ||||||||    
T  5542755 gaataaaatagtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaaggtttttggtaagagtgtggtgtctctc 5542666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 40 - 178
Target Start/End: Original strand, 37106156 - 37106294
Alignment:
Q  40 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagagg 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37106156 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagagg 37106255  T
Q  140 acccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  37106256 acccataaacccatttccttaaggttttgggtaagagtg 37106294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 14745523 - 14745346
Alignment:
Q  1 aaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 99  Q
    |||||||||||||| |||||| ||||||||| ||||||| |||| ||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  14745523 aaagtaagagcttccgcttgaagggggagcatgatgaatagatgtactcaaacttgagggg-agtgttggtttgcaactgtgagttatatgtcccacatc 14745425  T
Q  100 ggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    | |||||||||||| ||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14745424 gaataaaatagtaatggttgaacatcttgtaagtatgaggacccataaacccattgccttaaggttttgggtaagagtg 14745346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 40679852 - 40679681
Alignment:
Q  6 aagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataa 105  Q
    ||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| | ||||| |||||||||||||||||| ||||||||     
T  40679852 aagagcttccgcttgagggggagcatgatgaatagatggactcacacttgagggggagtgttg-tgtgcaaatgtgagttatatgtcccatatcggatag 40679754  T
Q  106 aatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    || ||||| |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  40679753 aaaagtaagggttgaacaccttataagtaagagaacccataaacccatcgccttaagattttgggtaagagtg 40679681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 39 - 178
Target Start/End: Complemental strand, 36178460 - 36178321
Alignment:
Q  39 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 138  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |    
T  36178460 tgatggactcacacttgagggggactgttggtttgcaagtgtgagttatatgtcccacttcggataaaatagtaaaggtggaacaccttataagtaaggg 36178361  T
Q  139 gacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||| ||||||||||||| ||||||||||||||||||||||    
T  36178360 gactcataaacccattgtcttaaggttttgggtaagagtg 36178321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 63 - 189
Target Start/End: Complemental strand, 36178772 - 36178646
Alignment:
Q  63 gtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag 162  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36178772 gtgttagtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag 36178673  T
Q  163 gttttgggtaagagtgcgatgtctctc 189  Q
    |||||||||||||||| | ||||||||    
T  36178672 gttttgggtaagagtgtggtgtctctc 36178646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 64 - 178
Target Start/End: Complemental strand, 14745833 - 14745719
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14745833 tgttggtttgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 14745734  T
Q  164 ttttgggtaagagtg 178  Q
    |||||||||||||||    
T  14745733 ttttgggtaagagtg 14745719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 24 - 178
Target Start/End: Complemental strand, 28531519 - 28531366
Alignment:
Q  24 gggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 123  Q
    ||||||| |||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  28531519 gggagcatgatgaactgatggactcacacttgagggggagtgttg-tgtgcaagtgtgagttatatgtcccacatcggatagaaaagcaaaggttgaaca 28531421  T
Q  124 ccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||||||||||| ||||||||| |||||||||||| |||||||||||||||    
T  28531420 ccttataagtaagaggtcccataaactcattgccttaagattttgggtaagagtg 28531366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 6 - 147
Target Start/End: Original strand, 7598543 - 7598684
Alignment:
Q  6 aagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataa 105  Q
    ||||||||| |||||| |||| ||| ||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||    
T  7598543 aagagcttccgcttgaaggggggcatgatgaatagatggactcacacttgagagggagtgttggtgtgcaagtgtgagttatatgtcccacatcagataa 7598642  T
Q  106 aatagtaaaggttgaacaccttataagtaagaggacccataa 147  Q
    || |||||||||||||||||||||||||||||||||||||||    
T  7598643 aaaagtaaaggttgaacaccttataagtaagaggacccataa 7598684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 62 - 188
Target Start/End: Complemental strand, 5543166 - 5543040
Alignment:
Q  62 agtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 161  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  5543166 agtgttggtttgcaagtgtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggatccataaacctattgccttaa 5543067  T
Q  162 ggttttgggtaagagtgcgatgtctct 188  Q
    | ||||||||||||||| | |||||||    
T  5543066 gattttgggtaagagtgtggtgtctct 5543040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 36785793 - 36785664
Alignment:
Q  2 aagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatc 99  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||  || ||||||||||||||||||||||||||||    
T  36785793 aagtaagagcttccgcttgagggggagcatgatgaattgatggactcacactttagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatc 36785694  T
Q  100 ggataaaatagtaaaggttgaacaccttat 129  Q
    ||||||||||||||||||||||||||||||    
T  36785693 ggataaaatagtaaaggttgaacaccttat 36785664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 64 - 178
Target Start/End: Complemental strand, 41283641 - 41283527
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41283641 tgttggtttgcaagtgtgagttatatgtcccatatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaagg 41283542  T
Q  164 ttttgggtaagagtg 178  Q
    |||| ||||||||||    
T  41283541 ttttaggtaagagtg 41283527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 44 - 178
Target Start/End: Original strand, 15880233 - 15880369
Alignment:
Q  44 gactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 141  Q
    ||||||||||| ||||| ||||||| | ||  |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15880233 gactcacacttaaggggaagtgttgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagaggac 15880332  T
Q  142 ccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||||||||||||||||||||||||||||||||    
T  15880333 ccataaacccattgccttaaggttttgggtaagagtg 15880369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 37105920 - 37106041
Alignment:
Q  68 ggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggtttt 167  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||    
T  37105920 ggtttgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacaccttataagtaaggggacccataaactcattgccttaagatttt 37106019  T
Q  168 gggtaagagtgcgatgtctctc 189  Q
    ||||||||||| | ||||||||    
T  37106020 gggtaagagtgtggtgtctctc 37106041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 6421387 - 6421502
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||    
T  6421387 caagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttgaggttttgggtaa 6421486  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| | ||||||||    
T  6421487 gagtgtggtgtctctc 6421502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 29 - 189
Target Start/End: Original strand, 40733472 - 40733634
Alignment:
Q  29 cacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacct 126  Q
    |||||||||||||| ||||||||||||||||| ||||||  | ||  |||||||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  40733472 cacgatgaattgatagactcacacttgaggggaagtgttattgtgtacaagtgtgagttatatgtcccacatcagataaaaaagtaaatgttgaacacct 40733571  T
Q  127 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||||||||||||||||||| |   |||||| |||||||||||||||| | ||||||||    
T  40733572 tataagtaagaggacccataaacctacaaccttaaagttttgggtaagagtgtggtgtctctc 40733634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 72 - 178
Target Start/End: Original strand, 962598 - 962704
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  962598 tgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgagaggacccataaacccattgtcttaaggttttgggt 962697  T
Q  172 aagagtg 178  Q
    |||||||    
T  962698 aagagtg 962704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 6422066 - 6422227
Alignment:
Q  21 agggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttga 120  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||| | ||||| |||||      ||||||||||| ||||||| ||||||||||||    
T  6422066 agggggagcatgatgaattgatggactcacacttgagggggagtcttg-tgtgcaaatgtga------tgtcccacatcagataaaaaagtaaaggttga 6422158  T
Q  121 acaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||| | ||||||||    
T  6422159 acacattataattaagaggacccataaacccatagccttaaggttttaggtaagagtgtggtgtctctc 6422227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 38796450 - 38796298
Alignment:
Q  2 aagtaagagcttctgcttga-gggggagcacgatgaatt-gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccaca 97  Q
    |||||||| |||| |||||| ||||||||| ||||||   |||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||    
T  38796450 aagtaagatcttccgcttgaagggggagcatgatgaaaaagatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccaca 38796351  T
Q  98 tcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacc 150  Q
    |||||||||| |||||| ||||||||||||||||||||||||||| |||||||    
T  38796350 tcggataaaacagtaaatgttgaacaccttataagtaagaggacctataaacc 38796298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 178
Target Start/End: Original strand, 40733813 - 40733988
Alignment:
Q  5 taagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcgg 101  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||  | ||  |||||||||||||||||||||||||||     
T  40733813 taagagcttccgcttgaagggggagcatgatgaattgatggactcacacttgagggggagtgttattgtgtacaagtgtgagttatatgtcccacatcga 40733912  T
Q  102 ataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||| ||||||| || |||||||||||||||||||| | ||| |||| |  ||||||| ||||||||||||||||    
T  40733913 ataaaagagtaaagatttaacaccttataagtaagagggctcat-aacctacagccttaaagttttgggtaagagtg 40733988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 189
Target Start/End: Original strand, 29676851 - 29677025
Alignment:
Q  22 gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttg 119  Q
    ||||||||||||| || ||||||||||||||||||||||| ||||||  || |||| ||||||||||||||||||||||||||||||| ||||||||||     
T  29676851 gggggagcacgataaagtgatggactcacacttgagggggtgtgttgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggttt 29676950  T
Q  120 aacaccttataagtaagag-----gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||| || ||||     ||||||||||||||||||||||||| |||  ||||||||| | ||||||||    
T  29676951 aacaccttataggtgagaggagaagacccataaacccattgccttaaggctttaagtaagagtgtggtgtctctc 29677025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 76 - 189
Target Start/End: Complemental strand, 28254391 - 28254278
Alignment:
Q  76 agtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaga 175  Q
    ||||||| ||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28254391 agtgtgacttatatgtcccacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaactcattgccttaaggttttgggtaaga 28254292  T
Q  176 gtgcgatgtctctc 189  Q
    ||| | ||||||||    
T  28254291 gtgtggtgtctctc 28254278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 52 - 183
Target Start/End: Complemental strand, 31468926 - 31468797
Alignment:
Q  52 cttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 149  Q
    |||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    |||||||||||||||||    
T  31468926 cttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaatatctta----taagaggacccataaac 31468831  T
Q  150 ccattgccttaaggttttgggtaagagtgcgatg 183  Q
     |||||||||||||||||||||||||||| ||||    
T  31468830 tcattgccttaaggttttgggtaagagtgtgatg 31468797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 35580881 - 35580765
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  35580881 tgcaagtgtgagttatatgtcccacatcggataaaacaataaatgttgaacaccttataagtgagagga-ccataaacccattgccttaaggttttgggt 35580783  T
Q  172 aagagtgcgatgtctctc 189  Q
    |||||||||  |||||||    
T  35580782 aagagtgcggcgtctctc 35580765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 177
Target Start/End: Complemental strand, 38796778 - 38796673
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  38796778 tgcaagtgtgagttatatgtcccacatctgataaaacaataaaggttgaacaccttataagtaagaggacccataaacctaatgccttaaggttttgggt 38796679  T
Q  172 aagagt 177  Q
    ||||||    
T  38796678 aagagt 38796673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 6712978 - 6713094
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg-ttttgggta 172  Q
    ||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||    
T  6712978 caagtgtgagttatatgtctcacatcggataaaacagtaaatgttgaacaccttataagtaagaggacccataaacctattgctttaaggtttttgggta 6713077  T
Q  173 agagtgcgatgtctctc 189  Q
    |||||| ||||||||||    
T  6713078 agagtgtgatgtctctc 6713094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 178
Target Start/End: Original strand, 42514649 - 42514755
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  42514649 tgcaagtgtgagttatatgtcctacatcagatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccatcgccttaagattttgggt 42514748  T
Q  172 aagagtg 178  Q
    |||||||    
T  42514749 aagagtg 42514755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 193
Target Start/End: Original strand, 30323396 - 30323585
Alignment:
Q  6 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccacatcgga 102  Q
    |||||| || |||||||||  ||||| ||||||||||||||||||||||||||||||||  ||||| | |||||||||| ||||||||||||| ||| ||    
T  30323396 aagagcatccgcttgagggatgagcatgatgaattgatggactcacacttgagggggagattgttg-tgtgcaagtgtgtgttatatgtcccaaatcaga 30323494  T
Q  103 taaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcattt 193  Q
    || || | |  ||||||||||| ||| |||| |||||||| |||||| |||||||||||||||||||||||||||| |  |||||||||||    
T  30323495 tagaaaattggaggttgaacactttagaagtgagaggacctataaactcattgccttaaggttttgggtaagagtgtggcgtctctcattt 30323585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 189
Target Start/End: Complemental strand, 33561658 - 33561492
Alignment:
Q  22 gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 121  Q
    |||||||  |||||||||||||||| | ||||||| ||||| ||||| | |||||||||||||||||||| ||||||| |||| || |||  ||||| ||    
T  33561658 gggggagtgcgatgaattgatggacacgcacttgatggggaatgttg-tgtgcaagtgtgagttatatgttccacatcagatagaaaagtggaggttaaa 33561560  T
Q  122 caccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||| |||||||| ||||||||||||||| ||||| |||||||||||||||||||||| ||| ||||||    
T  33561559 cactttataagtgagaggacccataaactcattgtcttaaggttttgggtaagagtgtgatatctctc 33561492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 79 - 189
Target Start/End: Complemental strand, 15511646 - 15511536
Alignment:
Q  79 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||||||||| |||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  15511646 gtgagttatatgtcacacaacggataaaagagtaaaggttgaacacgttataagtaagaggacccataaacccattgtcttaagattttgggtaagagtg 15511547  T
Q  179 cgatgtctctc 189  Q
     | ||||||||    
T  15511546 tggtgtctctc 15511536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 72 - 178
Target Start/End: Original strand, 16542449 - 16542555
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||| |||||||||||| ||||| ||    
T  16542449 tgcaagtgtgagttataagtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacttataaactcattgccttaagattttgagt 16542548  T
Q  172 aagagtg 178  Q
    |||||||    
T  16542549 aagagtg 16542555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 30313110 - 30313283
Alignment:
Q  6 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccacatcgga 102  Q
    ||||||||| |||||||||| ||||| ||||||||| ||||||||||||||||||| ||  ||||| | |||||| ||| |||||||||| |||||||||    
T  30313110 aagagcttccgcttgaggggtgagcatgatgaattgttggactcacacttgaggggaagattgttg-tgtgcaagcgtgtgttatatgtctcacatcgga 30313208  T
Q  103 taaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    || || |||  ||||||||||| |||||||| |||||||||| |||| |||||||||||| |||||||||||||||    
T  30313209 tagaaaagtggaggttgaacac-ttataagtgagaggacccaaaaactcattgccttaagattttgggtaagagtg 30313283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 77 - 177
Target Start/End: Original strand, 33731653 - 33731753
Alignment:
Q  77 gtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagag 176  Q
    ||||||||||||| || |||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  33731653 gtgtgagttatatatctcacatcggataaaagagtaaaggttgagcaccttataagtaagaggatccataaacctattgccttaaggttttgggtaagag 33731752  T
Q  177 t 177  Q
    |    
T  33731753 t 33731753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 36006035 - 36005932
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||||||||||||||||||||||| ||| || |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  36006035 caagtgtgagttatatgtcccacatcgaatagaa-agtaaaagttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaa 36005937  T
Q  174 gagtg 178  Q
     ||||    
T  36005936 aagtg 36005932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 36178311 - 36178223
Alignment:
Q  90 gtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||    
T  36178311 gtcccacatcggataaaatagtaaaggttgaacaccttataagtaagggaacccataaacccattgccttaagattttgggtaagagtg 36178223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 37632755 - 37632649
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||  |||  ||||||||||||||||||||||||||||  | ||||||||||||||    
T  37632755 tgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggtttgacattttataagtaagaggacccataaacccataactttaaggttttgggt 37632656  T
Q  172 aagagtg 178  Q
    |||||||    
T  37632655 aagagtg 37632649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 75 - 160
Target Start/End: Complemental strand, 31899581 - 31899496
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgcctta 160  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  31899581 aagtgtgagttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaactcattgcctta 31899496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 42514943 - 42515078
Alignment:
Q  2 aagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagtta----tatgtcccaca 97  Q
    ||||||||||||| ||||||| ||||||| ||||||| |||||||||||| ||||||||||||||| || |||| ||||||||||    |||||||||||    
T  42514943 aagtaagagcttccgcttgagagggagcatgatgaatagatggactcacatttgagggggagtgtt-gtgtgcaggtgtgagttatatgtatgtcccaca 42515041  T
Q  98 tcggataaaatagtaaaggttgaacaccttataagta 134  Q
    ||||||| || |||||||||| |||||||||||||||    
T  42515042 tcggatagaaaagtaaaggttaaacaccttataagta 42515078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 33953994 - 33953823
Alignment:
Q  6 aagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataa 105  Q
    |||||||||  ||||||||||||||||||||||| |   |||||   |||||||||||||||| | ||||| ||||||||||| |||||||||| ||||     
T  33953994 aagagcttcctcttgagggggagcacgatgaattaacatactcaattttgagggggagtgttg-tgtgcaaatgtgagttataagtcccacatcagatag 33953896  T
Q  106 aatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    || |||  |||||||||||  ||||||| ||||||||||||||||  |||||||||  |||||||||||||||    
T  33953895 aaaagtggaggttgaacactatataagtgagaggacccataaacctgttgccttaaaattttgggtaagagtg 33953823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 41678593 - 41678420
Alignment:
Q  6 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagt--tatatgtcccacatcgga 102  Q
    ||||||||| |||||||| | |||||  |||||||||||||||||||||||| |||||||||| || |||||||||||||  |||||||| |||||| ||    
T  41678593 aagagcttccgcttgaggagagagcattatgaattgatggactcacacttgaaggggagtgtt-gtgtgcaagtgtgagttatatatgtctcacatcaga 41678495  T
Q  103 taaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    || || ||   ||||| ||||| |||||||| |||||||||||||| || |||||||||||||||| |||||||||    
T  41678494 tagaaaaggggaggttaaacactttataagtgagaggacccataaa-cctttgccttaaggttttgagtaagagtg 41678420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 1769884 - 1769969
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 149  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||| |||||||    
T  1769884 tgttggtgtgcaagtgtgagttatatgtcacacatcggataaaagagtaaaagttgaacaccttataagtaagaggactcataaac 1769969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 3673011 - 3673185
Alignment:
Q  1 aaagtaagagcttctgcttgagg-gggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccaca 97  Q
    ||||||| |||||| |||||| | ||||||| ||||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||||    
T  3673011 aaagtaaaagcttccgcttgaagagggagcatgatgaattgatggactcacacttgaggaggagtgttgttgtgtgcaagtgtgagttatatgtcccaca 3673110  T
Q  98 tcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    | |||||||||                 ||||||||||||||| |||||||| |||||| ||||| |||||| |||||||| ||||||||||    
T  3673111 ttggataaaat-----------------ttataagtaagaggatccataaactcattgctttaagattttggctaagagtgtgatgtctctc 3673185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 189
Target Start/End: Complemental strand, 29873732 - 29873578
Alignment:
Q  36 aattgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagt 133  Q
    ||||||||||||||||||||||||||||  ||||| | |||||| ||| |||| |||||||||||| |||| || |||  ||||||||||  ||||||||    
T  29873732 aattgatggactcacacttgagggggagattgttg-tgtgcaagggtgtgttacatgtcccacatcagatagaaaagtggaggttgaacattttataagt 29873634  T
Q  134 aagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
      |||||| ||||||| |||||||||||||||||| ||||||||| || |||||||    
T  29873633 gggaggactcataaactcattgccttaaggttttgagtaagagtgtgacgtctctc 29873578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 7598228 - 7598331
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||| |||||||| | |||||| ||| || |||||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||||||||    
T  7598228 tgcaagtgtgaattatatgttctacatcgaatagaaaagtaaaggttcaacaccttataaataagaggacccataaactcatagccttaaggttttgggt 7598327  T
Q  172 aaga 175  Q
    ||||    
T  7598328 aaga 7598331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 178
Target Start/End: Complemental strand, 37894889 - 37894744
Alignment:
Q  32 gatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa 131  Q
    ||||||| |||||||||| |||| ||||||||| ||| | ||||| ||||||||||||||||||||| | ||| || |||||||| | || |||||||||    
T  37894889 gatgaatagatggactcatacttaagggggagtattg-tgtgcaaatgtgagttatatgtcccacattgaatagaaaagtaaaggctaaaaaccttataa 37894791  T
Q  132 gtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||| ||| |||||| ||||||||||||| |||||| ||| ||||    
T  37894790 gtaagaagactcataaatccattgccttaagattttggttaaaagtg 37894744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 178
Target Start/End: Complemental strand, 37895211 - 37895113
Alignment:
Q  80 tgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||||||||||||||||||||||| || | |||| |||||| |||||| |||||| || || ||||||||||||||||||||||||||||||||||||    
T  37895211 tgagttatatgtcccacatcggatagaaaaataaaagttgaaaaccttaaaagtaaaagaacacataaacccattgccttaaggttttgggtaagagtg 37895113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 5367457 - 5367561
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||||  ||||||||||| ||||||||||| || |||||||||||||||||||||||||| || |||| ||| |||  ||||||||||||||||||    
T  5367457 caagtgtgatatatatgtcccagatcggataaaagagcaaaggttgaacaccttataagtaagatgatccatgaacacataaccttaaggttttgggtaa 5367556  T
Q  174 gagtg 178  Q
    |||||    
T  5367557 gagtg 5367561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 23346250 - 23346353
Alignment:
Q  85 tatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgt 184  Q
    |||||||| ||||||| ||| || |||||||||| |||||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||| |||||    
T  23346250 tatatgtctcacatcgtatagaaaagtaaaggttaaacaccttataa-taagagggcccataaacccatagccttaaggttttcggtaagagtgtgatgt 23346348  T
Q  185 ctctc 189  Q
    |||||    
T  23346349 ctctc 23346353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 29874179 - 29874075
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||| ||||||||||||||||| |||| || |||  ||||||||||| |||||| |  |||||||||||||||||||||||||||||||||| |||    
T  29874179 caagtgtgtgttatatgtcccacatcagatagaaaagtggaggttgaacactttataattgggaggacccataaacccattgccttaaggttttggataa 29874080  T
Q  174 gagtg 178  Q
    |||||    
T  29874079 gagtg 29874075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 75 - 178
Target Start/End: Complemental strand, 31259774 - 31259668
Alignment:
Q  75 aagtgtgagttatatgtcccacatc---ggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||| |||||||||||| ||||||   |||||||| |||||||||| |||||||||||||||||| |||||||||||| ||  ||||||||||||||||    
T  31259774 aagtgcgagttatatgtctcacatcatcggataaaagagtaaaggttcaacaccttataagtaagatgacccataaacctatcaccttaaggttttgggt 31259675  T
Q  172 aagagtg 178  Q
    |||||||    
T  31259674 aagagtg 31259668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 167
Target Start/End: Complemental strand, 12529186 - 12529091
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggtttt 167  Q
    |||||||||||||||||||||| |||||  |||||| ||||||| ||||||||| ||||||||||||||| ||||||| ||||||||||| |||||    
T  12529186 tgcaagtgtgagttatatgtcctacatcaaataaaacagtaaagattgaacaccgtataagtaagaggactcataaactcattgccttaaagtttt 12529091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 189
Target Start/End: Complemental strand, 40163520 - 40163413
Alignment:
Q  83 gttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattg-ccttaaggttttgggtaagagtgcga 181  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||| |||| | || | |||||||||||||||| |||| |     
T  40163520 gttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccattaacctagtgtctttaaggttttgggtaaaagtgtgg 40163421  T
Q  182 tgtctctc 189  Q
    ||||||||    
T  40163420 tgtctctc 40163413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 88 - 177
Target Start/End: Complemental strand, 28254254 - 28254165
Alignment:
Q  88 atgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 177  Q
    ||||| ||||||||||| || |||||||||||||||| |||||||||||||||| ||||||| | ||||||||| |||| ||||||||||    
T  28254254 atgtctcacatcggatagaaaagtaaaggttgaacactttataagtaagaggactcataaacactttgccttaaagtttagggtaagagt 28254165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 16590888 - 16590978
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaata-gtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggtttt 167  Q
    ||||||||||||||||||||||||||||  |||||| | ||||||||||||||      |||||||||||||||||||| |||||||||||||||||    
T  16590888 tgcaagtgtgagttatatgtcccacatcaaataaaaaaagtaaaggttgaaca------aagtaagaggacccataaacacattgccttaaggtttt 16590978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 29676543 - 29676622
Alignment:
Q  80 tgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgcctt 159  Q
    ||||||||||||| ||||| |||||||| ||||||| |||||||| |||||||| |||| |||||||||| |||||||||    
T  29676543 tgagttatatgtctcacattggataaaagagtaaagattgaacacattataagtgagagaacccataaactcattgcctt 29676622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 170
Target Start/End: Original strand, 31385738 - 31385835
Alignment:
Q  73 gcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttggg 170  Q
    |||||||||||||| | |||  ||||||| || || | |  ||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  31385738 gcaagtgtgagttagaagtctgacatcggttagaaaaatggaggttgagcaccttataagtgaaaggacccataaacccattgccttaaggttttggg 31385835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 6421793 - 6421848
Alignment:
Q  134 aagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||    
T  6421793 aagaggacccataaacctattgccttaaggttttgggtaagagtgtggtgtctctc 6421848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 178
Target Start/End: Original strand, 9231252 - 9231355
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaag 174  Q
    |||| ||||||||||||| || ||| |||| || |||||||||||||||  |||||| |||||||| |||| ||||||  ||||||| ||||||| ||||    
T  9231252 aagtatgagttatatgtctcatatcagatagaaaagtaaaggttgaacatattataaataagaggatccatcaacccaccgccttaaagttttggttaag 9231351  T
Q  175 agtg 178  Q
    ||||    
T  9231352 agtg 9231355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 178
Target Start/End: Original strand, 12910231 - 12910334
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaag 174  Q
    |||| |||||||||||| |||||||||||  || |||| ||||||||| |||||||||| | | |||  |||||  ||||| ||||||||||||||||||    
T  12910231 aagtttgagttatatgttccacatcggatggaaaagtacaggttgaaccccttataagtgaaatgacttataaattcattgtcttaaggttttgggtaag 12910330  T
Q  175 agtg 178  Q
    ||||    
T  12910331 agtg 12910334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 40734231 - 40734300
Alignment:
Q  27 agcacgatgaattgatggactcacacttgagggggagtgt--tggtttgcaagtgtgagttatatgtccc 94  Q
    ||||||||||||||||||| ||||||||||||||||||||  | || | |||||||||||||||||||||    
T  40734231 agcacgatgaattgatggaatcacacttgagggggagtgttattgtgtacaagtgtgagttatatgtccc 40734300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 6421306 - 6421352
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttga 120  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||    
T  6421306 caagtgtaagttatatgtcccacatcggataaaagagtaaaggttga 6421352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 3594333 - 3594217
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaag 174  Q
    ||||||||||| |||||  |||| || ||| || |||  |||| |||||| |||||||| | |||| |||||||| |||||| ||||| ||||| |||||    
T  3594333 aagtgtgagttgtatgtttcacaacgaatagaaaagtggaggtcgaacactttataagtgataggatccataaacacattgctttaagattttgagtaag 3594234  T
Q  175 agtgcgatgtctctcat 191  Q
    |||| ||| ||||||||    
T  3594233 agtgtgatatctctcat 3594217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 35580534 - 35580494
Alignment:
Q  136 gaggacccataaacccattgccttaaggttttgggtaagag 176  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  35580534 gaggacccataaactcattgccttaaggttttgggtaagag 35580494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 6421688 - 6421743
Alignment:
Q  134 aagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||||| |||| || ||||||||||||||||||| | ||||||||    
T  6421688 aagaggacccataaacctattgactaaaggttttgggtaagagtgtggtgtctctc 6421743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 13792585 - 13792517
Alignment:
Q  139 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggtcctagatgt 209  Q
    ||||| || |||||||| ||| |||||||||||||||||| |||||||||  ||||| |||||||||||||    
T  13792585 gacccgtacacccattgacttgaggttttgggtaagagtgtgatgtctct--tttagcgggtcctagatgt 13792517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 2336666 - 2336723
Alignment:
Q  114 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||| ||||||||    
T  2336666 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 2336723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 3672773 - 3672818
Alignment:
Q  144 ataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||||    
T  3672773 ataaacccattgccttaagattttgggtaagagtgtggtgtctctc 3672818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 34481589 - 34481642
Alignment:
Q  16 gcttgagg-gggagcacgatgaattgatggactcacacttgagggggagtgttg 68  Q
    |||||||| ||||||  |||||||||||||||||||||||||||| ||||||||    
T  34481589 gcttgaggcgggagcgtgatgaattgatggactcacacttgagggagagtgttg 34481642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 36784365 - 36784312
Alignment:
Q  125 cttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||||||||||| ||||||||||||| ||| ||||||||||||| ||| ||||    
T  36784365 cttataagtaagatgacccataaaccctttgtcttaaggttttggataaaagtg 36784312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 30312831 - 30312895
Alignment:
Q  114 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||||||||| |||||| | ||| |||||||||||  ||| |||||||||||||||||| ||||    
T  30312831 aggttgaacactttataacttagatgacccataaacttatttccttaaggttttgggtaaaagtg 30312895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 25390372 - 25390326
Alignment:
Q  126 ttataagtaagaggacccataaacccattgccttaaggttttgggta 172  Q
    |||||| ||||| |||||||||||| |||| ||||||||||||||||    
T  25390372 ttataactaagaagacccataaacctattgtcttaaggttttgggta 25390326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 35580592 - 35580532
Alignment:
Q  25 ggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgag 83  Q
    |||||| ||||||| |||||||||||||||||||| ||||| ||  || ||||||||||||    
T  35580592 ggagcatgatgaatagatggactcacacttgagggagagtgctgttgtgtgcaagtgtgag 35580532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 3672719 - 3672755
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaat 108  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  3672719 tgcaagtatgagttatatgtcccacatcgaataaaat 3672755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 104
Target Start/End: Complemental strand, 33954419 - 33954387
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggata 104  Q
    |||||||||||||||||||||||||||| ||||    
T  33954419 tgcaagtgtgagttatatgtcccacatcagata 33954387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 137; Significance: 1e-71; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 5704 - 5867
Alignment:
Q  1 aaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacat 98  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||| |||||    
T  5704 aaagtaagagcttccgcttgagggggagcaagatgaattgatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcgcacat 5803  T
Q  99 cggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5804 cggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag 5867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 5396 - 5514
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgcctt-aaggttttggg 170  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||| ||| ||| |||||||    
T  5396 tgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagggcccataaacatattgtcttaaagtttttggg 5495  T
Q  171 taagagtgcgatgtctctc 189  Q
    |||||||| | ||||||||    
T  5496 taagagtgtggtgtctctc 5514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 2e-67; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 6500751 - 6500939
Alignment:
Q  1 aaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 99  Q
    ||||||||||||||  ||||| ||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  6500751 aaagtaagagcttccccttgaagggggagcatgatgaatagatggactcacacttgatggggagtgttggtttgcaagtgtgagttatatgtcc-acatc 6500849  T
Q  100 ggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||| |||||||| | ||||||||    
T  6500850 ggataaaatagtaaaggttgaacaccttataaataaaaggacccataaactcattgccttaaggttttggataagagtgtggtgtctctc 6500939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 3 - 189
Target Start/End: Original strand, 624128 - 624313
Alignment:
Q  3 agtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 102  Q
    |||||||||||| |||| | |||||||| ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |    
T  624128 agtaagagcttccgcttaaaggggagcatgatgaatagatgga-tcacacttgaggggaagtgttggtttgcaagtgtgagttatatgtcccacattgta 624226  T
Q  103 taaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||| |||||||||||||||||| | ||||||||    
T  624227 taaaatagtaaaggttgaacacgttataagtaagatgacccataaacccatagccttgaggttttgggtaagagtgtggtgtctctc 624313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 2 - 189
Target Start/End: Complemental strand, 3295246 - 3295056
Alignment:
Q  2 aagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg----gtttgcaagtgtgagttatatgtcccaca 97  Q
    ||||||||||||| |||| |||||||||||||  || ||||||||||||||||||||||||||||||    || ||||||||||||| ||||||||||||    
T  3295246 aagtaagagcttccgcttaagggggagcacgaaaaagtgatggactcacacttgagggggagtgttgttgtgtgtgcaagtgtgagt-atatgtcccaca 3295148  T
Q  98 tcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||| | ||||||||    
T  3295147 tcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaacccattgccttgaggttttgggtatgagtgtggtgtctctc 3295056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 2 - 178
Target Start/End: Complemental strand, 13415990 - 13415812
Alignment:
Q  2 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacat 98  Q
    ||||||||||||| |||||| ||||||||| | ||||| ||||||||||||||||||||| |||| ||  || |||||||||||||||||||||||||||    
T  13415990 aagtaagagcttccgcttgaagggggagcatgctgaatagatggactcacacttgagggg-agtgctgttgtgtgcaagtgtgagttatatgtcccacat 13415892  T
Q  99 cggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  13415891 cggataaattagtaaaggttgaacaccttataagtaagaggacccataaacctattaccttaaggttttgggtaagagtg 13415812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 189
Target Start/End: Original strand, 26074539 - 26074729
Alignment:
Q  2 aagtaagagcttctgcttgaggggg-agcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacat 98  Q
    |||||||||||||  ||||| || | |||| ||| ||||||||||||||||||||||||||||||||  | ||  |||||||||||||||||| ||| ||    
T  26074539 aagtaagagcttccacttgaaggagtagcatgatcaattgatggactcacacttgagggggagtgtttttgtgtacaagtgtgagttatatgttccatat 26074638  T
Q  99 cggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  26074639 cggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctc 26074729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 64 - 178
Target Start/End: Original strand, 32487386 - 32487499
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  32487386 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacc-tataagtaagaggacccataaacccattgccttaagg 32487484  T
Q  164 ttttgggtaagagtg 178  Q
    |||||||||||||||    
T  32487485 ttttgggtaagagtg 32487499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 45 - 189
Target Start/End: Complemental strand, 26074330 - 26074187
Alignment:
Q  45 actcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggaccca 144  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  26074330 actcacacttgagggggagtgttg-tgtgcaagtgtgagttatatgtcacacatcggataaaaaagtaaaggttgaacacctcatatgtaagaggaccca 26074232  T
Q  145 taaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    | |||||||||||||||||||||||||||||||| | ||||||||    
T  26074231 tgaacccattgccttaaggttttgggtaagagtgtggtgtctctc 26074187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 21 - 173
Target Start/End: Complemental strand, 26074993 - 26074839
Alignment:
Q  21 agggggagcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggtt 118  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||| ||||||||||    
T  26074993 agggggagcttgatgaattgatggactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggtt 26074894  T
Q  119 gaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||  |||||||| ||||||||||||||| |||| |||||||||||||||||    
T  26074893 gaacacaatataagtaggaggacccataaacctattgtcttaaggttttgggtaa 26074839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 64 - 178
Target Start/End: Complemental strand, 18603286 - 18603172
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    |||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18603286 tgttagttttcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 18603187  T
Q  164 ttttgggtaagagtg 178  Q
    |||||||||||||||    
T  18603186 ttttgggtaagagtg 18603172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 6500443 - 6500567
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  6500443 tgttggtttgcaagtgtgagttatatgtcc-acatcggataaaatagtaaaggttgaacaccttataagtaagaggacctttaaacccattgccttaagg 6500541  T
Q  164 ttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||| | ||||||||    
T  6500542 ttttgggtaagagtgtggtgtctctc 6500567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 40296473 - 40296356
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40296473 tgcaagtgtgagttatatgtcccacatcggataaaatagaaaaggttgaacaccttataagtaagaggacccataaacccattgccttgaggttttgggt 40296374  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  40296373 aagagtgtggtgtctctc 40296356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 65 - 178
Target Start/End: Original strand, 41170627 - 41170740
Alignment:
Q  65 gttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggt 164  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41170627 gttggtttgtaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggt 41170726  T
Q  165 tttgggtaagagtg 178  Q
    ||||||||||||||    
T  41170727 tttgggtaagagtg 41170740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 63 - 189
Target Start/End: Complemental strand, 9498821 - 9498695
Alignment:
Q  63 gtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag 162  Q
    |||||||||||||| ||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9498821 gtgttggtttgcaaatgtgagttatatgtctcacatcagatagaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag 9498722  T
Q  163 gttttgggtaagagtgcgatgtctctc 189  Q
     ||||||||||||||| | ||||||||    
T  9498721 attttgggtaagagtgtggtgtctctc 9498695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 9 - 178
Target Start/End: Complemental strand, 24489424 - 24489258
Alignment:
Q  9 agcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaat 108  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||| |||| ||     
T  24489424 agcttctggttgaggggtagcatgatgaattgatggactcacacttgagggggagtgtt-gtgttcaagtgtgagttatatgtcccacatcagatagaaa 24489326  T
Q  109 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    || ||||||| |||||||||| |||||||  ||||||||||||||||||||||| ||||| |||||||||    
T  24489325 agaaaaggttaaacaccttattagtaaga--acccataaacccattgccttaagattttgcgtaagagtg 24489258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 27502202 - 27502077
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||     
T  27502202 tgttggtttgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagaggacccataaacctattgccttaaga 27502103  T
Q  164 ttttgggtaagagtgcgatgtctctc 189  Q
    |||| ||||| |||| | ||||||||    
T  27502102 tttttggtaaaagtgtggtgtctctc 27502077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 79 - 189
Target Start/End: Complemental strand, 11417128 - 11417018
Alignment:
Q  79 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  11417128 gtgagttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaggttttgtgtaagagtg 11417029  T
Q  179 cgatgtctctc 189  Q
     ||| ||||||    
T  11417028 tgatctctctc 11417018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 15370099 - 15370216
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||  |||||||||||||||||    
T  15370099 tgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacatcttataagtaagaggacccataaatccacagccttaaggttttgggt 15370198  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  15370199 aagagtgtggtgtctctc 15370216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 36522120 - 36521948
Alignment:
Q  6 aagagcttctgcttgagg-gggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggata 104  Q
    ||||||||| |||||||| ||||  |||||||||||||||||||||||||||||| |||||||| |  ||||||||||||||||||||||||||| ||||    
T  36522120 aagagcttccgcttgaggtgggataacgatgaattgatggactcacacttgagggagagtgttg-tgcgcaagtgtgagttatatgtcccacatcagata 36522022  T
Q  105 aaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
     || |||  |||||||||||  | ||| | |||||||||||||||| |||||||||||||||||||||||||||    
T  36522021 gaaaagttgaggttgaacactctttaaatgagaggacccataaaccaattgccttaaggttttgggtaagagtg 36521948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 36492378 - 36492258
Alignment:
Q  69 gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttg 168  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||| |||| ||||||||    
T  36492378 gtttgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggaccaataaacacattacctttaggttttg 36492279  T
Q  169 ggtaagagtgcgatgtctctc 189  Q
    | |||||||| | ||||||||    
T  36492278 gataagagtgtggtgtctctc 36492258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 74 - 173
Target Start/End: Complemental strand, 26075318 - 26075219
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26075318 caagtgtgatttatatgtctcacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 26075219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 25327938 - 25328052
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaag 174  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  25327938 aagtgtgagttatatgtcctacatcggataaaacagtaaaagttgaacaccttataagtaagaggacccataaacctaatgccttaaggttttgggtaag 25328037  T
Q  175 agtgcgatgtctctc 189  Q
    |||| | ||||||||    
T  25328038 agtgtggtgtctctc 25328052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 73 - 178
Target Start/End: Original strand, 299490 - 299595
Alignment:
Q  73 gcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggta 172  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||    
T  299490 gcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagatgacccataaactcatagccttaaggttttgtgta 299589  T
Q  173 agagtg 178  Q
    ||||||    
T  299590 agagtg 299595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 6224198 - 6224302
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  6224198 caagtgtgagttatatgtcccacttcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcatcgccttaaggtttttggtaa 6224297  T
Q  174 gagtg 178  Q
    |||||    
T  6224298 gagtg 6224302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 3295498 - 3295386
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaag 174  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  3295498 aagtgtgagt-atatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaccaattgccttaaggtttt-ggtaag 3295401  T
Q  175 agtgcgatgtctctc 189  Q
    |||| | ||||||||    
T  3295400 agtgtgttgtctctc 3295386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 74 - 188
Target Start/End: Complemental strand, 42405752 - 42405638
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||| |||||||| | ||||||||||||||||||||    
T  42405752 caagtgtgagttatatgtccaacatcggataaaatagtaaaggttgaacaccttacaagtaaaaggactcataaacctaatgccttaaggttttgggtaa 42405653  T
Q  174 gagtgcgatgtctct 188  Q
    ||||| | |||||||    
T  42405652 gagtgtggtgtctct 42405638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 35150007 - 35150123
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||    
T  35150007 tgcaagtgtgagttatatgtcccacatcggataaaagagtcaaggttgaacaccttataagtaaga-gacccataaatccattgtcttaaggttttgggt 35150105  T
Q  172 aagagtgcgatgtctctc 189  Q
    || |||| | ||||||||    
T  35150106 aaaagtgtggtgtctctc 35150123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 41632782 - 41632899
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||    
T  41632782 tgcaagtgtaagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccaatgctttaagattttgggt 41632881  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  41632882 aagagtgtggtgtctctc 41632899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 12662810 - 12662704
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||||| |||||| |||||| ||||||||    
T  12662810 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacattttataagtaagaaaacccataaatccattgtcttaagtttttgggt 12662711  T
Q  172 aagagtg 178  Q
    |||||||    
T  12662710 aagagtg 12662704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 36568725 - 36568619
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||| ||| ||||| ||||||||||||||||||||||| |||    
T  36568725 tgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttgaacaccttataagtgagatgacccgtaaacccattgccttaaggtttttggt 36568626  T
Q  172 aagagtg 178  Q
    |||||||    
T  36568625 aagagtg 36568619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 167
Target Start/End: Original strand, 31509555 - 31509718
Alignment:
Q  6 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccacatcgga 102  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||  ||||| | ||||||||||||||||||||| |||||||||    
T  31509555 aagagcttccgcttgaggggtgagcatgatgaattgatggactcacacttgagggagagattgttg-tgtgcaagtgtgagttatatgtctcacatcgga 31509653  T
Q  103 taaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggtttt 167  Q
    || || |||  ||||||| ||| |||||||| ||||||| ||||||| ||||||||| |||||||    
T  31509654 tagaaaagtggaggttgagcactttataagtgagaggactcataaactcattgccttgaggtttt 31509718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 623810 - 623935
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| |||||||  || ||||||||  || |||||||||    
T  623810 tgttggtttgcaagtgtgagttatatgtctcacatcggatataatagtaaaggttgaacactttacaagtaagttgagccataaacttatagccttaagg 623909  T
Q  164 ttttgggtaagagtgcgatgtctctc 189  Q
    ||||| ||||||||| | ||||||||    
T  623910 ttttgagtaagagtgtggtgtctctc 623935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 69 - 178
Target Start/End: Complemental strand, 29549416 - 29549307
Alignment:
Q  69 gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttg 168  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||||||||    
T  29549416 gtttgcaagtgtgagttatatgttccatatcagataaaatagtaaaggatgaacaccatataagtaagaagacccataaacacattaccttaaggttttg 29549317  T
Q  169 ggtaagagtg 178  Q
    | ||||||||    
T  29549316 gataagagtg 29549307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 1028673 - 1028569
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||||||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||||||||||||| ||  |||||||||||| |||||    
T  1028673 caagtgtgagttatatgtcccacatcggatagaaaagtaaaggatgaacactttataagtaagaggacccataaacctataaccttaaggtttttggtaa 1028574  T
Q  174 gagtg 178  Q
    |||||    
T  1028573 gagtg 1028569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 178
Target Start/End: Complemental strand, 34753173 - 34753077
Alignment:
Q  82 agttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||||||||||||||| ||||| || |||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  34753173 agttatatgtcccacattggatagaaaagtaaaagttgaacaccttataagtaagaagacccataaaccgattgccttaaggttttgggtaagagtg 34753077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 189
Target Start/End: Original strand, 38427518 - 38427664
Alignment:
Q  33 atgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataag 132  Q
    |||||| |||||||||||||||||||||||||||||         ||||||||||||||||||||| ||||| || ||||||||||||||| ||||||||    
T  38427518 atgaatagatggactcacacttgagggggagtgttg---------tgtgagttatatgtcccacattggatagaaaagtaaaggttgaacatcttataag 38427608  T
Q  133 taagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    | ||||||||||| || |||||| |||||||||||| ||||||||| || |||||||    
T  38427609 t-agaggacccattaatccattgtcttaaggttttgtgtaagagtgtgacgtctctc 38427664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 36522459 - 36522278
Alignment:
Q  9 agcttctgcttgagggg--gagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaa 106  Q
    |||||| ||||||||||  || ||||||||||||||||| | ||| |||||||||||||||| | || |||||||||||||||||| ||||| ||||| |    
T  36522459 agcttccgcttgaggggaggaacacgatgaattgatggatttacaattgagggggagtgttg-tatgaaagtgtgagttatatgtctcacattggataga 36522361  T
Q  107 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    | | |  | ||||||||  |||||||| |||||||| |||||||||||  |||||||||||||||||||||| | ||||||||    
T  36522360 aaaatggaagttgaacattttataagtgagaggaccaataaacccattatcttaaggttttgggtaagagtgtggtgtctctc 36522278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 5723957 - 5723844
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||||||| |||||| ||   |||| |||||||    
T  5723957 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaataataaaagttgaacacattatatgtaagagaacccattaatttattgtcttaagg 5723858  T
Q  164 ttttgggtaagagt 177  Q
    ||||||| ||||||    
T  5723857 ttttgggaaagagt 5723844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 84 - 189
Target Start/End: Original strand, 33747783 - 33747888
Alignment:
Q  84 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatg 183  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||||||| |||||||| |||||||||||| |||||| |||||||| | ||    
T  33747783 ttatatgtcccacatcggataaaatagtaaaggttaaatactttataagtaagaggatccataaactcattgccttaagattttggataagagtgtggtg 33747882  T
Q  184 tctctc 189  Q
    ||||||    
T  33747883 tctctc 33747888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 7768842 - 7768925
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataa 147  Q
    ||||||||| |||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  7768842 tgttggttttcaagtgtgagttatatatcctacatcggataaaataataaaggttgaacaccttataagtaaaaggacccataa 7768925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 74 - 167
Target Start/End: Original strand, 42508614 - 42508707
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggtttt 167  Q
    ||||||||| |||||| |||||||||||||| || |||||||||| |||| || |||||||||||||| |||||||||||||||||||||||||    
T  42508614 caagtgtgaattatatatcccacatcggatagaaaagtaaaggttaaacatctaataagtaagaggactcataaacccattgccttaaggtttt 42508707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 15370428 - 15370508
Alignment:
Q  98 tcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||| ||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  15370428 tcggatgaaacagtaaatgttgaacaccttataagtaagaggacccataaacccatagccttaaggttttgcgtaagagtg 15370508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 74 - 190
Target Start/End: Complemental strand, 35167994 - 35167878
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||| |||||||| | || |||||| ||||||| |||||||||||||||||||||||||| || |||||||||| | |||||||| | ||||| |||||    
T  35167994 caagtatgagttatgtatctcacatcagataaaagagtaaaggttgaacaccttataagtaggatgacccataaatctattgccttgatgtttttggtaa 35167895  T
Q  174 gagtgcgatgtctctca 190  Q
    ||||| |||||||||||    
T  35167894 gagtgtgatgtctctca 35167878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 152
Target Start/End: Original strand, 26074320 - 26074398
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaccca 152  Q
    |||||||||||||||||||||||||| |||| || | ||||| ||||||||||||||||||||||||||||||||||||    
T  26074320 caagtgtgagttatatgtcccacatcagatagaaaactaaagattgaacaccttataagtaagaggacccataaaccca 26074398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 75 - 178
Target Start/End: Original strand, 2411010 - 2411113
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaag 174  Q
    ||||||||||||||||||| |||| ||||| |  |||||| |||||||| ||| |||||||||| ||||||||||  ||||||||||||||||| |||||    
T  2411010 aagtgtgagttatatgtcctacattggatagagaagtaaaagttgaacatcttgtaagtaagagaacccataaacttattgccttaaggttttgagtaag 2411109  T
Q  175 agtg 178  Q
    ||||    
T  2411110 agtg 2411113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 26591068 - 26590962
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||| ||| |||| ||| |||| ||  || |||||||||||||||||||||||||||||||| |||||||  || ||||||||||||||| ||    
T  26591068 tgcaagtgtgatttaaatgttccatatcgaatcgaaaagtaaaggttgaacaccttataagtaagaggatccataaattcaatgccttaaggttttgagt 26590969  T
Q  172 aagagtg 178  Q
    |||||||    
T  26590968 aagagtg 26590962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 300961 - 301068
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||        || ||||||||||||| |||| |||||    
T  300961 caagtgtgggttatatgtcccacatcagataaaacagtaaaggttgaataccttataagtaagag--------aatccattgccttaagatttttggtaa 301052  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| | ||||||||    
T  301053 gagtgtggtgtctctc 301068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 13785837 - 13785732
Alignment:
Q  2 aagtaagagcttctgcttgagggggag-cacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcg 100  Q
    ||||||||||||| |||||| |||||  || ||||||| ||| |||||||| |||||||||||||||| | || ||||||||||||||||||||| ||||    
T  13785837 aagtaagagcttccgcttgaaggggaaacatgatgaatagatagactcacatttgagggggagtgttg-tgtggaagtgtgagttatatgtcccaaatcg 13785739  T
Q  101 gataaaa 107  Q
    |||||||    
T  13785738 gataaaa 13785732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 35914852 - 35914934
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgcc 157  Q
    |||| ||||||||||||| |||||||||||||| |||||||||||||||  |||||||||||| ||||| |||| ||||||||    
T  35914852 aagtatgagttatatgtcacacatcggataaaagagtaaaggttgaacattttataagtaagaagacccgtaaatccattgcc 35914934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 39309686 - 39309764
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccat 153  Q
    ||||| ||||||||||||||||||||||||||||  ||||| ||||||||| |||||| |||||||| ||||||||||||    
T  39309686 caagtatgagttatatgtcccacatcggataaaagggtaaatgttgaacacattataaataagagga-ccataaacccat 39309764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 178
Target Start/End: Complemental strand, 41635346 - 41635243
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaag 174  Q
    |||| ||||||||||||  | |||| ||||||| |||||| |||||||||||||||| |||||||| ||||||| |||||| |||||  |||| ||||||    
T  41635346 aagtatgagttatatgtttcccatcagataaaagagtaaatgttgaacaccttataaataagaggatccataaatccattgtcttaaaattttaggtaag 41635247  T
Q  175 agtg 178  Q
    ||||    
T  41635246 agtg 41635243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 13786157 - 13786042
Alignment:
Q  74 caagtgtgagttat-atgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggta 172  Q
    ||||||||||| || ||||  |||||||||||||| ||| | |||||||||| |||||||||||| ||||| |||| | |||| |||||| |||||| ||    
T  13786157 caagtgtgagtaattatgtttcacatcggataaaa-agtgatggttgaacactttataagtaagatgacccgtaaatctattgtcttaagattttggata 13786059  T
Q  173 agagtgcgatgtctctc 189  Q
    |||||| ||||||||||    
T  13786058 agagtgtgatgtctctc 13786042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 209
Target Start/End: Original strand, 13042606 - 13042676
Alignment:
Q  139 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggtcctagatgt 209  Q
    ||||||||||||||||||||||||||||||| |||||||| | ||||||||  |||| | |||||||||||    
T  13042606 gacccataaacccattgccttaaggttttggataagagtgtggtgtctctctcttagcgtgtcctagatgt 13042676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 167
Target Start/End: Original strand, 42524719 - 42524811
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggtttt 167  Q
    ||||||||| ||||||||| ||||||||||| || |||||| |||||||| ||||| | ||||||||| |||||| |||||| || ||||||||    
T  42524719 caagtgtgaattatatgtctcacatcggatagaaaagtaaa-gttgaacatcttatgaataagaggactcataaatccattgtctgaaggtttt 42524811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9498478 - 9498411
Alignment:
Q  1 aaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgtt 67  Q
    ||||||||||||||  ||||| ||||||||| ||||||| |||||||||||||||||||||| |||||    
T  9498478 aaagtaagagcttccccttgaagggggagcatgatgaatagatggactcacacttgagggggtgtgtt 9498411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 6225047 - 6225104
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataag 132  Q
    |||| |||||||||| ||||||||| ||||||| | ||||||||||||||||||||||    
T  6225047 aagtctgagttatatatcccacatcagataaaagaataaaggttgaacaccttataag 6225104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 167
Target Start/End: Original strand, 31509745 - 31509826
Alignment:
Q  86 atatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggtttt 167  Q
    ||||||| ||||||||||| || |||  ||||||| ||| |||||||| ||||||| ||||||| ||||||||| |||||||    
T  31509745 atatgtctcacatcggatagaaaagtggaggttgagcactttataagtgagaggactcataaactcattgccttgaggtttt 31509826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 5660290 - 5660338
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagta 112  Q
    ||||||||||||| |||||||||||||| |||||||| |||||||||||    
T  5660290 tgttggtttgcaaatgtgagttatatgttccacatcgaataaaatagta 5660338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 209
Target Start/End: Original strand, 13112604 - 13112674
Alignment:
Q  139 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggtcctagatgt 209  Q
    ||||||||||||||||| ||||||||||||| |||||||| | ||||| ||  |||| | |||||||||||    
T  13112604 gacccataaacccattgtcttaaggttttggataagagtgtggtgtctttctcttagcgtgtcctagatgt 13112674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 114
Target Start/End: Original strand, 35150747 - 35150789
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaa 114  Q
    ||||||||||||||||||||||||||||| |||||| ||||||    
T  35150747 tgcaagtgtgagttatatgtcccacatcgaataaaagagtaaa 35150789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 114
Target Start/End: Original strand, 35151038 - 35151080
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaa 114  Q
    ||||||||||||||||||||||||||||| |||||| ||||||    
T  35151038 tgcaagtgtgagttatatgtcccacatcgaataaaagagtaaa 35151080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 36389359 - 36389307
Alignment:
Q  151 cattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggtcct 203  Q
    |||||||||| ||||||||||||  ||| |||||||||| |||||||||||||    
T  36389359 cattgccttagggttttgggtaacggtgtgatgtctctcttttagtgggtcct 36389307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 36527196 - 36527136
Alignment:
Q  129 taagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||| |||||| |||||||| |||||||||||| |||||| |||||||| | ||||||||    
T  36527196 taagtgagaggatccataaacgcattgccttaagattttggataagagtgtgctgtctctc 36527136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 15370380 - 15370426
Alignment:
Q  40 gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagt 84  Q
    |||||||||||||||||||||||||||||  || |||||||||||||    
T  15370380 gatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagt 15370426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 32445943 - 32446002
Alignment:
Q  130 aagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||| ||||||||||||||||||  ||||||||||||||||| | |||| | ||||||||    
T  32445943 aagtgagaggacccataaacccaacgccttaaggttttgggttaaagtgtggtgtctctc 32446002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 13112782 - 13112836
Alignment:
Q  152 attgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggtcctaga 206  Q
    |||||||||||||||||||||||| || | ||||||||  |||| ||||||||||    
T  13112782 attgccttaaggttttgggtaagaatgtggtgtctctctcttagcgggtcctaga 13112836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 19275566 - 19275631
Alignment:
Q  109 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaga 175  Q
    |||| ||||||||||| ||||||| |||| ||||||||||  ||||| |||||| ||||||||||||    
T  19275566 agtagaggttgaacac-ttataaggaagaagacccataaattcattgtcttaagattttgggtaaga 19275631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 22299014 - 22298956
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggat-aaaatagtaaaggttgaa 121  Q
    |||||||||||| ||||| |||||||||| |||||| ||| |||||| |||||||||||    
T  22299014 tgttggtttgcatgtgtgggttatatgtctcacatcagataaaaataataaaggttgaa 22298956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 5283 - 5474
Alignment:
Q  1 aaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccaca 97  Q
    |||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||| |||| |||  || |||||||||||||||||||| |||||    
T  5283 aaagtaagagcttccgcttgaagggggagcacgatgaactgatggactcacacttgagggagagttttgttgtgtgcaagtgtgagttatatgttccaca 5382  T
Q  98 tcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | ||||||||    
T  5383 tcggatagaacagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtggtgtctctc 5474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 4982 - 5099
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||| ||||||||| ||||||||| | || |||||||||| || | ||||||||||| | ||||||||||| |||||||||| ||||||||||    
T  4982 tgcaagtgtgaattatatgtctcacatcggagagaacagtaaaggtttaatatcttataagtaaaaagacccataaactcattgccttatggttttgggt 5081  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  5082 aagagtgtggtgtctctc 5099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 2e-60; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 189
Target Start/End: Original strand, 54108845 - 54109029
Alignment:
Q  2 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcg 100  Q
    ||||||||||||| |||||| ||||||||| |||||||| || ||||||||||| ||||||||||||| | ||||||||| ||||||  |||||||||||    
T  54108845 aagtaagagcttccgcttgaagggggagcatgatgaattaatagactcacacttaagggggagtgttg-tgtgcaagtgtcagttat--gtcccacatcg 54108941  T
Q  101 gataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||    
T  54108942 gataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa-gttttgggtaagagtgtggtgtctctc 54109029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 2740999 - 2741177
Alignment:
Q  1 aaagtaagagcttctgcttgagggggag--cacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacat 98  Q
    |||||||||||||| |||||| ||||||  || ||||||||||||||||||||||||| ||||||||||  | |||||||||||||||||||||||||||    
T  2740999 aaagtaagagcttccgcttgaaggggagagcatgatgaattgatggactcacacttgaaggggagtgtta-tgtgcaagtgtgagttatatgtcccacat 2741097  T
Q  99 cggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    | |||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  2741098 cagatagaatagtaaaggttgaataccttataagtaagaggacccataactccattgccttaaggttttgggtaagagtg 2741177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 36629172 - 36629354
Alignment:
Q  7 agagcttctgcttgaggg-ggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataa 105  Q
    |||||||| |||||| || |||||| ||||||||||||| |||||||||||||||||||||||  || |||||||||||||||||||||||||||||||     
T  36629172 agagcttccgcttgaaggtggagcatgatgaattgatgggctcacacttgagggggagtgttgtgtt-caagtgtgagttatatgtcccacatcggatag 36629270  T
Q  106 aatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    || |||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  36629271 aaaagtaaaagttaaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 36629354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 2 - 189
Target Start/End: Original strand, 39404327 - 39404515
Alignment:
Q  2 aagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatc 99  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||| ||||||||| | ||  ||||||||||||||||||||||||||    
T  39404327 aagtaagagcttccgcttgagggagagcacgatgaattgatggact-acacttgaggaggagtgttgttgtgtacaagtgtgagttatatgtcccacatc 39404425  T
Q  100 ggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
     ||||||| ||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||| |||| || | ||||||||    
T  39404426 agataaaagagtaaaggtggaacaccttataagtaagaggacccataaacctatagccttaaggttttgggcaagaatgtggtgtctctc 39404515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 44620592 - 44620765
Alignment:
Q  6 aagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggat 103  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||||||||||| ||||||| |  || ||||||||||||||||||||||||||||||||    
T  44620592 aagagcttccgcttttgggggagcacgatgaattgatggactcacacttgaggtggagtgtcgttgtgtgcaagtgtgagttatatgtcccacatcggat 44620691  T
Q  104 aaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
     |||||||| ||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  44620692 gaaatagtagaggttgaacactttataagtaagaggacccataaa-ccataaccttaaggttttgggtaagagtg 44620765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 62 - 189
Target Start/End: Complemental strand, 50630921 - 50630794
Alignment:
Q  62 agtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 161  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50630921 agtgttggtttgcaagcgtgagttatatgtcctacatcggataaaatagtaaaggttgaacacattataagtaagaggacccataaacccattgccttaa 50630822  T
Q  162 ggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||||| | ||||||||    
T  50630821 ggttttgggtaagagtgtggtgtctctc 50630794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 55933288 - 55933163
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  55933288 tgttggtttgcaagtgtgagttatatgtcctacatcggataaaatagtaagggttgaacaccttataagtaagaggacccataaacccattgccttaaag 55933189  T
Q  164 ttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||| | ||||||||    
T  55933188 ttttgggtaagagtgtggtgtctctc 55933163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 52884856 - 52884985
Alignment:
Q  42 tggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagagg 139  Q
    ||||||||||||||||||| |||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52884856 tggactcacacttgagggg-agtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagagg 52884954  T
Q  140 acccataaacccattgccttaaggttttggg 170  Q
    | |||||||||||||||||||||||||||||    
T  52884955 atccataaacccattgccttaaggttttggg 52884985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 49880152 - 49880277
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  49880152 tgttggtttgcaagtgtgagttatatgtcccacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccactgccttaagg 49880251  T
Q  164 ttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||| | | ||||||||    
T  49880252 ttttgggtaagagcgtggtgtctctc 49880277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 20826167 - 20826334
Alignment:
Q  21 agggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttga 120  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||   | | || ||||||||||||||||||||||||||||||||||||| |||||    
T  20826167 agggggagcatgatgaatagatggactcacacttgagggggagtgttatgtagaaa-tgtgagttatatgtcccacatcggataaaatagtaaaagttga 20826265  T
Q  121 acaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||| ||||||||||||| |||||||||||||| |||||||  |||| |||||||||| ||||||||||    
T  20826266 acacgttataagtaagagaacccataaacccatagccttaacattttaggtaagagtgtgatgtctctc 20826334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 5 - 189
Target Start/End: Complemental strand, 18932983 - 18932788
Alignment:
Q  5 taagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgg-- 101  Q
    |||||| ||| |||||| ||||||||| ||||||| ||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||      
T  18932983 taagagtttccgcttgaagggggagcatgatgaatagatagactcacacttgaggggg-gtgttggtttgcaagtctgagttatatgtcccacatcggtc 18932885  T
Q  102 ---------ataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
             |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||    
T  18932884 ctacatcggataaaatagtaaaggttgaataccttataaataagaggacccataaacccattgccttaaggttttaggtaagagtgtggtgtctctc 18932788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 64 - 178
Target Start/End: Original strand, 41370349 - 41370463
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |    
T  41370349 tgttggtttgcaagtgtgagttatatgtcccaaatcggataaaatagtaaatgttgaaaaccttataagtaagaggacccataaacccattgccttaaag 41370448  T
Q  164 ttttgggtaagagtg 178  Q
    |||||||||||||||    
T  41370449 ttttgggtaagagtg 41370463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 25483336 - 25483453
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  25483336 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacatcttataagtaagaggatccataaacccattgccttaaggttttgggt 25483435  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  25483436 aagagtgtggtgtctctc 25483453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 54017751 - 54017634
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  54017751 tgcaagtgtgagttatatgtcccacgtcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttaggt 54017652  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| ||||||||||    
T  54017651 aagagtgtgatgtctctc 54017634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 22028150 - 22028000
Alignment:
Q  41 atggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 138  Q
    |||||||||||||| ||| || ||||||  || ||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  22028150 atggactcacacttaaggaggggtgttgttgtgtgcaagtgtgacttatatgtcccacatcggataaaatacgaaaggttgaacaccttataagtaagag 22028051  T
Q  139 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||||||  |||||||||||||||||||||||| || | ||||||||    
T  22028050 gacccataaacatattgccttaaggttttgggtaagaatgtggtgtctctc 22028000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 21 - 175
Target Start/End: Complemental strand, 3244657 - 3244504
Alignment:
Q  21 agggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttga 120  Q
    ||||||| || ||||||| ||||||||||| ||| |||| |||||||| | ||||||||||||||||||||| ||||||||||| || ||||||||||||    
T  3244657 agggggaacatgatgaatagatggactcacgcttaagggagagtgttg-tgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttga 3244559  T
Q  121 acaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaga 175  Q
    ||| ||||||||||||||||||||||||| ||||| ||||| |||||||||||||    
T  3244558 acatcttataagtaagaggacccataaactcattgtcttaaagttttgggtaaga 3244504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 4955473 - 4955367
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4955473 tgcaagtgtgagttatatgtctcatatcggataaaatagttaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggttttgggt 4955374  T
Q  172 aagagtg 178  Q
    |||||||    
T  4955373 aagagtg 4955367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 52884695 - 52884813
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggtttt-ggg 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||| |||    
T  52884695 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagatgatcgataaacccattgccttaaggttttgggg 52884794  T
Q  171 taagagtgcgatgtctctc 189  Q
    |||||||| | ||||||||    
T  52884795 taagagtgtggtgtctctc 52884813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 50002423 - 50002543
Alignment:
Q  69 gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttg 168  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||| || |||||||||||||||||||| |||||| ||||||||||||    
T  50002423 gtttgcaagtgtgagttatatgtctcacatcggataaaagagtaaaggttgaacactttttaagtaagaggacccataaatccattgtcttaaggttttg 50002522  T
Q  169 ggtaagagtgcgatgtctctc 189  Q
    |||||||||| | ||||||||    
T  50002523 ggtaagagtgtggtgtctctc 50002543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 34646803 - 34646688
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  34646803 caagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataactaagaggactcataaactcattgccttaaggttttgggtaa 34646704  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| | ||||||||    
T  34646703 gagtgtggtgtctctc 34646688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 44621358 - 44621492
Alignment:
Q  6 aagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggat 103  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||| |  || |||||||||||||||||||||| |||| ||||    
T  44621358 aagagcttccgcttttgggggagcacgatgaattgatggactcacacttgagggggagtgtcgttgtgtgcaagtgtgagttatatgtccaacatgggat 44621457  T
Q  104 aaaatagtaaaggttgaacaccttataagtaagag 138  Q
    |||| |||||||||| |||||||||||||||||||    
T  44621458 aaaacagtaaaggttaaacaccttataagtaagag 44621492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 49076679 - 49076510
Alignment:
Q  2 aagtaagagcttctgcttga-gggggagcacgatgaat--tgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccac 96  Q
    ||||||||| ||| |||||| |||||| || ||||||   |||||||||||||||||||| |||||||||  || |||||||||||||||||||| |||     
T  49076679 aagtaagagtttccgcttgaagggggaacatgatgaaaagtgatggactcacacttgaggaggagtgttgttgtgtgcaagtgtgagttatatgtaccat 49076580  T
Q  97 atcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttt 166  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||    
T  49076579 atcggataaaacagtaaaggttgaacaccttataagtaagaggacctataaacccattgtcttaaagttt 49076510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 3341083 - 3341242
Alignment:
Q  29 cacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacct 126  Q
    |||||| || ||||||||||||||||||||  ||||||||  || ||||||||||||||||||||||||||| |||||||| |||||||||| ||||| |    
T  3341083 cacgataaagtgatggactcacacttgaggcagagtgttgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttaaacactt 3341182  T
Q  127 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtct 186  Q
    |||||||||||||||||||||   |||||  ||||| ||||||||||||||| |||||||    
T  3341183 tataagtaagaggacccataacatcattgttttaagattttgggtaagagtgtgatgtct 3341242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 10245920 - 10246034
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||    
T  10245920 tgcaagtgtgagttatatgccccacatcggataaaagagtaaaggttgaacaccttataagtaagagga-ccataaacccaaagccttaaggttttgggt 10246018  T
Q  172 aagagtgcgatgtctc 187  Q
    ||||||| | ||||||    
T  10246019 aagagtgtggtgtctc 10246034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 1731803 - 1731697
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||| |||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||    
T  1731803 tgcaaatgtgagttatatgtcccacatcagataaaacagtaaaggttgaacatcttataaataagaggacccataaaccaattgccttaaggttttgggt 1731704  T
Q  172 aagagtg 178  Q
    |||||||    
T  1731703 aagagtg 1731697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 178
Target Start/End: Original strand, 3340807 - 3340913
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||||| |||| ||| ||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3340807 tgcaagtgtgagttatatgtcccgcatcagatgaaagagtaaaggttgagcaccttataagtaagaggacccataaacccactgccttaaggttttgggt 3340906  T
Q  172 aagagtg 178  Q
    |||||||    
T  3340907 aagagtg 3340913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 91 - 189
Target Start/End: Original strand, 54936215 - 54936313
Alignment:
Q  91 tcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  54936215 tcccacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctc 54936313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 36608817 - 36608700
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||| ||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||    
T  36608817 tgcaagtgtgagttatatgtccaacatcggataaaagagtaaaagttgaacacctcataagtaagaggatccataaatccattgtcttaaggttttgggt 36608718  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| | ||||||||    
T  36608717 aagagtgtggtgtctctc 36608700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 16888971 - 16888855
Alignment:
Q  73 gcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggta 172  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||| ||| |||||| ||||| |||| |||||||||||    
T  16888971 gcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaataccttataagtaagagaacctataaactcattgtcttacggttttgggta 16888872  T
Q  173 agagtgcgatgtctctc 189  Q
    |||||| ||||||||||    
T  16888871 agagtgtgatgtctctc 16888855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 81 - 189
Target Start/End: Original strand, 44620362 - 44620470
Alignment:
Q  81 gagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcg 180  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||| |    
T  44620362 gagttatatgttccacatcggataaaacagtaaaggttgaacaccttataaataagagagcccataaacccattgccttaaggttttgggtaagagtgtg 44620461  T
Q  181 atgtctctc 189  Q
    |||| ||||    
T  44620462 atgtttctc 44620470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 36572021 - 36572124
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |    
T  36572021 caagtgtgagttatatgtcccacatcgaataaaagagtaaatgttgaacaccttataagtaagaagacccataaatccattgccttaaggttttgggtta 36572120  T
Q  174 gagt 177  Q
    ||||    
T  36572121 gagt 36572124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 72 - 178
Target Start/End: Original strand, 2740700 - 2740806
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||  ||    
T  2740700 tgcaagtgtgagttatatgtcccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacctataaacccagagccttaaggttttacgt 2740799  T
Q  172 aagagtg 178  Q
    |||||||    
T  2740800 aagagtg 2740806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 22183420 - 22183314
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||| ||||||||||||||||| |||||| ||||||||  |||||||||| ||||||||||||||||||||||||||||||||| |    
T  22183420 tgcaagtgtgagttatatatcccacatcggataaaagagtaaatgttgaacaatttataagtaaaaggacccataaacccattgccttaaggttttggat 22183321  T
Q  172 aagagtg 178  Q
    |||||||    
T  22183320 aagagtg 22183314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 87 - 189
Target Start/End: Original strand, 45496820 - 45496922
Alignment:
Q  87 tatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtct 186  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||| | |||||    
T  45496820 tatgtcccacatcggataaaatcgtaaaggttgaacaccttataagtaagaggacctataaactcattgtcttaaggttttgggtaagagtgtggtgtct 45496919  T
Q  187 ctc 189  Q
    |||    
T  45496920 ctc 45496922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 75 - 178
Target Start/End: Original strand, 49302907 - 49303012
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa--gtaagaggacccataaacccattgccttaaggttttgggta 172  Q
    |||||||||||||||||||||||||  |||||| ||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||    
T  49302907 aagtgtgagttatatgtcccacatcaaataaaaaagtaaaggttgaacatcttataaaagtaagaggacccataaacccattgccttaaggttttgggta 49303006  T
Q  173 agagtg 178  Q
    ||||||    
T  49303007 agagtg 49303012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 39793014 - 39792899
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||||||||||||||||||||| |||| || |||||| ||||||||||||||||| ||||||| || ||||| |||||||||||||||||||||||    
T  39793014 caagtgtgagttatatgtcccacatcagatagaaaagtaaatgttgaacaccttataagaaagaggaaccgtaaactcattgccttaaggttttgggtaa 39792915  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| | ||||||||    
T  39792914 gagtgtggtgtctctc 39792899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 41707618 - 41707504
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| || |||||||||| ||||| ||||||||||| |||||    
T  41707618 caagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccatataagtaaaagaacccataaactcattgtcttaaggtttt-ggtaa 41707520  T
Q  174 gagtgcgatgtctctc 189  Q
    ||||| | ||||||||    
T  41707519 gagtgtggtgtctctc 41707504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 32941279 - 32941162
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||  |||||||| | || ||||||||||||||||||||||| ||||||| | ||||||| |||||||||||||||||||||    
T  32941279 tgcaagtgtgagttatatgtcttacatcggaaagaacagtaaaggttgaacaccttataaataagagggctcataaactcattgccttaaggttttgggt 32941180  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| || |||||||    
T  32941179 aagagtgtgacgtctctc 32941162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 54343147 - 54343047
Alignment:
Q  82 agttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcga 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |     
T  54343147 agttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac-------cccattgccttaaggttttgggtaagagtgtgg 54343055  T
Q  182 tgtctctc 189  Q
    ||||||||    
T  54343054 tgtctctc 54343047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 78 - 178
Target Start/End: Original strand, 20825842 - 20825942
Alignment:
Q  78 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 177  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||  | |||||||||||||||||||||||    
T  20825842 tgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataaataagagcacccataaacctttagccttaaggttttgggtaagagt 20825941  T
Q  178 g 178  Q
    |    
T  20825942 g 20825942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 188
Target Start/End: Complemental strand, 45489561 - 45489372
Alignment:
Q  2 aagtaagagcttctgcttgagggggagcacgatgaatt-gatggactcacacttgaggggg-agtgttggtttg--caagtgtgagttatatgtcccaca 97  Q
    ||||||||||||| |||||| | |||||| ||||||   |||||||||||||||||||||| ||||||| | ||  ||||||||| ||||||||| ||||    
T  45489561 aagtaagagcttccgcttgaagaggagcatgatgaaaacgatggactcacacttgaggggggagtgttgttgtgtacaagtgtgaattatatgtctcaca 45489462  T
Q  98 tcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 188  Q
    |||||||||| ||||||||||||||||| |||||||||||| || | |||||| | ||  ||||| |||| |||||||||| |||||||||    
T  45489461 tcggataaaagagtaaaggttgaacaccatataagtaagagaactcttaaacctactg-tttaagatttttggtaagagtgtgatgtctct 45489372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 178
Target Start/End: Complemental strand, 6975620 - 6975506
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 163  Q
    |||| |||||||| ||||||||||||||| |||||| ||||||||||||||||||||| | ||||||||||||||||| |||||| |||||  ||||||     
T  6975620 tgttagtttgcaaatgtgagttatatgtctcacatccgataaaatagtaaaggttgaatatcttataagtaagaggactcataaatccattatcttaaga 6975521  T
Q  164 ttttgggtaagagtg 178  Q
    |||||||||||||||    
T  6975520 ttttgggtaagagtg 6975506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 50459724 - 50459838
Alignment:
Q  75 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaag 174  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||||||||| ||||||||||||||||| ||||||||||||  ||||||||||| ||||||    
T  50459724 aagtgtgagttatatgttccacatcggttaaaagagtaaaggttgaacatcttataagtaagaggactcataaacccattatcttaaggttttaggtaag 50459823  T
Q  175 agtgcgatgtctctc 189  Q
    || | | ||||||||    
T  50459824 agcgtggtgtctctc 50459838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 54741334 - 54741228
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||| ||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||  |||| ||||||||||||| |    
T  54741334 tgcaagtgtgaattatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccatacacagattgtcttaaggttttggat 54741235  T
Q  172 aagagtg 178  Q
    |||||||    
T  54741234 aagagtg 54741228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 4390257 - 4390140
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||| || ||||||||| ||||||| |||||||||||||||||||||||||||||||| || | | | |||||| ||||||||||||||    
T  4390257 tgcaagtgtgagttacatatcccacatcagataaaagagtaaaggttgaacaccttataagtaagaggatcctttagcacattgcgttaaggttttgggt 4390158  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| || |||||||    
T  4390157 aagagtgtgacgtctctc 4390140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 178
Target Start/End: Original strand, 44621011 - 44621108
Alignment:
Q  81 gagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||||||||||||||||    
T  44621011 gagttgtatgacccacatcggataaaacagtaaaggttgaacaccttataagtaagagggcacataaactcattgtcttaaggttttgggtaagagtg 44621108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 85 - 178
Target Start/End: Complemental strand, 54017845 - 54017752
Alignment:
Q  85 tatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||||||    
T  54017845 tatatatcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccatattcccattgtcttaaggttttaggtaagagtg 54017752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 39404020 - 39404124
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||||||||||||||| |||| | |||||| |||||||||||||||| |||||||||||||||| ||||||| ||| || ||||||||||||||||    
T  39404020 caagtgtgagttatatgtcctacattgaataaaagagtaaaggttgaacactttataagtaagaggactcataaactcatagcattaaggttttgggtaa 39404119  T
Q  174 gagtg 178  Q
    |||||    
T  39404120 gagtg 39404124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 43174480 - 43174613
Alignment:
Q  48 cacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcggataaaat-agtaaaggttgaacaccttataagtaagaggaccca 144  Q
    ||||||||||||||||||||| | ||  ||||||||||||||||| | |||||| |||||||  ||||||||||||||||||||||||||||||||| ||    
T  43174480 cacacttgagggggagtgttgttgtgtacaagtgtgagttatatgccacacatcagataaaaagagtaaaggttgaacaccttataagtaagaggacaca 43174579  T
Q  145 taaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||| ||  |||||| || |||||||||||||    
T  43174580 taaacctatgaccttaaagtgttgggtaagagtg 43174613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 49076986 - 49076881
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||| ||| || || ||||||||||||||||||||||||||| |||||||| ||||||||||||||  ||||||||||||||||    
T  49076986 tgcaagtgtgagttatatgttccatattggctaaaatagtaaaggttgaacaccttat-agtaagagaacccataaacccataaccttaaggttttgggt 49076888  T
Q  172 aagagtg 178  Q
     ||||||    
T  49076887 tagagtg 49076881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 51768216 - 51768099
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||| |||||||||||||||| | |||| ||| || |||||| |||||||||||||||| ||||||||| ||||||| ||||| |||||||||||||||    
T  51768216 tgcaaatgtgagttatatgtcctatatcgaatataagagtaaatgttgaacaccttataaataagaggactcataaactcattgtcttaaggttttgggt 51768117  T
Q  172 aagagtgcgatgtctctc 189  Q
    || ||| |||||||||||    
T  51768116 aaaagtacgatgtctctc 51768099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 71 - 178
Target Start/End: Original strand, 54108537 - 54108643
Alignment:
Q  71 ttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccat-aaacccattgccttaaggttttgg 169  Q
    |||||||||||||||||  |||||| || |||||||||||||||||||||||||||||||||||| ||||||||| |||  |||||||||||||||||||    
T  54108537 ttgcaagtgtgagttat--gtcccatataggataaaatagtaaaggttgaacaccttataagtaaaaggacccataaaattcattgccttaaggttttgg 54108634  T
Q  170 gtaagagtg 178  Q
     ||||||||    
T  54108635 ctaagagtg 54108643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 161
Target Start/End: Original strand, 10246317 - 10246436
Alignment:
Q  44 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 141  Q
    ||||||| |||||||||||||| ||  || |||||||||  |||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  10246317 gactcacgcttgagggggagtgctgttgtgtgcaagtgtctgttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 10246416  T
Q  142 ccataaacccattgccttaa 161  Q
    |||||||||||| |||||||    
T  10246417 ccataaacccatagccttaa 10246436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 177
Target Start/End: Complemental strand, 16889691 - 16889587
Alignment:
Q  73 gcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggta 172  Q
    |||||||||||||||||||| || |||||||| || ||||||||||||| ||||||||||||||||||  |||||||| | |||||||| ||||||||||    
T  16889691 gcaagtgtgagttatatgtctcaaatcggatagaaaagtaaaggttgaataccttataagtaagaggattcataaacctactgccttaaagttttgggta 16889592  T
Q  173 agagt 177  Q
    |||||    
T  16889591 agagt 16889587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 22028527 - 22028408
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatag--taaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgg 169  Q
    ||||||||| | |||||||||| ||||||||||||| |   ||||||||||||||||||| ||||||||||||||||||| ||||| ||||| |||||||    
T  22028527 tgcaagtgttacttatatgtcctacatcggataaaaaaaaataaaggttgaacaccttattagtaagaggacccataaactcattgtcttaatgttttgg 22028428  T
Q  170 gtaagagtgcgatgtctctc 189  Q
    ||||||||| | ||||||||    
T  22028427 gtaagagtgtggtgtctctc 22028408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 34004739 - 34004635
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||||||||| |||||  ||||||| | ||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||| | |    
T  34004739 tgcaagtgtgagttatatgtcacacatatgataaaa-actaaaggttgaacaacttataagtaagaggacccataaactcatt-ccttaaggttttcgat 34004642  T
Q  172 aagagtg 178  Q
    |||||||    
T  34004641 aagagtg 34004635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 3700365 - 3700474
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    |||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||| |||        || ||||||||||||||||||| |    
T  3700365 tgcaagtgtgagttatatgtcctacatcggataaaagagtaaatgttgaacaccttataagtaaaagg--------actcattgccttaaggttttggat 3700456  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||  ||||||||||    
T  3700457 aagagtatgatgtctctc 3700474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 50788147 - 50788087
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 124  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  50788147 tgttggtttgcaagtgtaagttatatgtcccacatcggataaaatagtaaaggttgaacac 50788087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 72 - 178
Target Start/End: Original strand, 28034229 - 28034335
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||| ||||||||||| ||||||||| || |||  ||||||||||| |||||||| |||| ||||||||||  ||||| |||||||||| |||    
T  28034229 tgcaagtgtgaattatatgtcccgcatcggatagaaaagtggaggttgaacactttataagtgagagaacccataaacttattgctttaaggttttaggt 28034328  T
Q  172 aagagtg 178  Q
    |||||||    
T  28034329 aagagtg 28034335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 44620304 - 44620362
Alignment:
Q  80 tgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 138  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44620304 tgagttatatgtcccacatgggataaaatagtaaaggttgaacaccttataagtaagag 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 40067045 - 40067161
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaag-gttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggta 172  Q
    |||||||||||||||||| | |||||||||||||  |||||  ||||||||| |||||||||||||||| |||| | ||| | ||||||| |||||||||    
T  40067045 caagtgtgagttatatgttctacatcggataaaagtgtaaaaagttgaacacattataagtaagaggacacatagatccactaccttaagattttgggta 40067144  T
Q  173 agagtgcgatgtctctc 189  Q
    | |||| ||||||||||    
T  40067145 aaagtgtgatgtctctc 40067161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 31691203 - 31691258
Alignment:
Q  123 accttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31691203 accttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtg 31691258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 169
Target Start/End: Original strand, 760194 - 760286
Alignment:
Q  77 gtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgg 169  Q
    |||||||||||||||||||||||| ||| || | | ||||||||  || |||||||| ||||||||||||||| |||||||||||| ||||||    
T  760194 gtgtgagttatatgtcccacatcgaatagaaaaatgaaggttgagaactttataagtgagaggacccataaactcattgccttaagattttgg 760286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 19504707 - 19504802
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||| |||||||||||||||| |||||||||||||||||| |||||||||         ||||||||||||||| | |||||||||| |||||||||||    
T  19504707 caagtatgagttatatgtcccatatcggataaaatagtaaaagttgaacac---------aagaggacccataaatctattgccttaaagttttgggtaa 19504797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 189
Target Start/End: Complemental strand, 48111833 - 48111737
Alignment:
Q  93 ccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||| |||||||||| |||||||||||||||| |||||||||| |||||  ||||| ||||| |||||||||||| |||| ||||| | ||||||||    
T  48111833 ccacctcggataaaagagtaaaggttgaacacattataagtaaaaggacttataaatccattaccttaaggttttaggtatgagtgtggtgtctctc 48111737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 189
Target Start/End: Complemental strand, 15841482 - 15841407
Alignment:
Q  114 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||| || ||||| ||||||  ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  15841482 aggttgaacactttgtaagtgagaggattcataaacacattgccttaaggttttgggtaagagtgtgatgtctctc 15841407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 18879852 - 18879922
Alignment:
Q  118 tgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 188  Q
    |||||||||||||||||||| |||| ||||||| ||| ||||||||||||||||||||||| || ||||||    
T  18879852 tgaacaccttataagtaagatgacctataaacctatttccttaaggttttgggtaagagtgtgacgtctct 18879922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 56 - 138
Target Start/End: Original strand, 44620926 - 44621011
Alignment:
Q  56 agggggagtgttggtttg--caagtgtgagttatatgtccca-catcggataaaatagtaaaggttgaacaccttataagtaagag 138  Q
    ||||||||||||| | ||  ||||||||||||| |||||||| ||||||||||||  |||||||||||||||||||||||||||||    
T  44620926 agggggagtgttgttgtggacaagtgtgagttagatgtcccaacatcggataaaactgtaaaggttgaacaccttataagtaagag 44621011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 3271806 - 3271893
Alignment:
Q  94 cacatcggataaaatagtaaaggttgaacaccttat---aagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||| |||| || |||||| ||| ||||||||||   ||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  3271806 cacatcagatagaaaagtaaaagttaaacaccttattataagtaagagaacccataaacctattgccttaaggttttgggtaagagtg 3271893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 16889378 - 16889315
Alignment:
Q  6 aagagcttctgcttgagggggagcacgatgaat-tgatggactcacacttgagggggagtgttg 68  Q
    ||||||||| ||||||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  16889378 aagagcttccgcttgagggggagcacgattaaagtgatggactcacacttgagggggagtgttg 16889315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 23817783 - 23817720
Alignment:
Q  126 ttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  23817783 ttataagtaagaggattcataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 23817720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 15841208 - 15841035
Alignment:
Q  6 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggag-tgttggtttgcaagtgtgagttatatgtcccacatcggat 103  Q
    ||||||||| ||||||| || ||| | |||||||||||||| |||||||||| | |||| |  | || | ||| ||||| |||||||||||| ||| |||    
T  15841208 aagagcttccgcttgagtggtgagaatgatgaattgatggagtcacacttgacgaggagatcgttgtgtacaaatgtgaattatatgtcccatatcagat 15841109  T
Q  104 aaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    | || |||  ||| ||||||  |||||||| |||||| | ||||||||||||| |||| ||||||||||||||||    
T  15841108 agaaaagtggaggctgaacattttataagtgagaggatctataaacccattgctttaa-gttttgggtaagagtg 15841035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 41370673 - 41370738
Alignment:
Q  43 ggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaata 109  Q
    |||||||||||||||||| |||||||||||| ||| ||||||||||| ||||| |||||||||||||    
T  41370673 ggactcacacttgagggg-agtgttggtttgaaagagtgagttatatatcccatatcggataaaata 41370738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 23557022 - 23556905
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||||||| ||||   |||||||||| || |||  ||||||||||  |||||| |||||| | |||||||  ||||||||||| ||||||| |    
T  23557022 tgcaagtgtgagttaaatgttttacatcggatagaaaagtggaggttgaacattttataaataagagaatccataaaatcattgccttaaagttttggat 23556923  T
Q  172 aagagtgcgatgtctctc 189  Q
    ||||||| || |||||||    
T  23556922 aagagtgtgacgtctctc 23556905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 160
Target Start/End: Complemental strand, 11348484 - 11348396
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgcctta 160  Q
    ||||| |||||||||||||| | ||||| |||||||||||  ||||||||||| |||||||| |||||| ||||| |  ||||||||||    
T  11348484 tgcaattgtgagttatatgttctacatcagataaaatagtggaggttgaacactttataagtgagaggatccatatattcattgcctta 11348396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 178
Target Start/End: Original strand, 34544107 - 34544213
Alignment:
Q  75 aagtgtgagttatatgt--cccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg-ttttgggt 171  Q
    ||||||||||||||| |  | ||||||| ||| || |||  ||||||| ||| |||||| | ||||||||||||||| ||||||||||||| ||||||||    
T  34544107 aagtgtgagttatatatatctcacatcgaatagaaaagtggaggttgatcactttataaatgagaggacccataaactcattgccttaaggtttttgggt 34544206  T
Q  172 aagagtg 178  Q
    |||||||    
T  34544207 aagagtg 34544213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 11197293 - 11197343
Alignment:
Q  139 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||||||||    
T  11197293 gacccataaacccattgccttagggttttgggtaagagtgtggtgtctctc 11197343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 43827480 - 43827556
Alignment:
Q  112 aaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    |||| |||||| |||||||| ||||||||||||||||  ||||||||||||| ||||| |||||||| | ||||||||    
T  43827480 aaagattgaactccttataaataagaggacccataaattcattgccttaagg-tttggataagagtgtggtgtctctc 43827556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 1868119 - 1868157
Alignment:
Q  140 acccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  1868119 acccataaacccattgccttaaagttttgggtaagagtg 1868157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 2891924 - 2891864
Alignment:
Q  126 ttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtct 186  Q
    ||||||||||||||| ||||||||| | || ||||||||||||||| | |||| |||||||    
T  2891924 ttataagtaagaggatccataaacctaatgtcttaaggttttgggttaaagtgtgatgtct 2891864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 41707392 - 41707340
Alignment:
Q  2 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacact 53  Q
    |||||||||||||  ||||| ||||||||| ||||||||||||||||||||||    
T  41707392 aagtaagagcttccccttgaagggggagcatgatgaattgatggactcacact 41707340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 45050601 - 45050649
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttga 120  Q
    ||||||||||||||||||||| ||||||  |||||| ||||||||||||    
T  45050601 tgcaagtgtgagttatatgtctcacatcaaataaaagagtaaaggttga 45050649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 922485 - 922552
Alignment:
Q  139 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggtcctaga 206  Q
    ||||||||||||||||| |||| || ||||| |||||||| | |||||||| ||||| || |||||||    
T  922485 gacccataaacccattgtcttaggggtttggataagagtgtggtgtctctcttttagcggatcctaga 922552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 10396198 - 10396265
Alignment:
Q  139 gacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcatttagtgggtcctaga 206  Q
    |||||||||||||||||||||| |||||| |||||||| | | ||||||||  |||| ||||| ||||    
T  10396198 gacccataaacccattgccttagggttttaggtaagagggtggtgtctctctcttagcgggtcataga 10396265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 10396483 - 10396522
Alignment:
Q  139 gacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  10396483 gacccataaacccattgccttagggttttggataagagtg 10396522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 95
Target Start/End: Complemental strand, 18933134 - 18933103
Alignment:
Q  64 tgttggtttgcaagtgtgagttatatgtccca 95  Q
    ||||||||||||||||||||||||||||||||    
T  18933134 tgttggtttgcaagtgtgagttatatgtccca 18933103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 45484774 - 45484817
Alignment:
Q  127 tataagtaagaggacccataaacccattgccttaaggttttggg 170  Q
    ||||||| |||| ||||||||||||| |||||||||||||||||    
T  45484774 tataagtgagagaacccataaacccaatgccttaaggttttggg 45484817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 59
Target Start/End: Original strand, 5882092 - 5882122
Alignment:
Q  29 cacgatgaattgatggactcacacttgaggg 59  Q
    |||||||||||||||||||||||||||||||    
T  5882092 cacgatgaattgatggactcacacttgaggg 5882122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 11706677 - 11706636
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaa 113  Q
    |||||| ||||||| ||||||||||||||||||||| |||||    
T  11706677 tgcaagggtgagttgtatgtcccacatcggataaaaaagtaa 11706636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 168
Target Start/End: Original strand, 29802604 - 29802637
Alignment:
Q  135 agaggacccataaacccattgccttaaggttttg 168  Q
    |||||||||||||||||| |||||||||||||||    
T  29802604 agaggacccataaacccaatgccttaaggttttg 29802637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 178
Target Start/End: Complemental strand, 11706641 - 11706594
Alignment:
Q  130 aagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    ||||||||||||  |||||| |||||| |||||||||||||||||||||    
T  11706641 aagtaagaggact-ataaactcattgctttaaggttttgggtaagagtg 11706594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 45489864 - 45489792
Alignment:
Q  78 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacc 150  Q
    ||||||||||||||  ||||| |||||||| ||||||| ||||| | | ||||||||||| || || ||||||    
T  45489864 tgtgagttatatgtatcacattggataaaagagtaaagattgaatatcatataagtaagatgatccttaaacc 45489792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 51681604 - 51681644
Alignment:
Q  138 ggacccataaacccattgccttaaggttttgggtaagagtg 178  Q
    |||| |||| ||||||||||||||| |||||||||||||||    
T  51681604 ggactcatatacccattgccttaagattttgggtaagagtg 51681644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 25 - 177
Target Start/End: Complemental strand, 17663 - 17507
Alignment:
Q  25 ggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaac 122  Q
    |||||| ||||||| |||||||||||||||||||||||||||||  || ||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  17663 ggagcatgatgaatagatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcacacatcagataaaatagtaaaggttgaac 17564  T
Q  123 accttataagtaagaggacccataaacccattgccttaagg--ttttgggtaagagt 177  Q
    ||||| ||||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  17563 accttgtaagtaagaggacccataaacccatagccttaaggttttttgggtaagagt 17507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 104; Significance: 5e-52; HSPs: 4)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 1337 - 1159
Alignment:
Q  2 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacat 98  Q
    ||||||||||||| ||| || ||||||||| ||| ||  ||||||||||||||||||||||| ||||| | ||  |||||||||||||||||||||||||    
T  1337 aagtaagagcttccgctcgaagggggagcatgatcaaaagatggactcacacttgagggggaatgttgttgtgtacaagtgtgagttatatgtcccacat 1238  T
Q  99 cggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 177  Q
     |||||||| |||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||    
T  1237 tggataaaagagtaaaggttgaacaccttataagaaaaaggactcataaacccattgccttaaggttttgggtaagagt 1159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 3216 - 3092
Alignment:
Q  2 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacat 98  Q
    ||||||||||||| |||||| ||||||||| ||||| |||||||||||||||||||||||||||||||  || |||| ||||||||||||||||||||||    
T  3216 aagtaagagcttccgcttgaagggggagcatgatgagttgatggactcacacttgagggggagtgttgttgtgtgcaggtgtgagttatatgtcccacat 3117  T
Q  99 cggataaaatagtaaaggttgaaca 123  Q
    ||||||||| |||||||||||||||    
T  3116 cggataaaagagtaaaggttgaaca 3092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 1802 - 1732
Alignment:
Q  119 gaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctc 189  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| | ||||||||    
T  1802 gaacaccttataagtgagaggacccataaacccattgccttaaggtttttggtaagagtgtggtgtctctc 1732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 1509 - 1464
Alignment:
Q  21 agggggagcacgatgaattgatggactcacacttgagggggagtgt 66  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||||    
T  1509 agggggagcatgatgaatcgattgactcacacttgagggggagtgt 1464  T

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Target: scaffold0702 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 367 - 230
Alignment:
Q  5 taagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggat 103  Q
    |||||||||| |||||| ||||||||| |||||||  ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  367 taagagcttccgcttgaagggggagcatgatgaataaatggactcacatttg-gggggagtgttggtttgcaagtgtgagttatatgtcccacatcggat 269  T
Q  104 aaaatagtaaaggttgaacaccttataagtaagaggacc 142  Q
    |||||||||||||||||||||||||||||||||||||||    
T  268 aaaatagtaaaggttgaacaccttataagtaagaggacc 230  T

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Target: scaffold0702; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 670 - 566
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  670 caagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 571  T
Q  174 gagtg 178  Q
    |||||    
T  570 gagtg 566  T

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Target: scaffold0027 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 47360 - 47461
Alignment:
Q  72 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 171  Q
    ||||||||||| ||| ||||| |||||| ||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||| |||||||||    
T  47360 tgcaagtgtgaattaaatgtctcacatccgataaaatagtaaagtttgaacaccttataagtaagagaatccataaacccattgccttaaagttttgggt 47459  T
Q  172 aa 173  Q
    ||    
T  47460 aa 47461  T

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Target: scaffold0504 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 74 - 149
Target Start/End: Complemental strand, 10267 - 10192
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 149  Q
    ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  10267 caagtgtgagttatatgtctcacatcggataaaatggtaaaagttgaacaccttataagtaagaggacccataaac 10192  T

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Target: scaffold0113 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 39771 - 39870
Alignment:
Q  6 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggata 104  Q
    ||||||||| |||||||||| ||||| |||||||||||| |||||||||||||||||| |  | || | |||||||||||||||||||||||||||||||    
T  39771 aagagcttccgcttgaggggtgagcatgatgaattgatgaactcacacttgagggggaattgttgtgttcaagtgtgagttatatgtcccacatcggata 39870  T

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Target: scaffold0113; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 39459 - 39561
Alignment:
Q  74 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 173  Q
    ||||||||||||||||||| |||| || ||| || |||  ||||||||| |||||||||| |||||| | ||||||   ||||||||| |||||||||||    
T  39459 caagtgtgagttatatgtctcaca-cgcatagaaaagtggaggttgaactccttataagtgagaggaactataaacatgttgccttaa-gttttgggtaa 39556  T
Q  174 gagtg 178  Q
     ||||    
T  39557 aagtg 39561  T

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Target: scaffold0807 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 150
Target Start/End: Original strand, 2869 - 2953
Alignment:
Q  66 ttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacc 150  Q
    |||| |||||||| ||||||||| ||  ||||| |  |||||  ||||||||||||||| |||||  |||||||| |||||||||    
T  2869 ttggattgcaagtatgagttataagtttcacattgtttaaaaatgtaaaggttgaacactttatatataagaggatccataaacc 2953  T

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Target: scaffold0088 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 10446 - 10406
Alignment:
Q  110 gtaaaggttgaacaccttataagtaagaggacccataaacc 150  Q
    ||||||||||||||| ||||| ||||||||| |||||||||    
T  10446 gtaaaggttgaacactttatatgtaagaggatccataaacc 10406  T

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