View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9255_low_1 (Length: 363)
Name: NF9255_low_1
Description: NF9255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9255_low_1 |
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Alignment Details
Target: chr4 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 18 - 346
Target Start/End: Original strand, 42668104 - 42668432
Alignment:
| Q |
18 |
acctcatgccttcctaacgtttctaagatgaattttttcacaaagtctatgatatgtgcccactagatactttttaacttcataatagaatcaaattatg |
117 |
Q |
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| T |
42668104 |
acctcatgccttcctaacgtttctaagatgaactttttcacaaagtctatgatatgtgcccactagatactttttaacttcataatagaatcaaattgtg |
42668203 |
T |
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| Q |
118 |
acttatgtattattgtatcatcacacccttcacccgttttagctgtagttccagttatttcaattcaaggcaacatgtttataaatgcaaatatataaat |
217 |
Q |
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| T |
42668204 |
acttatgtattattgtatcatcacacccttcacccgttttagctgtagttccagttatttcaattcaaggcaacatgtttataaatgcaaatatataaat |
42668303 |
T |
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| Q |
218 |
cttattataaatttatgccgacattaatggtgtaatttatttctcataatctaagcttttatagtgacaaaaagttgctgacatatgaagctaaatctag |
317 |
Q |
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| T |
42668304 |
cttattataaatttatgccgacattaatggtgtaatttatttctcataatctaagcttttatagtgacaaaaagttgctgacatatgaagctaaatctag |
42668403 |
T |
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| Q |
318 |
tcttgcaacatctttgaaaacgaagacac |
346 |
Q |
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| T |
42668404 |
tcttgcaacatctttgaaaacgaagacac |
42668432 |
T |
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