View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9255_low_10 (Length: 229)
Name: NF9255_low_10
Description: NF9255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9255_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 37055119 - 37055341
Alignment:
| Q |
1 |
actctttaaaccaagtaaagatctaaacttttcaactataaaaccttgtttctcttcattctcatctaaacctgagattttctgaacctgcttcttttca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37055119 |
actctttaaaccaagtaaagatctaaacttttcaactataaaaccttgtttctcttcattctcatctaaacctgagattttctgaacctgcttcttttca |
37055218 |
T |
|
| Q |
101 |
ttttcttgttctttcatgtaatagttatcttgtaaagtatgaacatggaagcttccagctgcattgattaaagcaccaacactcaaaatgtgagtccttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37055219 |
ttttcttgttctttcatgtaatagttatcttgtaaagtatgaacatggaagcttccagctgcattgattaaagcaccaacactcaaaatgtgagtccttt |
37055318 |
T |
|
| Q |
201 |
gtgatgatgataaaggaaccaag |
223 |
Q |
| |
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||||||||||||||||||||||| |
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|
| T |
37055319 |
gtgatgatgataaaggaaccaag |
37055341 |
T |
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