View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9259_high_10 (Length: 226)
Name: NF9259_high_10
Description: NF9259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9259_high_10 |
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Alignment Details
Target: chr5 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 10 - 207
Target Start/End: Original strand, 30183925 - 30184121
Alignment:
| Q |
10 |
tagattattctaatgcaaaccattttttgaaaagaaattgtcttcagcacatgattggaactctcgatgaattcattttgaacgcatacatatatagtat |
109 |
Q |
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| T |
30183925 |
tagattattataatgtaaaccattttttgaaa-gaaattgtcttcagcacatgattggaactctcgatgaactcattttgaacgcatacatatatagtat |
30184023 |
T |
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| Q |
110 |
atgaatgattggatttcaggagagaacaattcttgtgcacatttattcggatttgaataaatacacaattgttttacaaatgaaagaagattattcct |
207 |
Q |
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| T |
30184024 |
atgaatgattggatttcaagagagaacaattcttgtgcacatttattcggatttgaataaatacacaattgttttacaaatgaaagaagattattcct |
30184121 |
T |
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