View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9259_high_2 (Length: 575)

Name: NF9259_high_2
Description: NF9259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9259_high_2
NF9259_high_2
[»] chr5 (10 HSPs)
chr5 (5-573)||(40402053-40402626)
chr5 (1-46)||(18191889-18191934)
chr5 (1-46)||(31069002-31069047)
chr5 (1-40)||(17037564-17037603)
chr5 (1-46)||(5079104-5079149)
chr5 (1-46)||(9333601-9333646)
chr5 (1-46)||(7410839-7410884)
chr5 (1-46)||(9354429-9354474)
chr5 (1-46)||(12042217-12042262)
chr5 (1-34)||(37233059-37233092)
[»] chr4 (10 HSPs)
chr4 (1-46)||(48464055-48464100)
chr4 (1-40)||(24559035-24559074)
chr4 (1-46)||(47066074-47066119)
chr4 (6-46)||(43600282-43600322)
chr4 (3-46)||(4881111-4881154)
chr4 (8-46)||(1152059-1152097)
chr4 (8-46)||(1684999-1685037)
chr4 (1-46)||(4904180-4904225)
chr4 (1-38)||(53300374-53300411)
chr4 (1-45)||(21539311-21539355)
[»] chr3 (11 HSPs)
chr3 (1-46)||(16457371-16457416)
chr3 (1-40)||(26707880-26707919)
chr3 (2-40)||(5498499-5498537)
chr3 (1-46)||(1627987-1628032)
chr3 (1-46)||(1654591-1654636)
chr3 (1-46)||(2550181-2550226)
chr3 (1-38)||(2943254-2943291)
chr3 (1-46)||(13846007-13846052)
chr3 (1-40)||(1613253-1613292)
chr3 (1-40)||(27259485-27259524)
chr3 (1-46)||(7407794-7407839)
[»] chr8 (14 HSPs)
chr8 (1-45)||(6403609-6403653)
chr8 (1-46)||(5528758-5528803)
chr8 (1-46)||(17634511-17634556)
chr8 (1-46)||(25638822-25638867)
chr8 (1-46)||(28249115-28249160)
chr8 (1-46)||(45356152-45356197)
chr8 (2-46)||(29345446-29345490)
chr8 (1-40)||(6801870-6801909)
chr8 (8-46)||(19369957-19369995)
chr8 (8-46)||(19448463-19448501)
chr8 (8-46)||(19532575-19532613)
chr8 (1-46)||(25637659-25637704)
chr8 (1-46)||(29553644-29553689)
chr8 (1-46)||(31347364-31347409)
[»] chr7 (7 HSPs)
chr7 (1-40)||(26205455-26205494)
chr7 (1-46)||(26225018-26225063)
chr7 (1-46)||(4685443-4685488)
chr7 (1-46)||(9242524-9242569)
chr7 (1-46)||(26619143-26619188)
chr7 (1-46)||(26621131-26621176)
chr7 (1-37)||(26608579-26608615)
[»] chr2 (6 HSPs)
chr2 (1-40)||(11017478-11017517)
chr2 (1-40)||(41573414-41573453)
chr2 (1-46)||(7718200-7718245)
chr2 (1-46)||(30267018-30267063)
chr2 (1-46)||(31342756-31342801)
chr2 (1-46)||(44920973-44921017)
[»] scaffold0576 (1 HSPs)
scaffold0576 (1-46)||(6714-6759)
[»] chr6 (11 HSPs)
chr6 (1-46)||(6684109-6684154)
chr6 (1-46)||(11936807-11936852)
chr6 (1-46)||(11948787-11948832)
chr6 (1-46)||(15361730-15361775)
chr6 (5-46)||(15690453-15690494)
chr6 (1-46)||(16734820-16734865)
chr6 (1-46)||(23264536-23264581)
chr6 (2-46)||(12591848-12591892)
chr6 (1-33)||(29667955-29667987)
chr6 (8-46)||(14669393-14669431)
chr6 (1-46)||(30481268-30481313)
[»] chr1 (11 HSPs)
chr1 (1-46)||(897470-897515)
chr1 (1-46)||(16222793-16222838)
chr1 (1-46)||(28636918-28636963)
chr1 (1-40)||(3399643-3399682)
chr1 (1-40)||(5911704-5911743)
chr1 (1-40)||(12189973-12190012)
chr1 (4-38)||(13208635-13208669)
chr1 (3-40)||(15214348-15214385)
chr1 (1-46)||(37097380-37097425)
chr1 (1-46)||(51758768-51758813)
chr1 (1-37)||(15193943-15193979)


Alignment Details
Target: chr5 (Bit Score: 453; Significance: 0; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 453; E-Value: 0
Query Start/End: Original strand, 5 - 573
Target Start/End: Original strand, 40402053 - 40402626
Alignment:
Q  5 actaaatttaattagtaacatttttctttatttagtcacaatgttgcagtgattagaccctc---ctttgtacaaataaaagagacatgataaattaatt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  40402053 actaaatttaattagtaacatttttctttatttagtcacaatgttgtagtgattagaccctcctcctttgtacaaataaaagagacatgataaattaatt 40402152  T
Q  102 aaagatgaagaacctgaattaatttgaaagtttaattacagagtataaataaatctaaaattgcaaatgaaggaataattggaagtaaaactacatttga 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40402153 aaagatgaagaacctgaattaatttgaaagtttaattacagagtataaataaatctaaaattgcaaatgaaggaataattgaaagtaaaactacatttga 40402252  T
Q  202 agacaatgttctagagagagcttctctgccttcattctggaaaccccaccactcgctcttaacaaactgccgtcaccaccaagctcttgttctcccacat 301  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40402253 agacaatgttctagagagagcttctctgccttcattctgaaaaccccaccactcgctcttaacaaactgccgtcaccaccaagctcttgttctcccacat 40402352  T
Q  302 catccaaacactattcaacaagatgtagccacggtgttagtggtgca-tttcctcaccgtcgtaccaccttaaaccccattgaagtgacaactaatccaa 400  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40402353 catccaaacactattcagcaagatgtagccacggtgttagtggtgcattttcctcaccgtcgtaccaccttaaaccccattgaagtgacaaataatccaa 40402452  T
Q  401 atctcgaagtagttggctagcactaaatttaatgagctcctctatcaacattgnnnnnnnnnnnnnnnnnggagaacaagagagtttaagcccaaagcag 500  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||                 |||||||| ||||||||||||||||||| |    
T  40402453 atctcgaagtagttggctcgcactaaatttaatgagctcctctatcaacattgtttttttttttttttttggagaacatgagagtttaagcccaaagcgg 40402552  T
Q  501 -aaactaactcctgattaaacgaggtgtagaaacaccaatactattagctaaaaataattaactaactcgaaca 573  Q
     |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40402553 aaaactaactcctaattaaacgaggtgtagaaacatcaatactattagctaaaaataattaactaactcgaaca 40402626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18191889 - 18191934
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||    
T  18191889 tgttactaaatttaattagtaacatttttcttaatttagttacaat 18191934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31069002 - 31069047
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||    
T  31069002 tgttactaaatttaattagtaacatttttcttgatttagttacaat 31069047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 17037603 - 17037564
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagt 40  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  17037603 tgttactaaatttaattagtaacatttttcttgatttagt 17037564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5079104 - 5079149
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||    
T  5079104 tgttgctaaatttaattagtaacatttttcttgatttagttacaat 5079149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9333601 - 9333646
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||||||||||||||||||||||||||||||| |||| || |||||    
T  9333601 tgttactaaatttaattagtaacatttttcttgattttgttacaat 9333646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7410884 - 7410839
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| |||||||||||||||||||||||| || ||||||| |||||    
T  7410884 tgttgctaaatttaattagtaacattttttttgatttagttacaat 7410839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9354429 - 9354474
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    ||||| |||||||||||||||||||||||||| ||| ||| |||||    
T  9354429 tgttattaaatttaattagtaacatttttcttgattcagttacaat 9354474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12042217 - 12042262
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||||||||||| ||| ||||||||||||||| ||||||| |||||    
T  12042217 tgttactaaattgaatcagtaacatttttcttgatttagttacaat 12042262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 37233092 - 37233059
Alignment:
Q  1 tgttactaaatttaattagtaacatttttcttta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  37233092 tgttactaaatttaattagtaacttttttcttta 37233059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 48464100 - 48464055
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||    
T  48464100 tgttactaaatttaattagtaacatttttatttatttagtaacaat 48464055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 24559035 - 24559074
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagt 40  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  24559035 tgttactaaatttaattagtaacatttttcttgatttagt 24559074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 47066074 - 47066119
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||||||||||||||||| ||||||||||||| ||||||| |||||    
T  47066074 tgttactaaatttaattactaacatttttcttgatttagttacaat 47066119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 43600322 - 43600282
Alignment:
Q  6 ctaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  43600322 ctaaatttaattagtaacatttttcttgatttagttacaat 43600282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 4881111 - 4881154
Alignment:
Q  3 ttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||||||||||||| ||||||||||||||| ||||||| |||||    
T  4881111 ttactaaatttaatcagtaacatttttcttgatttagtaacaat 4881154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 1152097 - 1152059
Alignment:
Q  8 aaatttaattagtaacatttttctttatttagtcacaat 46  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  1152097 aaatttaattagtaacatttttcttaatttagttacaat 1152059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 1684999 - 1685037
Alignment:
Q  8 aaatttaattagtaacatttttctttatttagtcacaat 46  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  1684999 aaatttaattagtaacatttttcttgatttagttacaat 1685037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4904180 - 4904225
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||||||||||||||| ||||||||||||| | ||||||| |||||    
T  4904180 tgttactaaatttaatcagtaacatttttcatgatttagtaacaat 4904225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 53300411 - 53300374
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttattta 38  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  53300411 tgttactaaatttaattactaacatttttcttgattta 53300374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21539311 - 21539355
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaa 45  Q
    |||||||||||||||| ||||||||||| ||| ||||||| ||||    
T  21539311 tgttactaaatttaatcagtaacattttccttgatttagttacaa 21539355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16457371 - 16457416
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||    
T  16457371 tgttactaaatttaattagtaacatttttcttgatttagttacaat 16457416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 26707919 - 26707880
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagt 40  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  26707919 tgttactaaatttaattagtaacatttttcttgatttagt 26707880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 5498537 - 5498499
Alignment:
Q  2 gttactaaatttaattagtaacatttttctttatttagt 40  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  5498537 gttactaaatttaattagtaacatttttcttgatttagt 5498499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1627987 - 1628032
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||||||||||||||||||||| ||||||||| ||||||| |||||    
T  1627987 tgttactaaatttaattagtaatatttttcttgatttagttacaat 1628032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1654636 - 1654591
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||    
T  1654636 tgttgctaaatttaattagtaacatttttcttgatttagttacaat 1654591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2550226 - 2550181
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||    
T  2550226 tgttgctaaatttaattagtaacatttttcttgatttagttacaat 2550181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 2943254 - 2943291
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttattta 38  Q
    |||||||||||||||||||||||||||||||| |||||    
T  2943254 tgttactaaatttaattagtaacatttttcttgattta 2943291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 13846052 - 13846007
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||    
T  13846052 tgttgctaaatttaattagtaacatttttcttgatttagttacaat 13846007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 1613253 - 1613292
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagt 40  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  1613253 tgttactaaatttatttagtaacatttttcttgatttagt 1613292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 27259485 - 27259524
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagt 40  Q
    |||||||||||||||||||||||||||| ||| |||||||    
T  27259485 tgttactaaatttaattagtaacattttgcttgatttagt 27259524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7407794 - 7407839
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||||||||| ||||||||| ||||||| |||||    
T  7407794 tgttgctaaatttaattagtaatatttttcttgatttagttacaat 7407839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6403653 - 6403609
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaa 45  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||    
T  6403653 tgttactaaatttaattagtaacatttttcttaatttagttacaa 6403609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 5528803 - 5528758
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||    
T  5528803 tgttgctaaatttaattagtaacatttttcttgatttagttacaat 5528758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17634511 - 17634556
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    ||||| |||||||||||||||||||||||||| ||||||| |||||    
T  17634511 tgttattaaatttaattagtaacatttttcttgatttagttacaat 17634556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25638867 - 25638822
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||    
T  25638867 tgttgctaaatttaattagtaacatttttcttgatttagttacaat 25638822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28249115 - 28249160
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||    
T  28249115 tgttgctaaatttaattagtaacatttttcttgatttagttacaat 28249160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 45356152 - 45356197
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||    
T  45356152 tgttgctaaatttaattagtaacatttttcttgatttagttacaat 45356197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 29345490 - 29345446
Alignment:
Q  2 gttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    ||||||||||||||||||||| ||||||||| ||||||| |||||    
T  29345490 gttactaaatttaattagtaatatttttcttgatttagttacaat 29345446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 6801870 - 6801909
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagt 40  Q
    ||||||||||||||||||||||||||||| || |||||||    
T  6801870 tgttactaaatttaattagtaacatttttattgatttagt 6801909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 19369957 - 19369995
Alignment:
Q  8 aaatttaattagtaacatttttctttatttagtcacaat 46  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  19369957 aaatttaattagtaacatttttcttgatttagttacaat 19369995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 19448501 - 19448463
Alignment:
Q  8 aaatttaattagtaacatttttctttatttagtcacaat 46  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  19448501 aaatttaattagtaacatttttcttgatttagttacaat 19448463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 19532575 - 19532613
Alignment:
Q  8 aaatttaattagtaacatttttctttatttagtcacaat 46  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  19532575 aaatttaattagtaacatttttcttgatttagttacaat 19532613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25637704 - 25637659
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||||||||||| ||||||| ||||||| |||||    
T  25637704 tgttgctaaatttaattagtaacagttttcttaatttagttacaat 25637659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29553689 - 29553644
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||||||||||||||||||| |||| || |||||    
T  29553689 tgttgctaaatttaattagtaacatttttcttgatttggttacaat 29553644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31347409 - 31347364
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    ||||||||||||||||||||| |||||||||| |||| || |||||    
T  31347409 tgttactaaatttaattagtagcatttttcttgatttggttacaat 31347364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000005; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 26205455 - 26205494
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagt 40  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  26205455 tgttactaaatttaattagtaacatttttcttgatttagt 26205494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26225018 - 26225063
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    ||||||||||||||||||||| |||||||||| ||||||| |||||    
T  26225018 tgttactaaatttaattagtatcatttttcttgatttagttacaat 26225063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4685443 - 4685488
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||||| ||||||||||||| ||||||| |||||    
T  4685443 tgttgctaaatttaattactaacatttttcttgatttagttacaat 4685488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9242524 - 9242569
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||||| ||||||||||||||||| ||||||| ||||||| |||||    
T  9242524 tgttacaaaatttaattagtaacaattttcttgatttagttacaat 9242569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26619143 - 26619188
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    ||||| |||||||||| ||||||||||||||| ||||||| |||||    
T  26619143 tgttaataaatttaatcagtaacatttttcttgatttagtaacaat 26619188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26621131 - 26621176
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||| ||||||||||||||| ||||||| |||||    
T  26621131 tgttgctaaatttaatcagtaacatttttcttaatttagtaacaat 26621176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 26608579 - 26608615
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttattt 37  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  26608579 tgttactaaatttaatcagtaacatttttcttgattt 26608615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000005; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 11017517 - 11017478
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagt 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  11017517 tgttactaaatttaattagtaacaattttctttatttagt 11017478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 41573453 - 41573414
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagt 40  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  41573453 tgttactaaatttaattagtaacatttttcttgatttagt 41573414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7718245 - 7718200
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||||||||||||||||||||| ||||||||| ||||||| |||||    
T  7718245 tgttactaaatttaattagtaatatttttcttgatttagttacaat 7718200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 30267063 - 30267018
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||||||||||||||||| ||||||||||||| ||||||| |||||    
T  30267063 tgttactaaatttaattactaacatttttcttgatttagttacaat 30267018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31342756 - 31342801
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||    
T  31342756 tgttgctaaatttaattagtaacatttttcttgatttagttacaat 31342801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 44921017 - 44920973
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    ||||||||||||||||||||||||||||| || ||||||| |||||    
T  44921017 tgttactaaatttaattagtaacattttt-ttgatttagttacaat 44920973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6759 - 6714
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||    
T  6759 tgttgctaaatttaattagtaacatttttcttgatttagttacaat 6714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000008; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6684154 - 6684109
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||||||||||||||||||||||||||||||| ||| ||| |||||    
T  6684154 tgttactaaatttaattagtaacatttttcttgattaagttacaat 6684109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11936807 - 11936852
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||    
T  11936807 tgttgctaaatttaattagtaacatttttcttgatttagttacaat 11936852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11948787 - 11948832
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||    
T  11948787 tgttgctaaatttaattagtaacatttttcttgatttagttacaat 11948832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 15361775 - 15361730
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||    
T  15361775 tgttgctaaatttaattagtaacatttttcttgatttagttacaat 15361730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 15690494 - 15690453
Alignment:
Q  5 actaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||||||||||||||||||||||||||| ||||||| |||||    
T  15690494 actaaatttaattagtaacatttttcttgatttagttacaat 15690453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16734865 - 16734820
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||    
T  16734865 tgttgctaaatttaattagtaacatttttcttgatttagttacaat 16734820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23264536 - 23264581
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||||    
T  23264536 tgttactaaatttaattagtaacaattttcttgatttagtaacaat 23264581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 12591892 - 12591848
Alignment:
Q  2 gttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||    
T  12591892 gttactaaatttaattactaacatttttcttgatttagttacaat 12591848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 29667955 - 29667987
Alignment:
Q  1 tgttactaaatttaattagtaacatttttcttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  29667955 tgttactaaatttaattagtaacatttttcttt 29667987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 14669393 - 14669431
Alignment:
Q  8 aaatttaattagtaacatttttctttatttagtcacaat 46  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  14669393 aaatttaattagtaacatttttcttgatttagttacaat 14669431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30481268 - 30481313
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||||||| |||||||||| |||||||||||| ||||||| |||||    
T  30481268 tgttactagatttaattagcaacatttttcttgatttagtaacaat 30481313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000008; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 897515 - 897470
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||    
T  897515 tgttactaaatttaattaggaacatttttcttcatttagtaacaat 897470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16222838 - 16222793
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    ||||||||||||| |||||||||||||||||| ||||||| |||||    
T  16222838 tgttactaaattttattagtaacatttttcttgatttagttacaat 16222793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28636963 - 28636918
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||||||||||| ||||||||||||||||||| ||||||| |||||    
T  28636963 tgttactaaattgaattagtaacatttttcttgatttagttacaat 28636918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 3399682 - 3399643
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagt 40  Q
    |||||||||||||||||||||||||||||| | |||||||    
T  3399682 tgttactaaatttaattagtaacatttttcatgatttagt 3399643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 5911704 - 5911743
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagt 40  Q
    |||||||||||||||| ||||||||||||||| |||||||    
T  5911704 tgttactaaatttaatcagtaacatttttcttgatttagt 5911743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12190012 - 12189973
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagt 40  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  12190012 tgttactaaatttaattagtaatatttttcttgatttagt 12189973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 13208669 - 13208635
Alignment:
Q  4 tactaaatttaattagtaacatttttctttattta 38  Q
    ||||||||||||||||||||||||||||| |||||    
T  13208669 tactaaatttaattagtaacatttttcttaattta 13208635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 15214385 - 15214348
Alignment:
Q  3 ttactaaatttaattagtaacatttttctttatttagt 40  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  15214385 ttactaaatttaattagtaaaatttttcttgatttagt 15214348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 37097380 - 37097425
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    ||||||||||||| || ||||||||||||||| ||||||| |||||    
T  37097380 tgttactaaattttatcagtaacatttttcttgatttagttacaat 37097425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 51758813 - 51758768
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttatttagtcacaat 46  Q
    |||| ||||||||||||| ||||||||||||| ||||||| |||||    
T  51758813 tgttgctaaatttaattactaacatttttcttgatttagttacaat 51758768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 15193979 - 15193943
Alignment:
Q  1 tgttactaaatttaattagtaacatttttctttattt 37  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  15193979 tgttaataaatttaattagtaacatttttcttgattt 15193943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University