View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9261_high_24 (Length: 262)

Name: NF9261_high_24
Description: NF9261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9261_high_24
NF9261_high_24
[»] chr3 (31 HSPs)
chr3 (1-180)||(24483740-24483931)
chr3 (1-141)||(31270253-31270393)
chr3 (1-140)||(31462808-31462947)
chr3 (1-140)||(14585387-14585529)
chr3 (1-140)||(40013334-40013475)
chr3 (1-107)||(13702034-13702140)
chr3 (1-129)||(35174643-35174771)
chr3 (1-115)||(53155492-53155603)
chr3 (1-126)||(27189456-27189580)
chr3 (1-85)||(11819066-11819150)
chr3 (1-85)||(36691861-36691945)
chr3 (1-107)||(3456904-3457010)
chr3 (1-107)||(32080816-32080922)
chr3 (1-107)||(48400860-48400966)
chr3 (1-107)||(48652502-48652608)
chr3 (1-85)||(30156344-30156427)
chr3 (1-104)||(49628149-49628253)
chr3 (1-72)||(22484961-22485032)
chr3 (7-129)||(53402568-53402691)
chr3 (1-74)||(34960920-34960993)
chr3 (1-58)||(54239080-54239137)
chr3 (1-107)||(4206573-4206679)
chr3 (1-129)||(36624756-36624881)
chr3 (8-107)||(1074962-1075061)
chr3 (1-141)||(39610131-39610279)
chr3 (1-108)||(55090645-55090752)
chr3 (1-95)||(38527236-38527330)
chr3 (1-85)||(19645204-19645288)
chr3 (4-85)||(40883933-40884015)
chr3 (1-39)||(41868356-41868394)
chr3 (1-58)||(4817892-4817949)
[»] chr7 (36 HSPs)
chr7 (1-140)||(5684293-5684432)
chr7 (1-140)||(5709343-5709482)
chr7 (1-107)||(42603823-42603929)
chr7 (1-140)||(17473777-17473916)
chr7 (1-140)||(17579298-17579437)
chr7 (1-129)||(45457610-45457741)
chr7 (1-140)||(17509258-17509399)
chr7 (1-140)||(17543815-17543956)
chr7 (1-129)||(1281191-1281322)
chr7 (1-129)||(27535395-27535523)
chr7 (1-85)||(9785300-9785384)
chr7 (1-107)||(21603424-21603529)
chr7 (1-107)||(46026083-46026189)
chr7 (1-85)||(28664966-28665050)
chr7 (5-109)||(48304453-48304557)
chr7 (1-140)||(6667321-6667463)
chr7 (1-107)||(32740714-32740820)
chr7 (1-107)||(36579366-36579472)
chr7 (1-107)||(39533029-39533134)
chr7 (1-107)||(42644637-42644743)
chr7 (1-140)||(11832943-11833086)
chr7 (5-75)||(2622585-2622655)
chr7 (1-107)||(10574342-10574448)
chr7 (1-85)||(21990644-21990729)
chr7 (5-88)||(4621425-4621508)
chr7 (1-84)||(45482048-45482131)
chr7 (1-74)||(24320277-24320350)
chr7 (1-49)||(10094460-10094508)
chr7 (1-85)||(22747562-22747645)
chr7 (1-107)||(41287918-41288025)
chr7 (1-47)||(15674666-15674712)
chr7 (63-129)||(15674741-15674807)
chr7 (1-55)||(43847083-43847137)
chr7 (6-85)||(21954878-21954956)
chr7 (1-58)||(14657877-14657934)
chr7 (1-49)||(9720028-9720076)
[»] chr2 (34 HSPs)
chr2 (1-140)||(12704615-12704754)
chr2 (3-108)||(43474184-43474289)
chr2 (1-129)||(5754227-5754355)
chr2 (1-140)||(31908870-31909009)
chr2 (1-140)||(36867936-36868075)
chr2 (1-107)||(11937912-11938019)
chr2 (1-104)||(25067816-25067919)
chr2 (1-107)||(15919835-15919941)
chr2 (1-107)||(33012038-33012144)
chr2 (1-107)||(38535359-38535465)
chr2 (1-85)||(27095688-27095772)
chr2 (1-113)||(44942240-44942352)
chr2 (1-116)||(35333457-35333572)
chr2 (3-109)||(7073004-7073110)
chr2 (1-107)||(9690027-9690133)
chr2 (1-140)||(22597061-22597202)
chr2 (1-85)||(20561186-20561270)
chr2 (1-95)||(18089446-18089540)
chr2 (5-70)||(13740718-13740783)
chr2 (1-74)||(17268178-17268251)
chr2 (1-107)||(32015181-32015291)
chr2 (1-74)||(34416815-34416888)
chr2 (1-129)||(9978723-9978851)
chr2 (1-121)||(34470912-34471033)
chr2 (20-107)||(28261966-28262055)
chr2 (1-74)||(10287060-10287132)
chr2 (1-58)||(28231151-28231208)
chr2 (2-107)||(38384497-38384602)
chr2 (2-140)||(34963121-34963261)
chr2 (1-74)||(4604361-4604434)
chr2 (1-74)||(4732065-4732138)
chr2 (1-49)||(32314461-32314509)
chr2 (1-48)||(4426712-4426759)
chr2 (6-85)||(17767611-17767689)
[»] chr4 (42 HSPs)
chr4 (1-140)||(22757022-22757161)
chr4 (1-129)||(43244435-43244563)
chr4 (2-129)||(394329-394450)
chr4 (1-140)||(31521910-31522049)
chr4 (1-107)||(24568767-24568873)
chr4 (1-107)||(26742517-26742623)
chr4 (5-140)||(20399961-20400099)
chr4 (1-140)||(39837522-39837662)
chr4 (1-107)||(24100099-24100206)
chr4 (1-83)||(13965545-13965627)
chr4 (1-74)||(7060318-7060391)
chr4 (1-141)||(29922761-29922904)
chr4 (1-129)||(7083870-7083997)
chr4 (1-140)||(25658092-25658234)
chr4 (1-108)||(6911640-6911747)
chr4 (1-128)||(26674309-26674439)
chr4 (1-107)||(8712491-8712597)
chr4 (1-107)||(11210367-11210473)
chr4 (1-107)||(24825610-24825716)
chr4 (1-140)||(478066-478201)
chr4 (1-74)||(44757096-44757169)
chr4 (1-74)||(51152119-51152192)
chr4 (7-107)||(27394791-27394891)
chr4 (6-85)||(22049464-22049542)
chr4 (6-109)||(12717177-12717281)
chr4 (1-74)||(29268831-29268904)
chr4 (1-74)||(38944201-38944274)
chr4 (1-54)||(43493341-43493394)
chr4 (1-85)||(7861259-7861343)
chr4 (1-107)||(7084167-7084273)
chr4 (1-105)||(5814310-5814414)
chr4 (2-74)||(20887810-20887882)
chr4 (8-71)||(626609-626671)
chr4 (1-107)||(30201999-30202105)
chr4 (1-58)||(2447810-2447867)
chr4 (1-73)||(19745384-19745456)
chr4 (1-73)||(19794350-19794422)
chr4 (7-58)||(3159052-3159103)
chr4 (1-48)||(50801237-50801284)
chr4 (2-44)||(39523433-39523475)
chr4 (1-58)||(6881966-6882023)
chr4 (1-49)||(13586295-13586343)
[»] chr5 (28 HSPs)
chr5 (2-140)||(17699481-17699619)
chr5 (1-107)||(17331289-17331395)
chr5 (1-130)||(28040567-28040696)
chr5 (5-109)||(12439692-12439795)
chr5 (1-129)||(32347768-32347899)
chr5 (1-141)||(17096293-17096433)
chr5 (1-132)||(43493808-43493939)
chr5 (7-107)||(26295118-26295218)
chr5 (1-140)||(29097717-29097856)
chr5 (1-107)||(6281005-6281111)
chr5 (1-107)||(33164522-33164628)
chr5 (1-87)||(42609125-42609211)
chr5 (1-72)||(6635245-6635317)
chr5 (29-127)||(7771888-7771983)
chr5 (1-73)||(27241059-27241131)
chr5 (1-108)||(981079-981186)
chr5 (1-83)||(34431045-34431127)
chr5 (1-107)||(20483147-20483253)
chr5 (1-87)||(178160-178246)
chr5 (1-107)||(3740319-3740424)
chr5 (1-58)||(39179882-39179939)
chr5 (1-55)||(3079359-3079413)
chr5 (1-58)||(17687215-17687272)
chr5 (1-74)||(39531457-39531528)
chr5 (1-74)||(42396566-42396639)
chr5 (1-85)||(6681928-6682012)
chr5 (1-85)||(23882170-23882254)
chr5 (35-84)||(23428226-23428275)
[»] chr6 (16 HSPs)
chr6 (1-129)||(15590133-15590261)
chr6 (1-140)||(8693711-8693853)
chr6 (1-104)||(21507862-21507965)
chr6 (1-107)||(23654211-23654317)
chr6 (1-85)||(31937473-31937556)
chr6 (1-107)||(6419912-6420018)
chr6 (1-107)||(12481424-12481530)
chr6 (1-83)||(14783225-14783307)
chr6 (24-140)||(4084945-4085062)
chr6 (1-109)||(6296303-6296414)
chr6 (1-109)||(6303113-6303224)
chr6 (1-140)||(2304864-2305003)
chr6 (1-107)||(19402862-19402968)
chr6 (1-107)||(35219958-35220063)
chr6 (1-39)||(4921935-4921973)
chr6 (1-50)||(23638172-23638221)
[»] chr1 (26 HSPs)
chr1 (1-107)||(28678184-28678290)
chr1 (1-107)||(7995614-7995721)
chr1 (1-107)||(424345-424451)
chr1 (5-107)||(33487088-33487190)
chr1 (1-107)||(42490854-42490960)
chr1 (5-140)||(29205210-29205348)
chr1 (1-85)||(32784091-32784175)
chr1 (1-107)||(4882413-4882519)
chr1 (1-129)||(42276299-42276423)
chr1 (1-85)||(12871604-12871688)
chr1 (1-109)||(20411532-20411640)
chr1 (1-73)||(37822399-37822471)
chr1 (1-107)||(3232749-3232855)
chr1 (1-58)||(44517157-44517214)
chr1 (1-85)||(14265267-14265351)
chr1 (1-107)||(4871080-4871186)
chr1 (1-107)||(27534660-27534766)
chr1 (1-108)||(13488590-13488699)
chr1 (2-83)||(17347584-17347664)
chr1 (1-107)||(18343575-18343681)
chr1 (6-88)||(33125865-33125946)
chr1 (27-125)||(33939082-33939180)
chr1 (13-73)||(15791554-15791614)
chr1 (1-39)||(45193680-45193718)
chr1 (1-107)||(45750439-45750545)
chr1 (1-58)||(10627010-10627067)
[»] chr8 (25 HSPs)
chr8 (1-129)||(24791230-24791358)
chr8 (1-140)||(9501517-9501657)
chr8 (1-109)||(37612612-37612720)
chr8 (1-107)||(31407810-31407916)
chr8 (2-128)||(1810283-1810405)
chr8 (1-107)||(31202419-31202525)
chr8 (1-74)||(10338884-10338957)
chr8 (1-85)||(12329609-12329693)
chr8 (1-85)||(30026942-30027026)
chr8 (1-107)||(14600760-14600866)
chr8 (1-107)||(39067751-39067857)
chr8 (1-74)||(41361726-41361799)
chr8 (2-108)||(2025272-2025378)
chr8 (1-107)||(23971156-23971262)
chr8 (1-109)||(1039955-1040062)
chr8 (1-85)||(13570788-13570872)
chr8 (1-107)||(10147907-10148014)
chr8 (1-71)||(2234532-2234602)
chr8 (2-107)||(11161843-11161948)
chr8 (1-53)||(37128548-37128600)
chr8 (1-48)||(31308168-31308215)
chr8 (1-83)||(3204818-3204899)
chr8 (1-42)||(4757191-4757232)
chr8 (6-58)||(7281655-7281707)
chr8 (6-74)||(30039399-30039466)
[»] scaffold0536 (1 HSPs)
scaffold0536 (1-141)||(2830-2969)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-88)||(35062-35149)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-84)||(74148-74231)
[»] scaffold0312 (1 HSPs)
scaffold0312 (1-107)||(6098-6204)
[»] scaffold0432 (1 HSPs)
scaffold0432 (1-129)||(2471-2600)
[»] scaffold1379 (2 HSPs)
scaffold1379 (1-74)||(1140-1213)
scaffold1379 (1-42)||(1-42)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-68)||(7178-7245)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-74)||(404312-404385)
[»] scaffold0121 (1 HSPs)
scaffold0121 (2-107)||(13300-13411)
[»] scaffold1350 (1 HSPs)
scaffold1350 (1-37)||(1605-1641)


Alignment Details
Target: chr3 (Bit Score: 107; Significance: 1e-53; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 24483740 - 24483931
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctca---------- 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||              
T  24483740 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcagatgggtgatttgtgtgtcaaaattgactccaaatcacctctcagaaaagaaga 24483839  T
Q  91 --aaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaaaccaattataaaaagttgttggcatacattaatcaaatag 180  Q
      || || ||||||||||||| ||||||||||||||||||| ||  | |||||||||||||||||| |||||||||| ||||||||||||||    
T  24483840 agaagaagaagaagaagaaaagggtgacaactagggtttgagaatgatagaaaccaattataaaaaattgttggcatgcattaatcaaatag 24483931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 31270393 - 31270253
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||| | ||||||||| || |||||||||||| | ||||||||  || ||||| || |    
T  31270393 tatgtgaaatcacttattcaattaggatagaaggaaaaataattcgaaggggtgatttttgggtcaaaattgaccctaaatcacccatctaaaaagaata 31270294  T
Q  101 agaagaaaatggtgacaactagggtttgaaaagaagagaaa 141  Q
    ||||||||||||||||| ||||| ||||||||| |||||||    
T  31270293 agaagaaaatggtgacatctaggatttgaaaaggagagaaa 31270253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 31462808 - 31462947
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||| |||||||||||||||||| |||| || ||||||||||||| | ||||||||| || |||||||||||| | |||||||| |||  |||| ||||    
T  31462808 tatgtaaaatcacttattcaattaggatataaggaaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatcacccctctgaaaagaaga 31462907  T
Q  101 agaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    ||||||||||||||||| | | ||||||| ||| ||||||    
T  31462908 agaagaaaatggtgacagccaaggtttgagaaggagagaa 31462947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 14585529 - 14585387
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctc---aaaaaaca 97  Q
    |||||||||||||||||||||||| ||||||| |||||||||||  || | ||||||| || |||||||||||||| |||||||| |||   ||| || |    
T  14585529 tatgtgaaatcacttattcaattaggatagaaggaaaaacaatttagaggagtgatttttgggtcaaaattgactctaaatcacccctctgaaaagaaga 14585430  T
Q  98 agaagaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    ||| |||||||| || ||| |||||||||||| ||| ||||||    
T  14585429 agacgaagaaaagggcgacgactagggtttgagaaggagagaa 14585387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 40013334 - 40013475
Alignment:
Q  1 tatgtgaaatcacttattcaattatga---tagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaaca 97  Q
    |||||||||||||||||||||||| ||   ||||| ||||||||||||| | ||||||||| || |||||||||||| | ||||||||  ||  |||| |    
T  40013334 tatgtgaaatcacttattcaattaggaggatagaaggaaaaacaattcgaatgggtgatttttgggtcaaaattgacactaaatcacc-atctgaaaaga 40013432  T
Q  98 agaagaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    ||||||||||||||||||| |||| ||||||| ||| ||||||    
T  40013433 agaagaagaaaatggtgacgactatggtttgagaaggagagaa 40013475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 13702034 - 13702140
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| | |||||| || || |||||||||||| | |||||||| |||  |||| ||||    
T  13702034 tatgtgaaatcacttattcaattatgatagaaagaaaaataattcgaaggggtgacttttgggtcaaaattgaccctaaatcacccctctgaaaagaaga 13702133  T
Q  101 agaagaa 107  Q
    |||||||    
T  13702134 agaagaa 13702140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 35174771 - 35174643
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||  | ||||||||| || ||| |||||||| |  ||| ||| ||   |||| ||||    
T  35174771 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcaaaggggtgatttttgggtcgaaattgacccttaataacccctatgaaaagaaga 35174672  T
Q  101 agaagaaaatggtgacaactagggtttga 129  Q
    ||||||||| |||||| ||||||||||||    
T  35174671 agaagaaaagggtgacgactagggtttga 35174643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 53155492 - 53155603
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||| ||||| |||| || ||||||||||||| | ||||||||| || |||||||||||| | |||||||| ||| |||   ||||    
T  53155492 tatgtgaaatcacttattgaattaggatataaggaaaaacaattcgaatgggtgatttttgggtcaaaattgaccctaaatcacccctctaaa---aaga 53155588  T
Q  101 agaagaaaatggtga 115  Q
    |||||||||||||||    
T  53155589 agaagaaaatggtga 53155603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 27189456 - 27189580
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||||||||| || |||| ||  ||||||||||||| |||||||| ||| | |||  |||    
T  27189456 tatgtgaaattacttattcaattaggatagaaggaaaaacaattcggaagagtaatttttggatcaaaattgactctaaatcacccctctacaaa-gaga 27189554  T
Q  101 agaagaaaatggtgacaactagggtt 126  Q
    ||||||||  ||||||  ||||||||    
T  27189555 agaagaaaggggtgacggctagggtt 27189580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 11819150 - 11819066
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    |||||||||||||||||||||||| | ||||| ||||||||| ||||| ||||||||| || |||||||||||| | ||||||||    
T  11819150 tatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacc 11819066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 36691861 - 36691945
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    |||||||||||||||||||||||| ||||||| |||||| || ||||| ||||||||| || |||||||||||| | ||||||||    
T  36691861 tatgtgaaatcacttattcaattaggatagaaggaaaaataactcggaggggtgatttttgggtcaaaattgaccctaaatcacc 36691945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 3457010 - 3456904
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||| |||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||  |||||||||||   |||||||| |||  |||| ||||    
T  3457010 tatgttaaatcacttattcaattaggatagaaggaaaaacaattcggagaggtgatttttggatcaaaattgaccataaatcacccctctgaaaagaaga 3456911  T
Q  101 agaagaa 107  Q
    |||||||    
T  3456910 agaagaa 3456904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 32080816 - 32080922
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||||||||||| |||||||||| | ||||| ||||||||| ||||| ||||||||| || |||||||||||| | ||||||||  ||  | |||||||    
T  32080816 tatgtgaaatcacctattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacccatctgacaacaaga 32080915  T
Q  101 agaagaa 107  Q
    |||||||    
T  32080916 agaagaa 32080922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 48400966 - 48400860
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||| || || | ||||| |||||||||||| || | ||||||| || |||||||||||| | |||||||| ||| ||||| ||||    
T  48400966 tatgtgaaatcacttattaaaatagggtagaaggaaaaacaattccgatgtgtgatttttgggtcaaaattgaccctaaatcacccctctaaaaagaaga 48400867  T
Q  101 agaagaa 107  Q
    |||||||    
T  48400866 agaagaa 48400860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 48652502 - 48652608
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| | ||||| ||||||||| ||||| ||||||||| || |||||| ||||| | |||||||| |||  | || ||||    
T  48652502 tatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaagttgaccctaaatcacccctctgacaagaaga 48652601  T
Q  101 agaagaa 107  Q
    |||||||    
T  48652602 agaagaa 48652608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 30156344 - 30156427
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    |||||||||||||||||||||||| |||| || ||||| ||||||||| ||||||||| || |||||||||||| | ||||||||    
T  30156344 tatgtgaaatcacttattcaattaggataaaaggaaaa-caattcggaggggtgatttttgggtcaaaattgaccctaaatcacc 30156427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 49628149 - 49628253
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactc-caaatcacctctcaaaaaacaag 99  Q
    ||||||||||||||||||||| || ||||||| |||||||||||| || ||||||||| |  |||||||||||| |  |||||||| ||| ||||| |||    
T  49628149 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcagaggggtgatttttaggtcaaaattgacccaaaaatcacccctctaaaaagaag 49628248  T
Q  100 aagaa 104  Q
    |||||    
T  49628249 aagaa 49628253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 22485032 - 22484961
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattg 72  Q
    |||| ||||||||||||||||||| ||||||| |||||||||| |||||| ||||||| || ||||||||||    
T  22485032 tatgcgaaatcacttattcaattaggatagaaggaaaaacaatccggaagagtgatttttgggtcaaaattg 22484961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 129
Target Start/End: Complemental strand, 53402691 - 53402568
Alignment:
Q  7 aaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaaga 106  Q
    |||||||||||| |||||  |||||| ||||||||||||||| ||||||||| || ||||||||||||   |||||||   |  ||||| ||||||||||    
T  53402691 aaatcacttattgaattagaatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgaccttaaatcactcatttaaaaagaagaagaaga 53402592  T
Q  107 aaa-tggtgacaactagggtttga 129  Q
    |||  |||||| ||||||||||||    
T  53402591 aaaggggtgacgactagggtttga 53402568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 34960920 - 34960993
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    ||||||||||||||||||||||||  ||||||  ||||||||||| || ||||||||| || ||||||||||||    
T  34960920 tatgtgaaatcacttattcaattagaatagaagaaaaaacaattctgaggggtgatttttgggtcaaaattgac 34960993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 54239080 - 54239137
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 58  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||||    
T  54239080 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgtgtgattt 54239137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 4206573 - 4206679
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||||||| |||||||||||||| |||| |  ||||||||||||||| ||||||||| |   |||||||||||   |||||||| ||| ||||| | ||    
T  4206573 tatgtgaaaacacttattcaattaggatatatggaaaaacaattcggaggggtgattttttgatcaaaattgaccataaatcacccctctaaaaagagga 4206672  T
Q  101 agaagaa 107  Q
    |||||||    
T  4206673 agaagaa 4206679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 36624756 - 36624881
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||| | ||| ||||||| ||||||||||||||| ||||||||| || ||||  |||||| |  ||||||| |||  ||   ||||    
T  36624756 tatgtgaaatcacttatttagttaggatagaaggaaaaacaattcggatgggtgatttttgggtcatgattgaccctgaatcacccctctgaa---aaga 36624852  T
Q  101 agaagaaaatggtgacaactagggtttga 129  Q
    |||| |||| |||||||  ||||||||||    
T  36624853 agaataaaagggtgacagttagggtttga 36624881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 1074962 - 1075061
Alignment:
Q  8 aatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 107  Q
    |||||||||||||||||  ||| || ||||||||| ||||| ||||||||| || ||||||||||||   |||||||| |||  | || |||||||||||    
T  1074962 aatcacttattcaattagaatataaggaaaaacaactcggatgggtgatttttgggtcaaaattgaccataaatcacccctctgacaagaagaagaagaa 1075061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 39610279 - 39610131
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaa--------aaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaa 92  Q
    |||||||||||||||||||||||| ||||||| |||        |||||| ||||| ||||||||  || ||||||||||||   |||||||| |||  |    
T  39610279 tatgtgaaatcacttattcaattaggatagaaggaagaaaaaaaaaacaactcggaggggtgattattgggtcaaaattgaccataaatcacccctctga 39610180  T
Q  93 aaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaaa 141  Q
     || ||||||||||||  ||||||  ||||||||||| ||| |||||||    
T  39610179 caagaagaagaagaaaggggtgacgtctagggtttgagaaggagagaaa 39610131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 55090645 - 55090752
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||| ||||| | ||||| ||||||||| ||||| ||||||||| || ||  ||||| || | |||||||| |||  | || ||||    
T  55090645 tatgtgaaatcacttatttaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggttgaaattaaccctaaatcacccctctgacaagaaga 55090744  T
Q  101 agaagaaa 108  Q
    ||||||||    
T  55090745 agaagaaa 55090752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 38527330 - 38527236
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaa 95  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||| ||| | ||||||| ||  |||| |||||  | |||||||| ||| |||||    
T  38527330 tatgtgaaatcatttattcaattaagatagaaggaaaaacaatttggatgtgtgatttttggttcaagattgatcctaaatcacccctctaaaaa 38527236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 19645288 - 19645204
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    |||||||||||||||||| ||||| || ||||  |||||||||||||| || || ||| |  |||||||||||| | ||||||||    
T  19645288 tatgtgaaatcacttatttaattaggacagaagaaaaaacaattcggatggatggtttttaggtcaaaattgaccctaaatcacc 19645204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 40883933 - 40884015
Alignment:
Q  4 gtgaaatcacttattcaattatgatagaatg-aaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    ||||||||||||||||||||| |||| || | |||||||||||| |  | |||||| || |||||||||||| | ||||||||    
T  40883933 gtgaaatcacttattcaattaggataaaaggaaaaaacaattcgaattgatgatttttgggtcaaaattgaccctaaatcacc 40884015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 41868356 - 41868394
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaa 39  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  41868356 tatgtgaaatcacttattcaattaggatagaaggaaaaa 41868394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4817892 - 4817949
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 58  Q
    ||||||||||||| |||||||||| |||| || ||||||||||| ||| |||| ||||    
T  4817892 tatgtgaaatcacctattcaattaggataaaaagaaaaacaatttggaggggtaattt 4817949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 5684432 - 5684293
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||  |||||||| || |||||||||||| | |||||||| ||  ||||| || |    
T  5684432 tatgtgaaatcacttattcaattaggatagaatgaaaaacaattcggagaggtgatttttgcgtcaaaattgaccctaaatcacccctttaaaaagaata 5684333  T
Q  101 agaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    ||||||||| | ||||||||||||||| ||||| ||||||    
T  5684332 agaagaaaaggatgacaactagggtttaaaaaggagagaa 5684293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 5709482 - 5709343
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||  |||||||| || |||||||||||| | |||||||| ||  ||||| || |    
T  5709482 tatgtgaaatcacttattcaattaggatagaatgaaaaacaattcggagaggtgatttttgcgtcaaaattgaccctaaatcacccctttaaaaagaata 5709383  T
Q  101 agaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    ||||||||| | ||||||||||||||| ||||| ||||||    
T  5709382 agaagaaaaggatgacaactagggtttaaaaaggagagaa 5709343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 42603823 - 42603929
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||   |||||||| ||| ||||| ||||    
T  42603823 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaggggtgatttttgagtcaaaattgaccataaatcaccgctctaaaaagaaga 42603922  T
Q  101 agaagaa 107  Q
    |||||||    
T  42603923 agaagaa 42603929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 17473777 - 17473916
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| |||| || ||||||||||||||| ||||||||| |  |||||||||||| | |||||||| | |  |||| || |    
T  17473777 tatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgattttttggtcaaaattgaccctaaatcaccccactgaaaagaata 17473876  T
Q  101 agaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    ||||||||| ||||||||||||||||||| ||| ||||||    
T  17473877 agaagaaaagggtgacaactagggtttgagaaggagagaa 17473916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 17579437 - 17579298
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| |||| || ||||||||||||||| ||||||||| |  |||||||||||| | |||||||| | |  |||| || |    
T  17579437 tatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgattttttggtcaaaattgaccctaaatcaccccactgaaaagaata 17579338  T
Q  101 agaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    ||||||||| ||||||||||||||||||| ||| ||||||    
T  17579337 agaagaaaagggtgacaactagggtttgagaaggagagaa 17579298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 45457610 - 45457741
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaag- 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||| | ||||||| || |||||||||||| | |||||||| ||| ||||| |||     
T  45457610 tatgtgaaatcacttattcaattaagatagaaggaaaaacaattcggaggagtgatttttgcgtcaaaattgaccctaaatcacccctctaaaaagaaga 45457709  T
Q  100 --aagaagaaaatggtgacaactagggtttga 129  Q
      |||||||||  |||||||||||||||||||    
T  45457710 aaaagaagaaaggggtgacaactagggtttga 45457741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 17509258 - 17509399
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatca--cctctcaaaa-aaca 97  Q
    |||||||||||||||||||||||| |||| || |||||| ||||||| |||||||||| |  |||||||||||| | ||||||  ||||| |||| || |    
T  17509258 tatgtgaaatcacttattcaattaggataaaaggaaaaataattcgg-agggtgattttttggtcaaaattgaccctaaatcatccctctgaaaagaaga 17509356  T
Q  98 agaagaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    |||||||||||| ||||||||||||||||||| ||| ||||||    
T  17509357 agaagaagaaaagggtgacaactagggtttgagaaggagagaa 17509399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 17543956 - 17543815
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatca--cctctcaaaa-aaca 97  Q
    |||||||||||||||||||||||| |||| || |||||| |||||||| ||||||||| |  |||||||||||| | ||||||  ||||| |||| || |    
T  17543956 tatgtgaaatcacttattcaattaggataaaaggaaaaataattcgga-gggtgattttttggtcaaaattgaccctaaatcatccctctgaaaagaaga 17543858  T
Q  98 agaagaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    |||||||||||| ||||||||||||||||||| ||| ||||||    
T  17543857 agaagaagaaaagggtgacaactagggtttgagaaggagagaa 17543815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 1281191 - 1281322
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc--tctcaaaa-aaca 97  Q
    ||||||||||||||||||||||||  ||| |||||||||||||||||| ||||||||| |  |||||||| ||| | ||||||||  ||| |||| || |    
T  1281191 tatgtgaaatcacttattcaattagaatataatgaaaaacaattcggatgggtgattttttggtcaaaatggaccctaaatcacccatctgaaaagaata 1281290  T
Q  98 agaagaagaaaatggtgacaactagggtttga 129  Q
    || ||||||||| |||||||||||||||||||    
T  1281291 agtagaagaaaagggtgacaactagggtttga 1281322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 27535523 - 27535395
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||||||||||||||| ||||||  |||||| ||||||||||||||| ||||||||| ||  | ||||||||| | |||||||| |||   ||| ||||    
T  27535523 tatgtgaaatcacttatacaattagaatagaaggaaaaacaattcggatgggtgatttttggataaaaattgaccctaaatcacccctctgtaaaaaaga 27535424  T
Q  101 agaagaaaatggtgacaactagggtttga 129  Q
    ||||||||| |||||| ||||||||||||    
T  27535423 agaagaaaagggtgacgactagggtttga 27535395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 9785384 - 9785300
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| | ||||||||| || |||||||||||| | ||||||||    
T  9785384 tatgtgaaatcacttattcaattaagatagaaggaaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatcacc 9785300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 21603529 - 21603424
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| || ||||| ||| || |||||||||||| | |||||||| ||| ||||  ||||    
T  21603529 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcagaggggtgctttttg-gtcaaaattgaccctaaatcacccctctaaaacaaaga 21603431  T
Q  101 agaagaa 107  Q
    |||||||    
T  21603430 agaagaa 21603424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 46026083 - 46026189
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||| |||| ||||||||||||| ||||||| ||||||||||||||| | ||||||| || |||||||||||| | |||||||| |||  |||| ||||    
T  46026083 tatgttaaataacttattcaattaggatagaaggaaaaacaattcggatgtgtgatttttgggtcaaaattgaccctaaatcacccctctgaaaagaaga 46026182  T
Q  101 agaagaa 107  Q
    |||||||    
T  46026183 agaagaa 46026189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 28664966 - 28665050
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||| |||||||||  | |||||||||||| | ||||||||    
T  28664966 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtgattttagggtcaaaattgaccctaaatcacc 28665050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 48304453 - 48304557
Alignment:
Q  5 tgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaa 104  Q
    |||||||||||||||||||| ||||| | ||||| ||||||||| ||||||||| || |||||||||||| | |||||||| |||  |||| ||||| ||    
T  48304453 tgaaatcacttattcaattaggatagcaggaaaagcaattcggatgggtgatttttgggtcaaaattgaccctaaatcacccctctgaaaagaagaaaaa 48304552  T
Q  105 gaaaa 109  Q
    |||||    
T  48304553 gaaaa 48304557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 6667463 - 6667321
Alignment:
Q  1 tatgtgaaatcacttattcaa-ttatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaag 99  Q
    ||||||||||||||||||||| |||  ||||||  |||||||||||||  ||||||||| || |||||||||||| | |||||||  ||| ||||| |||    
T  6667463 tatgtgaaatcacttattcaaattagaatagaagaaaaaacaattcggtggggtgatttttgggtcaaaattgaccctaaatcactcctctaaaaagaag 6667364  T
Q  100 aagaaga--aaatggtgacaactagggtttgaaaagaagagaa 140  Q
    |||||||  ||| ||||||  ||||||||||| ||| ||||||    
T  6667363 aagaagaagaaagggtgacggctagggtttgagaaggagagaa 6667321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 32740820 - 32740714
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgt-gtcaaaattgactccaaatcacctctcaaaaaacaag 99  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||   ||||||||| | | |||||||||||||| |||||||| |||  |||| |||    
T  32740820 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcgagggggtgatttttttggtcaaaattgactctaaatcacc-ctctgaaaagaag 32740722  T
Q  100 aagaagaa 107  Q
    ||||||||    
T  32740721 aagaagaa 32740714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 36579366 - 36579472
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||||||||| |||||||||  | |||||||||||| | |||||| | |||  |||| ||||    
T  36579366 tatgtggaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgattttcgggtcaaaattgaccctaaatcatccctcttaaaagaaga 36579465  T
Q  101 agaagaa 107  Q
    |||||||    
T  36579466 agaagaa 36579472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 39533029 - 39533134
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| ||  | |||||| || |||||||||||| | |||||||| ||| ||||| ||||    
T  39533029 tatgtgaaatcacttattcaattaagatagaaggaaaaacaattcagagagatgatttttgggtcaaaattgaccctaaatcacc-ctctaaaaagaaga 39533127  T
Q  101 agaagaa 107  Q
    | |||||    
T  39533128 aaaagaa 39533134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 42644743 - 42644637
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||  | | ||||||| || |||||||||||  | |||||||| |||  |||| ||||    
T  42644743 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcaaatgagtgatttttgagtcaaaattgatcctaaatcacccctctgaaaagaaga 42644644  T
Q  101 agaagaa 107  Q
    |||||||    
T  42644643 agaagaa 42644637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 11833086 - 11832943
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcgga-agggtgatttgtgtgtcaaaattgactccaaatca--cctctcaaaa-aac 96  Q
    |||||||||||||||||||||||| || |||| |||||||||||||||  ||||||||| || ||||||||||||   ||||||  ||||| |||| ||     
T  11833086 tatgtgaaatcacttattcaattaggaaagaaggaaaaacaattcggagggggtgatttttgggtcaaaattgaccataaatcatccctctgaaaagaag 11832987  T
Q  97 aagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    ||||||||||||  | ||||  ||||||||||| ||| ||||||    
T  11832986 aagaagaagaaagagatgacggctagggtttgagaaggagagaa 11832943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 2622655 - 2622585
Alignment:
Q  5 tgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgact 75  Q
    |||||| ||||||||||||| ||||||| ||||||||||||||| | ||||||| || |||||||||||||    
T  2622655 tgaaattacttattcaattaagatagaaggaaaaacaattcggatgcgtgatttttgggtcaaaattgact 2622585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 10574448 - 10574342
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||| |||||  ||||||||||| |||| || ||||||||||||||| ||||||||| || |||||||||||| | ||||||||  || ||||| ||||    
T  10574448 tatgtaaaatcgtttattcaattaggataaaaggaaaaacaattcggaggggtgatttttgagtcaaaattgaccctaaatcacccatctaaaaagaaga 10574349  T
Q  101 agaagaa 107  Q
    | |||||    
T  10574348 aaaagaa 10574342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 21990729 - 21990644
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaa-caattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    |||||||||||||||||||||||| ||||| | |||||| ||||||||| ||||||||| |  |||||||||||| | ||||||||    
T  21990729 tatgtgaaatcacttattcaattaggatagcaggaaaaaacaattcggaggggtgatttttcagtcaaaattgaccctaaatcacc 21990644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 4621425 - 4621508
Alignment:
Q  5 tgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctct 88  Q
    ||||||| |||||||||||||| ||||| ||||||||| ||| ||| ||||||| |  |||||||||||||| |||| ||||||    
T  4621425 tgaaatcgcttattcaattatggtagaaggaaaaacaactcgaaagagtgatttttaggtcaaaattgactctaaataacctct 4621508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 45482131 - 45482048
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcac 84  Q
    |||||||||||||||||| ||||| ||||||| ||||||||  ||||| |||||||||  | |||||||||||| | |||||||    
T  45482131 tatgtgaaatcacttatttaattaggatagaaggaaaaacagctcggaggggtgattttggggtcaaaattgaccctaaatcac 45482048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24320277 - 24320350
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    |||||||||||||||||| ||||| ||||||| ||||||||| ||| | | ||||||| || ||||||||||||    
T  24320277 tatgtgaaatcacttattaaattaagatagaaggaaaaacaactcgaatgagtgatttttgagtcaaaattgac 24320350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10094508 - 10094460
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaa 49  Q
    |||||||||||||||||||||||| |||| || ||||||||||||||||    
T  10094508 tatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaa 10094460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 22747562 - 22747645
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    ||||| |||||||||||||||||| ||||||| | ||||||| | ||| ||||||||| || |||||||||||| | ||||||||    
T  22747562 tatgtcaaatcacttattcaattaggatagaa-ggaaaacaacttggaggggtgatttttgggtcaaaattgaccctaaatcacc 22747645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 41288025 - 41287918
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatg-aaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaag 99  Q
    ||||||||||||| |||||||||| ||||||| | |||||  | ||||| ||||||||  || |||||||||||| | |||||||| ||| || || |||    
T  41288025 tatgtgaaatcacctattcaattaggatagaaggaaaaaatcactcggatgggtgattattgggtcaaaattgaccctaaatcacccctctaagaagaag 41287926  T
Q  100 aagaagaa 107  Q
    ||||||||    
T  41287925 aagaagaa 41287918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15674666 - 15674712
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcgg 47  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||||    
T  15674666 tatgtgaaatcacttattcaattaggataggaggaaaaacaattcgg 15674712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 15674741 - 15674807
Alignment:
Q  63 gtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttga 129  Q
    |||||||||||| | |||||||| |||  |||| ||||||||||||| |||||| ||||||||||||    
T  15674741 gtcaaaattgaccctaaatcacccctctgaaaagaagaagaagaaaagggtgacgactagggtttga 15674807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 43847137 - 43847083
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 55  Q
    |||||||||||||||||||||||| ||||  | ||||||||||||||| ||||||    
T  43847137 tatgtgaaatcacttattcaattaggataagaggaaaaacaattcggaggggtga 43847083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 21954878 - 21954956
Alignment:
Q  6 gaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    ||||||| ||||| ||||| ||||||||||||||||| ||||| | ||||||| || || ||||||||| | ||||||||    
T  21954878 gaaatcatttatttaattaggatagaatgaaaaacaactcggatgagtgattt-tgggttaaaattgaccctaaatcacc 21954956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 14657877 - 14657934
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 58  Q
    |||||||||| ||||||||||||| ||||||| ||||||||  |||||  ||||||||    
T  14657877 tatgtgaaataacttattcaattaagatagaaggaaaaacagctcggattggtgattt 14657934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9720028 - 9720076
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaa 49  Q
    |||||||||||||||||||||||| |||| ||  |||||||||| ||||    
T  9720028 tatgtgaaatcacttattcaattacgatataagaaaaaacaatttggaa 9720076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 12704754 - 12704615
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| |||| || ||||||||||||| | ||||||||| || |||||||||||| | |||||||| ||| ||||| ||||    
T  12704754 tatgtgaaatcacttattcaattaggatataaggaaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatcacccctctaaaaagaaga 12704655  T
Q  101 agaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    ||||||||| |||||| |||||||||||| ||| ||||||    
T  12704654 agaagaaaagggtgacgactagggtttgagaaggagagaa 12704615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 43474184 - 43474289
Alignment:
Q  3 tgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaag 102  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||| || |||||||||||| | |||||||| ||| ||||| ||||||    
T  43474184 tgtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgaccctaaatcacccctctaaaaagaagaag 43474283  T
Q  103 aagaaa 108  Q
    ||||||    
T  43474284 aagaaa 43474289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 5754355 - 5754227
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||| |||||||| || ||||||| ||||||||||||||| || |||||| || |||||||||||| | |||||||| ||| ||||| ||||    
T  5754355 tatgtgaaatcatttattcaactaggatagaaggaaaaacaattcggagggatgatttttgggtcaaaattgaccctaaatcacccctctaaaaagaaga 5754256  T
Q  101 agaagaaaatggtgacaactagggtttga 129  Q
    ||||||||||| ||||  |||||||||||    
T  5754255 agaagaaaatgatgacggctagggtttga 5754227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 31908870 - 31909009
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||||||||||||||||||| || |||| ||  |||||||||||||||||||||||| ||  ||||||||||||| |||||| | ||| ||||| ||||    
T  31908870 tatgtgaaatcacttattcaactaggataaaagaaaaaacaattcggaagggtgatttttggatcaaaattgactctaaatcatccctctaaaaagaaga 31908969  T
Q  101 agaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    |||| |||  ||||||| ||| ||||||| ||| ||||||    
T  31908970 agaataaaggggtgacagctaaggtttgagaaggagagaa 31909009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 36868075 - 36867936
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||||||||| |||||| |||||  |||||| |||||||||||| || ||||||||| || |||||||||||| | |||||||| ||| | ||| ||||    
T  36868075 tatgtgaaatcgcttattgaattagaatagaaggaaaaacaattcagaggggtgatttttgagtcaaaattgaccctaaatcacccctctagaaagaaga 36867976  T
Q  101 agaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    |||||| |||||||||  ||||||||||| ||| ||||||    
T  36867975 agaagagaatggtgacggctagggtttgagaaggagagaa 36867936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 11937912 - 11938019
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatg-aaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaag 99  Q
    |||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||||| || |||||||||||| | |||||||| |||  |||| |||    
T  11937912 tatgtgaaatcacttattcaattaggatagaaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctgaaaagaag 11938011  T
Q  100 aagaagaa 107  Q
    ||||||||    
T  11938012 aagaagaa 11938019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 25067919 - 25067816
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||||||||||||||||||||||  |||||| ||||||||| ||||| ||||||||| || |||||||||||| | |||||||||||| || || ||||    
T  25067919 tatgtgaaatcacttattcaattaaaatagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacctctctaacaagaaga 25067820  T
Q  101 agaa 104  Q
    ||||    
T  25067819 agaa 25067816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 15919941 - 15919835
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||| ||||||||||| ||||||| ||||||||| ||||| ||||||||| || |||||||||||||| |||||||| ||| || || |||     
T  15919941 tatgtgaaatcatttattcaattaggatagaaggaaaaacaactcggaggggtgatttttgggtcaaaattgactctaaatcacccctctaataagaagg 15919842  T
Q  101 agaagaa 107  Q
    |||||||    
T  15919841 agaagaa 15919835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33012144 - 33012038
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||||| | ||||||| || |||||||||||| | ||||||||  ||  |||| ||||    
T  33012144 tatgtgaaatcacttattcaattagaatagaaggaaaaacaattcggatgagtgatttttgggtcaaaattgaccctaaatcacccgtctgaaaagaaga 33012045  T
Q  101 agaagaa 107  Q
    |||||||    
T  33012044 agaagaa 33012038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 38535359 - 38535465
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||||||||||| |||||| |||||  | ||||| ||| || |||||||||||| | |||||||| |||  |||| ||||    
T  38535359 tatgtgaaatcacttattcaattatgatagaaggaaaaaaaattcaaaggggtgctttttgggtcaaaattgaccctaaatcacccctctgaaaagaaga 38535458  T
Q  101 agaagaa 107  Q
    |||||||    
T  38535459 agaagaa 38535465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 27095772 - 27095688
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||| ||||||||| |  |||||||||||| | ||||||||    
T  27095772 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtgatttttaggtcaaaattgaccctaaatcacc 27095688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 44942352 - 44942240
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| |||||||  |||||||| ||||| ||||||||| || ||||||||||||   ||||||||  ||  |||| ||||    
T  44942352 tatgtgaaatcacttattcaattaggatagaagaaaaaacaactcggaggggtgatttttgggtcaaaattgaccataaatcacccatctgaaaagaaga 44942253  T
Q  101 agaagaaaatggt 113  Q
    |||||||| ||||    
T  44942252 agaagaaagtggt 44942240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 35333572 - 35333457
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||  | ||||||||| || |||||||||||  | |||||| || | ||| || ||||    
T  35333572 tatgtgaaatcacttattcaattaggatagcaggaaaaacaattcttaggggtgatttttgggtcaaaattgatcctaaatcatctttgaaagaaaaaga 35333473  T
Q  101 agaagaaaatggtgac 116  Q
    |||||||| |||||||    
T  35333472 agaagaaagtggtgac 35333457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 7073004 - 7073110
Alignment:
Q  3 tgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaag 102  Q
    |||||| | ||||||||||||| ||||||| ||||| ||||||| ||||| ||||| || |||||||||||| | |||||||| |||  |||| ||||||    
T  7073004 tgtgaagttacttattcaattaggatagaaggaaaaccaattcgaaagggcgatttttgggtcaaaattgaccctaaatcacccctctgaaaagaagaag 7073103  T
Q  103 aagaaaa 109  Q
    |||||||    
T  7073104 aagaaaa 7073110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 9690027 - 9690133
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||||| |||||||||||||||| ||||||| |||||||| |||||| ||||||||| || |||||| |||||   |||||||| |||  |||| ||||    
T  9690027 tatgtgagatcacttattcaattaggatagaaggaaaaacagttcggaggggtgatttttgggtcaaatttgaccttaaatcacccctctgaaaagaaga 9690126  T
Q  101 agaagaa 107  Q
    |||||||    
T  9690127 agaagaa 9690133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 22597202 - 22597061
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||| ||||| ||||||| ||||||||| ||||| || |||||| || ||||||||||||   |||||||| |||  | || || |    
T  22597202 tatgtgaaatcacttatttaattaggatagaaggaaaaacaactcggagggatgatttttgggtcaaaattgaccttaaatcacccctctgacaagaaaa 22597103  T
Q  101 agaaga--aaatggtgacaactagggtttgaaaagaagagaa 140  Q
    ||||||  ||| |||||| |||||||||||| ||| ||||||    
T  22597102 agaagaagaaagggtgacgactagggtttgagaaggagagaa 22597061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 20561186 - 20561270
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    ||||||||| ||||||||| |||  ||||||| ||||||||||||||| ||||||||| || |||||||||||| | ||||||||    
T  20561186 tatgtgaaaccacttattcgatttggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacc 20561270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 18089446 - 18089540
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaa 95  Q
    |||||||||||||||||||||||| |||| ||  |||||||||||||| | ||||||| ||  ||||||||||| | |||||||| ||| |||||    
T  18089446 tatgtgaaatcacttattcaattaggatataagaaaaaacaattcggaggagtgatttttggatcaaaattgaccctaaatcacccctctaaaaa 18089540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 13740718 - 13740783
Alignment:
Q  5 tgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaat 70  Q
    |||||||||||||||||||| ||||||| |||||||||||||||  |||||||| || ||||||||    
T  13740718 tgaaatcacttattcaattaggatagaaggaaaaacaattcggagtggtgatttttgggtcaaaat 13740783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17268178 - 17268251
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||| | || |||||| || ||||||||||||    
T  17268178 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcgaagggatgatttttgggtcaaaattgac 17268251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 32015291 - 32015181
Alignment:
Q  1 tatgtgaaatcact----tattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaac 96  Q
    ||||||||||||||    |||| |||||||||| || ||||||||| ||||| ||||||||| || |||||||||||| | |||||||| ||| || ||     
T  32015291 tatgtgaaatcacttatttattgaattatgatataaggaaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctaacaaa 32015192  T
Q  97 aagaagaagaa 107  Q
    |||||||||||    
T  32015191 aagaagaagaa 32015181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 34416815 - 34416888
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    |||||||||||||||||||||||| |||| || ||||||||||||||| || |||||| |  ||||||||||||    
T  34416815 tatgtgaaatcacttattcaattaggatataaggaaaaacaattcggagggatgattttttggtcaaaattgac 34416888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 9978723 - 9978851
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||| ||||||||||| |||| || ||||||||||| | | ||||||||| || ||||||||||||   |||||||| |||   ||| ||||    
T  9978723 tatgtgaaatcatttattcaattaagataaaaggaaaaacaatttgaaggggtgatttttgggtcaaaattgaccttaaatcacccctctggaaagaaga 9978822  T
Q  101 agaagaaaatggtgacaactagggtttga 129  Q
    | ||||||  |||||| |||| |||||||    
T  9978823 aaaagaaaggggtgacgactaaggtttga 9978851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 34471033 - 34470912
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagg--gtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaa 98  Q
    |||||||||||||| ||||||||| ||||||| || |||||||||||| ||  ||||||| || |||||||||||| || || | || ||| ||||| ||    
T  34471033 tatgtgaaatcactgattcaattaagatagaaagataaacaattcggaggggtgtgatttttgggtcaaaattgac-cctaaacccccctctaaaaagaa 34470935  T
Q  99 gaagaagaaaatggtgacaacta 121  Q
    ||| ||||||| |||||| ||||    
T  34470934 gaaaaagaaaagggtgacgacta 34470912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 28261966 - 28262055
Alignment:
Q  20 aattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc--tctcaaaaaacaagaagaagaa 107  Q
    ||||||||||||| ||||||||||||||| | ||||||| || |||||||||||| | ||||||||  ||| ||| || |||||||||||    
T  28261966 aattatgatagaaggaaaaacaattcggatgagtgatttttgggtcaaaattgaccctaaatcacccatctgaaagaagaagaagaagaa 28262055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10287060 - 10287132
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    |||||||||||||||||||||||| |||| || ||||  ||||||||| ||||||||| | |||||||||||||    
T  10287060 tatgtgaaatcacttattcaattaggata-aaagaaatgcaattcggaggggtgatttttatgtcaaaattgac 10287132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28231151 - 28231208
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 58  Q
    |||||||||||||||||||||  | ||||||| ||||||||||||||| |||||||||    
T  28231151 tatgtgaaatcacttattcaaccaagatagaaggaaaaacaattcggatgggtgattt 28231208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 38384497 - 38384602
Alignment:
Q  2 atgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaa 101  Q
    ||||||||||||||||||||||| | || || ||||||||| |||||   ||||||| || |||||||||||| | |||||||| ||| || ||||| ||    
T  38384497 atgtgaaatcacttattcaattagggtataaggaaaaacaaatcggagatgtgatttttgggtcaaaattgacccaaaatcacccctctaacaacaacaa 38384596  T
Q  102 gaagaa 107  Q
     |||||    
T  38384597 caagaa 38384602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 34963121 - 34963261
Alignment:
Q  2 atgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaa--- 98  Q
    ||||||||||||||||||||||| | ||||| ||||||||| || | |||||||||| |  |||||||||||| | |||| ||| |||  | |||||       
T  34963121 atgtgaaatcacttattcaattagggtagaaggaaaaacaaatcag-agggtgatttttaggtcaaaattgacccaaaattacccctctgacaacaagag 34963219  T
Q  99 gaagaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    |||||||||| ||||||||  |||||||| | ||| ||||||    
T  34963220 gaagaagaaagtggtgacagttagggtttcagaaggagagaa 34963261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4604361 - 4604434
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    ||||||||||||||||||||||||  |||||| ||||||||| ||| | | || |||| || ||||||||||||    
T  4604361 tatgtgaaatcacttattcaattagaatagaaggaaaaacaactcgaatgagtaatttttgggtcaaaattgac 4604434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4732138 - 4732065
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    |||||||||||||||||||||||| ||||||| ||||  ||| |   ||||||||||| || ||||||||||||    
T  4732138 tatgtgaaatcacttattcaattaggatagaaggaaatgcaactaacaagggtgatttttgagtcaaaattgac 4732065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 32314509 - 32314461
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaa 49  Q
    |||||||||||| ||||||||||| |||||||  |||||||||||||||    
T  32314509 tatgtgaaatcatttattcaattaggatagaagaaaaaacaattcggaa 32314461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4426712 - 4426759
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcgga 48  Q
    |||||||||||| ||||||||||| ||||||| ||||||||| |||||    
T  4426712 tatgtgaaatcatttattcaattaggatagaaggaaaaacaaatcgga 4426759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 17767611 - 17767689
Alignment:
Q  6 gaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    ||||||||||||| ||||| |||| || ||||||||| ||| | |||||| || || |||||||||||||| ||||||||    
T  17767611 gaaatcacttatttaattaggatataaggaaaaacaactcgaaggggtga-ttctgggtcaaaattgactctaaatcacc 17767689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 8e-33; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 22757161 - 22757022
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||  |||||||| || |||||||||||| | |||||||| |||  |||| ||||    
T  22757161 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggagtggtgatttttgagtcaaaattgaccctaaatcacccctctgaaaagaaga 22757062  T
Q  101 agaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    ||||||||| ||||||  ||||||||||| ||| ||||||    
T  22757061 agaagaaaagggtgacggctagggtttgagaaggagagaa 22757022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 43244435 - 43244563
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| || ||||||||| || |||||||||||| | |||||||| ||| ||||| ||||    
T  43244435 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcagaggggtgatttttgggtcaaaattgaccctaaatcacccctctaaaaaaaaga 43244534  T
Q  101 agaagaaaatggtgacaactagggtttga 129  Q
    ||||||||| | ||||  |||||||||||    
T  43244535 agaagaaaaggatgacggctagggtttga 43244563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 394329 - 394450
Alignment:
Q  2 atgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaa 101  Q
    ||||||||||||||||| ||||| ||||||| ||||||||||||||| ||||||||| || |||||||||||| | |||||||| |||      ||| ||    
T  394329 atgtgaaatcacttattgaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctc------caaaaa 394422  T
Q  102 gaagaaaatggtgacaactagggtttga 129  Q
    |||||||| |||||||||||||||||||    
T  394423 gaagaaaagggtgacaactagggtttga 394450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 31522049 - 31521910
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||| |  |||||||||||| | |||||||| ||   |||| ||||    
T  31522049 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttaggtcaaaattgaccctaaatcacccctttgaaaagaaga 31521950  T
Q  101 agaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    | ||||||| ||  || |||||||||||| ||| ||||||    
T  31521949 acaagaaaagggccacgactagggtttgagaaggagagaa 31521910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 24568767 - 24568873
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||| |||||||||||||||||| ||||||| |||||| |||||||||||||||||| || ||||||||| || | |||||||| |||  |||| ||||    
T  24568767 tatgtaaaatcacttattcaattaggatagaaggaaaaataattcggaagggtgatttttgggtcaaaattcaccctaaatcacccctctgaaaagaaga 24568866  T
Q  101 agaagaa 107  Q
    |||||||    
T  24568867 agaagaa 24568873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 26742517 - 26742623
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||| || |||||||||||  | ||||||||  || ||||| ||||    
T  26742517 tatgtgaaatcacttattcaattaagatagaaagaaaaacaattcggatgggtgatttttgggtcaaaattgatcctaaatcacccatctaaaaagaaga 26742616  T
Q  101 agaagaa 107  Q
    | |||||    
T  26742617 aaaagaa 26742623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 20399961 - 20400099
Alignment:
Q  5 tgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaa 104  Q
    |||||||||||||||||||| |||||||  |||| ||||||||  ||||||||| || |||||||||||| | ||||| ||  || ||||| ||||||||    
T  20399961 tgaaatcacttattcaattaggatagaagaaaaagcaattcgggtgggtgatttttgggtcaaaattgaccctaaatcgcccttctaaaaagaagaagaa 20400060  T
Q  105 g---aaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    |   |||| ||||||||||||||||||| ||| ||||||    
T  20400061 gaaaaaaaaggtgacaactagggtttgagaaggagagaa 20400099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 39837662 - 39837522
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatg-aaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaag 99  Q
    |||||||||||||||||||||||| |||| || | ||||| || ||| | ||||||||| || |||||||||||| | |||||||| |||  |||| |||    
T  39837662 tatgtgaaatcacttattcaattaggataaaagggaaaaaaaaatcgaaggggtgatttttgggtcaaaattgacgctaaatcacccctctgaaaagaag 39837563  T
Q  100 aagaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    |||||||||| |||||| ||||| |||||| ||| ||||||    
T  39837562 aagaagaaaagggtgacgactagtgtttgagaaggagagaa 39837522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 24100206 - 24100099
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctc-aaaaaacaag 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||| |||| |||| ||  ||||||||||  | |||||||| ||| |||||| |||    
T  24100206 tatgtgaaatcacttattcaattacgatagaaggaaaaacaattcggatgggtaatttttggttcaaaattgatcctaaatcacccctctaaaaaaaaag 24100107  T
Q  100 aagaagaa 107  Q
    ||||||||    
T  24100106 aagaagaa 24100099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 13965627 - 13965545
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatca 83  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| | ||||||||| || |||||||||||| | ||||||    
T  13965627 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatca 13965545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7060391 - 7060318
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||| || || |||||||||    
T  7060391 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggttaaaattgac 7060318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 29922904 - 29922761
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaa---caattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaaca 97  Q
    |||||||||||||||||||||||| ||||||| ||||||   ||| | ||| ||||||||  |  |||||||||||| | ||||||||||||  | || |    
T  29922904 tatgtgaaatcacttattcaattaggatagaaagaaaaaaaacaacttggaggggtgattattaggtcaaaattgaccctaaatcacctctctgacaaga 29922805  T
Q  98 agaagaagaaaatggtgacaactagggtttgaaaagaagagaaa 141  Q
    |||||||||||  ||||||  ||||||||||| |||||||||||    
T  29922804 agaagaagaaaggggtgacggctagggtttgagaagaagagaaa 29922761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 7083870 - 7083997
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||  | ||||||||| ||  ||||||||||| | |||| | |  ||  |||| ||||    
T  7083870 tatgtgaaatcacttattcaattatgatagaaggaaaaacaattcataggggtgatttttggatcaaaattgaccctaaattatccatctgaaaagaaga 7083969  T
Q  101 agaagaaaatggtgacaactagggtttga 129  Q
    ||||| ||| |||||| ||||||||||||    
T  7083970 agaag-aaagggtgacgactagggtttga 7083997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 25658234 - 25658092
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||| ||||| || |||| ||||||||||| |||  |||||||| || ||||||||| || | |||||||| ||| ||||| ||||    
T  25658234 tatgtgaaatcacttattaaattaggaaagaaggaaaaacaatttggagaggtgatttttgagtcaaaattaaccctaaatcacccctctaaaaagaaga 25658135  T
Q  101 aga---agaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    |||   |||||| ||||||  ||||||||||| ||| ||||||    
T  25658134 agaagaagaaaagggtgacggctagggtttgagaaggagagaa 25658092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 6911747 - 6911640
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| | ||||| ||||||||| |||||  |||||||| ||  ||||||||||| | |||||||| ||| || || ||||    
T  6911747 tatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggagaggtgatttttggatcaaaattgaccctaaatcacccctctaacaagaaga 6911648  T
Q  101 agaagaaa 108  Q
    ||||||||    
T  6911647 agaagaaa 6911640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 26674439 - 26674309
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc--tctcaaaa-aaca 97  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| ||| ||||||||| |  |||||||||||  | ||||||||  ||| |||| || |    
T  26674439 tatgtgaaatcacttattcaattatgatagaaggaaaagcaatttggaggggtgatttttaggtcaaaattgatcctaaatcacccatctgaaaagaaga 26674340  T
Q  98 agaagaagaaaatggtgacaactagggtttg 128  Q
    |||||||||||  ||||||| |||| |||||    
T  26674339 agaagaagaaaggggtgacatctagagtttg 26674309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 8712597 - 8712491
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||| |||| || ||||||| |||||||||||  || ||||||||| || |||||||||||| | |||||||| ||  ||||| ||||    
T  8712597 tatgtgaaatcacttactcaactaggatagaaggaaaaacaattatgaggggtgatttttgggtcaaaattgaccctaaatcacccctgtaaaaagaaga 8712498  T
Q  101 agaagaa 107  Q
    |||||||    
T  8712497 agaagaa 8712491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 11210367 - 11210473
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||||||| | | |||||| |||||||| ||||||||| |  | |||||||||| | |||||||| ||| | ||| ||||    
T  11210367 tatgtgaaatcacttattcaattatgatgggaggaaaaataattcggaggggtgatttttagggcaaaattgaccctaaatcacccctctacaaagaaga 11210466  T
Q  101 agaagaa 107  Q
    |||||||    
T  11210467 agaagaa 11210473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 24825716 - 24825610
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||| | ||||||| |  |||||||||||  | |||||||| ||| || || ||||    
T  24825716 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggagtgatttttaggtcaaaattgatcctaaatcacccctctaacaagaaga 24825617  T
Q  101 agaagaa 107  Q
    |||||||    
T  24825616 agaagaa 24825610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 478066 - 478201
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||| |||||||||||||||||| |||| || |||||||||||||| | |||||||| || ||||||||||||   |||||||| ||| |||   ||||    
T  478066 tatgtaaaatcacttattcaattaggatataaggaaaaacaattcgg-atggtgatttttgggtcaaaattgaccataaatcacccctctaaa---aaga 478161  T
Q  101 agaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    ||||||||  ||||||  ||||||||||| ||| ||||||    
T  478162 agaagaaaggggtgacggctagggtttgagaaggagagaa 478201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 44757096 - 44757169
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||| | ||||||||| || ||||||||||||    
T  44757096 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcgaatgggtgatttttgggtcaaaattgac 44757169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 51152192 - 51152119
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||||| ||||||||| || ||||| ||||||    
T  51152192 tatgtgaaatcacttattaaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaatattgac 51152119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 27394891 - 27394791
Alignment:
Q  7 aaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaaga 106  Q
    |||| ||||||||||||| ||||||| |||||| ||| |||||||||||||| || |||||||||||| | |||||||| ||   |||| ||||||||||    
T  27394891 aaattacttattcaattaggatagaaggaaaaataatccggaagggtgatttttgggtcaaaattgaccctaaatcacccctgtgaaaagaagaagaaga 27394792  T
Q  107 a 107  Q
    |    
T  27394791 a 27394791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 22049464 - 22049542
Alignment:
Q  6 gaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||| || ||||||||| || | ||||||||    
T  22049464 gaaatcacttattcaattaggatagaaggaaaaacaattcgaaagggtgattt-tgggtcaaaattaaccctaaatcacc 22049542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 12717177 - 12717281
Alignment:
Q  6 gaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctc--tcaaaaaacaagaaga 103  Q
    ||||||||||||| ||||| |||||||  |||||||| ||||| || |||||| || |||||||||||||| ||||||||||  |||| | |||||||||    
T  12717177 gaaatcacttatttaattaggatagaagaaaaaacaagtcggacggatgattt-tgggtcaaaattgactctaaatcacctctttcaatagacaagaaga 12717275  T
Q  104 agaaaa 109  Q
    ||||||    
T  12717276 agaaaa 12717281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29268831 - 29268904
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    |||||||||||||||||||||||| |||| || ||||||||| ||||| |||||||||  | ||||||||||||    
T  29268831 tatgtgaaatcacttattcaattaggataaaaggaaaaacaactcggaggggtgattttagggtcaaaattgac 29268904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38944201 - 38944274
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    ||||||||||||||||||||| || ||||||| ||||||||||| ||| ||||||||| || | ||||||||||    
T  38944201 tatgtgaaatcacttattcaactacgatagaaggaaaaacaatttggaggggtgatttttgggccaaaattgac 38944274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43493341 - 43493394
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtg 54  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  43493341 tatgtgaaatcacttattcaattaagatagaaggaaaaacaattcggaggggtg 43493394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 7861259 - 7861343
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    |||||||||||||||||| ||||| ||||||| |||||| ||||| ||  |||||||| || ||||||||||| || ||||||||    
T  7861259 tatgtgaaatcacttatttaattaggatagaaggaaaaataattcagagtggtgatttttgggtcaaaattgattctaaatcacc 7861343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 7084273 - 7084167
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||| ||||||||||||||||| | ||||| ||||||||| |||||||  | |||| || |||||||||||  | |||||||| |||  | |||||||    
T  7084273 tatgtgcaatcacttattcaattaaggtagaaggaaaaacaaatcggaagcataatttttgggtcaaaattgaacctaaatcacccctctgacaacaaga 7084174  T
Q  101 agaagaa 107  Q
    |||||||    
T  7084173 agaagaa 7084167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 5814414 - 5814310
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||| ||||||||||||| ||||||| | ||||||| | ||| || |||||| ||  ||||||||||| | |||||||||| | || || ||||    
T  5814414 tatgtgaaataacttattcaattaagatagaagggaaaacaacttggagggatgatttttggatcaaaattgaccctaaatcacctccctaacaagaaga 5814315  T
Q  101 agaag 105  Q
    |||||    
T  5814314 agaag 5814310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 20887810 - 20887882
Alignment:
Q  2 atgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    ||||||||||||||||| ||||| |||||||  || || |||||||| ||||||||| || ||||||||||||    
T  20887810 atgtgaaatcacttattgaattaagatagaaaaaataataattcggatgggtgatttttgggtcaaaattgac 20887882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 626609 - 626671
Alignment:
Q  8 aatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaatt 71  Q
    ||||||||||||||||||||||||| |||||| ||||| || ||||||||| || |||||||||    
T  626609 aatcacttattcaattatgatagaa-gaaaaataattcagatgggtgatttttgggtcaaaatt 626671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 30202105 - 30201999
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| |||| || ||||||||| | | | ||||||||| ||  |||||||||||   |||||||| |||  | || ||||    
T  30202105 tatgtgaaatcacttattcaattaagataaaaggaaaaacaactagaaggggtgatttttggatcaaaattgaccttaaatcacccctctgacaagaaga 30202006  T
Q  101 agaagaa 107  Q
    |||||||    
T  30202005 agaagaa 30201999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2447867 - 2447810
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 58  Q
    |||||||||||||||||||||||| |||||||  ||||| |||||| | |||||||||    
T  2447867 tatgtgaaatcacttattcaattaggatagaaaaaaaaataattcgaaggggtgattt 2447810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19745456 - 19745384
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattga 73  Q
    |||||||||||| ||||||||||| |||| ||  |||||||||||||| |  |||||| || |||||||||||    
T  19745456 tatgtgaaatcaattattcaattaggataaaagcaaaaacaattcggatgaatgatttttgggtcaaaattga 19745384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19794350 - 19794422
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattga 73  Q
    |||||||||||| ||||||||||| |||| ||  |||||||||||||| |  |||||| || |||||||||||    
T  19794350 tatgtgaaatcaattattcaattaggataaaagcaaaaacaattcggatgaatgatttttgggtcaaaattga 19794422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 3159103 - 3159052
Alignment:
Q  7 aaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 58  Q
    |||||||||||| ||||||||||||| ||||||||| ||||||  |||||||    
T  3159103 aaatcacttatttaattatgatagaaggaaaaacaactcggaatagtgattt 3159052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 50801284 - 50801237
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcgga 48  Q
    |||||||||||||||||||||||| |||| || |||||| ||||||||    
T  50801284 tatgtgaaatcacttattcaattaggataaaaggaaaaataattcgga 50801237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 39523475 - 39523433
Alignment:
Q  2 atgtgaaatcacttattcaattatgatagaatgaaaaacaatt 44  Q
    ||||||||||||||||||||||| |||| || |||||||||||    
T  39523475 atgtgaaatcacttattcaattaggataaaaggaaaaacaatt 39523433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6882023 - 6881966
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 58  Q
    |||||||||||||||||| ||||| ||||||| |||||| || ||| | |||||||||    
T  6882023 tatgtgaaatcacttatttaattaggatagaaggaaaaataactcgaaggggtgattt 6881966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13586295 - 13586343
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaa 49  Q
    |||||||||||||||||||||||| |||| ||  |||||||||| ||||    
T  13586295 tatgtgaaatcacttattcaattacgatataagaaaaaacaatttggaa 13586343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 17699619 - 17699481
Alignment:
Q  2 atgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaa 101  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||| || |||||||||||| | |||||||   ||  |||| |||||    
T  17699619 atgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcactcatctgaaaagaagaa 17699520  T
Q  102 gaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    |||||||| |||||| |||||||||||| ||| ||||||    
T  17699519 gaagaaaagggtgacgactagggtttgagaaggagagaa 17699481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 17331395 - 17331289
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||| ||||||||| || |||||||||||| | |||||||| |||  | |||||||    
T  17331395 tatgtgaaatcacttattcaattaagatagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctgacaacaaga 17331296  T
Q  101 agaagaa 107  Q
    |||||||    
T  17331295 agaagaa 17331289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 28040696 - 28040567
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| |||| || ||||||| ||| ||| ||||||||| || ||||||||||||   |||||||| |||  |||| ||||    
T  28040696 tatgtgaaatcacttattcaattaggatataaggaaaaacgatttggaggggtgatttttgggtcaaaattgaccgtaaatcacccctctgaaaagaaga 28040597  T
Q  101 agaagaaaatggtgacaactagggtttgaa 130  Q
    |||||||| |||||||  |||| |||||||    
T  28040596 agaagaaagtggtgacggctagagtttgaa 28040567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 12439692 - 12439795
Alignment:
Q  5 tgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaa 104  Q
    ||||||||||||||||| || |||||||||||||||||||||| |||||||||| |  |||||||||  | | |||||||||||||||||| ||||||||    
T  12439692 tgaaatcacttattcaactaggatagaatgaaaaacaattcgg-agggtgatttttaggtcaaaattatccctaaatcacctctcaaaaaagaagaagaa 12439790  T
Q  105 gaaaa 109  Q
     ||||    
T  12439791 aaaaa 12439795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 32347768 - 32347899
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatg-aaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatca--cctctcaaaaaaca 97  Q
    |||||||||||||||||||||||| ||||||| | |||||||| ||||| ||||||||| || |||||| ||||| | ||||||  ||||| |||| | |    
T  32347768 tatgtgaaatcacttattcaattaggatagaaggaaaaaacaagtcggaggggtgatttttgggtcaaagttgaccctaaatcacccctctgaaaagaaa 32347867  T
Q  98 agaagaagaaaatggtgacaactagggtttga 129  Q
    ||||||||| |||||||||  |||||||||||    
T  32347868 agaagaagagaatggtgacggctagggtttga 32347899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 17096293 - 17096433
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaa---caattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaaca 97  Q
    |||||||||||||||||||||||| ||||||| ||||||   ||| | ||| ||||||||  || |||||||||||| | |||||||| |||  |   ||    
T  17096293 tatgtgaaatcacttattcaattaggatagaaggaaaaaaaacaactgggaggggtgattattgggtcaaaattgaccctaaatcacccctctga---ca 17096389  T
Q  98 agaagaagaaaatggtgacaactagggtttgaaaagaagagaaa 141  Q
    |||||||||||  ||||||||||||||||||| |||||||||||    
T  17096390 agaagaagaaatgggtgacaactagggtttgagaagaagagaaa 17096433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 43493939 - 43493808
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||||  |||||||| ||  ||||||||||| | |||||||| ||| ||||| ||||    
T  43493939 tatgtgaaatcacttattcaattagaatagaaggaaaaacaattcggagaggtgatttttggatcaaaattgaccctaaatcacccctctaaaaagaaga 43493840  T
Q  101 agaagaaaatggtgacaactagggtttgaaaa 132  Q
    | |||| |  |||||| |||  ||||||||||    
T  43493839 aaaagagaggggtgacgactgaggtttgaaaa 43493808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 26295118 - 26295218
Alignment:
Q  7 aaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaaga 106  Q
    |||||||||||||||| | ||||||| |||||||| |||||| ||||||||| ||  ||||||||||| | |||||||||||| ||||  ||||||||||    
T  26295118 aaatcacttattcaataaggatagaaggaaaaacacttcggaggggtgatttttggatcaaaattgaccctaaatcacctctctaaaatgaagaagaaga 26295217  T
Q  107 a 107  Q
    |    
T  26295218 a 26295218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 29097856 - 29097717
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| | ||||| ||||||||| ||||| ||||||| | || |||||||||||| | |||||||| ||   | || ||||    
T  29097856 tatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatctttgggtcaaaattgaccctaaatcacccctaggacaagaaga 29097757  T
Q  101 agaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    ||||||||  |  ||| |||||||||||| ||| ||||||    
T  29097756 agaagaaagggtcgacgactagggtttgagaaggagagaa 29097717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 6281111 - 6281005
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||| ||||||||||||||||||  |||||| |||||| ||||| || ||||||||| || ||||||||||||   |||||||| ||| ||||| ||||    
T  6281111 tatgtaaaatcacttattcaattagaatagaaggaaaaataattcagaggggtgatttttgggtcaaaattgaccataaatcacccctctaaaaagaaga 6281012  T
Q  101 agaagaa 107  Q
    |||||||    
T  6281011 agaagaa 6281005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 33164522 - 33164628
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||| | ||||||| || ||||||||||||   |||||||| |||  | ||||| |    
T  33164522 tatgtgaaatcacttattcaattaaggtagaaggaaaaacaattcggaggagtgatttttgagtcaaaattgaccataaatcacccctctgacaacaaca 33164621  T
Q  101 agaagaa 107  Q
    |||||||    
T  33164622 agaagaa 33164628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 42609211 - 42609125
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctc 87  Q
    |||||||||||||||||||||||| |||||||  |||||||||||||| | ||||||| |  |||||||||||| | ||||||||||    
T  42609211 tatgtgaaatcacttattcaattaggatagaagaaaaaacaattcggatgagtgatttttaggtcaaaattgaccctaaatcacctc 42609125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 6635317 - 6635245
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcgga-agggtgatttgtgtgtcaaaattg 72  Q
    |||||||||||||||||||||||||||||||| ||||||||| || || |||||||||| || ||||||||||    
T  6635317 tatgtgaaatcacttattcaattatgatagaaggaaaaacaactcagagagggtgatttttgggtcaaaattg 6635245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 7771888 - 7771983
Alignment:
Q  29 agaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggttt 127  Q
    |||| ||||||||||||||| ||||||||| || |||||||||||| | |||||||| ||| |||   ||||||||||||| ||||||| |||||||||    
T  7771888 agaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctaaa---aagaagaagaaaagggtgacagctagggttt 7771983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27241131 - 27241059
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattga 73  Q
    |||||||||||||||||||||||| |||| || |||||||||||| || ||||||||| || |||||||||||    
T  27241131 tatgtgaaatcacttattcaattaggataaaaggaaaaacaattcagaggggtgatttttgggtcaaaattga 27241059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 981079 - 981186
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||||||||||||  |||||||||||||||| ||||||||| ||||| ||| ||||  || |||||||||||  | ||||||||  || ||||| ||||    
T  981079 tatgtgaaatcactcgttcaattatgatagaaggaaaaacaactcggaggggcgattattgggtcaaaattgatcctaaatcacccttctaaaaagaaga 981178  T
Q  101 agaagaaa 108  Q
    ||||||||    
T  981179 agaagaaa 981186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 34431127 - 34431045
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatca 83  Q
    ||||||||||||||||||||||||  ||||||  |||||||||||| | ||||||||| || |||||||||||| | ||||||    
T  34431127 tatgtgaaatcacttattcaattaaaatagaagaaaaaacaattcgaatgggtgatttttgggtcaaaattgaccctaaatca 34431045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 20483253 - 20483147
Alignment:
Q  1 tatgtgaaatcacttattcaa-ttatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaag 99  Q
    ||||||||||||||||||||| |||  ||| || ||||||||||| ||| ||||||||| || |||||||||||  | |||||||| ||| ||||| |||    
T  20483253 tatgtgaaatcacttattcaaattagaataaaaggaaaaacaatttgga-gggtgatttttgggtcaaaattgatcctaaatcacccctccaaaaagaag 20483155  T
Q  100 aagaagaa 107  Q
    ||||||||    
T  20483154 aagaagaa 20483147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 178160 - 178246
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctc 87  Q
    |||||||||||||||||||||||| |||| || |||| |||| |||||  |||||||| || ||||||||||||   ||||||||||    
T  178160 tatgtgaaatcacttattcaattaggatataaggaaacacaactcggagaggtgatttttgagtcaaaattgaccttaaatcacctc 178246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 3740424 - 3740319
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| ||||||| | |||||||||| || || |||||| || ||||||||| || | |||||||  |||  |||| ||||    
T  3740424 tatgtgaaatcacttattcaattaggatagaa-ggaaaacaattcagatggatgatttttgagtcaaaattaaccctaaatcacacctctgaaaagaaga 3740326  T
Q  101 agaagaa 107  Q
    |||||||    
T  3740325 agaagaa 3740319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39179882 - 39179939
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 58  Q
    ||||||||||||||||||||||||  |||||| |||||| |||||||| |||||||||    
T  39179882 tatgtgaaatcacttattcaattagaatagaaggaaaaataattcggaggggtgattt 39179939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3079359 - 3079413
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 55  Q
    ||||| ||||||||||||||||||||||| || ||||||||| ||||| ||||||    
T  3079359 tatgttaaatcacttattcaattatgatataaggaaaaacaaatcggaggggtga 3079413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17687272 - 17687215
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 58  Q
    |||||||||| ||||||||||||| ||||||| ||||||||| |||||  ||||||||    
T  17687272 tatgtgaaataacttattcaattaagatagaaggaaaaacaactcggattggtgattt 17687215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 39531457 - 39531528
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    |||||||||||||||||||||||| ||||||| | ||||||| ||||| || |||||| || ||||||||||||    
T  39531457 tatgtgaaatcacttattcaattacgatagaa-ggaaaacaactcggagggatgattt-tgggtcaaaattgac 39531528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42396566 - 42396639
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    ||||||||||| |||||||||||| |||||||  ||||| |||||| || | |||||| || ||||||||||||    
T  42396566 tatgtgaaatcgcttattcaattaagatagaagaaaaaataattcgaaaagatgatttttgggtcaaaattgac 42396639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 6681928 - 6682012
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    |||||||||||||||||||||||  |||| || ||||||||| ||| | | ||||||| || | |||| ||||||| ||||||||    
T  6681928 tatgtgaaatcacttattcaattcagataaaaggaaaaacaactcgaatgagtgatttttgggccaaatttgactctaaatcacc 6682012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 23882170 - 23882254
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    ||||| |||||||||||||||||  ||||||| ||||||||||| |||  | |||||| ||  ||||||||||| | ||||||||    
T  23882170 tatgtcaaatcacttattcaatttggatagaaagaaaaacaatttggattgatgatttttgaatcaaaattgaccctaaatcacc 23882254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 23428275 - 23428226
Alignment:
Q  35 aaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcac 84  Q
    ||||||||||||||||| |||||| |  |||||||||||||| |||||||    
T  23428275 aaaaacaattcggaaggttgatttttcagtcaaaattgactctaaatcac 23428226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 5e-31; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 15590133 - 15590261
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| |||||||  ||||||||||| || ||||||||| || |||||||||||| | |||||||| |||  |||| ||||    
T  15590133 tatgtgaaatcacttattcaattaggatagaagaaaaaacaattcagaggggtgatttttgggtcaaaattgaccctaaatcacccctctgaaaagaaga 15590232  T
Q  101 agaagaaaatggtgacaactagggtttga 129  Q
    ||||||||||||| || ||||||||||||    
T  15590233 agaagaaaatggtaacgactagggtttga 15590261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 8693711 - 8693853
Alignment:
Q  1 tatgtgaaatcacttattcaattatga---tagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaaca 97  Q
    |||||||||||||||||||||||| ||   ||||| ||||||||||||||| ||||||||| || ||||||||||||   |||||||| ||| ||||| |    
T  8693711 tatgtgaaatcacttattcaattaggaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgaccttaaatcacccctctaaaaaga 8693810  T
Q  98 agaagaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    |||||||||||| ||||||  |||| |||||| ||| ||||||    
T  8693811 agaagaagaaaagggtgacggctagagtttgagaaggagagaa 8693853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 21507862 - 21507965
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||||||||||||||||||| || ||||||| ||||||||||| ||| ||||||| | || |||||||||||| | |||||||| ||| ||||| ||||    
T  21507862 tatgtgaaatcacttattcaactaggatagaaggaaaaacaatttggaggggtgatgtttgggtcaaaattgaccctaaatcacccctctaaaaagaaga 21507961  T
Q  101 agaa 104  Q
    ||||    
T  21507962 agaa 21507965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 23654317 - 23654211
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||| ||| | ||||| ||||||||| ||||| ||||||||| || |||||||||||| | ||||||||||||  | || ||||    
T  23654317 tatgtgaaatcacttattcagttaaggtagaaggaaaaacaaatcggatgggtgatttttgggtcaaaattgaccctaaatcacctctctgacaagaaga 23654218  T
Q  101 agaagaa 107  Q
    |||||||    
T  23654217 agaagaa 23654211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 31937473 - 31937556
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||| || ||||||| |||| | ||||||||    
T  31937473 tatgtgaaatcacttattcaattaggatagaa-gaaaaacaattcggaggggtgatttttgggtcaaaactgaccctaaatcacc 31937556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 6419912 - 6420018
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||| || || ||||||||| ||  ||||||||||| | |||||||| |||  | || ||||    
T  6419912 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcagaggggtgatttttggatcaaaattgaccctaaatcacccctctgacaagaaga 6420011  T
Q  101 agaagaa 107  Q
    |||||||    
T  6420012 agaagaa 6420018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 12481424 - 12481530
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| | ||||| ||||||||| ||||| ||||||||| || |||||||||||  | |||||||| |||  | || ||||    
T  12481424 tatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgatcctaaatcacccctctgacaagaaga 12481523  T
Q  101 agaagaa 107  Q
    |||||||    
T  12481524 agaagaa 12481530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14783225 - 14783307
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatca 83  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||| | ||||||| || |||||||||||| | ||||||    
T  14783225 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggcgtgatttttgggtcaaaattgaccctaaatca 14783307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 4085062 - 4084945
Alignment:
Q  24 atgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaat-ggtgacaactag 122  Q
    ||||||||| |||||||||||||||||| |||||| |  |||||||||||| | |||||||| |||  | || ||||| |||||| | ||||||||||||    
T  4085062 atgatagaaggaaaaacaattcggaaggatgatttttcggtcaaaattgaccctaaatcacccctctcagaaaaagaaaaagaaagtgggtgacaactag 4084963  T
Q  123 ggtttgaaaagaagagaa 140  Q
    ||||||| ||| ||||||    
T  4084962 ggtttgagaagcagagaa 4084945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 6296303 - 6296414
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaa-caattcggaagggtgatttgtgt--gtcaaaattgactccaaatcacctctcaaaaaaca 97  Q
    ||||||||| |||||||||||||| | ||||| |||||| |||||||||||  |||||| | |  ||||||||| |||| |||||||| ||| ||||| |    
T  6296303 tatgtgaaaccacttattcaattagggtagaaggaaaaaacaattcggaagaatgatttttttaggtcaaaattaactctaaatcacccctctaaaaaga 6296402  T
Q  98 agaagaagaaaa 109  Q
    ||||||||||||    
T  6296403 agaagaagaaaa 6296414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 6303113 - 6303224
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaa-caattcggaagggtgatttgtgt--gtcaaaattgactccaaatcacctctcaaaaaaca 97  Q
    ||||||||| |||||||||||||| | ||||| |||||| |||||||||||  |||||| | |  ||||||||| |||| |||||||| ||| ||||| |    
T  6303113 tatgtgaaaccacttattcaattagggtagaaggaaaaaacaattcggaagaatgatttttttaggtcaaaattaactctaaatcacccctctaaaaaga 6303212  T
Q  98 agaagaagaaaa 109  Q
    ||||||||||||    
T  6303213 agaagaagaaaa 6303224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 2304864 - 2305003
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||||||||||||||||||||||||| |||| | ||||||| || || || |||||| || |||||||| ||  | |||||||| ||| || || || |    
T  2304864 tatgtgaaatcacttattcaattatgacagaagggaaaacaactcagagggttgatttttgggtcaaaatcgatcctaaatcacccctctaacaagaaaa 2304963  T
Q  101 agaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    ||||||| | | | || |||| ||||||| ||| ||||||    
T  2304964 agaagaagaagataacgactaaggtttgagaaggagagaa 2305003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 19402862 - 19402968
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||||||||||||| ||||||||||||| || ||||||||| ||  | ||||||||| ||  |||||| |||| | |||||||| |||| | ||  |||    
T  19402862 tatgtgaaatcacttgttcaattatgatacaaggaaaaacaactcaaaggggtgatttttggatcaaaagtgacccgaaatcacccctcagacaaagaga 19402961  T
Q  101 agaagaa 107  Q
    |||||||    
T  19402962 agaagaa 19402968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 35219958 - 35220063
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||||| ||||||||||| |||  ||||||| ||||| ||| | ||| ||||||||| || |||||||||||| | |||||||| ||| || || ||||    
T  35219958 tatgtgatatcacttattcgattcggatagaaggaaaa-caacttggaggggtgatttttgagtcaaaattgaccctaaatcacccctccaagaagaaga 35220056  T
Q  101 agaagaa 107  Q
    |||||||    
T  35220057 agaagaa 35220063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4921935 - 4921973
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaa 39  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  4921935 tatgtgaaatcacttattcaattaagatagaaggaaaaa 4921973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23638172 - 23638221
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaag 50  Q
    |||||||||||||||||||||||||  ||||| ||||||| | |||||||    
T  23638172 tatgtgaaatcacttattcaattattgtagaaggaaaaacgactcggaag 23638221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 7e-30; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 28678184 - 28678290
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||| || |||||||||||| | |||||||| ||| ||||| ||||    
T  28678184 tatgtgaaatcacttattcaattatgatagaacgaaaaacaattcggacgagtgatttttgggtcaaaattgaccctaaatcacccctctaaaaagaaga 28678283  T
Q  101 agaagaa 107  Q
    |||||||    
T  28678284 agaagaa 28678290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 7995614 - 7995721
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctc-aaaaaacaag 99  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||  |||||||| || |||||||||||| | |||||||| |||  ||||| |||    
T  7995614 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggagaggtgatttttgggtcaaaattgaccctaaatcacccctctgaaaaagaag 7995713  T
Q  100 aagaagaa 107  Q
    ||||||||    
T  7995714 aagaagaa 7995721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 424345 - 424451
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||| ||||||||| || |||||||||||| | |||||||| |||  | || ||||    
T  424345 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctgacaagaaga 424444  T
Q  101 agaagaa 107  Q
    |||||||    
T  424445 agaagaa 424451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 33487088 - 33487190
Alignment:
Q  5 tgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaa 104  Q
    ||||||||| |||||||||| ||||||| ||||||||||||||| ||||||||| || |||||||||||| | |||||||| |||  |||| ||||||||    
T  33487088 tgaaatcacatattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctgaaaagaagaagaa 33487187  T
Q  105 gaa 107  Q
    |||    
T  33487188 gaa 33487190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 42490960 - 42490854
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||| |  |||||| ||||| | ||||||||||||  | || ||||    
T  42490960 tatgtgaaatcacttattcaattaagatagaacgaaaaacaattcggaggggtgatttttaggtcaaacttgaccctaaatcacctctctgacaagaaga 42490861  T
Q  101 agaagaa 107  Q
    |||||||    
T  42490860 agaagaa 42490854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 29205348 - 29205210
Alignment:
Q  5 tgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaa--- 101  Q
    |||||||||||||||||||||||||||| ||||||||||||  | ||||||||| || |||||||||||| | ||||||||  || ||||| |||||       
T  29205348 tgaaatcacttattcaattatgatagaaggaaaaacaattccaaggggtgatttttgggtcaaaattgaccctaaatcacccgtctaaaaagaagaagac 29205249  T
Q  102 gaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    |||||||| || |||  ||||||||||| ||| ||||||    
T  29205248 gaagaaaagggcgacggctagggtttgagaaggagagaa 29205210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 32784175 - 32784091
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    |||||||||||||||||||||| | ||||||| ||||||||||||||| ||||||||| || |||||||||||| | ||||||||    
T  32784175 tatgtgaaatcacttattcaataaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacc 32784091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 4882413 - 4882519
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||| ||||||||| || ||| |||||||||| ||||| ||  ||  |||| ||||    
T  4882413 tatgtgaaatcacttattcaattaggatataatgaaaaacaaatcggaggggtgatttttgggtcgaaattgactctaaatcgcccatctgaaaagaaga 4882512  T
Q  101 agaagaa 107  Q
    |||||||    
T  4882513 agaagaa 4882519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 42276423 - 42276299
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||| ||||| |||||||||||||  |||||||||||||| ||||||||| |||||||||| | || | |||||||| |||  ||   ||||    
T  42276423 tatgtgaaatcagttatttaattatgatagaagaaaaaacaattcggaggggtgattt-tgtgtcaaaaataaccctaaatcacccctctgaa---aaga 42276328  T
Q  101 agaagaaaatggtgacaactagggtttga 129  Q
    ||||||||| |||||| ||||||||||||    
T  42276327 agaagaaaagggtgacgactagggtttga 42276299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 12871688 - 12871604
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    ||||||||||||||||||| |||| |||| |||||||||||| ||||| ||||||||| || |||||||||||| | ||||||||    
T  12871688 tatgtgaaatcacttattcgattaggatataatgaaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcacc 12871604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 20411640 - 20411532
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||   ||| || ||||||||||||||| ||||||||| || ||||||||||||   ||||||||  || ||||| ||||    
T  20411640 tatgtgaaatcacttattcaatttgaataaaaagaaaaacaattcggatgggtgatttttgggtcaaaattgaccataaatcacccatctaaaaagaaga 20411541  T
Q  101 agaagaaaa 109  Q
    |||||||||    
T  20411540 agaagaaaa 20411532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37822399 - 37822471
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattga 73  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| ||||||| |||| || |||||||||||    
T  37822399 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcagaagggtaatttttgggtcaaaattga 37822471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 3232855 - 3232749
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||| ||||||||| |   ||||||||||| | ||||||||  ||  |||| ||||    
T  3232855 tatgtgaaatcatttattcaattaggatagaaggaaaaacaattcggaggggtgattttttgatcaaaattgaccctaaatcacccatctgaaaagaaga 3232756  T
Q  101 agaagaa 107  Q
    |||||||    
T  3232755 agaagaa 3232749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 44517214 - 44517157
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 58  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||    
T  44517214 tatgtgaaatcacttattgaattaggatagaaggaaaaacaattcggaagggtgattt 44517157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 14265351 - 14265267
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    |||||||||||||||||| ||||| ||||||| ||||||||  ||||| ||||||||| | ||||||||||||| | ||||||||    
T  14265351 tatgtgaaatcacttatttaattaggatagaaggaaaaacagctcggaggggtgatttttttgtcaaaattgaccctaaatcacc 14265267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 4871080 - 4871186
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||| |||||||||||||  ||| || |||||||||||||||  |||||||| || |||||||||||    ||||||||  |||||||| ||||    
T  4871080 tatgtgaaataacttattcaattagaataaaaggaaaaacaattcggagtggtgatttatgagtcaaaattgatcttaaatcacccgtcaaaaaagaaga 4871179  T
Q  101 agaagaa 107  Q
    |||||||    
T  4871180 agaagaa 4871186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 27534766 - 27534660
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| | ||||| ||||||||| ||||| || |||||| || |||||||||||| | |||||| | |||  | || ||||    
T  27534766 tatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggagggatgatttttgggtcaaaattgaccctaaatcatccctctgacaagaaga 27534667  T
Q  101 agaagaa 107  Q
    |||||||    
T  27534666 agaagaa 27534660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 13488590 - 13488699
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatca-cctctca-aaaaacaa 98  Q
    ||||| |||||||||||||||||| | | ||| ||||||||| ||||| ||||||||| || |||||||| ||| | |||||| ||||| | || |||||    
T  13488590 tatgtaaaatcacttattcaattaaggtggaaggaaaaacaaatcggatgggtgatttttgggtcaaaatcgaccctaaatcaccctctgacaacaacaa 13488689  T
Q  99 gaagaagaaa 108  Q
    ||||||||||    
T  13488690 gaagaagaaa 13488699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 17347664 - 17347584
Alignment:
Q  2 atgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatca 83  Q
    ||||||||||||||||||  |||||||||||  |||||||| ||||| ||||||||| || |||||||||||| | ||||||    
T  17347664 atgtgaaatcacttattcctttatgatagaagaaaaaacaactcggatgggtgatttttg-gtcaaaattgaccctaaatca 17347584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 18343681 - 18343575
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||| ||| ||||| | ||||| ||||||||| ||| | ||||||||| || |||||||||||  | |||||||| |||  | ||||| |    
T  18343681 tatgtgaaatcactcatttaattaaggtagaaggaaaaacaaatcgaaggggtgatttttgggtcaaaattgatcctaaatcacccctctgacaacaaca 18343582  T
Q  101 agaagaa 107  Q
    |||||||    
T  18343581 agaagaa 18343575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 33125865 - 33125946
Alignment:
Q  6 gaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctct 88  Q
    |||||||||||||||||||| | |||| |||||||||||  || | ||||||| || |||||||||||| | |||||||||||    
T  33125865 gaaatcacttattcaattataaaagaaggaaaaacaatttagatgagtgattt-tgggtcaaaattgaccctaaatcacctct 33125946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 33939082 - 33939180
Alignment:
Q  27 atagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggt 125  Q
    |||||| |||||||||||| || ||||||||| || |||||||||||| | |||||||| ||| ||||| ||| | || |||  |||||||| ||||||    
T  33939082 atagaaagaaaaacaattcagaggggtgatttttgggtcaaaattgaccctaaatcacccctctaaaaagaaggaaaaaaaaggggtgacaattagggt 33939180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 15791554 - 15791614
Alignment:
Q  13 cttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattga 73  Q
    |||||||||||| |||| || ||||||||| ||||| | ||||||| ||||||||||||||    
T  15791554 cttattcaattaagatataaggaaaaacaactcggatgagtgatttttgtgtcaaaattga 15791614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 45193680 - 45193718
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaa 39  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  45193680 tatgtgaaatcacttattcaattaggatagaaggaaaaa 45193718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 45750545 - 45750439
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||| ||||||||||||| |||| || ||||||  | |||||  | |||||| || ||||||||||||   |||||||| |||  |||| ||||    
T  45750545 tatgtgaaataacttattcaattaggataaaaggaaaaaacaatcggattgatgatttttgggtcaaaattgaccttaaatcacccctctgaaaagaaga 45750446  T
Q  101 agaagaa 107  Q
    |||||||    
T  45750445 agaagaa 45750439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10627067 - 10627010
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 58  Q
    |||||||||| ||||||||||||| |||| || ||||||||| ||||| || ||||||    
T  10627067 tatgtgaaattacttattcaattaggatataaagaaaaacaactcggagggatgattt 10627010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 3e-26; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 24791230 - 24791358
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||| |||||||||||| ||||| |||| || ||||||||||||||| || |||||| || ||||||||||||   |||||||| ||| ||||| ||||    
T  24791230 tatgttaaatcacttattgaattaggatataaggaaaaacaattcggatggatgatttttgggtcaaaattgaccataaatcacccctctaaaaagaaga 24791329  T
Q  101 agaagaaaatggtgacaactagggtttga 129  Q
    ||||||||| ||||||||||||| |||||    
T  24791330 agaagaaaagggtgacaactaggatttga 24791358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 9501657 - 9501517
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaa-caattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaag 99  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||| || ||||||||| ||  ||||||||||| | |||||||| ||  ||||| |||    
T  9501657 tatgtgaaatcacttattcaattaggatagaaggaaaaaacaattcagatgggtgatttttggatcaaaattgaccctaaatcaccactttaaaaagaag 9501558  T
Q  100 aagaagaaaatggtgacaactagggtttgaaaagaagagaa 140  Q
    |||||||||| | ||||  ||||||||||| ||| ||||||    
T  9501557 aagaagaaaaggatgacggctagggtttgagaaggagagaa 9501517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 37612720 - 37612612
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||||||||||||||||||| || ||||||| |||||| |||||||| ||||||||| || |||||||||||| | |||||||| ||| ||||| ||||    
T  37612720 tatgtgaaatcacttattcaactaggatagaaggaaaaaaaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctaaaaagaaga 37612621  T
Q  101 agaagaaaa 109  Q
    |||| ||||    
T  37612620 agaaaaaaa 37612612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 31407810 - 31407916
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||| |||||||| |||||||||| |||||||||||||||  | |||||| || |||||||||||| | |||||||| ||| ||||| ||||    
T  31407810 tatgtgaaatcatttattcaactatgatagaaggaaaaacaattcggagagatgatttttgggtcaaaattgaccctaaatcacccctctaaaaataaga 31407909  T
Q  101 agaagaa 107  Q
    |||||||    
T  31407910 agaagaa 31407916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 1810283 - 1810405
Alignment:
Q  2 atgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaa 101  Q
    ||||||||||||||||| ||||| ||||||| |||||| || ||||| ||||||||| || |||||||||||| | |||||||| ||| |||   |||||    
T  1810283 atgtgaaatcacttattgaattaggatagaa-gaaaaaaaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctaaa---aagaa 1810378  T
Q  102 gaagaaaatggtgacaactagggtttg 128  Q
    |||||||| |||||| |||||||||||    
T  1810379 gaagaaaagggtgacgactagggtttg 1810405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 31202525 - 31202419
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||||||||||||||||||||||| |||||| ||||||||||| ||| || |||||| || ||||||||||||   ||||||||  || ||||| ||||    
T  31202525 tatgtgaaatcacttattcaattataatagaaagaaaaacaatttggatggatgatttttgggtcaaaattgaccttaaatcacccatctaaaaagaaga 31202426  T
Q  101 agaagaa 107  Q
    |||||||    
T  31202425 agaagaa 31202419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10338884 - 10338957
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    |||||||||||||||||||||||| |||| || ||||||||||||||| ||||||||| || ||||||||||||    
T  10338884 tatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgatttttgcgtcaaaattgac 10338957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 12329693 - 12329609
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    |||||||||||||||||||||||| |||| || ||||||||||||| || |||||||| ||  ||||||||||||| ||||||||    
T  12329693 tatgtgaaatcacttattcaattaggataaaaggaaaaacaattcgaaatggtgatttttggatcaaaattgactctaaatcacc 12329609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 30026942 - 30027026
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    ||||||||||||||||||||||||||||||||  |||||||| ||||| ||||||||| || ||||||| |||| | ||||||||    
T  30026942 tatgtgaaatcacttattcaattatgatagaagaaaaaacaactcggatgggtgatttttgggtcaaaaatgaccctaaatcacc 30027026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 14600760 - 14600866
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||| ||||||||||| |||||||  |||||||| ||||| || |||||| || |||||||||||| | |||||||||||| || || || |    
T  14600760 tatgtgaaatcagttattcaattaggatagaagaaaaaacaactcggatggatgatttttgggtcaaaattgaccctaaatcacctctctaacaagaaaa 14600859  T
Q  101 agaagaa 107  Q
    |||||||    
T  14600860 agaagaa 14600866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 39067751 - 39067857
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||| ||||  ||||||| || ||||||||||||   |||||||| |||  |||| ||||    
T  39067751 tatgtgaaatcacttattaaattaggatagaaggaaaaacaatttggaacagtgatttttgggtcaaaattgaccttaaatcacccctcttaaaagaaga 39067850  T
Q  101 agaagaa 107  Q
    |||||||    
T  39067851 agaagaa 39067857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41361799 - 41361726
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    |||||||||||||||||||||||| | ||||| ||||||||| ||||| ||||||||| || ||||||||||||    
T  41361799 tatgtgaaatcacttattcaattacggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgac 41361726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 2025272 - 2025378
Alignment:
Q  2 atgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaa 101  Q
    |||||||||||||||||||||||  ||| || ||||||||| | ||||||||||||| |  ||||||||||||   |||||||| ||| || || |||||    
T  2025272 atgtgaaatcacttattcaattagaataaaaggaaaaacaacttggaagggtgattttttggtcaaaattgaccataaatcacccctctaacaagaagaa 2025371  T
Q  102 gaagaaa 108  Q
    |||||||    
T  2025372 gaagaaa 2025378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 23971156 - 23971262
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    ||||||||||||||||||||||||  |||||| ||||||||| ||||| | ||||||| |  ||||||||| |||  |||||||||||| || || || |    
T  23971156 tatgtgaaatcacttattcaattagaatagaaggaaaaacaactcggatgagtgattttttggtcaaaatttactttaaatcacctctctaacaagaaaa 23971255  T
Q  101 agaagaa 107  Q
    |||||||    
T  23971256 agaagaa 23971262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 1039955 - 1040062
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||| |||||  |||||| ||||| ||||||||| ||||||||| ||  |||||||||||   |||||| | ||| ||||| ||||    
T  1039955 tatgtgaaatcacttattgaattagaatagaaggaaaaccaattcggatgggtgatttttggatcaaaattgaccttaaatcatc-ctctaaaaagaaga 1040053  T
Q  101 agaagaaaa 109  Q
    |||||||||    
T  1040054 agaagaaaa 1040062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 13570788 - 13570872
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 85  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||| |  |||||| |   ||||||||||||| ||||||||    
T  13570788 tatgtgaaatcacttatttaattaggatagaatgaaaaacaattgggatgaatgatttttagatcaaaattgactctaaatcacc 13570872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 10148014 - 10147907
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaa-tgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaag 99  Q
    |||||||||||||||||||||||| |||||||   |||||||| ||||| ||||||||  || |||||||||||| | |||||||| ||| || |  |||    
T  10148014 tatgtgaaatcacttattcaattaggatagaagaaaaaaacaactcggaggggtgattattgggtcaaaattgaccctaaatcacccctctaacatgaag 10147915  T
Q  100 aagaagaa 107  Q
    ||||||||    
T  10147914 aagaagaa 10147907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2234532 - 2234602
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaatt 71  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||| | ||||||||| ||  ||||||||    
T  2234532 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcgaaggggtgatttttggatcaaaatt 2234602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 11161948 - 11161843
Alignment:
Q  2 atgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaa 101  Q
    ||||||||| ||||||||||||| |||| || ||||||||| | | | ||||||||| || |||||||||||| | |||| ||| ||| || || |||||    
T  11161948 atgtgaaatgacttattcaattaggatataaagaaaaacaacttgaaggggtgatttttgggtcaaaattgaccctaaattacccctctaacaagaagaa 11161849  T
Q  102 gaagaa 107  Q
    ||||||    
T  11161848 gaagaa 11161843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37128548 - 37128600
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggt 53  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||| ||||    
T  37128548 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggatgggt 37128600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31308215 - 31308168
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcgga 48  Q
    |||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  31308215 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcgga 31308168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3204818 - 3204899
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatca 83  Q
    |||||||||||||| ||| |||||  |||||  |||||||||||||| ||||| |||| || |||||||||||||| ||||||    
T  3204818 tatgtgaaatcactcattaaattagaatagatggaaaaacaattcgg-agggtaatttttgggtcaaaattgactctaaatca 3204899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4757232 - 4757191
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaa 42  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  4757232 tatgtgaaatcatttatttaattatgatagaaggaaaaacaa 4757191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 7281707 - 7281655
Alignment:
Q  6 gaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 58  Q
    |||||||||||||||| ||  | |||| ||||||||||||||| |||||||||    
T  7281707 gaaatcacttattcaactagaaaagaaagaaaaacaattcggatgggtgattt 7281655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 30039399 - 30039466
Alignment:
Q  6 gaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    |||||||| ||||||||||  | |||| ||||||||||||||| | ||||||| || ||||||||||||    
T  30039399 gaaatcacatattcaattagaaaagaaggaaaaacaattcggatgagtgattt-tgggtcaaaattgac 30039466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 2969 - 2830
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaa--caattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaa 98  Q
    |||||||||||||||||||||||| ||||||| ||||||  ||| ||||| ||||||||  || |||||||||||| | |||||||| ||| ||   |||    
T  2969 tatgtgaaatcacttattcaattaggatagaaggaaaaaaacaactcggaggggtgattattgggtcaaaattgaccctaaatcacccctctaa---caa 2873  T
Q  99 gaagaagaaaatggtgacaactagggtttgaaaagaagagaaa 141  Q
    ||||||||||  |||||| |||||||||||| |||||||||||    
T  2872 gaagaagaaaggggtgacgactagggtttgagaagaagagaaa 2830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 35149 - 35062
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctct 88  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||| ||||||||| || |||||||||||| | |||||||||||    
T  35149 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggatgggtgatttttgggtcaaaattgaccctaaatcacctct 35062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 74231 - 74148
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcac 84  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||| || ||||||||||| || |||||||    
T  74231 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgattctaaatcac 74148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 6204 - 6098
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaaga 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||| ||||||||| || |||||||||||| | |||||||| |||  | || ||||    
T  6204 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctgacaagaaga 6105  T
Q  101 agaagaa 107  Q
    |||||||    
T  6104 agaagaa 6098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 2471 - 2600
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaa--aaaacaa 98  Q
    ||||||||||||||||||| |||||||||||| ||||||||| || | |||||||||| || ||||||| |||| | |||||||| ||  |  | || ||    
T  2471 tatgtgaaatcacttattcgattatgatagaaggaaaaacaactcag-agggtgatttttgggtcaaaaatgaccctaaatcacccctagaggataaaaa 2569  T
Q  99 gaagaagaaaatggtgacaactagggtttga 129  Q
    ||||||||||| |||||| ||||||||||||    
T  2570 gaagaagaaaagggtgacgactagggtttga 2600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1140 - 1213
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||| | ||||||||| || ||||||||||||    
T  1140 tatgtgaaatcacttattcaattagggtagaaggaaaaacaattcgcaggggtgatttttgggtcaaaattgac 1213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42 - 1
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaa 42  Q
    |||||||||||||||||||||||| ||||||| |||||||||    
T  42 tatgtgaaatcacttattcaattaagatagaaggaaaaacaa 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 7178 - 7245
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaa 68  Q
    |||||||||||||||||||||||| |||| || ||||||||||||||| ||||||||| || ||||||    
T  7178 tatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgatttttgggtcaaa 7245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 404312 - 404385
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 74  Q
    |||||||||||||||||||||||| ||||| | ||||||| ||||||| ||||||||| ||  |||||||||||    
T  404312 tatgtgaaatcacttattcaattaggatagcaagaaaaactattcggatgggtgatttttggatcaaaattgac 404385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 13300 - 13411
Alignment:
Q  2 atgtgaaatcacttattcaattatgat----agaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctc--aaaaaa 95  Q
    ||||||||||||||||||||||| |||    | ||  |||||||||||||| ||||||||| ||  ||||||||||| | ||||||||||||  |||| |    
T  13300 atgtgaaatcacttattcaattaggataaaaaaaaaaaaaaacaattcggaggggtgatttttggatcaaaattgaccctaaatcacctctctgaaaaga 13399  T
Q  96 caagaagaagaa 107  Q
     |||||||||||    
T  13400 aaagaagaagaa 13411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1641 - 1605
Alignment:
Q  1 tatgtgaaatcacttattcaattatgatagaatgaaa 37  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  1641 tatgtgaaatcacttattcaattatggtagaaggaaa 1605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University