View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9261_high_30 (Length: 222)

Name: NF9261_high_30
Description: NF9261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9261_high_30
NF9261_high_30
[»] chr6 (5 HSPs)
chr6 (81-171)||(24497703-24497793)
chr6 (10-74)||(24498223-24498287)
chr6 (10-74)||(12285710-12285775)
chr6 (10-74)||(12314066-12314131)
chr6 (92-171)||(12313470-12313549)
[»] chr7 (7 HSPs)
chr7 (10-74)||(17364747-17364811)
chr7 (10-74)||(43941801-43941865)
chr7 (81-171)||(41678355-41678445)
chr7 (81-171)||(17364184-17364274)
chr7 (81-171)||(43942339-43942429)
chr7 (10-74)||(41678921-41678982)
chr7 (95-169)||(22708128-22708202)
[»] chr5 (13 HSPs)
chr5 (10-74)||(26700777-26700841)
chr5 (83-171)||(26701316-26701404)
chr5 (10-74)||(26970510-26970574)
chr5 (83-171)||(26971049-26971137)
chr5 (81-171)||(25073705-25073795)
chr5 (81-171)||(25131676-25131766)
chr5 (10-74)||(40690312-40690376)
chr5 (10-74)||(19545546-19545610)
chr5 (81-171)||(19546132-19546222)
chr5 (81-171)||(40690859-40690949)
chr5 (81-171)||(41309974-41310064)
chr5 (10-74)||(25073168-25073234)
chr5 (10-74)||(25131139-25131205)
[»] chr1 (5 HSPs)
chr1 (10-74)||(20572432-20572496)
chr1 (10-74)||(27301865-27301929)
chr1 (81-171)||(20569822-20569912)
chr1 (81-171)||(26473945-26474035)
chr1 (81-150)||(27301374-27301442)
[»] chr8 (4 HSPs)
chr8 (80-171)||(5660841-5660932)
chr8 (10-74)||(18559363-18559427)
chr8 (10-74)||(5660350-5660414)
chr8 (84-171)||(18558807-18558894)
[»] chr2 (2 HSPs)
chr2 (10-74)||(26223174-26223238)
chr2 (85-171)||(26223743-26223829)
[»] scaffold0074 (1 HSPs)
scaffold0074 (95-171)||(20465-20541)
[»] scaffold0028 (1 HSPs)
scaffold0028 (95-171)||(18123-18199)


Alignment Details
Target: chr6 (Bit Score: 67; Significance: 6e-30; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 81 - 171
Target Start/End: Complemental strand, 24497793 - 24497703
Alignment:
Q  81 tggcggctacgtaaaaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcggct 171  Q
    |||||||||||||||||||||||||||||||| | ||||||  ||||||||||||||||||||||||||| |||| |||||||||||||||    
T  24497793 tggcggctacgtaaaaactgccgctttaaacattgtggcaggcaaaatttcggcagtttttaaaacgccagaattgtgcatagtggcggct 24497703  T

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Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 24498287 - 24498223
Alignment:
Q  10 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24498287 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 24498223  T

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Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 12285775 - 12285710
Alignment:
Q  10 catttttatgttttgaaacttgttatttt-gagaatagctaaagatggtggcaatggtttgtgtaa 74  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  12285775 catttttatgttttgaaacttgttatttttgagaattgctaaagatggtggcaatggtttgtgtaa 12285710  T

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Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 12314131 - 12314066
Alignment:
Q  10 catttttatgttttgaaacttgtta-ttttgagaatagctaaagatggtggcaatggtttgtgtaa 74  Q
    ||||||||||||||||||||||||| |||| ||||| || ||||||||||||||||||||||||||    
T  12314131 catttttatgttttgaaacttgttatttttaagaattgcgaaagatggtggcaatggtttgtgtaa 12314066  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 12313549 - 12313470
Alignment:
Q  92 taaaaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcggct 171  Q
    |||||||| ||| |||||||  | ||| ||| |||||||||||| ||||| ||||||||||||| |||||| || |||||    
T  12313549 taaaaactaccgatttaaactttgtggtagacaaaatttcggcaatttttgaaacgccaaaattgtgcatactgacggct 12313470  T

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Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 17364811 - 17364747
Alignment:
Q  10 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17364811 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 17364747  T

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Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 43941801 - 43941865
Alignment:
Q  10 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43941801 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 43941865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 171
Target Start/End: Complemental strand, 41678445 - 41678355
Alignment:
Q  81 tggcggctacgtaaaaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcggct 171  Q
    |||||||||||||||||||||||||||||||| | ||||||  |||||||||| |||||||||||||||| |||| || ||||||||||||    
T  41678445 tggcggctacgtaaaaactgccgctttaaacattgtggcaggcaaaatttcggtagtttttaaaacgccagaattgtgtatagtggcggct 41678355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 81 - 171
Target Start/End: Complemental strand, 17364274 - 17364184
Alignment:
Q  81 tggcggctacgtaaaaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcggct 171  Q
    |||||| ||||||||||||||||||||||||| | ||| ||  ||||||||||||||||||||||||||| |||| | |||||||||||||    
T  17364274 tggcggttacgtaaaaactgccgctttaaacattgtggtaggcaaaatttcggcagtttttaaaacgccagaattgtacatagtggcggct 17364184  T

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Target: chr7; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 81 - 171
Target Start/End: Original strand, 43942339 - 43942429
Alignment:
Q  81 tggcggctacgtaaaaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcggct 171  Q
    |||||||||||||||||||||| ||||||||  | ||||||  ||||| ||||||||||||||||||||| |||| |||||||||||||||    
T  43942339 tggcggctacgtaaaaactgccactttaaaccttgtggcaggcaaaatatcggcagtttttaaaacgccagaattgtgcatagtggcggct 43942429  T

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Target: chr7; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 41678982 - 41678921
Alignment:
Q  10 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 74  Q
    |||||||||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||    
T  41678982 catttttatgttttgaaactt---attttgataatagctaaagatggtggcaatggtttgtgtaa 41678921  T

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Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 22708202 - 22708128
Alignment:
Q  95 aaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcgg 169  Q
    |||| ||||||||||||  | ||||||| |||||| |||||||||| ||| ||||| |||| ||||||| |||||    
T  22708202 aaaccgccgctttaaactttgtggcagacaaaattccggcagttttgaaaccgccagaattgtgcatagcggcgg 22708128  T

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Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 26700777 - 26700841
Alignment:
Q  10 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26700777 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 26700841  T

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Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 171
Target Start/End: Original strand, 26701316 - 26701404
Alignment:
Q  83 gcggctacgtaaaaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcggct 171  Q
    ||||||||||||||||||||||||| |||| | ||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||    
T  26701316 gcggctacgtaaaaactgccgcttttaacattgtggcagacaaaatttcggcagtttttaaaacgccagaattgtgcatagtggcggct 26701404  T

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Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 26970510 - 26970574
Alignment:
Q  10 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970510 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 26970574  T

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Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 171
Target Start/End: Original strand, 26971049 - 26971137
Alignment:
Q  83 gcggctacgtaaaaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcggct 171  Q
    ||||||||||||||||||||||||| |||| | ||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||    
T  26971049 gcggctacgtaaaaactgccgcttttaacattgtggcagacaaaatttcggcagtttttaaaacgccagaattgtgcatagtggcggct 26971137  T

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Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 171
Target Start/End: Original strand, 25073705 - 25073795
Alignment:
Q  81 tggcggctacgtaaaaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcggct 171  Q
    |||||||| ||||||||||||||||||||||| | ||||||  ||||||||||||||||||||||||||| |||| |||||||||||||||    
T  25073705 tggcggcttcgtaaaaactgccgctttaaacattgtggcaggcaaaatttcggcagtttttaaaacgccagaattgtgcatagtggcggct 25073795  T

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Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 171
Target Start/End: Original strand, 25131676 - 25131766
Alignment:
Q  81 tggcggctacgtaaaaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcggct 171  Q
    |||||||| ||||||||||||||||||||||| | ||||||  ||||||||||||||||||||||||||| |||| |||||||||||||||    
T  25131676 tggcggcttcgtaaaaactgccgctttaaacattgtggcaggcaaaatttcggcagtttttaaaacgccagaattgtgcatagtggcggct 25131766  T

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Target: chr5; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 40690312 - 40690376
Alignment:
Q  10 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40690312 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggaaatggtttgtgtaa 40690376  T

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Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 19545546 - 19545610
Alignment:
Q  10 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  19545546 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggaaatggtttttgtaa 19545610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 81 - 171
Target Start/End: Original strand, 19546132 - 19546222
Alignment:
Q  81 tggcggctacgtaaaaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcggct 171  Q
    |||||||||||||||||||||||||||||||| | || |||   ||||||||||||||||| |||||||| |||| |||||||||||||||    
T  19546132 tggcggctacgtaaaaactgccgctttaaacattgtgccaggcgaaatttcggcagtttttgaaacgccagaattgtgcatagtggcggct 19546222  T

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Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 171
Target Start/End: Original strand, 40690859 - 40690949
Alignment:
Q  81 tggcggctacgtaaaaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcggct 171  Q
    ||||||||||||||||| | | |||||||||| | ||||||   |||||||||||||||||||||||||| |||| |||||||||||||||    
T  40690859 tggcggctacgtaaaaattcctgctttaaacattgtggcaggcgaaatttcggcagtttttaaaacgccagaattgtgcatagtggcggct 40690949  T

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Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 171
Target Start/End: Original strand, 41309974 - 41310064
Alignment:
Q  81 tggcggctacgtaaaaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcggct 171  Q
    |||||||||||||||||||||||||||||||| | ||||||   |||||||||||||| || ||||| || |||| |||||||||||||||    
T  41309974 tggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagttcttgaaacggcagaattgtgcatagtggcggct 41310064  T

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Target: chr5; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 25073168 - 25073234
Alignment:
Q  10 catttttatgttttgaaacttgttattttgagaatagct--aaagatggtggcaatggtttgtgtaa 74  Q
    ||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||| |||||    
T  25073168 catttttatgttttgaaacttgttattttgagaattgctaaaaagatggtggcaatggtttatgtaa 25073234  T

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Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 25131139 - 25131205
Alignment:
Q  10 catttttatgttttgaaacttgttattttgagaatagct--aaagatggtggcaatggtttgtgtaa 74  Q
    ||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||| |||||    
T  25131139 catttttatgttttgaaacttgttattttgagaattgctaaaaagatggtggcaatggtttatgtaa 25131205  T

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Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 20572496 - 20572432
Alignment:
Q  10 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20572496 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 20572432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 27301929 - 27301865
Alignment:
Q  10 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27301929 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 27301865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 81 - 171
Target Start/End: Complemental strand, 20569912 - 20569822
Alignment:
Q  81 tggcggctacgtaaaaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcggct 171  Q
    ||||||||||||||||| |||||||||||||| | ||||||  |||||||||||| |||||||||||||| |||| | |||||||||||||    
T  20569912 tggcggctacgtaaaaaatgccgctttaaacattgtggcaggcaaaatttcggcaatttttaaaacgccagaattatacatagtggcggct 20569822  T

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Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 171
Target Start/End: Original strand, 26473945 - 26474035
Alignment:
Q  81 tggcggctacgtaaaaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcggct 171  Q
    |||||||||||||||||||||| ||||||||  | | ||||  ||||| ||||||||||||||||||||| |||| |||||||||||||||    
T  26473945 tggcggctacgtaaaaactgccactttaaaccttgtagcaggcaaaatatcggcagtttttaaaacgccagaattgtgcatagtggcggct 26474035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 27301442 - 27301374
Alignment:
Q  81 tggcggctacgtaaaaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgcca 150  Q
    ||||||||||||||||||||| |||||||||| | ||||||  ||||||||||||| |||||||||||||    
T  27301442 tggcggctacgtaaaaactgctgctttaaacattgtggcaggcaaaatttcggcag-ttttaaaacgcca 27301374  T

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Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 171
Target Start/End: Original strand, 5660841 - 5660932
Alignment:
Q  80 gtggcggctacgtaaaaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcggct 171  Q
    ||||||||||||||||||||||||||||||||| | ||||||  |||||||||||||||||||||||||| ||||| | |||||||||||||    
T  5660841 gtggcggctacgtaaaaactgccgctttaaacattgtggcaggcaaaatttcggcagtttttaaaacgcctaaattgtacatagtggcggct 5660932  T

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Target: chr8; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 18559427 - 18559363
Alignment:
Q  10 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18559427 catttttatgttttgaaacttgttattttgagaatagctaaagatagtggcaatggtttgtgtaa 18559363  T

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Target: chr8; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 5660350 - 5660414
Alignment:
Q  10 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  5660350 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcgatggtttgcgtaa 5660414  T

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Target: chr8; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 18558894 - 18558807
Alignment:
Q  84 cggctacgtaaaaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcggct 171  Q
    ||||||| |||||||||||| |||||||| | ||||||  ||||||||||||||||||||||||||| |||| |||||||||||||||    
T  18558894 cggctacataaaaactgccgttttaaacattgtggcaggcaaaatttcggcagtttttaaaacgccagaattatgcatagtggcggct 18558807  T

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Target: chr2 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 26223174 - 26223238
Alignment:
Q  10 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggcaatggtttgtgtaa 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26223174 catttttatgttttgaaacttgttattttgagaatagctaaagatggtggaaatggtttgtgtaa 26223238  T

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Target: chr2; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 26223743 - 26223829
Alignment:
Q  85 ggctacgtaaaaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcggct 171  Q
    |||||||||||||||||||||||||||| | ||||||   |||||||||||||| || ||||| || |||| |||||||||||||||    
T  26223743 ggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagttcttgaaacgtcagaattgtgcatagtggcggct 26223829  T

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Target: scaffold0074 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 20465 - 20541
Alignment:
Q  95 aaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcggct 171  Q
    |||| ||||||||||||  | ||||||| ||||||||||||||||| ||| ||||| || | | ||||| |||||||    
T  20465 aaaccgccgctttaaactttgtggcagacaaaatttcggcagttttgaaaccgccagaaatgtacatagcggcggct 20541  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 18199 - 18123
Alignment:
Q  95 aaactgccgctttaaacaatttggcagataaaatttcggcagtttttaaaacgccaaaattttgcatagtggcggct 171  Q
    |||| ||||||||||||  | ||| ||| ||||||||||||||||| ||| ||||| || | | |||||||||||||    
T  18199 aaaccgccgctttaaactttgtggtagacaaaatttcggcagttttgaaaccgccagaaatgtacatagtggcggct 18123  T

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