View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9261_low_4 (Length: 1016)

Name: NF9261_low_4
Description: NF9261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9261_low_4
NF9261_low_4
[»] chr5 (22 HSPs)
chr5 (449-729)||(1758778-1759058)
chr5 (722-1005)||(1759281-1759555)
chr5 (1-199)||(1758342-1758540)
chr5 (1-199)||(29568072-29568275)
chr5 (546-729)||(38866863-38867046)
chr5 (513-715)||(29250415-29250617)
chr5 (1-199)||(27918844-27919045)
chr5 (546-710)||(29426336-29426500)
chr5 (1-199)||(29168449-29168652)
chr5 (541-727)||(29169362-29169548)
chr5 (387-517)||(29250127-29250257)
chr5 (541-710)||(29566527-29566696)
chr5 (275-380)||(1758676-1758781)
chr5 (4-199)||(29425493-29425699)
chr5 (1-131)||(38157462-38157592)
chr5 (541-714)||(32432111-32432284)
chr5 (275-347)||(29425844-29425916)
chr5 (275-347)||(27919187-27919259)
chr5 (275-347)||(29168743-29168815)
chr5 (275-347)||(29567858-29567930)
chr5 (344-411)||(29567215-29567281)
chr5 (815-875)||(1754206-1754265)
[»] chr4 (40 HSPs)
chr4 (514-719)||(27463021-27463226)
chr4 (517-719)||(27483396-27483598)
chr4 (511-727)||(18987740-18987956)
chr4 (517-719)||(27471623-27471825)
chr4 (513-719)||(27519798-27520004)
chr4 (1-199)||(27462194-27462392)
chr4 (1-199)||(27521043-27521241)
chr4 (1-199)||(27482333-27482532)
chr4 (344-517)||(27520380-27520553)
chr4 (344-517)||(18987200-18987369)
chr4 (1-186)||(18986294-18986480)
chr4 (722-882)||(27505659-27505809)
chr4 (722-882)||(27479934-27480084)
chr4 (722-882)||(27523360-27523510)
chr4 (722-882)||(27526069-27526219)
chr4 (722-881)||(27516567-27516716)
chr4 (275-347)||(18986615-18986687)
chr4 (275-347)||(27520829-27520901)
chr4 (344-423)||(27471494-27471573)
chr4 (722-881)||(27473925-27474074)
chr4 (722-904)||(27487016-27487188)
chr4 (731-884)||(27513731-27513874)
chr4 (722-882)||(27460511-27460661)
chr4 (722-882)||(27469493-27469643)
chr4 (275-347)||(27482668-27482740)
chr4 (754-882)||(27502092-27502210)
chr4 (722-882)||(27476720-27476870)
chr4 (275-341)||(27462594-27462660)
chr4 (811-869)||(27444764-27444822)
chr4 (811-881)||(27466933-27467003)
chr4 (733-867)||(27557533-27557657)
chr4 (811-880)||(27567367-27567436)
chr4 (722-869)||(27498448-27498585)
chr4 (908-966)||(27474102-27474160)
chr4 (731-869)||(27431118-27431246)
chr4 (731-868)||(27501359-27501486)
chr4 (811-882)||(27500295-27500366)
chr4 (913-979)||(27469688-27469754)
chr4 (811-869)||(27554421-27554479)
chr4 (811-846)||(27495648-27495683)
[»] chr3 (6 HSPs)
chr3 (1-199)||(25518678-25518877)
chr3 (546-715)||(25520054-25520223)
chr3 (275-347)||(25519019-25519091)
chr3 (811-869)||(50904762-50904820)
chr3 (811-873)||(38028732-38028794)
chr3 (811-873)||(38040047-38040109)
[»] chr7 (1 HSPs)
chr7 (577-703)||(1699948-1700074)
[»] chr8 (1 HSPs)
chr8 (811-873)||(21604720-21604782)


Alignment Details
Target: chr5 (Bit Score: 273; Significance: 1e-152; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 449 - 729
Target Start/End: Original strand, 1758778 - 1759058
Alignment:
Q  449 gtaaaaatgctaaattttaagacaagaacatactgaagaatgaagatgacatattcaattatagtttcagattaatagtttttatgctgaacaattgatt 548  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1758778 gtaaaaatgctaaattttaagacaagaacatactgaagaatgaagatgacatattcaattatagtttcagattaatagtttttatgctgaacaattcatt 1758877  T
Q  549 tttgtttttgtaggatgaattggaaaatgattatgaagaagctgttagtgtggagtgggttgataagtgtttaagccttactttcaaatatccatgtggc 648  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1758878 tttgtttttgtaggatgaattggaaaatgattatgaagaagctgttagtgtggagtgggttgataagtgtttaagccttactttcaaatgtccatgtggc 1758977  T
Q  649 aagggatatgaggttctaatctgtgcaaacaattgttactacaagctgatctagaagaatcagtatgcttaattgattcct 729  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1758978 aagggatatgaggttctaatctgtgcaaacaattgttactacaagctgatctagaagaatcagtatgcttaattgattcct 1759058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 227; E-Value: 1e-124
Query Start/End: Original strand, 722 - 1005
Target Start/End: Original strand, 1759281 - 1759555
Alignment:
Q  722 tgattcctgtatcatatttaaaccaaacatcattccaagaattgttgagccaaccaagctgaggaacaatttgaatacaaccatccaattccaatgggtg 821  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||      |||||    
T  1759281 tgattcctgtatcatatttaaaccaaacatcattccaagaattgttgagccaagcaagctgaggaacaatttgaatacaaccatccaat------gggtg 1759374  T
Q  822 gtctcaccattctttgcagagaagacgttttcttagatatcacttctcacttgaattgaatcagcagctctctgaagatatcaaaagaccaatttttgta 921  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||   |||||||| |||||||||||||||||||||||    
T  1759375 gtctcaccattctttgcagagaagaagttttcttagatatcacttctcacttgaattgaatcagc---tctctgaaaatatcaaaagaccaatttttgta 1759471  T
Q  922 caactttagtttcttaccttcaaaagatttttacttttcttgttacttgaatgtaaaacttcatatttctataattcttctctg 1005  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1759472 gaactttagtttcttaccttcaaaagatttttacttttcttgttacttggatgtaaaacttcatatttctataattcttctctg 1759555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 1758342 - 1758540
Alignment:
Q  1 atctgaagttattgatccttctgaggttaaagaagcagttgctcgttatttgaactctgctgaaaaaaccacccctgaatctgattcaatggtatgtgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1758342 atctgaagttattgatccttctgaggttaaagaagcagttgctcgttatttgaactctgctgaaaaaaccacccctgaatctgattcaatggtatgtgtt 1758441  T
Q  101 gaaacttgtgtttcttgctaaaaaagtaatcnnnnnnngatttggaataatgggttttgtttgttatttgtagaggcttaaaaggatgaaggatcggtt 199  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1758442 gaaacttgtgtttcttgctaaaaaagtaatctttttttgatttggaataatgggttttgtttgttttttgtagaggcttaaaaggatgaaggatcggtt 1758540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 29568275 - 29568072
Alignment:
Q  1 atctgaagttattgatccttctgaggttaaagaagcagttgctcgttatttgaactctgctgaaaaaaccacccctgaatctgattcaatggtatgtgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29568275 atctgaagttattgatccttctgaggttaaagaagcagttgctcgttatttgaactctgctgaaaaaaccacccctgaatctgattcattggtatgtgtt 29568176  T
Q  101 gaaacttgtgtttcttgctaaaaaagtaatcnnnnnnnga-tttggaataatgggttttgtttg----ttatttgtagaggcttaaaaggatgaaggatc 195  Q
    ||||| |||||||||||||||||||||||||        | |||||||||||||||||||||||    || |||||||||||||||||||||||||||||    
T  29568175 gaaacatgtgtttcttgctaaaaaagtaatcttttttttattttggaataatgggttttgtttgttttttctttgtagaggcttaaaaggatgaaggatc 29568076  T
Q  196 ggtt 199  Q
    ||||    
T  29568075 ggtt 29568072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 140; E-Value: 8e-73
Query Start/End: Original strand, 546 - 729
Target Start/End: Complemental strand, 38867046 - 38866863
Alignment:
Q  546 atttttgtttttgtaggatgaattggaaaatgattatgaagaagctgttagtgtggagtgggttgataagtgtttaagccttactttcaaatatccatgt 645  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||    
T  38867046 atttatgtttttgtaggatgaattgggaaatgattatgaagaagctgttagtgtggagtgggttgataagagtttaagccttactttcaagtgtccatgt 38866947  T
Q  646 ggcaagggatatgaggttctaatctgtgcaaacaattgttactacaagctgatctagaagaatcagtatgcttaattgattcct 729  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||  ||| |||||||||||||    
T  38866946 ggcaagggatatgaggttctaatatgtgcaaacaattgttactacaagttggtctagaagaatcaaaatgtttaattgattcct 38866863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 135; E-Value: 8e-70
Query Start/End: Original strand, 513 - 715
Target Start/End: Original strand, 29250415 - 29250617
Alignment:
Q  513 tttcagattaatagtttttatgctgaacaattgatttttgtttttgtaggatgaattggaaaatgattatgaagaagctgttagtgtggagtgggttgat 612  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||    
T  29250415 tttcagattaattgtttttatgctgaacaattcatttatgtttttgtaggatgaattgggaaatgattataaagaagctgttagtgtggagtggattgat 29250514  T
Q  613 aagtgtttaagccttactttcaaatatccatgtggcaagggatatgaggttctaatctgtgcaaacaattgttactacaagctgatctagaagaatcagt 712  Q
    |||||||| |||||||||||||| | |||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||| || | || ||||||||||    
T  29250515 aagtgtttgagccttactttcaagtgtccatgcggcaagggatatgaggttctaatatgtgctaacaattgctactacaagttggtttacaagaatcagt 29250614  T
Q  713 atg 715  Q
    |||    
T  29250615 atg 29250617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 27918844 - 27919045
Alignment:
Q  1 atctgaagttattgatccttctgaggttaaagaagcagttgctcgttatttgaactctgctgaaaaaaccacccctgaatctgattcaatggtatgtgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27918844 atctgaagttattgatccttctgaggttaaagaagcagtttcttgttatttgaactctgctgaaaaaaccacccctgaatctgattcaatggtgtgtgtt 27918943  T
Q  101 gaaacttgtgtttcttgctaaaaaagtaatc---nnnnnnngatttggaataatgggttttgtttgttatttgtagaggcttaaaaggatgaaggatcgg 197  Q
    |||||||||||||||||||||||||||||||           ||||||||| |||| |||| |||| | || ||||||||||||||||||||||||||||    
T  27918944 gaaacttgtgtttcttgctaaaaaagtaatctatttttttttatttggaatcatggtttttctttgattttcgtagaggcttaaaaggatgaaggatcgg 27919043  T
Q  198 tt 199  Q
    ||    
T  27919044 tt 27919045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 546 - 710
Target Start/End: Original strand, 29426336 - 29426500
Alignment:
Q  546 atttttgtttttgtaggatgaattggaaaatgattatgaagaagctgttagtgtggagtgggttgataagtgtttaagccttactttcaaatatccatgt 645  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| | |||||||    
T  29426336 atttatgtttttgtaggatgaatcgggaaatgattatgaagaagctgttagtgtggagtgggttgataagagtttaaaccttactttcaagtgtccatgt 29426435  T
Q  646 ggcaagggatatgaggttctaatctgtgcaaacaattgttactacaagctgatctagaagaatca 710  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || | || ||||||||    
T  29426436 ggcaagggatatgaggttctaatctgtgcaaacaattgttactacaagttggtgtaaaagaatca 29426500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 29168449 - 29168652
Alignment:
Q  1 atctgaagttattgatccttctgaggttaaagaagcagttgctcgttatttgaactctgctgaaaaaaccacccctgaatctgattcaatggtatgtgtt 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  29168449 atctgaagttattgatccttctaaggttaaagaagcagttgctctttatttgaactcttctgaaagaaccacccctgaatctgattcaatggtatgtgtt 29168548  T
Q  101 gaaacttgtgtttcttgctaaaaaagtaatc-----nnnnnnngatttggaataatgggttttgtttgttatttgtagaggcttaaaaggatgaaggatc 195  Q
    |||| ||||||||||||||||||||||||||             |||||||||  ||| ||||  ||| |||||||||||||||||||||||||||||||    
T  29168549 gaaaattgtgtttcttgctaaaaaagtaatctattttttttttaatttggaatcttggtttttcattgatatttgtagaggcttaaaaggatgaaggatc 29168648  T
Q  196 ggtt 199  Q
    ||||    
T  29168649 ggtt 29168652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 541 - 727
Target Start/End: Original strand, 29169362 - 29169548
Alignment:
Q  541 aattgatttttgtttttgtaggatgaattggaaaatgattatgaagaagctgttagtgtggagtgggttgataagtgtttaagccttactttcaaatatc 640  Q
    |||| |||| || |||||||||||||||||| ||||||||||||||||||||| ||||| || ||| |||||||||||||||||||||||||||  |  |    
T  29169362 aattcatttatgattttgtaggatgaattgggaaatgattatgaagaagctgtcagtgtagaatggattgataagtgtttaagccttactttcaggtgcc 29169461  T
Q  641 catgtggcaagggatatgaggttctaatctgtgcaaacaattgttactacaagctgatctagaagaatcagtatgcttaattgattc 727  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||| || ||||||||||||| |||| |||||||||||    
T  29169462 catgtggcaagggatatgagattctaatatgtgcaaacaattgttactacaagttggtctagaagaatcattatgtttaattgattc 29169548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 387 - 517
Target Start/End: Original strand, 29250127 - 29250257
Alignment:
Q  387 atactcttcctttcaagaattttgtgggcaatatgttagagttagaggctgcatattgaagggtaaaaatgctaaattttaagacaagaacatactgaag 486  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||| |||||||||||||    
T  29250127 atactcttcctttcaagaattttgtgggcaatatgttagagttagaggctgcatattaaagggtaagattgctaaattttaagacaggaacatactgaag 29250226  T
Q  487 aatgaagatgacatattcaattatagtttca 517  Q
    |||||||||||||||||||||||||||||||    
T  29250227 aatgaagatgacatattcaattatagtttca 29250257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 541 - 710
Target Start/End: Complemental strand, 29566696 - 29566527
Alignment:
Q  541 aattgatttttgtttttgtaggatgaattggaaaatgattatgaagaagctgttagtgtggagtgggttgataagtgtttaagccttactttcaaatatc 640  Q
    |||| |||| |||||||| |||||||||||| ||||||||||||||||||||||||||| || ||| ||||| |||||||||||||||||||||| | ||    
T  29566696 aattcatttatgtttttgcaggatgaattgggaaatgattatgaagaagctgttagtgtagaatggattgatgagtgtttaagccttactttcaagtgtc 29566597  T
Q  641 catgtggcaagggatatgaggttctaatctgtgcaaacaattgttactacaagctgatctagaagaatca 710  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || | || ||||||||    
T  29566596 catgtggcaagggatatgaggttctaatctgtgcaaacaattgttactacaagttggtgtaaaagaatca 29566527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 275 - 380
Target Start/End: Original strand, 1758676 - 1758781
Alignment:
Q  275 ctcttttgttgctgaagatgaaaaagtcatatctcaggtgcatgtcttgaatcttcaactgtgattgtctttttcctttggtttttaatttacagaatct 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1758676 ctcttttgttgctgaagatgaaaaagtcatatctcaggtgcatgtcttgaatcttcaactgtgattgtctttttcctttggtttataatttacagaatct 1758775  T
Q  375 atgtaa 380  Q
    ||||||    
T  1758776 atgtaa 1758781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 29425493 - 29425699
Alignment:
Q  4 tgaagttattgatccttctgaggttaaagaagcagttgctcgttatttgaactctgctgaaaaaaccacccctgaatctgattcaatggtatgtgt---- 99  Q
    ||||||||||||||||| | ||||||||||||||||| || ||||||||||||||||||||||||| || ||||||||||||||| ||||||||||        
T  29425493 tgaagttattgatccttataaggttaaagaagcagtttcttgttatttgaactctgctgaaaaaactacacctgaatctgattcattggtatgtgttgga 29425592  T
Q  100 ------tgaaacttgtgtttcttgctaaaaaagtaatcnnnnnnngatttggaataatgggttttgtttg-ttatttgtagaggcttaaaaggatgaagg 192  Q
          ||||||||||||||||||||||||||||||||        |||||| || |||||||||| ||| || ||||||||||||||||||||||||||    
T  29425593 ttattatgaaacttgtgtttcttgctaaaaaagtaatcttttttttatttgggatcatgggttttggttgtttttttgtagaggcttaaaaggatgaagg 29425692  T
Q  193 atcggtt 199  Q
    |||||||    
T  29425693 atcggtt 29425699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 38157462 - 38157592
Alignment:
Q  1 atctgaagttattgatccttctgaggttaaagaagcagttgctcgttatttgaactctgctgaaaaaaccacccctgaatctgattcaatggtatgtgtt 100  Q
    |||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||  ||  ||||||||||||||||||||||||||    
T  38157462 atctgaagttattgatccttctgaggttaaagaaacagtttcttgttatttgaactctgctgaaaaaattacatctgaatctgattcaatggtatgtgtt 38157561  T
Q  101 gaaacttgtgtttcttgctaaaaaagtaatc 131  Q
    ||||||||| ||||||||||||| |||||||    
T  38157562 gaaacttgtttttcttgctaaaatagtaatc 38157592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 541 - 714
Target Start/End: Original strand, 32432111 - 32432284
Alignment:
Q  541 aattgatttttgtttttgtaggatgaattggaaaatgattatgaagaagctgttagtgtggagtgggttgataagtgtttaagccttactttcaaatatc 640  Q
    |||| |||||||| |||||||||||  |||| | | ||||||||||||||||||||||| |||||| |||| |||||||||||||||| ||| |  | ||    
T  32432111 aattcatttttgtgtttgtaggatggtttggcagaagattatgaagaagctgttagtgtagagtggattgaaaagtgtttaagccttatttttaggtgtc 32432210  T
Q  641 catgtggcaagggatatgaggttctaatctgtgcaaacaattgttactacaagctgatctagaagaatcagtat 714  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||| || | |||||||||||||||    
T  32432211 catgtggcaaggggtatgaggttctaatatgtgcaaacaattgttactacaagttggtgtagaagaatcagtat 32432284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 275 - 347
Target Start/End: Original strand, 29425844 - 29425916
Alignment:
Q  275 ctcttttgttgctgaagatgaaaaagtcatatctcaggtgcatgtcttgaatcttcaactgtgattgtctttt 347  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||    
T  29425844 ctcttttgttgctgatgatgaaaaagtcatatctcaggtacatgtcttgaatattcagctgtgattgtctttt 29425916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 275 - 347
Target Start/End: Original strand, 27919187 - 27919259
Alignment:
Q  275 ctcttttgttgctgaagatgaaaaagtcatatctcaggtgcatgtcttgaatcttcaactgtgattgtctttt 347  Q
    ||||||| || |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  27919187 ctcttttattactgaagatgaaaaagtcatatctcaggtacatgtcttgaatcttcgactgtgattgactttt 27919259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 275 - 347
Target Start/End: Original strand, 29168743 - 29168815
Alignment:
Q  275 ctcttttgttgctgaagatgaaaaagtcatatctcaggtgcatgtcttgaatcttcaactgtgattgtctttt 347  Q
    |||| ||||||||||||||||||| ||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  29168743 ctctcttgttgctgaagatgaaaatgtcatatctcaggtatatgtcttgaatcttcgactgtgattgtctttt 29168815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 275 - 347
Target Start/End: Complemental strand, 29567930 - 29567858
Alignment:
Q  275 ctcttttgttgctgaagatgaaaaagtcatatctcaggtgcatgtcttgaatcttcaactgtgattgtctttt 347  Q
    |||| ||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||| ||||||||    
T  29567930 ctctcttgttgctgaagatgaaaaagtcatatctcaggtatatgtcttgaatcttggactgtgactgtctttt 29567858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 344 - 411
Target Start/End: Complemental strand, 29567281 - 29567215
Alignment:
Q  344 tttttcctttggtttttaatttacagaatctatgtaagaataaatactcttcctttcaagaattttgt 411  Q
    |||||||||| ||||||| ||||| | ||||| |||||||||||||||||||||||||||||||||||    
T  29567281 tttttccttttgttttta-tttaccggatctaggtaagaataaatactcttcctttcaagaattttgt 29567215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 815 - 875
Target Start/End: Complemental strand, 1754265 - 1754206
Alignment:
Q  815 atgggtggtctcaccattctttgcagagaagacgttttcttagatatcacttctcacttga 875  Q
    |||||||||||||| |||| ||| |||||| || ||||||||||||||||||||| |||||    
T  1754265 atgggtggtctcactattccttgtagagaa-accttttcttagatatcacttctcgcttga 1754206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 186; Significance: 1e-100; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 514 - 719
Target Start/End: Original strand, 27463021 - 27463226
Alignment:
Q  514 ttcagattaatagtttttatgctgaacaattgatttttgtttttgtaggatgaattggaaaatgattatgaagaagctgttagtgtggagtgggttgata 613  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27463021 ttcagattaatagtttttatgctgaacaattgatttttgtttttgtaggatgaattgggaaatgattatgaagaagctgttagtgtggagtgggttgata 27463120  T
Q  614 agtgtttaagccttactttcaaatatccatgtggcaagggatatgaggttctaatctgtgcaaacaattgttactacaagctgatctagaagaatcagta 713  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  27463121 agtgtttaagccttactttcaagtgtccatgtggcaagggatatgaggttctaatctgtgcaaacaattgttactacaagttggtctagaagaatcagta 27463220  T
Q  714 tgctta 719  Q
    ||||||    
T  27463221 tgctta 27463226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 183; E-Value: 2e-98
Query Start/End: Original strand, 517 - 719
Target Start/End: Original strand, 27483396 - 27483598
Alignment:
Q  517 agattaatagtttttatgctgaacaattgatttttgtttttgtaggatgaattggaaaatgattatgaagaagctgttagtgtggagtgggttgataagt 616  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27483396 agattaatagtttttatgctgaacaattgatttttgtttttgtaggatgaattgggaaatgattatgaagaagctgttagtgtggagtgggttgataagt 27483495  T
Q  617 gtttaagccttactttcaaatatccatgtggcaagggatatgaggttctaatctgtgcaaacaattgttactacaagctgatctagaagaatcagtatgc 716  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  27483496 gtttaagccttactttcaagtgtccatgtggcaagggatatgaggttctaatctgtgcaaacaattgttactacaagttggtctagaagaatcagtatgc 27483595  T
Q  717 tta 719  Q
    |||    
T  27483596 tta 27483598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 511 - 727
Target Start/End: Original strand, 18987740 - 18987956
Alignment:
Q  511 agtttcagattaatagtttttatgctgaacaattgatttttgtttttgtaggatgaattggaaaatgattatgaagaagctgttagtgtggagtgggttg 610  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||    
T  18987740 agtttcagattaatagtttttatgctgaacaattgttttttgtttttgtaggatcaattgggaaatgattatgaagaagctgttagtgtggagtggattg 18987839  T
Q  611 ataagtgtttaagccttactttcaaatatccatgtggcaagggatatgaggttctaatctgtgcaaacaattgttactacaagctgatctagaagaatca 710  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  18987840 ataagtgtttaagccttactttcaagtgtccatgtggcaagggatatgaggttctaatctgtgcaaacaattgttactacaagttggtctagaagaatca 18987939  T
Q  711 gtatgcttaattgattc 727  Q
    ||||||||||| |||||    
T  18987940 gtatgcttaatagattc 18987956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 517 - 719
Target Start/End: Original strand, 27471623 - 27471825
Alignment:
Q  517 agattaatagtttttatgctgaacaattgatttttgtttttgtaggatgaattggaaaatgattatgaagaagctgttagtgtggagtgggttgataagt 616  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27471623 agattaatagtttttatgctgaacaattgatttttatttttgtaggatgaattgggaaatgattatgaagaagctgttagtgtggagtgggttgataagt 27471722  T
Q  617 gtttaagccttactttcaaatatccatgtggcaagggatatgaggttctaatctgtgcaaacaattgttactacaagctgatctagaagaatcagtatgc 716  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  27471723 gtttaagccttactttcaagtgtccatgtggcaagggatatgaggttctaatctgtgcaaacaattgttactacaagttggtctagaagaatcagtatgc 27471822  T
Q  717 tta 719  Q
    |||    
T  27471823 tta 27471825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 513 - 719
Target Start/End: Complemental strand, 27520004 - 27519798
Alignment:
Q  513 tttcagattaatagtttttatgctgaacaattgatttttgtttttgtaggatgaattggaaaatgattatgaagaagctgttagtgtggagtgggttgat 612  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27520004 tttcagattaatagtttttatgctgaacagttcatttttgtttttgtaggatgaattgggaaatgattatgaagaagctgttagtgtggagtgggttgat 27519905  T
Q  613 aagtgtttaagccttactttcaaatatccatgtggcaagggatatgaggttctaatctgtgcaaacaattgttactacaagctgatctagaagaatcagt 712  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  27519904 aagtgtttaagccttactttcaagtgtccatgtggcaagggatatgaggttctaatctgtgcaaacaattgttactacaagttggtctagaagaatcagt 27519805  T
Q  713 atgctta 719  Q
    |||||||    
T  27519804 atgctta 27519798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 154; E-Value: 4e-81
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 27462194 - 27462392
Alignment:
Q  1 atctgaagttattgatccttctgaggttaaagaagcagttgctcgttatttgaactctgctgaaaaaaccacccctgaatctgattcaatggtatgtgtt 100  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27462194 atctgaagttattgatcctactgaggttaaagaagcagtagctcgttatttgaactgtgctgaaaaaaccacccctgaatctgattcaatggtatgtgtt 27462293  T
Q  101 gaaacttgtgtttcttgctaaaaaagtaatcnnnnnnngatttggaataatgggttttgtttgttatttgtagaggcttaaaaggatgaaggatcggtt 199  Q
    ||||||||||||||||||||||||||||| |       ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27462294 gaaacttgtgtttcttgctaaaaaagtaaactttttttgatttggaatattgggttttgtttgttttttgtagaggcttaaaaggatgaaggatcggtt 27462392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 150; E-Value: 9e-79
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 27521241 - 27521043
Alignment:
Q  1 atctgaagttattgatccttctgaggttaaagaagcagttgctcgttatttgaactctgctgaaaaaaccacccctgaatctgattcaatggtatgtgtt 100  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27521241 atctgaagttattgatccttttgaggttaaagaagcagtagctcgttatttgaactctgctaaaaaaaccacccctgaatctgattcaatggtatgtgtt 27521142  T
Q  101 gaaacttgtgtttcttgctaaaaaagtaatcnnnnnnngatttggaataatgggttttgtttgttatttgtagaggcttaaaaggatgaaggatcggtt 199  Q
    ||||||||||||||||| |||||||||| ||       ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  27521141 gaaacttgtgtttcttgataaaaaagtactctttttttgatttggaataatgggttttgtttgtttttcgtagaggcttaaaaggatgaaggatcggtt 27521043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 147; E-Value: 6e-77
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 27482333 - 27482532
Alignment:
Q  1 atctgaagttattgatccttctgaggttaaagaagcagttgctcgttatttgaactctgctgaaaaaaccacccctgaatctgattcaatggtatgtgtt 100  Q
    |||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27482333 atctgaagttatcgatcctactgaggttaaagaagcagtagctcgttatttgaactgtgctgaaaaaaccacccctgaatctgattcaatggtatgtgtt 27482432  T
Q  101 gaaacttgtgtttcttgctaaaaaagtaatc-nnnnnnngatttggaataatgggttttgtttgttatttgtagaggcttaaaaggatgaaggatcggtt 199  Q
    |||||||||||||||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27482433 gaaacttgtgtttcttgctaaaaaagtaatcttttttttaatttggaataatgggttttgtttgttttttgtagaggcttaaaaggatgaaggatcggtt 27482532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 344 - 517
Target Start/End: Complemental strand, 27520553 - 27520380
Alignment:
Q  344 tttttcctttggtttttaatttacagaatctatgtaagaataaatactcttcctttcaagaattttgtgggcaatatgttagagttagaggctgcatatt 443  Q
    |||||||||||||||||||||||| ||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |  ||||     
T  27520553 tttttcctttggtttttaatttaccgaatctaggtaagaataaacactcttcttttcaagaattttgtgggcaatatgttagagttagaggttttatatc 27520454  T
Q  444 gaagggtaaaaatgctaaattttaagacaagaacatactgaagaatgaagatgacatattcaattatagtttca 517  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27520453 gaagggtaaaaatgctaaattttaagacaggaacatactgaagaatgaagatgacatattcaattatagtttca 27520380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 344 - 517
Target Start/End: Original strand, 18987200 - 18987369
Alignment:
Q  344 tttttcctttggtttttaatttacagaatctatgtaagaataaatactcttcctttcaagaattttgtgggcaatatgttagagttagaggctgcatatt 443  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  18987200 tttttcctttggtttttaatttaccgaatctaggtaagaataaatactcttcctttcaagaattttgtgggaagtatgttagagttagaggctgcatatt 18987299  T
Q  444 gaagggtaaaaatgctaaattttaagacaagaacatactgaagaatgaagatgacatattcaattatagtttca 517  Q
    ||||||||||||||||||||||||||||||||||||||||||    |||||||| |||||||||||||||||||    
T  18987300 gaagggtaaaaatgctaaattttaagacaagaacatactgaa----gaagatgatatattcaattatagtttca 18987369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 130; E-Value: 8e-67
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 18986294 - 18986480
Alignment:
Q  1 atctgaagttattgatccttctgaggttaaagaagcagttgctcgttatttgaactctgctgaaaaaaccacccctgaatctgattcaatggtatgtgtt 100  Q
    |||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18986294 atctgaagttattgatccgtctgatgttaaagaagcagttgatcgttatttgaactctgctgaaaaaaccacccttgaatctgattcaatggtatgtgtt 18986393  T
Q  101 gaaacttgtgtttcttgctaaaaaagtaatc-nnnnnnngatttggaataatgggttttgtttgttatttgtagaggcttaaaagga 186  Q
    |||||||||||||||||||||||||||||||        || |||||||||||||||||||||||| |||||| |||||||||||||    
T  18986394 gaaacttgtgtttcttgctaaaaaagtaatcttttttttgacttggaataatgggttttgtttgttttttgtataggcttaaaagga 18986480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 722 - 882
Target Start/End: Complemental strand, 27505809 - 27505659
Alignment:
Q  722 tgattcctgtatcatatttaaaccaaacatcattccaagaattgttgagccaaccaagctgaggaacaatttgaatacaaccatccaattccaatgggtg 821  Q
    |||||||||||||||| || |||||||| |||||||||||||||||||    |||||||||||||||||||||||||  ||||||||||      |||||    
T  27505809 tgattcctgtatcatacttgaaccaaacctcattccaagaattgttga----accaagctgaggaacaatttgaatatgaccatccaat------gggtg 27505720  T
Q  822 gtctcaccattctttgcagagaagacgttttcttagatatcacttctcacttgaattgaat 882  Q
    ||||||| |||| ||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  27505719 gtctcactattccttgcagagaagagattttcttagatatcatttctcacttgaattgaat 27505659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 722 - 882
Target Start/End: Original strand, 27479934 - 27480084
Alignment:
Q  722 tgattcctgtatcatatttaaaccaaacatcattccaagaattgttgagccaaccaagctgaggaacaatttgaatacaaccatccaattccaatgggtg 821  Q
    |||||||||||||||| || |||||||||||||||||| | |||||||    |||||||||||||||||||||||||  | ||||||      |||||||    
T  27479934 tgattcctgtatcatacttgaaccaaacatcattccaaaagttgttga----accaagctgaggaacaatttgaatatgatcatcca------atgggtg 27480023  T
Q  822 gtctcaccattctttgcagagaagacgttttcttagatatcacttctcacttgaattgaat 882  Q
    |||||||||||| ||||||||||||| ||||||||||||| | ||||||||||||||||||    
T  27480024 gtctcaccattccttgcagagaagacattttcttagatattaattctcacttgaattgaat 27480084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 722 - 882
Target Start/End: Complemental strand, 27523510 - 27523360
Alignment:
Q  722 tgattcctgtatcatatttaaaccaaacatcattccaagaattgttgagccaaccaagctgaggaacaatttgaatacaaccatccaattccaatgggtg 821  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||| ||    || |||||||||||||||||  ||||||||||      |||||    
T  27523510 tgattcctgtatcatatttgaaccaaacttcattccaagaattgttgagcgaa----gccgaggaacaatttgaatatgaccatccaat------gggtg 27523421  T
Q  822 gtctcaccattctttgcagagaagacgttttcttagatatcacttctcacttgaattgaat 882  Q
    |||| || |||| ||||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  27523420 gtctaactattccttgcaaagaagacattttcttagatattacttctcacttgaattgaat 27523360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 722 - 882
Target Start/End: Complemental strand, 27526219 - 27526069
Alignment:
Q  722 tgattcctgtatcatatttaaaccaaacatcattccaagaattgttgagccaaccaagctgaggaacaatttgaatacaaccatccaattccaatgggtg 821  Q
    |||||||||||||||| || |||||||| ||||||||||||||||||||||||    ||||||||||||||||||||  | |||||||       |||||    
T  27526219 tgattcctgtatcatacttgaaccaaacctcattccaagaattgttgagccaa----gctgaggaacaatttgaatatgatcatccaac------gggtg 27526130  T
Q  822 gtctcaccattctttgcagagaagacgttttcttagatatcacttctcacttgaattgaat 882  Q
    ||||||| |||| |||||||||||||||||||||||| ||||||||||  |||||||||||    
T  27526129 gtctcactattccttgcagagaagacgttttcttagagatcacttctcgtttgaattgaat 27526069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 722 - 881
Target Start/End: Complemental strand, 27516716 - 27516567
Alignment:
Q  722 tgattcctgtatcatatttaaaccaaacatcattccaagaattgttgagccaaccaagctgaggaacaatttgaatacaaccatccaattccaatgggtg 821  Q
    |||| ||| |||||||||| || |||| ||||||||||||||||||||    |||||||||||||||||||||||||  ||||||||||      ||| |    
T  27516716 tgatccctatatcatatttgaagcaaaaatcattccaagaattgttga----accaagctgaggaacaatttgaatatgaccatccaat------ggggg 27516627  T
Q  822 gtctcaccattctttgcagagaagacgttttcttagatatcacttctcacttgaattgaa 881  Q
    ||||||| |||| ||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  27516626 gtctcactattccttgcaaagaagaagttttcttagatatcacttctaacttgaattgaa 27516567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 275 - 347
Target Start/End: Original strand, 18986615 - 18986687
Alignment:
Q  275 ctcttttgttgctgaagatgaaaaagtcatatctcaggtgcatgtcttgaatcttcaactgtgattgtctttt 347  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18986615 ctcttttgttgctaaagatgaaaaagtcatatctcaggtacatgtcttgaatcttcaactgtgattgtctttt 18986687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 275 - 347
Target Start/End: Complemental strand, 27520901 - 27520829
Alignment:
Q  275 ctcttttgttgctgaagatgaaaaagtcatatctcaggtgcatgtcttgaatcttcaactgtgattgtctttt 347  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  27520901 ctcttttgttgctgaagatgaaaaagtcatatcgcaggtacatgtcttgaatcttcaactgtgattgtctttt 27520829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 344 - 423
Target Start/End: Original strand, 27471494 - 27471573
Alignment:
Q  344 tttttcctttggtttttaatttacagaatctatgtaagaataaatactcttcctttcaagaattttgtgggcaatatgtt 423  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  27471494 tttttcgtttggtttttaatttactgaatctaggtaagaataaatactcttcctttcatgaattttgtgggcaatatgtt 27471573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 722 - 881
Target Start/End: Original strand, 27473925 - 27474074
Alignment:
Q  722 tgattcctgtatcatatttaaaccaaacatcattccaagaattgttgagccaaccaagctgaggaacaatttgaatacaaccatccaattccaatgggtg 821  Q
    |||| ||| |||||||||| || |||| |||||||||||||||| ||||||||   || ||||||||||||||||||  | ||||||      |||||||    
T  27473925 tgatccctatatcatatttgaagcaaaaatcattccaagaattgctgagccaa---ag-tgaggaacaatttgaatatgatcatcca------atgggtg 27474014  T
Q  822 gtctcaccattctttgcagagaagacgttttcttagatatcacttctcacttgaattgaa 881  Q
    |||||||||||| |||| ||||||||||||||||||| |||||||||| |||||||||||    
T  27474015 gtctcaccattccttgcggagaagacgttttcttagacatcacttctcgcttgaattgaa 27474074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 722 - 904
Target Start/End: Original strand, 27487016 - 27487188
Alignment:
Q  722 tgattcctgtatcatatttaaaccaaacatcattccaagaattgttgagccaaccaagctgaggaacaatttgaatacaaccatccaattccaatgggtg 821  Q
    |||| ||| ||||||| ||||||||| |||| || |||||||||||||    |||||||||| ||||||||||||||  | ||||||      |||||||    
T  27487016 tgatccctttatcatacttaaaccaaccatcgtttcaagaattgttga----accaagctgaagaacaatttgaatatgatcatcca------atgggtg 27487105  T
Q  822 gtctcaccattctttgcagagaagacgttttcttagatatcacttctcacttgaattgaatcagcagctctctgaagatatca 904  Q
    |||| || |||| ||||| ||||||| ||||||||||||| |||||||||||||||||||| |  || ||| |||||||||||    
T  27487106 gtcttactattccttgcaaagaagacattttcttagatattacttctcacttgaattgaattattagttctttgaagatatca 27487188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 731 - 884
Target Start/End: Complemental strand, 27513874 - 27513731
Alignment:
Q  731 tatcatatttaaaccaaacatcattccaagaattgttgagccaaccaagctgaggaacaatttgaatacaaccatccaattccaatgggtggtctcacca 830  Q
    ||||||| || |||||||| || ||||||||||||||||    |||||||||| ||||||| ||||||  | ||||||||      |||||||||||| |    
T  27513874 tatcatacttgaaccaaacctcgttccaagaattgttga----accaagctgaagaacaatatgaatatgatcatccaat------gggtggtctcacta 27513785  T
Q  831 ttctttgcagagaagacgttttcttagatatcacttctcacttgaattgaatca 884  Q
    ||| |||||||||||| || ||||||||||||||||||| ||||||||||||||    
T  27513784 ttccttgcagagaagaagtattcttagatatcacttctcgcttgaattgaatca 27513731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 722 - 882
Target Start/End: Original strand, 27460511 - 27460661
Alignment:
Q  722 tgattcctgtatcatatttaaaccaaacatcattccaagaattgttgagccaaccaagctgaggaacaatttgaatacaaccatccaattccaatgggtg 821  Q
    |||| ||| |||||||||| || |||| |||||||||||||||| ||||||||   || ||||||||||||||||||  | ||||||      |||||||    
T  27460511 tgatccctatatcatatttgaagcaaaaatcattccaagaattgctgagccaa---ag-tgaggaacaatttgaatatgatcatcca------atgggtg 27460600  T
Q  822 gtctcaccattctttgcagagaagacgttttcttagatatcacttctcacttgaattgaat 882  Q
    |||||||||||| ||||||||||||| ||||||| |||||||| |||||||| | ||||||    
T  27460601 gtctcaccattccttgcagagaagacattttcttggatatcacctctcacttaatttgaat 27460661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 722 - 882
Target Start/End: Original strand, 27469493 - 27469643
Alignment:
Q  722 tgattcctgtatcatatttaaaccaaacatcattccaagaattgttgagccaaccaagctgaggaacaatttgaatacaaccatccaattccaatgggtg 821  Q
    |||| ||| |||||||||| || ||||||||||| |||||| |||||||||||    ||||| ||||||||||||||  | ||||||      |||||||    
T  27469493 tgatccctatatcatatttgaagcaaacatcattacaagaactgttgagccaa----gctgaagaacaatttgaatatgaacatcca------atgggtg 27469582  T
Q  822 gtctcaccattctttgcagagaagacgttttcttagatatcacttctcacttgaattgaat 882  Q
    |||| || |||| ||||||||||||  |||||||||||||||| |||||||| ||||||||    
T  27469583 gtctaactattccttgcagagaagaaattttcttagatatcacctctcacttcaattgaat 27469643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 275 - 347
Target Start/End: Original strand, 27482668 - 27482740
Alignment:
Q  275 ctcttttgttgctgaagatgaaaaagtcatatctcaggtgcatgtcttgaatcttcaactgtgattgtctttt 347  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||| |||||||| ||||    
T  27482668 ctcttttgttgctgaagatgaaaaagtcatatctcaggtacatatcttgaatctttaacggtgattgtgtttt 27482740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 754 - 882
Target Start/End: Complemental strand, 27502210 - 27502092
Alignment:
Q  754 ttccaagaattgttgagccaaccaagctgaggaacaatttgaatacaaccatccaattccaatgggtggtctcaccattctttgcagagaagacgttttc 853  Q
    ||||||||||||||||    |||||||||||||||||||||||||  | ||||||||      ||||||||| || |||| ||||||||||||| |||||    
T  27502210 ttccaagaattgttga----accaagctgaggaacaatttgaatatgatcatccaat------gggtggtctaactattccttgcagagaagacattttc 27502121  T
Q  854 ttagatatcacttctcacttgaattgaat 882  Q
    ||||||||||| |||||||| ||||||||    
T  27502120 ttagatatcacctctcacttaaattgaat 27502092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 722 - 882
Target Start/End: Original strand, 27476720 - 27476870
Alignment:
Q  722 tgattcctgtatcatatttaaaccaaacatcattccaagaattgttgagccaaccaagctgaggaacaatttgaatacaaccatccaattccaatgggtg 821  Q
    |||||||||||||||| || |||||||| |||||||||||| || ||||||||   || ||||||||||||||||||  | ||||||      |||||||    
T  27476720 tgattcctgtatcatacttgaaccaaacctcattccaagaactgctgagccaa---ag-tgaggaacaatttgaatatgatcatcca------atgggtg 27476809  T
Q  822 gtctcaccattctttgcagagaagacgttttcttagatatcacttctcacttgaattgaat 882  Q
    |||| || |||| ||||||||||||| ||||||| ||||| || |||||||| ||||||||    
T  27476810 gtctaactattccttgcagagaagacattttcttggatattacctctcacttaaattgaat 27476870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 27462594 - 27462660
Alignment:
Q  275 ctcttttgttgctgaagatgaaaaagtcatatctcaggtgcatgtcttgaatcttcaactgtgattg 341  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  27462594 ctcttttgtttctgaagatgaaaaagtcatatctcaggtacatatcttgaatattcaactgtgattg 27462660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 811 - 869
Target Start/End: Complemental strand, 27444822 - 27444764
Alignment:
Q  811 tccaatgggtggtctcaccattctttgcagagaagacgttttcttagatatcacttctc 869  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||    
T  27444822 tccaatgggtggtctcacaattccttgcagagaagacgttttcttagatattacttctc 27444764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 811 - 881
Target Start/End: Original strand, 27466933 - 27467003
Alignment:
Q  811 tccaatgggtggtctcaccattctttgcagagaagacgttttcttagatatcacttctcacttgaattgaa 881  Q
    |||||||||||||||||| |||| |||||||||||| ||||||||||| |||||||||  |||||||||||    
T  27466933 tccaatgggtggtctcactattccttgcagagaagaagttttcttagacatcacttctagcttgaattgaa 27467003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 733 - 867
Target Start/End: Original strand, 27557533 - 27557657
Alignment:
Q  733 tcatatttaaaccaaacatcattccaagaattgttgagccaaccaagctgaggaacaatttgaatacaaccatccaattccaatgggtggtctcaccatt 832  Q
    ||||| ||||||||| ||||||| ||||||||| |||    | |||||||||||||||||||||||    ||||||      |||||||||||||| |||    
T  27557533 tcatacttaaaccaaccatcatttcaagaattgctga----atcaagctgaggaacaatttgaatatgttcatcca------atgggtggtctcactatt 27557622  T
Q  833 ctttgcagagaagacgttttcttagatatcacttc 867  Q
    |  ||||||||||| ||||||||||||||||||||    
T  27557623 ccatgcagagaagatgttttcttagatatcacttc 27557657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 811 - 880
Target Start/End: Original strand, 27567367 - 27567436
Alignment:
Q  811 tccaatgggtggtctcaccattctttgcagagaagacgttttcttagatatcacttctcacttgaattga 880  Q
    |||||||||||||||||| |||| |||||| ||||| | |||||||||  ||||||||||||||||||||    
T  27567367 tccaatgggtggtctcacaattccttgcagcgaagatgctttcttagaactcacttctcacttgaattga 27567436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 722 - 869
Target Start/End: Original strand, 27498448 - 27498585
Alignment:
Q  722 tgattcctgtatcatatttaaaccaaacatcattccaagaattgttgagccaaccaagctgaggaacaatttgaatacaaccatccaattccaatgggtg 821  Q
    |||| ||| ||||||| || |||||| |||| |||||||| |||||||    ||||||| ||||||||||| |||||  | ||||||      |||||||    
T  27498448 tgatccctatatcatacttgaaccaaccatcgttccaagacttgttga----accaagccgaggaacaattcgaatatgatcatcca------atgggtg 27498537  T
Q  822 gtctcaccattctttgcagagaagacgttttcttagatatcacttctc 869  Q
    ||||||| |||| |||| |||||||| | |||||||||||||||||||    
T  27498538 gtctcactattccttgcggagaagacatgttcttagatatcacttctc 27498585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 908 - 966
Target Start/End: Original strand, 27474102 - 27474160
Alignment:
Q  908 gaccaatttttgtacaactttagtttcttaccttcaaaagatttttacttttcttgtta 966  Q
    ||||||||||||||  |||||||||||| |||||||||||||||| |||||| ||||||    
T  27474102 gaccaatttttgtagcactttagtttctaaccttcaaaagattttcacttttgttgtta 27474160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 731 - 869
Target Start/End: Complemental strand, 27431246 - 27431118
Alignment:
Q  731 tatcatatttaaaccaaacatcattccaagaattgttgagccaaccaagctgaggaacaatttgaatacaaccatccaattccaatgggtggtctcacca 830  Q
    ||||||| || |||||| | ||||| |||||||||||||    | ||||| ||||||||||||| |||  |||||||||  ||    ||||||||||| |    
T  27431246 tatcatacttgaaccaaccgtcatttcaagaattgttga----atcaagccgaggaacaatttggatatgaccatccaa--cc----ggtggtctcacaa 27431157  T
Q  831 ttctttgcagagaagacgttttcttagatatcacttctc 869  Q
    ||| |||||||||||||||||||||| |||| |||||||    
T  27431156 ttccttgcagagaagacgttttcttaaatattacttctc 27431118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 731 - 868
Target Start/End: Original strand, 27501359 - 27501486
Alignment:
Q  731 tatcatatttaaaccaaacatcattccaagaattgttgagccaaccaagctgaggaacaatttgaatacaaccatccaattccaatgggtggtctcacca 830  Q
    ||||||| ||||||||| |||  || ||||| |||||||    ||||||| |||||||||||||||||| | |||||||       |||||||||||| |    
T  27501359 tatcatacttaaaccaaccattgtttcaagacttgttga----accaagccgaggaacaatttgaatacgatcatccaac------gggtggtctcacta 27501448  T
Q  831 ttctttgcagagaagacgttttcttagatatcacttct 868  Q
    ||| ||| ||||||||| | ||||||||||||||||||    
T  27501449 ttccttgtagagaagacatgttcttagatatcacttct 27501486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 811 - 882
Target Start/End: Complemental strand, 27500366 - 27500295
Alignment:
Q  811 tccaatgggtggtctcaccattctttgcagagaagacgttttcttagatatcacttctcacttgaattgaat 882  Q
    ||||||||||||  |||| |||| ||||||||||||| ||||||||||  ||||||||  ||||||||||||    
T  27500366 tccaatgggtggcatcactattccttgcagagaagaccttttcttagaattcacttcttgcttgaattgaat 27500295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 913 - 979
Target Start/End: Original strand, 27469688 - 27469754
Alignment:
Q  913 atttttgtacaactttagtttcttaccttcaaaagatttttacttttcttgttacttgaatgtaaaa 979  Q
    |||||||||  ||||||||||| ||||||||||||||||| |||||| |||| | ||| ||||||||    
T  27469688 atttttgtagcactttagtttcataccttcaaaagattttcacttttgttgtaatttggatgtaaaa 27469754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 811 - 869
Target Start/End: Original strand, 27554421 - 27554479
Alignment:
Q  811 tccaatgggtggtctcaccattctttgcagagaagacgttttcttagatatcacttctc 869  Q
    ||||| |||| ||||||| |||| ||| ||||||||||||||||||||||| |||||||    
T  27554421 tccaacgggtagtctcacaattccttgtagagaagacgttttcttagatattacttctc 27554479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 811 - 846
Target Start/End: Original strand, 27495648 - 27495683
Alignment:
Q  811 tccaatgggtggtctcaccattctttgcagagaaga 846  Q
    ||||||||||||||||||||||| ||||||||||||    
T  27495648 tccaatgggtggtctcaccattccttgcagagaaga 27495683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 147; Significance: 6e-77; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 6e-77
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 25518678 - 25518877
Alignment:
Q  1 atctgaagttattgatccttctgaggttaaagaagcagttgctcgttatttgaactctgctgaaaaaaccacccctgaatctgattcaatggtatgtgtt 100  Q
    ||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25518678 atctgaagttattgatcctttggaggttaaagaagcagttgcttgttatttgaactctgctgaaaaaaccacccctgaatctgattcaatggtatgtgtt 25518777  T
Q  101 gaaacttgtgtttcttgctaaaaaagtaatc-nnnnnnngatttggaataatgggttttgtttgttatttgtagaggcttaaaaggatgaaggatcggtt 199  Q
    |||||||||||||||||||||||||||||||         ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25518778 gaaacttgtgtttcttgctaaaaaagtaatctttttttatatttggaatcatgggttttgtttgttttttgtagaggcttaaaaggatgaaggatcggtt 25518877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 8e-67
Query Start/End: Original strand, 546 - 715
Target Start/End: Original strand, 25520054 - 25520223
Alignment:
Q  546 atttttgtttttgtaggatgaattggaaaatgattatgaagaagctgttagtgtggagtgggttgataagtgtttaagccttactttcaaatatccatgt 645  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||    
T  25520054 atttatgtttttgtaggatgaattgggaaatgattatgaagaagctgttagtgtagagtgggttgataagtgtttaagccttactttcaagtgtccatgt 25520153  T
Q  646 ggcaagggatatgaggttctaatctgtgcaaacaattgttactacaagctgatctagaagaatcagtatg 715  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||| ||||    
T  25520154 agcaagggatatgaggttctaatctgtgcaaacaattgttactacaagttggtgtagaagaatcactatg 25520223  T

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Target: chr3; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 275 - 347
Target Start/End: Original strand, 25519019 - 25519091
Alignment:
Q  275 ctcttttgttgctgaagatgaaaaagtcatatctcaggtgcatgtcttgaatcttcaactgtgattgtctttt 347  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||||    
T  25519019 ctcttttgttgctgaagatgaaaaagtcatatctcaggtatatgtcttgaatcttggactgtgattgtctttt 25519091  T

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Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 811 - 869
Target Start/End: Complemental strand, 50904820 - 50904762
Alignment:
Q  811 tccaatgggtggtctcaccattctttgcagagaagacgttttcttagatatcacttctc 869  Q
    |||||||||||| |||||||||| |||||||||||| ||||| ||  ||||||||||||    
T  50904820 tccaatgggtggcctcaccattccttgcagagaagaggtttttttgcatatcacttctc 50904762  T

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Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 811 - 873
Target Start/End: Complemental strand, 38028794 - 38028732
Alignment:
Q  811 tccaatgggtggtctcaccattctttgcagagaagacgttttcttagatatcacttctcactt 873  Q
    ||||||||| || ||||| |||| ||||| |||||||||||||||  |||| |||||||||||    
T  38028794 tccaatgggcggcctcacaattccttgcacagaagacgttttcttgcatattacttctcactt 38028732  T

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Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 811 - 873
Target Start/End: Complemental strand, 38040109 - 38040047
Alignment:
Q  811 tccaatgggtggtctcaccattctttgcagagaagacgttttcttagatatcacttctcactt 873  Q
    ||||||||| || ||||| |||| ||||| |||||||||||||||  |||| |||||||||||    
T  38040109 tccaatgggcggcctcacaattccttgcacagaagacgttttcttgcatattacttctcactt 38040047  T

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Target: chr7 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 577 - 703
Target Start/End: Complemental strand, 1700074 - 1699948
Alignment:
Q  577 gattatgaagaagctgttagtgtggagtgggttgataagtgtttaagccttactttcaaatatccatgtggcaagggatatgaggttctaatctgtgcaa 676  Q
    |||| |||||||||||| ||||| ||||||| ||| || ||  |||||||||||||||| | ||||||||||||||| ||||||||||| || |  || |    
T  1700074 gattttgaagaagctgtgagtgtagagtgggctgaaaaatgcataagccttactttcaagtgtccatgtggcaagggctatgaggttcttatatcagcca 1699975  T
Q  677 acaattgttactacaagctgatctaga 703  Q
    |||||||||| |||||| || ||||||    
T  1699974 acaattgttattacaagttggtctaga 1699948  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 811 - 873
Target Start/End: Complemental strand, 21604782 - 21604720
Alignment:
Q  811 tccaatgggtggtctcaccattctttgcagagaagacgttttcttagatatcacttctcactt 873  Q
    ||||||||| || ||||| |||| ||||| |||||||||||||||  |||| |||||||||||    
T  21604782 tccaatgggcggcctcacaattccttgcacagaagacgttttcttgcatattacttctcactt 21604720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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