View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9261_low_6 (Length: 783)
Name: NF9261_low_6
Description: NF9261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9261_low_6 |
 | |
|
| [»] scaffold0070 (1 HSPs) |
| | |
|
| [»] scaffold0830 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 613; Significance: 0; HSPs: 31)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 613; E-Value: 0
Query Start/End: Original strand, 50 - 765
Target Start/End: Original strand, 25474645 - 25475361
Alignment:
| Q |
50 |
atgaaaacatcacacataatttacatgcttgtgatatgatccttatgcactagttgattcttttaacagctaaaggaaatatattaagaaaatggtgtac |
149 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
25474645 |
atgaaaacatcacacatgatttacatgcttgtgatatgatccttatgcactagttgattcttttaacagttaaaggaaatatattaagaaaatggtgtac |
25474744 |
T |
|
| Q |
150 |
ttcaatctcataaatccaaaaagcaagacataaatccaaagt-catattgaaaacatcccacacaaacattacaaaaagaaaaagataaccacttaaaaa |
248 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25474745 |
ttcaatctcatatatccaaaaagcaagacataaatccaaaaagcatattgaaaacatcccacacaaacattacaaaaagaaaaagataaccacttaaaaa |
25474844 |
T |
|
| Q |
249 |
tggattccaacacacgaaaactccaattgtacaaatgaaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataa |
348 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25474845 |
tggattcctacacacgaaaactccaattgtacaaatgaaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataa |
25474944 |
T |
|
| Q |
349 |
catctgccatattaattcttgctttaggtaaatcttcacaacaactgagggctaaaccaaaaatagctggtatgtaagtcaatatgtcatcaatttggtc |
448 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| || |
|
|
| T |
25474945 |
catctgccatattaattcttgctttaggtaaatcttcacaacaactgagggctaaaccaaaaatagatgttatgttagtcaatatgtcatcaatttgttc |
25475044 |
T |
|
| Q |
449 |
cccagttatttggactaaatttgaatccatgacatcaataattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacata |
548 |
Q |
| |
|
|||| || ||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
25475045 |
cccatttttttggactaaatttgaatccatgacttctataattgaattaggcaatgatccattgatccatgtcttcaattttagttctgcaacaaacata |
25475144 |
T |
|
| Q |
549 |
tcatctgttggcttttttcttgtaaagatttccattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactctg |
648 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25475145 |
tcatctgttggcttttttcttgttaagatttccattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactctg |
25475244 |
T |
|
| Q |
649 |
catttaaatactagttatcaaaattggtcgtccatttttcctaagttaaagttttaatccctcatttctaatatcgggttttttgtcccctatttcacaa |
748 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||| |
|
|
| T |
25475245 |
catttaaatactagttatcaaaagtggtagtccatgtttcctaagttaaagttgtaatccctcatttctaaaatcggattttttatcccctatttcacaa |
25475344 |
T |
|
| Q |
749 |
atttgaagatttcccat |
765 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
25475345 |
atttgaagatttcccat |
25475361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 170 - 651
Target Start/End: Original strand, 25340489 - 25340971
Alignment:
| Q |
170 |
aagcaagacataaatccaaagtc-atattgaaaacatcccacacaaacattacaaaaagaaaaagataaccacttaaaaatggattccaacacacgaaaa |
268 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||| | |||| |
|
|
| T |
25340489 |
aagcaagacataaatccaaaaaccatattgaaaacatcccacacaaacattacaaaaggaaaagaataaccacttaaaaatacattccaacgaattaaaa |
25340588 |
T |
|
| Q |
269 |
ctccaattgtacaaatgaaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatattaattctt |
368 |
Q |
| |
|
|||| || |||||||||||||||||| |||||| |||| ||||||| |||||||||||||||||||| |||| |||||||||||| |||||||||||| |
|
|
| T |
25340589 |
ctcctcttatacaaatgaaaataactagaccctgcttgcgctaagaatcaaagtcttgattttgattaacgacgcaataacatctgcaatattaattctt |
25340688 |
T |
|
| Q |
369 |
gctttaggtaaatcttcacaacaactgagggctaaaccaaaaatagctggtatgtaagtcaatatgtcatcaatttggtccccagttatttggactaaat |
468 |
Q |
| |
|
|||| |||| ||||||| ||||| | ||||||||||||||||||| || |||||| ||||||||||||||||||| || ||| || ||||||||||| |
|
|
| T |
25340689 |
gcttcaggtgaatcttctcaacatttcagggctaaaccaaaaatagatgacatgtaattcaatatgtcatcaatttgttctccaatttgttggactaaat |
25340788 |
T |
|
| Q |
469 |
ttgaatccatgacatcaataattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttggcttttttct |
568 |
Q |
| |
|
||||||||| ||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
25340789 |
ttgaatccaagacctccataattgaattaggaaatgatccactgatccatgtcttcaagtttagttcagcaacaaacatatcatctgttggctttcttct |
25340888 |
T |
|
| Q |
569 |
tgtaaagatttccattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactctgcat |
651 |
Q |
| |
|
||| ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
25340889 |
tgtgaagatttccattaacatgatcccatagctgtacacatctcctttgacagaaacaattcccttagatccatactctgcat |
25340971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 264 - 651
Target Start/End: Complemental strand, 24875897 - 24875509
Alignment:
| Q |
264 |
gaaaactccaattgtacaaatg-aaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatatta |
362 |
Q |
| |
|
|||||||||| || |||||| | |||||||||| ||||||||||| | ||||||||||| ||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
24875897 |
gaaaactccacttatacaaaaggaaaataactagaccctgtttgcgccaagaaccaaagccttgattttgattagcgacgcaataacatctgccgtattg |
24875798 |
T |
|
| Q |
363 |
attcttgctttaggtaaatcttcacaacaactgagggctaaaccaaaaatagctggtatgtaagtcaatatgtcatcaatttggtccccagttatttgga |
462 |
Q |
| |
|
|||||||||| |||| |||||||||||||||| |||||||||| |||||||| || |||| |||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
24875797 |
attcttgcttcaggtgaatcttcacaacaactcagggctaaactaaaaatagatgacatgtgagtcgatatatcatcaatttggtccccagttatttgga |
24875698 |
T |
|
| Q |
463 |
ctaaatttgaatccatgacatcaataattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttggctt |
562 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |
|
|
| T |
24875697 |
ctaaatttgaatccatgacctccataattgaattaggcaatgatccactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggcct |
24875598 |
T |
|
| Q |
563 |
ttttcttgtaaagatttccattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactctgcat |
651 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
24875597 |
ttttcttgtgaagatttccattagcataatcccatagctgtacacatctcctttgacagaaacaattcctttagatccatactctgcat |
24875509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 170 - 651
Target Start/End: Original strand, 25569396 - 25569878
Alignment:
| Q |
170 |
aagcaagacataaatccaaagtc-atattgaaaacatcccacacaaacattacaaaaagaaaaagataaccacttaaaaatggattccaacacacgaaaa |
268 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||| | |||| |
|
|
| T |
25569396 |
aagcaagacataaatccaaaaaccatattgaaaacatcccacacaaacattacaaaaggaaaagaataaccacttaaaaatacattccaacgaattaaaa |
25569495 |
T |
|
| Q |
269 |
ctccaattgtacaaatgaaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatattaattctt |
368 |
Q |
| |
|
|||| || |||||||||||||||||| |||||| |||| ||||||| |||||||||||||||||||| |||| |||||||||||| |||||||||||| |
|
|
| T |
25569496 |
ctcctcttatacaaatgaaaataactagaccctgcttgcgctaagaatcaaagtcttgattttgattaacgacgcaataacatctgcaatattaattctt |
25569595 |
T |
|
| Q |
369 |
gctttaggtaaatcttcacaacaactgagggctaaaccaaaaatagctggtatgtaagtcaatatgtcatcaatttggtccccagttatttggactaaat |
468 |
Q |
| |
|
|||| |||| ||||||| |||||| | ||||||||||||||||||| || |||||| ||||||||||||||||||| |||||| || ||||||||||| |
|
|
| T |
25569596 |
gcttcaggtgaatcttcgcaacaattcagggctaaaccaaaaatagatgacatgtaaatcaatatgtcatcaatttgttccccaatttgttggactaaat |
25569695 |
T |
|
| Q |
469 |
ttgaatccatgacatcaataattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttggcttttttct |
568 |
Q |
| |
|
||||||||| ||| || ||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
25569696 |
ttgaatccaagacctccataattgaatttggcaatgattcactgatccatgtcttcaaacttagttctgcaacaaatatatcatctgttggctttcttct |
25569795 |
T |
|
| Q |
569 |
tgtaaagatttccattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactctgcat |
651 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| || |||| |||| ||||||||| |
|
|
| T |
25569796 |
tgtgaagatttccattagcataatcccatagctgtaaatatctcctttcacagaaacaatccccttagttccacactctgcat |
25569878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 264 - 651
Target Start/End: Original strand, 25714777 - 25715165
Alignment:
| Q |
264 |
gaaaactccaattgtacaaatg-aaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatatta |
362 |
Q |
| |
|
|||||||||| ||||||||| | |||||||||| ||||||||||| | ||||||||||| ||| ||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
25714777 |
gaaaactccacttgtacaaaaggaaaataactagaccctgtttgcgccaagaaccaaagcctttattttcattagcgacgcaataacatctgccatatta |
25714876 |
T |
|
| Q |
363 |
attcttgctttaggtaaatcttcacaacaactgagggctaaaccaaaaatagctggtatgtaagtcaatatgtcatcaatttggtccccagttatttgga |
462 |
Q |
| |
|
|||||||||| |||| ||| |||||||||||| |||||||||| |||||||| || |||| |||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
25714877 |
attcttgcttcaggtgaattttcacaacaactcagggctaaactaaaaatagatgacatgtgagtcgatatatcatcaatttggtccccagttatttgga |
25714976 |
T |
|
| Q |
463 |
ctaaatttgaatccatgacatcaataattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttggctt |
562 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
25714977 |
ctaaatttgaatccatgacctccataattgaattaggcaatgattcactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggctt |
25715076 |
T |
|
| Q |
563 |
ttttcttgtaaagatttccattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactctgcat |
651 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||| |
|
|
| T |
25715077 |
ttttcttgttaagatttccattagcataatcccatagctgtacacgtctcctttgacagaaacaattcctctagaaccatactctgcat |
25715165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 279 - 668
Target Start/End: Original strand, 25452591 - 25452980
Alignment:
| Q |
279 |
acaaatgaaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatattaattcttgctttaggta |
378 |
Q |
| |
|
|||||||||| |||||| |||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||| |
|
|
| T |
25452591 |
acaaatgaaactaactagaccctgcttgcgctaagaaccaaagtcttgattttgattagcgacgcaataacatctgcaatattaattcttgcttcaggtg |
25452690 |
T |
|
| Q |
379 |
aatcttcacaacaactgagggctaaaccaaaaatagctggtatgtaagtcaatatgtcatcaatttggtccccagttatttggactaaatttgaatccat |
478 |
Q |
| |
|
|||||||||||||| | ||||||||||||||||||| || |||||||||||||||||||||||||| |||||| || |||||||||||||||||||| |
|
|
| T |
25452691 |
aatcttcacaacaattcagggctaaaccaaaaatagatgacatgtaagtcaatatgtcatcaatttgttccccaatttgttggactaaatttgaatccaa |
25452790 |
T |
|
| Q |
479 |
gacatcaataattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttggcttttttcttgtaaagatt |
578 |
Q |
| |
|
|| || |||||||||||||| ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
25452791 |
gatctccataattgaattaggaaatgatccactgatccatgtcttcaggcttagttctggaacaaacatatcatctgttggctttcttcttgtaaagatt |
25452890 |
T |
|
| Q |
579 |
tccattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactctgcatttaaatactagttatca |
668 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
25452891 |
tccattaacatgatcccatagctgtacacatctcctttgacggaaacaattcctttagatccatactctgcatgttaatactagttatca |
25452980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 257; E-Value: 1e-142
Query Start/End: Original strand, 278 - 666
Target Start/End: Original strand, 25646641 - 25647029
Alignment:
| Q |
278 |
tacaaatgaaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatattaattcttgctttaggt |
377 |
Q |
| |
|
|||||||||||||||||| || ||||||| | || ||||||||||||||||||| |||||| | |||||||||||||||||| |||||||||| |||| |
|
|
| T |
25646641 |
tacaaatgaaaataactagactgtgtttgcgccaacaaccaaagtcttgattttgtttagcgtcgcaataacatctgccatattgattcttgcttcaggt |
25646740 |
T |
|
| Q |
378 |
aaatcttcacaacaactgagggctaaaccaaaaatagctggtatgtaagtcaatatgtcatcaatttggtccccagttatttggactaaatttgaatcca |
477 |
Q |
| |
|
|||||||||||||| | |||||||||| |||||||| || |||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
25646741 |
gaatcttcacaacaattcagggctaaactaaaaatagatgacatgtgagtcaatatatcatcaatttggtccccagttctttggactaaatttgaatcca |
25646840 |
T |
|
| Q |
478 |
tgacatcaataattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttggcttttttcttgtaaagat |
577 |
Q |
| |
|
|||| || |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| | ||||||||||| |
|
|
| T |
25646841 |
tgacctccataattgaattaggcaatgatctactgatccatgtcttcaagcttagttctgcaacaaacatatcatctattggctttctccttgtaaagat |
25646940 |
T |
|
| Q |
578 |
ttccattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactctgcatttaaatactagttat |
666 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||| |
|
|
| T |
25646941 |
ttccattagcataatcccatagttgtacacatctcctttcacagaaacaattcctttcgatccatactctgcatgttaatactagttat |
25647029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 284 - 650
Target Start/End: Complemental strand, 24913527 - 24913161
Alignment:
| Q |
284 |
tgaaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatattaattcttgctttaggtaaatct |
383 |
Q |
| |
|
|||||||||||| | ||||||| | || |||||||||||||||||||||||||| | |||||||||||||||||| |||||||||| |||| ||||| |
|
|
| T |
24913527 |
tgaaaataactagattgtgtttgcgccaacaaccaaagtcttgattttgattagcgtcgcaataacatctgccatattgattcttgcttcaggtgaatct |
24913428 |
T |
|
| Q |
384 |
tcacaacaactgagggctaaaccaaaaatagctggtatgtaagtcaatatgtcatcaatttggtccccagttatttggactaaatttgaatccatgacat |
483 |
Q |
| |
|
||||||||| | |||||||||| |||||||| || |||| ||||||||| | |||||||||||||| |||||||||||||||||||||||||||||| | |
|
|
| T |
24913427 |
tcacaacaaatcagggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtcccaagttatttggactaaatttgaatccatgacct |
24913328 |
T |
|
| Q |
484 |
caataattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttggcttttttcttgtaaagatttccat |
583 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||| ||||||||||| |
|
|
| T |
24913327 |
ccataattgaattaggcaatgatccactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggcattattcttgtgaagatttccat |
24913228 |
T |
|
| Q |
584 |
tagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactctgca |
650 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
24913227 |
tagcataatcccatagctgtacacatctcctttcacagaaacaattcccttagatccatactctgca |
24913161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 278 - 666
Target Start/End: Original strand, 25489799 - 25490187
Alignment:
| Q |
278 |
tacaaatgaaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatattaattcttgctttaggt |
377 |
Q |
| |
|
|||||||||||||||||| || ||||||| | | ||| |||||||||||||||||||| | | |||||||||||||||||| |||||||||| |||| |
|
|
| T |
25489799 |
tacaaatgaaaataactagactgtgtttgcgccagcaactaaagtcttgattttgattagtgtcgcaataacatctgccatattgattcttgcttcaggt |
25489898 |
T |
|
| Q |
378 |
aaatcttcacaacaactgagggctaaaccaaaaatagctggtatgtaagtcaatatgtcatcaatttggtccccagttatttggactaaatttgaatcca |
477 |
Q |
| |
|
|||||||||||||||| | |||||||| |||||||| || |||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25489899 |
gaatcttcacaacaactcatggctaaactaaaaatagatgacatgtgagtcaatatattatcaatttggtccccagttatttggactaaatttgaatcca |
25489998 |
T |
|
| Q |
478 |
tgacatcaataattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttggcttttttcttgtaaagat |
577 |
Q |
| |
|
|||| || ||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||| ||| | ||||||||||| |
|
|
| T |
25489999 |
tgacctccataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctattggttttctccttgtaaagat |
25490098 |
T |
|
| Q |
578 |
ttccattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactctgcatttaaatactagttat |
666 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
25490099 |
ttccattagcataatcccatagctgtacacatctcctttgacagaaacaattcctttagatccatactctgcatgttaatactagttat |
25490187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 278 - 665
Target Start/End: Original strand, 25694959 - 25695346
Alignment:
| Q |
278 |
tacaaatgaaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatattaattcttgctttaggt |
377 |
Q |
| |
|
|||||||||||||||||| || ||||||| | || ||||||||| |||||||||||||||| | |||||||||||||||||| |||||||||| |||| |
|
|
| T |
25694959 |
tacaaatgaaaataactagactgtgtttgcgcgaacaaccaaagtgttgattttgattagcgtcgcaataacatctgccatattgattcttgcttcaggt |
25695058 |
T |
|
| Q |
378 |
aaatcttcacaacaactgagggctaaaccaaaaatagctggtatgtaagtcaatatgtcatcaatttggtccccagttatttggactaaatttgaatcca |
477 |
Q |
| |
|
|||| ||||||||||| || ||||||| |||||||| || |||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25695059 |
gaatcctcacaacaacttagagctaaactaaaaatagatgacatgtgagtcaatatattatcaatttggtccccagttatttggactaaatttgaatcca |
25695158 |
T |
|
| Q |
478 |
tgacatcaataattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttggcttttttcttgtaaagat |
577 |
Q |
| |
|
|||| || ||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
25695159 |
tgacctccataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggctttcttcttgtgaagat |
25695258 |
T |
|
| Q |
578 |
ttccattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactctgcatttaaatactagtta |
665 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||| ||||||||||||| | |||| |||||| |
|
|
| T |
25695259 |
ttccattagcataatcccatagctgaacacgtctcctttcacagaaacaattcctctagaaccatactctgcatgttaataatagtta |
25695346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 278 - 670
Target Start/End: Original strand, 25799885 - 25800277
Alignment:
| Q |
278 |
tacaaatgaaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatattaattcttgctttaggt |
377 |
Q |
| |
|
|||||| ||||||||||| || ||||||| | || |||||||||||||||||||||||||| | |||||||||||||||||| ||||| || | |||| |
|
|
| T |
25799885 |
tacaaacgaaaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgtcgcaataacatctgccatattgattctggcatcaggt |
25799984 |
T |
|
| Q |
378 |
aaatcttcacaacaactgagggctaaaccaaaaatagctggtatgtaagtcaatatgtcatcaatttggtccccagttatttggactaaatttgaatcca |
477 |
Q |
| |
|
| |||||||| ||| | | ||||||| ||||||| || |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25799985 |
gattcttcacagcaattcaatgctaaactaaaaatatatgacatgtgagtcaatatatcatcaatttggtccccagttatttggactaaatttgaatcca |
25800084 |
T |
|
| Q |
478 |
tgacatcaataattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttggcttttttcttgtaaagat |
577 |
Q |
| |
|
|||| || || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
25800085 |
tgacctccatgattgaattaggcaatgatccactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggctttcttcttgtgaagat |
25800184 |
T |
|
| Q |
578 |
ttccattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactctgcatttaaatactagttatcaaa |
670 |
Q |
| |
|
|||||||| ||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
25800185 |
ttccattaacatgatcccatagctgtacacatctcctttgacggaaacaattcctttagatccatactctgcatgttaatactagttatcaaa |
25800277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 284 - 651
Target Start/End: Original strand, 25322261 - 25322628
Alignment:
| Q |
284 |
tgaaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatattaattcttgctttaggtaaatct |
383 |
Q |
| |
|
|||||||||||| || ||||||| | || ||||||||| |||||||||||||||| | |||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
25322261 |
tgaaaataactagactgtgtttgcgccaacaaccaaagtgttgattttgattagcgtcgcaataacatctgccatattgattcttgctttaggtgaatct |
25322360 |
T |
|
| Q |
384 |
tcacaacaactgagggctaaaccaaaaatagctggtatgtaagtcaatatgtcatcaatttggtccccagttatttggactaaatttgaatccatgacat |
483 |
Q |
| |
|
||||||||||| |||||||||| |||||||| || ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
25322361 |
tcacaacaactcagggctaaactaaaaatagatgatatgtgagtcgatagatcatcaatttggtccccagttatttggactaaatttgaatccatgacct |
25322460 |
T |
|
| Q |
484 |
caataattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttggcttttttcttgtaaagatttccat |
583 |
Q |
| |
|
| ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
25322461 |
ccataatggaattaggcaatgattgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggctttcttcttgtgaagatttccat |
25322560 |
T |
|
| Q |
584 |
tagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactctgcat |
651 |
Q |
| |
|
|| ||| ||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||| |
|
|
| T |
25322561 |
tatcattatcccatagctgtacacgtctcctttgacagaaacaattcctctagaaccatactctgcat |
25322628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 278 - 651
Target Start/End: Original strand, 25604236 - 25604609
Alignment:
| Q |
278 |
tacaaatgaaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatattaattcttgctttaggt |
377 |
Q |
| |
|
|||||||||||||||||| || |||||| | || |||||||||||||||||||||||| || |||||| ||||||||||| |||||||||| |||| |
|
|
| T |
25604236 |
tacaaatgaaaataactagactgcgtttgcgccaacaaccaaagtcttgattttgattagtgaagcaataacttctgccatattgattcttgcttcaggt |
25604335 |
T |
|
| Q |
378 |
aaatcttcacaacaactgagggctaaaccaaaaatagctggtatgtaagtcaatatgtcatcaatttggtccccagttatttggactaaatttgaatcca |
477 |
Q |
| |
|
|||||||||||||||| || ||||||| |||||||| || |||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
25604336 |
gaatcttcacaacaactcagagctaaactaaaaatagatgacatgtgagtcaatatatcatcaatttcgtccccagttatttggactaaatttgaatcca |
25604435 |
T |
|
| Q |
478 |
tgacatcaataattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttggcttttttcttgtaaagat |
577 |
Q |
| |
|
|||| || ||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| | |||||||||| |
|
|
| T |
25604436 |
tgacctccataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctattggctttctctttgtaaagat |
25604535 |
T |
|
| Q |
578 |
ttccattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactctgcat |
651 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| |
|
|
| T |
25604536 |
ttccattagcataattccatagctgtacacatctcctttgacagaaacaattcctctagaaccatactctgcat |
25604609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 287 - 651
Target Start/End: Original strand, 25685255 - 25685619
Alignment:
| Q |
287 |
aaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatattaattcttgctttaggtaaatcttca |
386 |
Q |
| |
|
||||||||| ||||||||||| | ||||||||||| ||| ||||| ||||||||| |||||||||||||||||| |||||||| | |||| | |||||| |
|
|
| T |
25685255 |
aaataactagaccctgtttgcgccaagaaccaaagcctttattttcattagcgacacaataacatctgccatattgattcttgcatcaggtgattcttca |
25685354 |
T |
|
| Q |
387 |
caacaactgagggctaaaccaaaaatagctggtatgtaagtcaatatgtcatcaatttggtccccagttatttggactaaatttgaatccatgacatcaa |
486 |
Q |
| |
|
|||||| | | ||||||| |||||||| || |||| ||||||||| ||||||||| ||||||||||| |||||||||||||||||||| ||| || | |
|
|
| T |
25685355 |
caacaattcaatgctaaactaaaaatagatgacatgtgagtcaatatatcatcaattgtgtccccagttagttggactaaatttgaatccaggacctcca |
25685454 |
T |
|
| Q |
487 |
taattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttggcttttttcttgtaaagatttccattag |
586 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||| |
|
|
| T |
25685455 |
taattgaattaggcaatgatccaatgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggctttcttcttgtgaaaatttccattag |
25685554 |
T |
|
| Q |
587 |
cataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactctgcat |
651 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
25685555 |
cataatcccatagctgtacacatctcctttgaccgaaacaattcctttagatccatactctgcat |
25685619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 281 - 651
Target Start/End: Complemental strand, 22901598 - 22901228
Alignment:
| Q |
281 |
aaatgaaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatattaattcttgctttaggtaaa |
380 |
Q |
| |
|
|||| |||||||||| ||| ||||| | |||||||| ||||||||||||||||||| ||| ||||||||| |||||||||||||| ||| |||| || |
|
|
| T |
22901598 |
aaattaaaataactagaccatgttttcatcaagaaccatagtcttgattttgattagcatcttgataacatcttccatattaattctttcttcaggtgaa |
22901499 |
T |
|
| Q |
381 |
tcttcacaacaactgagggctaaaccaaaaatagctggtatgtaagtcaatatgtcatcaatttggtccccagttatttggactaaatttgaatccatga |
480 |
Q |
| |
|
|||| |||||| | ||||||||||||||||||| || ||| || |||||||||||||||||| ||||| || ||||||||| | ||||||| || |
|
|
| T |
22901498 |
tctttgcaacaattcagggctaaaccaaaaatagatgacatgcaactcaatatgtcatcaattttccccccattttgttggactaacctagaatccaaga |
22901399 |
T |
|
| Q |
481 |
catcaataattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttggcttttttcttgtaaagatttc |
580 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||||||||| |||| ||| | |||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
22901398 |
catccataattgaattaggcaatgattcactgatccatgtcttcaaagttaggtcttctacaaacatatcatctgttggctttcttcttgtaaagatttc |
22901299 |
T |
|
| Q |
581 |
cattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactctgcat |
651 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| ||| |||||||||| |
|
|
| T |
22901298 |
cattagcataatcccatagctgtatacatctcctttgatagaaacaattcctttagttccgtactctgcat |
22901228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 284 - 559
Target Start/End: Original strand, 25385662 - 25385937
Alignment:
| Q |
284 |
tgaaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatattaattcttgctttaggtaaatct |
383 |
Q |
| |
|
|||||||||||| || ||||||| | || ||||||||| |||||||||||||||| | |||||||||||||||||| |||||||||| | || ||||| |
|
|
| T |
25385662 |
tgaaaataactagactgtgtttgcgccaacaaccaaagtgttgattttgattagcgtcgcaataacatctgccatattgattcttgcttcaagtgaatct |
25385761 |
T |
|
| Q |
384 |
tcacaacaactgagggctaaaccaaaaatagctggtatgtaagtcaatatgtcatcaatttggtccccagttatttggactaaatttgaatccatgacat |
483 |
Q |
| |
|
||||||||||| | |||||||| |||||||| || |||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
25385762 |
tcacaacaactcaaggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaaatttgaatccatgacct |
25385861 |
T |
|
| Q |
484 |
caataattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttgg |
559 |
Q |
| |
|
| ||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
25385862 |
ccataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttgg |
25385937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 317 - 651
Target Start/End: Original strand, 23257574 - 23257908
Alignment:
| Q |
317 |
caaagtcttgattttgattagcgacttaataacatctgccatattaattcttgctttaggtaaatcttcacaacaactgagggctaaaccaaaaatagct |
416 |
Q |
| |
|
|||||||||||||||||| || ||| ||||||||||| |||||||||||||| || || ||| ||| |||||| ||||||||||||||||||| | |
|
|
| T |
23257574 |
caaagtcttgattttgatgagtgacgcaataacatctgtcatattaattcttgattcagaagaatattcgcaacaatgcagggctaaaccaaaaatagat |
23257673 |
T |
|
| Q |
417 |
ggtatgtaagtcaatatgtcatcaatttggtccccagttatttggactaaatttgaatccatgacatcaataattgaattaggcaatgatccactgatcc |
516 |
Q |
| |
|
| |||| |||||| || ||||||| ||| |||||| | |||||||||||| ||||| | ||| || |||||||||||||||||||||||| ||||| |
|
|
| T |
23257674 |
gacatgtgagtcaaaatatcatcaagttgttccccaaattgttggactaaattagaatctaagacctccataattgaattaggcaatgatccatcgatcc |
23257773 |
T |
|
| Q |
517 |
atgtcttcaagtttagttctgcaacaaacatatcatctgttggcttttttcttgtaaagatttccattagcataatcccatagctgtacacatctccttt |
616 |
Q |
| |
|
|||||||||| |||||||| |||| ||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
23257774 |
atgtcttcaaacttagttcttcaacgaacatatcatctgttggctttctccttgtgaagatttccattagcataatcccatagctgtatacatctccttt |
23257873 |
T |
|
| Q |
617 |
cacagaaacaattcctttagatccatactctgcat |
651 |
Q |
| |
|
||||||| | |||| || |||||||||||||||| |
|
|
| T |
23257874 |
gacagaaatagttccctttgatccatactctgcat |
23257908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 264 - 414
Target Start/End: Complemental strand, 24885734 - 24885583
Alignment:
| Q |
264 |
gaaaactccaattgtacaaatg-aaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatatta |
362 |
Q |
| |
|
|||||||||| || |||||| | |||||||||| ||||||||||| | ||||||||||| ||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
24885734 |
gaaaactccacttatacaaaaggaaaataactagaccctgtttgcgccaagaaccaaagccttgattttgattagcgacgcaataacatctgccgtattg |
24885635 |
T |
|
| Q |
363 |
attcttgctttaggtaaatcttcacaacaactgagggctaaaccaaaaatag |
414 |
Q |
| |
|
|||||||||| |||| |||||||||||||||| |||||||||| |||||||| |
|
|
| T |
24885634 |
attcttgcttcaggtgaatcttcacaacaactcagggctaaactaaaaatag |
24885583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 193 - 452
Target Start/End: Original strand, 29429048 - 29429305
Alignment:
| Q |
193 |
atattgaaaacatcccacacaaacattacaaaaagaaaaagataaccacttaaaaatggattccaacacacgaaaactccaattgtacaaatgaaaataa |
292 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||||| |||| ||| |||| || |||| || ||||||| | |||||| ||||||||||| |
|
|
| T |
29429048 |
atattgaaaacatcccatacaaacattacaaaaggaaaaa-ataaacacctaaacatacattctaaagagttaaaactctacttgtacgaatgaaaataa |
29429146 |
T |
|
| Q |
293 |
ctataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatattaattcttgctttaggtaaatcttcacaacaa |
392 |
Q |
| |
|
|| |||| ||||| ||||| |||||||||||||||||||||| || ||||||||| ||||||||||||||| |||||| || |||||||||| |
|
|
| T |
29429147 |
ctggaccccatttgcatcaagaaacaaagtcttgattttgattagc-acccaataacatccaccatattaattcttgttttaggcgaacattcacaacaa |
29429245 |
T |
|
| Q |
393 |
ctgagggctaaaccaaaaatagctggtatgtaagtcaatatgtcatcaatttggtcccca |
452 |
Q |
| |
|
| ||| ||||||||||||||| || ||||| |||||||||||||||||||| |||||| |
|
|
| T |
29429246 |
ttcaggactaaaccaaaaatagaaggcatgtatgtcaatatgtcatcaatttgttcccca |
29429305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 96 - 159
Target Start/End: Original strand, 25569295 - 25569358
Alignment:
| Q |
96 |
gcactagttgattcttttaacagctaaaggaaatatattaagaaaatggtgtacttcaatctca |
159 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25569295 |
gcactagttgattcttttaacagctagaggaaatatattaagaaaatggtgtacttcaatctca |
25569358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 25340394 - 25340454
Alignment:
| Q |
99 |
ctagttgattcttttaacagctaaaggaaatatattaagaaaatggtgtacttcaatctca |
159 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25340394 |
ctagttgattcttttaacagctagaggaaatatattaagaaaatggtgtacttcaatctca |
25340454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 25569235 - 25569294
Alignment:
| Q |
14 |
cagagacgaaacaaattgagagaggatacaacataaatgaaaacatcacacataatttac |
73 |
Q |
| |
|
|||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
25569235 |
cagagaggaaacaaattgagagaggaaacaacataaatgaaaacatcacacatgatttac |
25569294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 27 - 142
Target Start/End: Original strand, 25694738 - 25694853
Alignment:
| Q |
27 |
aattgagagaggatacaacataaatgaaaacatcacacataatttacatgcttgtgatatgatccttatgcactagttgattcttttaacagctaaagga |
126 |
Q |
| |
|
||||||||| |||||||||||||||| | ||| ||||| |||||||||||| || ||||||||||| ||||||| |||| ||||| ||| |||||| |
|
|
| T |
25694738 |
aattgagaggggatacaacataaatggatacagtacacacgatttacatgcttctgtgatgatccttattcactagtcgatttctttaaaagcaaaagga |
25694837 |
T |
|
| Q |
127 |
aatatattaagaaaat |
142 |
Q |
| |
|
||||||||||| |||| |
|
|
| T |
25694838 |
aatatattaaggaaat |
25694853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 68 - 161
Target Start/End: Original strand, 25604037 - 25604130
Alignment:
| Q |
68 |
atttacatgcttgtgatatgatccttatgcactagttgattcttttaacagctaaaggaaatatattaagaaaatggtgtacttcaatctcata |
161 |
Q |
| |
|
|||||||||||| || ||||||||||| |||||||||||| ||||| || ||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
25604037 |
atttacatgcttctgtgatgatccttattcactagttgatttctttaaacgcaaaaggaaatatattaagaagataatgtacttcaatctcata |
25604130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 25340339 - 25340390
Alignment:
| Q |
22 |
aaacaaattgagagaggatacaacataaatgaaaacatcacacataatttac |
73 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
25340339 |
aaacaaattgagagaggaaacaacataaatgaaaacatcacacatgatttac |
25340390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 137
Target Start/End: Original strand, 25322043 - 25322151
Alignment:
| Q |
27 |
aattgagagaggatacaacataaatgaaaacatcacacataatttacatgcttgtgatatgatccttatgcactagttgattcttttaacagctaaagga |
126 |
Q |
| |
|
||||||||| |||||||| |||||| | ||| ||||| ||||||||||||| || ||||||||||| ||||||| |||| ||||| ||| |||||| |
|
|
| T |
25322043 |
aattgagaggggatacaa--taaatggatacagtacacacaatttacatgcttctgtgatgatccttattcactagtcgatttctttaaaagcaaaagga |
25322140 |
T |
|
| Q |
127 |
aatatattaag |
137 |
Q |
| |
|
||||||||||| |
|
|
| T |
25322141 |
aatatattaag |
25322151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 25452400 - 25452458
Alignment:
| Q |
14 |
cagagacgaaacaaattgagagaggatacaacataaatgaaaacatcacacataatttac |
73 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| ||||||||| ||| |||||| |
|
|
| T |
25452400 |
cagagacaaaacaaattgagagaggatacaacataaatg-aaacatcacccatgatttac |
25452458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 25489586 - 25489697
Alignment:
| Q |
27 |
aattgagagaggatacaacataaatgaaaacatcacacataatttacatgcttgtgatatgatccttatgcactagttgattcttttaacagctaaagga |
126 |
Q |
| |
|
||||||||| |||||||||||||||| | ||| ||||| |||||||||||| || |||||||||| ||||||| |||| ||||| ||| |||||| |
|
|
| T |
25489586 |
aattgagaggggatacaacataaatggatacaatacacacgatttacatgcttctgtgttgatccttattcactagtcgatttctttaaaagcaaaagga |
25489685 |
T |
|
| Q |
127 |
aatatattaaga |
138 |
Q |
| |
|
|| |||| |||| |
|
|
| T |
25489686 |
aacatatgaaga |
25489697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 25694884 - 25694946
Alignment:
| Q |
171 |
agcaagacataaatccaaagtca-tattgaaaacatcccacacaaacattacaaaaagaaaaa |
232 |
Q |
| |
|
|||||||||| |||||||| || ||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
25694884 |
agcaagacatcaatccaaaaacaatattgaaaacatcaaacacaaacattacaaaaggaaaaa |
25694946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 25799809 - 25799871
Alignment:
| Q |
171 |
agcaagacataaatccaaagtca-tattgaaaacatcccacacaaacattacaaaaagaaaaa |
232 |
Q |
| |
|
|||||||||| |||||||| || ||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
25799809 |
agcaagacatcaatccaaaaacaatattgaaaacatcaaacacaaacattacaaaaggaaaaa |
25799871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 25604161 - 25604222
Alignment:
| Q |
171 |
agcaagacataaatccaaagtcatattgaaaacatcccacacaaacattacaaaaagaaaaa |
232 |
Q |
| |
|
|||||||||| ||| |||| |||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
25604161 |
agcaagacatcaatacaaaacaatattgaaaacatcaaacacaaacattacaaaaggaaaaa |
25604222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 257; Significance: 1e-142; HSPs: 1)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 257; E-Value: 1e-142
Query Start/End: Original strand, 278 - 650
Target Start/End: Complemental strand, 17520 - 17148
Alignment:
| Q |
278 |
tacaaatgaaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatattaattcttgctttaggt |
377 |
Q |
| |
|
|||||||||||||||||| || ||||||| | || |||||||||||||||||||||||||| | |||||||||||||||||| |||||||||| |||| |
|
|
| T |
17520 |
tacaaatgaaaataactagactgtgtttgcgccaacaaccaaagtcttgattttgattagcgtcgcaataacatctgccatattgattcttgcttcaggt |
17421 |
T |
|
| Q |
378 |
aaatcttcacaacaactgagggctaaaccaaaaatagctggtatgtaagtcaatatgtcatcaatttggtccccagttatttggactaaatttgaatcca |
477 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||| || |||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17420 |
gaatcttcacaacaactcagggctaaactaaaaatagatgacatgtgagtcgatatatcatcaatttggtccccagttatttggactaaatttgaatcca |
17321 |
T |
|
| Q |
478 |
tgacatcaataattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttggcttttttcttgtaaagat |
577 |
Q |
| |
|
|| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
17320 |
agagctccataattgaattaggcaatgatccactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggctttcttcttgtaaagat |
17221 |
T |
|
| Q |
578 |
ttccattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactctgca |
650 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
17220 |
ttccattagcataatcccatagctgtacacgtctcctttgacagaaacaattcccttagatccatactctgca |
17148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0830 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0830
Description:
Target: scaffold0830; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 277 - 666
Target Start/End: Complemental strand, 4971 - 4582
Alignment:
| Q |
277 |
gtacaaatgaaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatattaattcttgctttagg |
376 |
Q |
| |
|
||||||||||||||||||| ||| ||||| | |||| || ||||||||||||| ||||||||| ||||||||||| ||||||||||||||||| || |
|
|
| T |
4971 |
gtacaaatgaaaataactacaccatgtttaccctaaacactgaagtcttgatttttattagcgacgcaataacatctgtcatattaattcttgcttccgg |
4872 |
T |
|
| Q |
377 |
taaatcttcacaacaactgagggctaaaccaaaaatagctggtatgtaagtcaatatgtcatcaatttggtccccagttatttggactaaatttgaatcc |
476 |
Q |
| |
|
| ||| ||| |||||| | | |||||||||||||||| || || | | ||||||| |||||| ||| ||| || || ||||||||||||||||||| |
|
|
| T |
4871 |
tgaatattcgcaacaattcaaagctaaaccaaaaatagatgacatatgaatcaatatatcatcagtttcttcctcaatttgttggactaaatttgaatcc |
4772 |
T |
|
| Q |
477 |
atgacatcaataattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttggcttttttcttgtaaaga |
576 |
Q |
| |
|
| ||| | ||||||||||||||||||||| || ||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| || |||| |
|
|
| T |
4771 |
aagaccttcataattgaattaggcaatgattcattgatccatgatttcaaacttagttctgcaacaaacatatcatctgttggctttcttctggtgaaga |
4672 |
T |
|
| Q |
577 |
tttccattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactctgcatttaaatactagttat |
666 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4671 |
tttccattagcataatcccatagctgtacacatctcctttgacagaaacaattcctttagatccatactctgcatttaaatactagttat |
4582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 311 - 651
Target Start/End: Original strand, 10323502 - 10323839
Alignment:
| Q |
311 |
aagaaccaaagtcttgattttgattagcgacttaataacatctgccatattaattcttgctttaggtaaatcttcacaacaactgagggctaaaccaaaa |
410 |
Q |
| |
|
||||||||||||||| ||||||||||| ||| |||||||||| ||||||| |||||||||| |||| |||||||||||||| | |||| ||||| |||| |
|
|
| T |
10323502 |
aagaaccaaagtctttattttgattagagacgcaataacatcttccatattgattcttgcttcaggtgaatcttcacaacaattcagggataaactaaaa |
10323601 |
T |
|
| Q |
411 |
atagctggtatgtaagtcaatatgtcatcaatttggtccccagttatttggactaaatttgaatccatgacatcaataattgaattaggcaatgatccac |
510 |
Q |
| |
|
|||| || |||| | | ||| |||||||| |||||| ||| |||||||||||| ||||||| ||| || ||||||| ||||||||||||||||| |
|
|
| T |
10323602 |
atagatgacatgtgaaacgatag---atcaatttcatccccatttagttggactaaattagaatccaagacctccataattgcattaggcaatgatccac |
10323698 |
T |
|
| Q |
511 |
tgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttggcttttttcttgtaaagatttccattagcataatcccatagctgtacacatc |
610 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| || |
|
|
| T |
10323699 |
tgatccatgtcttcaagcttagttctgcagcaaacatatcatctgttggctttcttcttgtgaagatttccattagcataatcccatagctgtacacgtc |
10323798 |
T |
|
| Q |
611 |
tcctttcacagaaacaattcctttagatccatactctgcat |
651 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10323799 |
tcctttgacagaaacaattcctttagatccatactctgcat |
10323839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 56; Significance: 9e-23; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 461 - 648
Target Start/End: Complemental strand, 16886915 - 16886728
Alignment:
| Q |
461 |
gactaaatttgaatccatgacatcaataattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttggc |
560 |
Q |
| |
|
||||||||| |||||| || || |||| ||||||||||| ||| |||| |||||||| || ||| ||| |||| |||||||| |||| ||||||| |
|
|
| T |
16886915 |
gactaaattgtaatccacaacttccataactgaattaggcattgactcactaatccatgtttttaaggttaattcttgtacaaacatttcatttgttggc |
16886816 |
T |
|
| Q |
561 |
ttttttcttgtaaagatttccattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactctg |
648 |
Q |
| |
|
|| |||| ||| ||||||||||||||||| | ||||| ||||||||||||||||| | ||||| | ||| |||||||||||||||| |
|
|
| T |
16886815 |
ttctttcctgtgaagatttccattagcattactccataactgtacacatctcctttaatagaaatgactcccttagatccatactctg |
16886728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 648
Target Start/End: Original strand, 14411927 - 14412033
Alignment:
| Q |
542 |
aaacatatcatctgttggcttttttcttgtaaagatttccattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatcca |
641 |
Q |
| |
|
|||||| |||| ||||||||| |||| || || | |||||||||||| |||||||||||||||||||||||||| ||||||| | ||||||||||||| |
|
|
| T |
14411927 |
aaacatttcatttgttggcttctttccggtgaacagttccattagcattatcccatagctgtacacatctcctttaacagaaatgactcctttagatcca |
14412026 |
T |
|
| Q |
642 |
tactctg |
648 |
Q |
| |
|
||||||| |
|
|
| T |
14412027 |
tactctg |
14412033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 55; Significance: 3e-22; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 461 - 647
Target Start/End: Original strand, 5079639 - 5079825
Alignment:
| Q |
461 |
gactaaatttgaatccatgacatcaataattgaattaggcaatgatccactgatccatgtcttcaagtttagttctgcaacaaacatatcatctgttggc |
560 |
Q |
| |
|
|||||| |||||||||| || || |||| |||||| | | |||| |||| ||||| || |||||| ||| |||| | ||||||| |||||||||||| |
|
|
| T |
5079639 |
gactaattttgaatccacaacttccataactgaattgtgtattgattcactaatccaagttttcaaggttaattcttctgcaaacatttcatctgttggc |
5079738 |
T |
|
| Q |
561 |
ttttttcttgtaaagatttccattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatccatactct |
647 |
Q |
| |
|
|| |||| ||| ||||||||||||||||| || ||| |||| |||||||||||||| || |||| | ||| ||||||||||||||| |
|
|
| T |
5079739 |
ttctttcctgtgaagatttccattagcattattccaaagctatacacatctcctttaactgaaattactcccttagatccatactct |
5079825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 648
Target Start/End: Complemental strand, 5102573 - 5102467
Alignment:
| Q |
542 |
aaacatatcatctgttggcttttttcttgtaaagatttccattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatcca |
641 |
Q |
| |
|
|||||| |||| ||||||| | |||| || || |||||||||||||| |||||||||||||||||||||||||| || |||| ||||| |||||||| |
|
|
| T |
5102573 |
aaacatttcatttgttggcatctttccggtgaacatttccattagcattatcccatagctgtacacatctcctttaactgaaatgattccgctagatcca |
5102474 |
T |
|
| Q |
642 |
tactctg |
648 |
Q |
| |
|
||||||| |
|
|
| T |
5102473 |
tactctg |
5102467 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 648
Target Start/End: Complemental strand, 5120198 - 5120092
Alignment:
| Q |
542 |
aaacatatcatctgttggcttttttcttgtaaagatttccattagcataatcccatagctgtacacatctcctttcacagaaacaattcctttagatcca |
641 |
Q |
| |
|
|||||| |||| ||||||||| |||| || || |||||||||||||| |||||||||||||||||||||||||| || |||| || || |||||||| |
|
|
| T |
5120198 |
aaacatttcatttgttggcttctttccggtgaacatttccattagcattatcccatagctgtacacatctcctttaactgaaatgatccccctagatcca |
5120099 |
T |
|
| Q |
642 |
tactctg |
648 |
Q |
| |
|
||||||| |
|
|
| T |
5120098 |
tactctg |
5120092 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 348 - 414
Target Start/End: Original strand, 5079526 - 5079592
Alignment:
| Q |
348 |
acatctgccatattaattcttgctttaggtaaatcttcacaacaactgagggctaaaccaaaaatag |
414 |
Q |
| |
|
||||||| |||||||| |||||| | |||||||||||||||||| || | |||||| ||||||||| |
|
|
| T |
5079526 |
acatctgtcatattaactcttgcctcaggtaaatcttcacaacacctcaatgctaaaacaaaaatag |
5079592 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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