View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9261_low_66 (Length: 225)

Name: NF9261_low_66
Description: NF9261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9261_low_66
NF9261_low_66
[»] chr6 (24 HSPs)
chr6 (1-150)||(10826097-10826246)
chr6 (2-140)||(33898961-33899099)
chr6 (7-140)||(21254835-21254967)
chr6 (1-142)||(6208017-6208157)
chr6 (1-144)||(13739212-13739354)
chr6 (1-144)||(13744712-13744854)
chr6 (1-140)||(29409207-29409346)
chr6 (36-112)||(17829982-17830058)
chr6 (53-149)||(32599409-32599505)
chr6 (1-99)||(16442347-16442445)
chr6 (32-144)||(1312391-1312503)
chr6 (11-86)||(16548155-16548230)
chr6 (1-115)||(31132470-31132583)
chr6 (32-112)||(5584033-5584112)
chr6 (2-112)||(699564-699673)
chr6 (38-139)||(29399750-29399850)
chr6 (33-112)||(3605736-3605814)
chr6 (35-114)||(16121983-16122062)
chr6 (58-112)||(15151489-15151543)
chr6 (2-112)||(21455889-21455997)
chr6 (52-112)||(26274611-26274671)
chr6 (36-82)||(25208723-25208769)
chr6 (29-69)||(29240407-29240447)
chr6 (32-84)||(29682204-29682256)
[»] chr7 (48 HSPs)
chr7 (5-143)||(48459741-48459879)
chr7 (1-140)||(37562597-37562736)
chr7 (12-137)||(47217487-47217612)
chr7 (1-112)||(3622431-3622542)
chr7 (5-144)||(32186971-32187110)
chr7 (5-139)||(41715688-41715822)
chr7 (3-140)||(43737882-43738019)
chr7 (33-140)||(37639489-37639596)
chr7 (11-138)||(38230105-38230232)
chr7 (34-140)||(10371901-10372007)
chr7 (3-112)||(3375519-3375628)
chr7 (1-145)||(44967337-44967481)
chr7 (1-139)||(3342817-3342955)
chr7 (27-137)||(47021972-47022082)
chr7 (5-136)||(386428-386559)
chr7 (35-142)||(46541661-46541768)
chr7 (1-135)||(12632031-12632165)
chr7 (1-143)||(34010367-34010507)
chr7 (1-136)||(34010908-34011043)
chr7 (32-140)||(42752134-42752242)
chr7 (1-137)||(43631642-43631777)
chr7 (1-117)||(9456132-9456247)
chr7 (5-137)||(39391083-39391215)
chr7 (2-84)||(32205953-32206035)
chr7 (1-103)||(42740419-42740521)
chr7 (5-107)||(42904584-42904686)
chr7 (27-108)||(3750739-3750820)
chr7 (32-140)||(39634108-39634216)
chr7 (60-139)||(19097483-19097562)
chr7 (7-82)||(33746422-33746497)
chr7 (1-112)||(34365953-34366063)
chr7 (34-112)||(20088929-20089007)
chr7 (35-112)||(12964659-12964736)
chr7 (42-142)||(24770852-24770952)
chr7 (32-140)||(39977610-39977718)
chr7 (1-120)||(36920141-36920260)
chr7 (32-114)||(4228605-4228686)
chr7 (7-82)||(1766458-1766533)
chr7 (1-112)||(48134607-48134717)
chr7 (1-142)||(37008294-37008432)
chr7 (31-96)||(16079459-16079524)
chr7 (34-83)||(38494276-38494325)
chr7 (9-112)||(2839326-2839428)
chr7 (32-82)||(37148611-37148661)
chr7 (32-82)||(41625514-41625564)
chr7 (55-144)||(40903107-40903196)
chr7 (14-83)||(45557440-45557509)
chr7 (14-82)||(40491653-40491721)
[»] chr5 (41 HSPs)
chr5 (1-142)||(39987918-39988059)
chr5 (1-140)||(8049004-8049143)
chr5 (1-145)||(40885230-40885375)
chr5 (1-138)||(13253038-13253174)
chr5 (11-140)||(22482219-22482348)
chr5 (1-112)||(3667874-3667985)
chr5 (1-140)||(35760209-35760348)
chr5 (8-142)||(16158416-16158550)
chr5 (1-140)||(7385885-7386024)
chr5 (1-140)||(40791023-40791161)
chr5 (1-138)||(9275439-9275576)
chr5 (1-142)||(42146328-42146468)
chr5 (9-112)||(4292177-4292280)
chr5 (1-140)||(40495311-40495450)
chr5 (6-112)||(32030739-32030845)
chr5 (7-143)||(7178804-7178939)
chr5 (1-140)||(32454557-32454696)
chr5 (27-139)||(41834938-41835050)
chr5 (1-136)||(24045851-24045985)
chr5 (2-112)||(3060205-3060314)
chr5 (6-114)||(23914233-23914341)
chr5 (5-137)||(34106903-34107035)
chr5 (1-112)||(41740574-41740685)
chr5 (1-142)||(2430248-2430388)
chr5 (8-136)||(27021156-27021283)
chr5 (3-142)||(5710337-5710475)
chr5 (1-112)||(7714960-7715071)
chr5 (1-139)||(33953856-33953993)
chr5 (27-140)||(10058120-10058233)
chr5 (31-114)||(19784863-19784946)
chr5 (32-83)||(2483724-2483775)
chr5 (43-84)||(4569089-4569130)
chr5 (32-84)||(22811077-22811129)
chr5 (9-100)||(20068942-20069033)
chr5 (32-134)||(33467951-33468053)
chr5 (58-112)||(35847871-35847925)
chr5 (35-84)||(24036627-24036676)
chr5 (1-66)||(28869530-28869595)
chr5 (32-112)||(19203986-19204065)
chr5 (32-82)||(29922993-29923043)
chr5 (31-84)||(2868362-2868415)
[»] chr4 (71 HSPs)
chr4 (1-138)||(39636776-39636913)
chr4 (5-143)||(48550212-48550350)
chr4 (1-142)||(46830023-46830164)
chr4 (1-144)||(6138572-6138715)
chr4 (5-148)||(25312710-25312853)
chr4 (1-145)||(32238010-32238153)
chr4 (1-112)||(29149291-29149402)
chr4 (1-140)||(43772079-43772218)
chr4 (1-112)||(54150517-54150628)
chr4 (6-112)||(13167521-13167627)
chr4 (2-140)||(14564102-14564240)
chr4 (11-112)||(16566306-16566407)
chr4 (3-139)||(26651805-26651941)
chr4 (27-150)||(39187751-39187874)
chr4 (1-140)||(51922931-51923070)
chr4 (1-138)||(43781477-43781613)
chr4 (1-112)||(30842123-30842233)
chr4 (1-112)||(42944882-42944993)
chr4 (8-142)||(19592185-19592319)
chr4 (5-115)||(46926043-46926153)
chr4 (1-135)||(49136513-49136647)
chr4 (3-136)||(9889295-9889427)
chr4 (1-142)||(15603351-15603492)
chr4 (5-118)||(49519725-49519838)
chr4 (12-140)||(6505203-6505331)
chr4 (1-145)||(14072494-14072637)
chr4 (29-140)||(41866173-41866284)
chr4 (1-112)||(48407682-48407792)
chr4 (7-105)||(19599487-19599584)
chr4 (35-149)||(54488630-54488744)
chr4 (7-140)||(38306008-38306141)
chr4 (17-121)||(55638730-55638834)
chr4 (1-85)||(56241846-56241930)
chr4 (1-148)||(13182998-13183145)
chr4 (1-139)||(26426072-26426209)
chr4 (43-140)||(28987051-28987148)
chr4 (1-136)||(9893702-9893837)
chr4 (5-136)||(14076010-14076140)
chr4 (35-106)||(33574203-33574274)
chr4 (43-142)||(54153077-54153176)
chr4 (46-139)||(48908309-48908402)
chr4 (1-85)||(4954062-4954146)
chr4 (1-136)||(54735611-54735745)
chr4 (12-82)||(2175161-2175231)
chr4 (1-84)||(48550439-48550522)
chr4 (2-112)||(38263891-38264001)
chr4 (10-136)||(45779970-45780095)
chr4 (32-99)||(15619636-15619703)
chr4 (32-99)||(53914921-53914987)
chr4 (32-82)||(16492949-16492999)
chr4 (32-82)||(36150626-36150676)
chr4 (11-97)||(54487219-54487305)
chr4 (55-112)||(22694581-22694638)
chr4 (43-143)||(48556585-48556686)
chr4 (12-112)||(14054853-14054953)
chr4 (1-133)||(38694039-38694171)
chr4 (36-84)||(39993579-39993627)
chr4 (34-112)||(28947733-28947811)
chr4 (32-142)||(40286304-40286413)
chr4 (32-97)||(22699764-22699829)
chr4 (32-97)||(22980701-22980766)
chr4 (32-97)||(22994288-22994353)
chr4 (32-140)||(14597581-14597688)
chr4 (2-50)||(30887199-30887247)
chr4 (32-144)||(38740255-38740366)
chr4 (52-136)||(53532019-53532103)
chr4 (53-112)||(5835793-5835851)
chr4 (1-112)||(31520355-31520465)
chr4 (36-82)||(47384987-47385033)
chr4 (27-112)||(523167-523252)
chr4 (7-72)||(8754155-8754219)
[»] chr2 (54 HSPs)
chr2 (1-140)||(9988455-9988594)
chr2 (11-142)||(1944991-1945122)
chr2 (1-139)||(7472629-7472766)
chr2 (1-140)||(42089482-42089625)
chr2 (7-139)||(25747837-25747968)
chr2 (1-112)||(2213662-2213773)
chr2 (1-139)||(2213521-2213659)
chr2 (1-139)||(28127242-28127380)
chr2 (140-212)||(6479596-6479668)
chr2 (7-112)||(34433288-34433394)
chr2 (32-142)||(36548245-36548355)
chr2 (1-142)||(5916194-5916334)
chr2 (1-140)||(36312292-36312430)
chr2 (1-139)||(39141425-39141562)
chr2 (1-112)||(44619043-44619154)
chr2 (34-112)||(30007535-30007613)
chr2 (27-136)||(45714626-45714735)
chr2 (12-140)||(7296181-7296309)
chr2 (43-143)||(8170369-8170469)
chr2 (1-112)||(31224695-31224806)
chr2 (18-140)||(2215284-2215406)
chr2 (7-112)||(3853921-3854026)
chr2 (1-146)||(32502001-32502145)
chr2 (1-140)||(7295302-7295439)
chr2 (8-144)||(26207879-26208015)
chr2 (1-141)||(28261309-28261449)
chr2 (1-112)||(16467101-16467212)
chr2 (1-115)||(14821178-14821291)
chr2 (29-105)||(8041322-8041397)
chr2 (2-112)||(31562669-31562776)
chr2 (32-112)||(41580692-41580772)
chr2 (5-85)||(43436290-43436370)
chr2 (7-112)||(18511123-18511228)
chr2 (43-112)||(42515958-42516027)
chr2 (32-144)||(12110920-12111031)
chr2 (12-84)||(27911432-27911504)
chr2 (2-101)||(23358274-23358373)
chr2 (35-142)||(34997188-34997295)
chr2 (7-114)||(43858192-43858299)
chr2 (32-142)||(26806208-26806317)
chr2 (32-97)||(23359927-23359992)
chr2 (35-112)||(38600425-38600502)
chr2 (88-140)||(27911493-27911545)
chr2 (32-84)||(30599914-30599966)
chr2 (1-112)||(28641657-28641768)
chr2 (58-112)||(23267346-23267400)
chr2 (31-83)||(10918648-10918700)
chr2 (35-82)||(11759801-11759848)
chr2 (5-139)||(18970245-18970376)
chr2 (4-82)||(42770408-42770487)
chr2 (32-82)||(23377550-23377600)
chr2 (35-112)||(11240720-11240796)
chr2 (41-82)||(44148804-44148845)
chr2 (36-112)||(1763270-1763345)
[»] chr8 (60 HSPs)
chr8 (5-142)||(3467551-3467688)
chr8 (2-140)||(440145-440283)
chr8 (1-112)||(25697944-25698054)
chr8 (1-138)||(36113999-36114135)
chr8 (12-112)||(25497717-25497816)
chr8 (1-137)||(26243138-26243274)
chr8 (1-140)||(3097162-3097301)
chr8 (9-140)||(22936749-22936880)
chr8 (7-138)||(41289016-41289147)
chr8 (1-143)||(6399061-6399203)
chr8 (1-137)||(24897547-24897682)
chr8 (1-140)||(28425428-28425567)
chr8 (1-140)||(38114459-38114597)
chr8 (1-119)||(40742272-40742388)
chr8 (1-112)||(4941765-4941876)
chr8 (1-112)||(44926855-44926965)
chr8 (1-142)||(42143318-42143459)
chr8 (1-116)||(8124985-8125099)
chr8 (1-112)||(27649760-27649870)
chr8 (7-138)||(31246273-31246404)
chr8 (1-99)||(40742138-40742236)
chr8 (43-112)||(36121529-36121598)
chr8 (8-112)||(15206717-15206821)
chr8 (61-139)||(30085596-30085674)
chr8 (2-112)||(33627018-33627128)
chr8 (9-82)||(43550913-43550986)
chr8 (42-112)||(30759289-30759359)
chr8 (1-82)||(42149019-42149100)
chr8 (32-112)||(36779436-36779515)
chr8 (7-112)||(3619053-3619157)
chr8 (1-134)||(38152137-38152269)
chr8 (7-114)||(22552722-22552829)
chr8 (7-97)||(26490953-26491043)
chr8 (7-100)||(23018116-23018209)
chr8 (30-139)||(35550264-35550372)
chr8 (70-118)||(26125840-26125888)
chr8 (32-112)||(30081635-30081714)
chr8 (58-112)||(3465424-3465478)
chr8 (36-82)||(10552923-10552969)
chr8 (32-82)||(19649231-19649281)
chr8 (32-90)||(33588765-33588823)
chr8 (7-77)||(34342873-34342942)
chr8 (7-112)||(8702392-8702496)
chr8 (71-112)||(29023307-29023348)
chr8 (11-112)||(35615733-35615834)
chr8 (14-75)||(38335810-38335871)
chr8 (8-112)||(8130088-8130191)
chr8 (32-144)||(12124684-12124795)
chr8 (1-49)||(26125586-26125634)
chr8 (32-112)||(29970847-29970926)
chr8 (33-84)||(2071580-2071630)
chr8 (53-112)||(40792188-40792247)
chr8 (42-97)||(42600976-42601031)
chr8 (63-101)||(6876618-6876656)
chr8 (95-140)||(45147221-45147266)
chr8 (32-112)||(1836125-1836204)
chr8 (52-84)||(9695392-9695424)
chr8 (42-82)||(9908806-9908846)
chr8 (35-79)||(34957508-34957552)
chr8 (32-84)||(39219766-39219818)
[»] chr1 (52 HSPs)
chr1 (1-141)||(42850175-42850315)
chr1 (5-140)||(27801609-27801744)
chr1 (5-144)||(48510942-48511081)
chr1 (11-145)||(20800229-20800363)
chr1 (1-146)||(43728829-43728973)
chr1 (1-144)||(31223404-31223547)
chr1 (1-112)||(47123416-47123527)
chr1 (11-140)||(35569159-35569288)
chr1 (5-140)||(26058275-26058410)
chr1 (9-142)||(1199865-1199998)
chr1 (1-142)||(6166140-6166280)
chr1 (1-142)||(50406160-50406301)
chr1 (5-138)||(5410674-5410806)
chr1 (5-142)||(7826309-7826446)
chr1 (1-140)||(13056028-13056166)
chr1 (1-140)||(12247450-12247588)
chr1 (3-137)||(36205223-36205357)
chr1 (1-115)||(45710079-45710192)
chr1 (43-112)||(10470661-10470730)
chr1 (1-138)||(25230037-25230173)
chr1 (1-149)||(11023278-11023425)
chr1 (5-142)||(34718485-34718622)
chr1 (32-112)||(15884288-15884368)
chr1 (2-97)||(11561853-11561948)
chr1 (1-140)||(12468242-12468380)
chr1 (1-85)||(4369815-4369898)
chr1 (1-140)||(35536102-35536240)
chr1 (35-118)||(49242961-49243044)
chr1 (3-142)||(50977295-50977433)
chr1 (1-134)||(40229433-40229566)
chr1 (1-85)||(291729-291813)
chr1 (32-112)||(4347035-4347114)
chr1 (53-112)||(43134532-43134591)
chr1 (7-97)||(23628706-23628795)
chr1 (34-115)||(13344836-13344916)
chr1 (7-112)||(25061262-25061367)
chr1 (7-84)||(47085869-47085946)
chr1 (32-112)||(40352452-40352531)
chr1 (5-137)||(6061181-6061308)
chr1 (32-142)||(7765239-7765348)
chr1 (43-112)||(6464679-6464748)
chr1 (43-111)||(13931694-13931762)
chr1 (12-112)||(15576495-15576595)
chr1 (58-112)||(29441271-29441325)
chr1 (32-82)||(43730059-43730109)
chr1 (35-112)||(41989-42066)
chr1 (32-84)||(40709237-40709288)
chr1 (58-121)||(36447653-36447715)
chr1 (32-82)||(29759712-29759762)
chr1 (42-82)||(4192578-4192618)
chr1 (54-118)||(34661946-34662009)
chr1 (31-83)||(47978375-47978427)
[»] chr3 (55 HSPs)
chr3 (1-139)||(10853224-10853362)
chr3 (1-139)||(26519670-26519808)
chr3 (2-140)||(50664765-50664903)
chr3 (32-140)||(23496354-23496462)
chr3 (1-140)||(38172263-38172402)
chr3 (1-146)||(20813152-20813296)
chr3 (1-118)||(35930744-35930861)
chr3 (1-112)||(3348249-3348360)
chr3 (1-112)||(10334144-10334255)
chr3 (1-112)||(35425340-35425450)
chr3 (5-112)||(42475719-42475826)
chr3 (43-142)||(48189396-48189495)
chr3 (1-140)||(52966765-52966904)
chr3 (3-122)||(53074911-53075029)
chr3 (6-140)||(4984592-4984726)
chr3 (1-115)||(42318336-42318449)
chr3 (1-142)||(15511330-15511470)
chr3 (1-140)||(44224768-44224907)
chr3 (1-140)||(44939372-44939509)
chr3 (1-114)||(8424712-8424824)
chr3 (1-145)||(38125393-38125536)
chr3 (5-84)||(31084218-31084296)
chr3 (43-142)||(55154549-55154648)
chr3 (1-138)||(21224996-21225133)
chr3 (43-112)||(30811516-30811585)
chr3 (1-105)||(53179854-53179958)
chr3 (32-139)||(38340842-38340949)
chr3 (36-136)||(19877458-19877558)
chr3 (32-112)||(34561145-34561225)
chr3 (1-112)||(23207052-23207162)
chr3 (7-84)||(49526681-49526758)
chr3 (32-112)||(40415280-40415360)
chr3 (33-138)||(16246054-16246157)
chr3 (42-108)||(29716674-29716740)
chr3 (2-99)||(25848039-25848136)
chr3 (32-84)||(7012677-7012729)
chr3 (36-112)||(14651086-14651161)
chr3 (32-112)||(25181247-25181326)
chr3 (32-112)||(42644299-42644379)
chr3 (36-114)||(21023199-21023275)
chr3 (58-112)||(52813278-52813332)
chr3 (52-85)||(30301200-30301233)
chr3 (34-82)||(10852727-10852775)
chr3 (32-112)||(44225602-44225681)
chr3 (32-112)||(53567969-53568048)
chr3 (7-82)||(30809959-30810034)
chr3 (36-102)||(22737055-22737121)
chr3 (34-84)||(23918881-23918931)
chr3 (43-84)||(30736172-30736213)
chr3 (29-82)||(32523276-32523329)
chr3 (33-70)||(38626750-38626787)
chr3 (35-83)||(29252138-29252186)
chr3 (88-140)||(31618368-31618420)
chr3 (1-53)||(31618930-31618982)
chr3 (32-112)||(52736801-52736880)
[»] scaffold0005 (2 HSPs)
scaffold0005 (2-140)||(253135-253273)
scaffold0005 (32-140)||(219690-219797)
[»] scaffold0369 (1 HSPs)
scaffold0369 (1-142)||(8455-8596)
[»] scaffold0381 (1 HSPs)
scaffold0381 (3-136)||(9119-9251)
[»] scaffold0217 (1 HSPs)
scaffold0217 (12-140)||(1983-2111)
[»] scaffold0007 (1 HSPs)
scaffold0007 (43-139)||(29080-29176)
[»] scaffold0394 (1 HSPs)
scaffold0394 (39-112)||(5814-5887)
[»] scaffold0014 (1 HSPs)
scaffold0014 (5-112)||(118394-118501)
[»] scaffold0983 (1 HSPs)
scaffold0983 (15-112)||(2252-2349)
[»] scaffold0172 (1 HSPs)
scaffold0172 (32-112)||(15242-15321)
[»] scaffold0031 (2 HSPs)
scaffold0031 (27-82)||(99694-99749)
scaffold0031 (35-82)||(99918-99965)
[»] scaffold0020 (1 HSPs)
scaffold0020 (7-116)||(138488-138597)
[»] scaffold0009 (1 HSPs)
scaffold0009 (34-84)||(199381-199431)
[»] scaffold0041 (1 HSPs)
scaffold0041 (55-144)||(46822-46911)
[»] scaffold0015 (1 HSPs)
scaffold0015 (32-112)||(65537-65616)


Alignment Details
Target: chr6 (Bit Score: 94; Significance: 5e-46; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 10826097 - 10826246
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||  |||||||||| ||    
T  10826097 caactcataagaatcacttttaaataagtatatccaaacaaaaatcaattcaaattcaactcacttttaaccaaaatcaattctctcaaactcaatttta 10826196  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacacttaatcaattt 150  Q
    ||||||| |||| |||||||||  ||||||||||||||| ||||| ||||    
T  10826197 tcaaaattaattctcaccgccgccaaaccaaacacacacctaatctattt 10826246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 33899099 - 33898961
Alignment:
Q  2 aactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctat 101  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||  ||||||||||||||||||||||||||||  ||||||||||||||    
T  33899099 aactcataagaatcacttttacattagtgtatccaaacataaatcaattcatatcaaactcacttttaatcaaaatcaattctctcaaactcaattctat 33899000  T
Q  102 caaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    ||||||||||| ||||| |||  | ||||||||||||||    
T  33898999 caaaatcaattctcaccaccgctataccaaacacacact 33898961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 21254967 - 21254835
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaa 106  Q
    |||||||||| |||||  ||| || ||||||||| ||||||||| |||||||||||||||||||||||| |||||||||  ||||||||||||||||||     
T  21254967 ataagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactcacttttaatcaaattcaattctctcaaactcaattctatcaaac 21254869  T
Q  107 tcaattatcaccgccgtgaaaccaaacacacact 140  Q
    |||||||||||| ||||| |||||||||||||||    
T  21254868 tcaattatcaccaccgtggaaccaaacacacact 21254835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 6208157 - 6208017
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||    |||| ||||||||| || ||||||||||||||||||||||||||||||||||||||| |  ||| |||||||||    
T  6208157 caactcataagaatcacttttagtaaagtgtatccaaacataa-tcaattcacattcaactcacttttaatcaaaatcaattcactcaaaatcaattcta 6208059  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    ||||||||||||||| || |||  | ||||||||||||||||    
T  6208058 tcaaaatcaattatcgccaccgctataccaaacacacactta 6208017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 13739212 - 13739354
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||||  |||| ||||||||| || ||||||||| |  ||||||||||||| ||||||||||||||  |||||||||||||    
T  13739212 caactcataagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattcta 13739310  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacacttaat 144  Q
    |||||||||||| || || |||  | ||||||||||||||||||    
T  13739311 tcaaaatcaattctcgccaccgccataccaaacacacacttaat 13739354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 13744712 - 13744854
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||||  |||| ||||||||| || ||||||||| |  ||||||||||||| ||||||||||||||  |||||||||||||    
T  13744712 caactcataagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattcta 13744810  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacacttaat 144  Q
    |||||||||||| || || |||  | ||||||||||||||||||    
T  13744811 tcaaaatcaattctcgccaccgccataccaaacacacacttaat 13744854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 29409346 - 29409207
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||||| |||||||  | || ||||||||| ||||||||||||||  |||||||||||||||||||||||||||   |||||||||||||    
T  29409346 caactcataagaatcatttttaaaaaactgtatccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaattctttcaaactcaattcta 29409247  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    | |||||||||| || || |||| | |||||| |||||||    
T  29409246 ttaaaatcaattttcgccaccgtcataccaaaaacacact 29409207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 17830058 - 17829982
Alignment:
Q  36 aaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||    
T  17830058 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 17829982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 53 - 149
Target Start/End: Complemental strand, 32599505 - 32599409
Alignment:
Q  53 cattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaacacacacttaatcaatt 149  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||   || ||| |||||||||||||||| ||||    
T  32599505 cattcaactcacttttaatcaaaatcaattctcttaaattcaattctatcaaaatcaattctcaccaatgtcaaatcaaacacacacttaattaatt 32599409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 16442445 - 16442347
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattct 99  Q
    ||||||||| ||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||| |||  |||||||||||||  ||| ||||||||    
T  16442445 caactcatatgaatcacttttaaataagtgtatccaaacataaatcaattcacattcaactcacttgtaactaaaatcaattctctcaaaatcaattct 16442347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 32 - 144
Target Start/End: Complemental strand, 1312503 - 1312391
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaa 131  Q
    |||| |||| |||||||||| |||||||||||||||||| ||||||||||| |   |||||| |||||||||||||||||| || || |||   ||||||    
T  1312503 atccgaacataaatcaattcgcattcaactcacttttaaccaaaatcaattttatcaaactcgattctatcaaaatcaattttctccaccgctgaaccaa 1312404  T
Q  132 acacacacttaat 144  Q
    |||||||||||||    
T  1312403 acacacacttaat 1312391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 16548155 - 16548230
Alignment:
Q  11 gaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcc 86  Q
    |||||||||||||   |||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  16548155 gaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctcc 16548230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 31132470 - 31132583
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||| |||||||||||||||||||| |||| ||||||| || ||  |||| |||| ||||||| |||||  |||||| |||| ||  |||||||||||||    
T  31132470 caacccataagaatcacttttaaataagtgtatccaaa-aataacgaattaacatccaactcatttttagccaaaataaattatctcaaactcaattcta 31132568  T
Q  101 tcaaaatcaattatc 115  Q
    |||||||||||||||    
T  31132569 tcaaaatcaattatc 31132583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 5584112 - 5584033
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||   ||| |||||||||||||||||||||    
T  5584112 atccaaacataaatcaatt-acattaaactcacttttagtcaaaatcaattctgtcaaaatcaattctatcaaaatcaatt 5584033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 699564 - 699673
Alignment:
Q  2 aactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctat 101  Q
    |||| |||||||| |||||||    |||||||||||||| ||||||||||  || ||||||||||| | | ||||||||||||   ||||||||||||||    
T  699564 aacttataagaattacttttagtaaagtgcatccaaacataaatcaattcttatccaactcactttaact-aaaatcaattctttcaaactcaattctat 699662  T
Q  102 caaaatcaatt 112  Q
    |||||||||||    
T  699663 caaaatcaatt 699673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 29399850 - 29399750
Alignment:
Q  38 acaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaacacac 137  Q
    |||||||||||||| ||||||||| ||| || | |||||||||||||   ||||||||||||||||||||||||| || || |||  |||||||||| ||    
T  29399850 acaaaaatcaattc-cattcaacttactctttaccaaaatcaattctatcaaactcaattctatcaaaatcaattctctccaccgccaaaccaaacatac 29399752  T
Q  138 ac 139  Q
    ||    
T  29399751 ac 29399750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 3605814 - 3605736
Alignment:
Q  33 tccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    |||||||| |||||| ||  || ||||||||||||||||||||||||||||| | ||| |||||| ||||||||||||||    
T  3605814 tccaaacataaatcacttttcactcaactcacttttaatcaaaatcaattctac-aaaatcaattatatcaaaatcaatt 3605736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 16122062 - 16121983
Alignment:
Q  35 caaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattat 114  Q
    |||||| ||||||| | ||| |||| |||||||||| |||||||||||||   ||| |||||| ||||||||||||||||    
T  16122062 caaacacaaatcaacttacactcaaatcacttttaaccaaaatcaattctatcaaaatcaattttatcaaaatcaattat 16121983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 112
Target Start/End: Complemental strand, 15151543 - 15151489
Alignment:
Q  58 aactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| ||| |||||||||||| |  |||||||||||||||||||||||||    
T  15151543 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 15151489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 21455889 - 21455997
Alignment:
Q  2 aactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctat 101  Q
    ||||||| |||||||||||||| | |||| || |||||| || | | ||||||| ||||| ||||||||  ||||||||||||   |||||||||| |||    
T  21455889 aactcatgagaatcacttttaa-taagtgtatacaaacacaattga-ttcacatccaacttacttttaactaaaatcaattcttacaaactcaattatat 21455986  T
Q  102 caaaatcaatt 112  Q
    |||||||||||    
T  21455987 caaaatcaatt 21455997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 26274671 - 26274611
Alignment:
Q  52 acattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    |||||||||||||||||| ||| |||||||| |   ||| |||||||||||||||||||||    
T  26274671 acattcaactcacttttagtcagaatcaattatgtcaaaatcaattctatcaaaatcaatt 26274611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 25208723 - 25208769
Alignment:
Q  36 aaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||| |||||| || |||||||||||||||||||| ||||||||||    
T  25208723 aaacataaatcattttacattcaactcacttttaattaaaatcaatt 25208769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 29240447 - 29240407
Alignment:
Q  29 tgcatccaaacaaaaatcaattcacattcaactcactttta 69  Q
    |||||||||||| |||| |||| ||||||||||||||||||    
T  29240447 tgcatccaaacataaatgaatttacattcaactcactttta 29240407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 29682204 - 29682256
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    ||||||||| ||||||||| |||  ||||||| |||||| |||||||||||||    
T  29682204 atccaaacacaaatcaatttacacgcaactcaattttaaccaaaatcaattct 29682256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 3e-44; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 48459741 - 48459879
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    ||||||||||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  48459741 tcataagaatcacttttaagtaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaa 48459840  T
Q  105 aatcaattatcaccgccgtgaaaccaaacacacacttaa 143  Q
    |||||||| |||||  ||| | |||||||||||||||||    
T  48459841 aatcaattctcaccaacgtcataccaaacacacacttaa 48459879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 37562597 - 37562736
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||| ||||||||||||||| |||| ||||||||| |||||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||||    
T  37562597 caactcatatgaatcacttttaaataagtgtatccaaacataaatcaattcacatccaactcacttttaacaaaaatcaattctcttaaactcaattcta 37562696  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    |||||||||||| || || |||  ||||||||||||||||    
T  37562697 tcaaaatcaattctccccaccgccaaaccaaacacacact 37562736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 47217612 - 47217487
Alignment:
Q  12 aatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaat 111  Q
    ||||||||||||   |||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  47217612 aatcacttttaagcgagtgcatccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaat 47217513  T
Q  112 tatcaccgccgtgaaaccaaacacac 137  Q
    | |||||||||   ||||||||||||    
T  47217512 tttcaccgccgccgaaccaaacacac 47217487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 3622542 - 3622431
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||| |||||||||||||||| | |||| ||||||||| |||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||    
T  3622542 caactcgtaagaatcacttttaagtaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattcta 3622443  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  3622442 tcaaaatcaatt 3622431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 32186971 - 32187110
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    ||||| |||| |||||||||| |||||||||||||| ||||||||| ||||  |||||||||||||||||||||||||||| |||| | |||||||||||    
T  32186971 tcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaattaattctatcaa 32187070  T
Q  105 aatcaattatcaccgccgtgaaaccaaacacacacttaat 144  Q
    |||||||| || || |||| | |||||||| |||||||||    
T  32187071 aatcaattctcgccaccgtcataccaaacatacacttaat 32187110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 41715688 - 41715822
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    ||||| |||| |||||||||| |||||||||||||| ||||||||| ||||  |||||||||||||||||||||||||||| |||| |||||||||||||    
T  41715688 tcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaattctatcaa 41715787  T
Q  105 aatcaattatcaccgccgtgaaaccaaacacacac 139  Q
    |||||||| || || |||  | |||||||||||||    
T  41715788 aatcaattctcgccaccgccataccaaacacacac 41715822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 43738019 - 43737882
Alignment:
Q  3 actcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatc 102  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||||||| ||  |||| ||||||||||||||||||||||| ||||||||||| | |     
T  43738019 actcataagaatcacttttaaataagtttatccaaacaaaaatcaattcatatctaactaacttttaatcaaaatcaattctcttaaactcaattatgtt 43737920  T
Q  103 aaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    |||||||||| |||||| ||  | || |||||||||||    
T  43737919 aaaatcaattctcaccgtcgccatactaaacacacact 43737882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 37639489 - 37639596
Alignment:
Q  33 tccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaa 132  Q
    |||||||| |||||||||||||||||| |||||||||| ||||||||||||||  ||||||||||||||||||||||||| || ||||||  | ||||||    
T  37639489 tccaaacataaatcaattcacattcaattcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccccgccgccataccaaa 37639588  T
Q  133 cacacact 140  Q
    ||||||||    
T  37639589 cacacact 37639596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 38230105 - 38230232
Alignment:
Q  11 gaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaa 110  Q
    |||||||||||||   | || ||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||    
T  38230105 gaatcacttttaataaaatgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctcttaaattcaattctatcaaaatcaa 38230204  T
Q  111 ttatcaccgccgtgaaaccaaacacaca 138  Q
    || || | ||||  | ||||||||||||    
T  38230205 ttctctcggccgccataccaaacacaca 38230232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 10372007 - 10371901
Alignment:
Q  34 ccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaac 133  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| || || ||||   |||||||    
T  10372007 ccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgttttaccaaac 10371908  T
Q  134 acacact 140  Q
    |||||||    
T  10371907 acacact 10371901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 3375519 - 3375628
Alignment:
Q  3 actcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatc 102  Q
    ||||||||||||||||||||| | |||| ||||||||| |||||||||||||   ||||||||||||| |||||| |||||||  |||||||||||||||    
T  3375519 actcataagaatcacttttaagtgagtgtatccaaacacaaatcaattcacaccaaactcacttttaaccaaaattaattctctcaaactcaattctatc 3375618  T
Q  103 aaaatcaatt 112  Q
    ||||||||||    
T  3375619 aaaatcaatt 3375628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 44967481 - 44967337
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||| ||    |||| || |||||| ||||||||||||||||||||||||||||| ||||||||||||||  |||||||||| ||    
T  44967481 caactcataagaatcacttctattaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattata 44967382  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacacttaatc 145  Q
    |||||||||||| || |  |||| | ||||||| || ||||||||    
T  44967381 tcaaaatcaattctcgctaccgtcataccaaacccatacttaatc 44967337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 3342817 - 3342955
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||| ||    |||| ||||||||| ||||||||||| || ||||||||||||||  |||||||||||||  |||||||||||||    
T  3342817 caactcataagaatcacttctattaaagtgtatccaaacataaatcaattcatatccaactcacttttaactaaaatcaattctctcaaactcaattcta 3342916  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacac 139  Q
    ||||||| |||| || || |||  |||||||||||||||    
T  3342917 tcaaaattaattctccccaccgccaaaccaaacacacac 3342955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 137
Target Start/End: Original strand, 47021972 - 47022082
Alignment:
Q  27 agtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaa 126  Q
    |||| ||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||||||| || || | |     
T  47021972 agtgtatccaaacataaatcaattcactttcaacttacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattatccccaccatcat 47022071  T
Q  127 accaaacacac 137  Q
    |||||||||||    
T  47022072 accaaacacac 47022082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 386559 - 386428
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    |||||||||||||||||   |||||  ||||||||| ||||||||||||||||| || |||||||| |||||||||| |||  |||||||||| ||||||    
T  386559 tcataagaatcacttttcggttagtatatccaaacataaatcaattcacattcagctaacttttaaccaaaatcaatactctcaaactcaattatatcaa 386460  T
Q  105 aatcaattatcaccgccgtgaaaccaaacaca 136  Q
    |||||||| | ||| |||  ||||||||||||    
T  386459 aatcaattttaaccaccgccaaaccaaacaca 386428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 35 - 142
Target Start/End: Original strand, 46541661 - 46541768
Alignment:
Q  35 caaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaaca 134  Q
    |||||| ||| ||||||||||||||||||||| ||| ||||||||||||||  ||||||||||||||||||||||||| | ||| |||  ||||||||||    
T  46541661 caaacataaaccaattcacattcaactcacttctaaccaaaatcaattctctcaaactcaattctatcaaaatcaattttaaccaccgccaaaccaaaca 46541760  T
Q  135 cacactta 142  Q
    || |||||    
T  46541761 catactta 46541768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 12632165 - 12632031
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||||||||||||   ||| ||  |||||| ||||||||||||||  ||||||||||||| ||||||| ||||||  ||||  |||||||    
T  12632165 caactcataagaatcacttttaagcgagtacactcaaacataaatcaattcacatctaactcacttttaaccaaaatctattctctcaaacaaaattcta 12632066  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacac 135  Q
    |||||||||||| || || ||| ||||||||||||    
T  12632065 tcaaaatcaattctctccaccgcgaaaccaaacac 12632031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 34010367 - 34010507
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||| ||||||||||| |||| || |||||| || ||| |||| || |||||||||||||| |||||||||||||   |||||||||||||    
T  34010367 caactcataagaaccacttttaaatgagtgtattcaaacataa-tcagttcatatccaactcacttttaaccaaaatcaattctttcaaactcaattcta 34010465  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacacttaa 143  Q
    |||||||||||| || || |||   ||||||||||||||||||    
T  34010466 tcaaaatcaattctcgccaccg-ccaaccaaacacacacttaa 34010507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 34011043 - 34010908
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaa-ctcacttttaatcaaaatcaattctcctaaactcaattct 99  Q
    ||||||||||||||||||||||| | | ||  |||||||| |||| |||| ||| |||| |||||||| || ||||||||||| ||  ||||||||||||    
T  34011043 caactcataagaatcacttttaagtgaatgtttccaaacataaattaatttacactcaaactcacttt-aaccaaaatcaattttctcaaactcaattct 34010945  T
Q  100 atcaaaatcaattatcaccgccgtgaaaccaaacaca 136  Q
    ||||||||||||||||||||| |  ||||||||||||    
T  34010944 atcaaaatcaattatcaccgctgccaaaccaaacaca 34010908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 42752242 - 42752134
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaa 131  Q
    ||||||||| |||||||||||||||||||||||||||||  ||||||||||||   ||| |||||||| ||||||||||||||| || |||   ||||||    
T  42752242 atccaaacataaatcaattcacattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaattatctccaccgcagaaccaa 42752143  T
Q  132 acacacact 140  Q
    |||||||||    
T  42752142 acacacact 42752134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 43631777 - 43631642
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||| ||||||||||||||| | ||   ||||||||| || |||||||| ||  ||||||||||||| ||||||||||||||  |||||||||||||    
T  43631777 caactcaaaagaatcacttttaattaagcatatccaaacataa-tcaattcatatctaactcacttttaaccaaaatcaattctctcaaactcaattcta 43631679  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacac 137  Q
    ||||||||||||||| || |||  | |||||||||||    
T  43631678 tcaaaatcaattatccccaccgccataccaaacacac 43631642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 9456132 - 9456247
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||||  |||| ||||||||| || |||||| || |  ||||||||||||| ||||||||||||||   |||| |||||||    
T  9456132 caactcataagaatcacttttaaacaagtgtatccaaacataa-tcaatttacctcaaactcacttttaaccaaaatcaattctctcgaacttaattcta 9456230  T
Q  101 tcaaaatcaattatcac 117  Q
    |||||||||||| ||||    
T  9456231 tcaaaatcaattctcac 9456247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 39391215 - 39391083
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    ||||||||||||||| |||   |||| ||||||||| |||||||||||| |  ||||||||||||| |||||||||||||   ||| |||||||||||||    
T  39391215 tcataagaatcacttgtaagaaagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctaaaaaaatcaattctatcaa 39391116  T
Q  105 aatcaattatcaccgccgtgaaaccaaacacac 137  Q
    |||||||| || || |||  | |||||||||||    
T  39391115 aatcaattttcgccaccgccataccaaacacac 39391083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 32205953 - 32206035
Alignment:
Q  2 aactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    |||||||||||||||||||||| | |||| ||||||||| ||||||||||||||  ||| |||||||||| ||||||||||||    
T  32205953 aactcataagaatcacttttaagtaagtgtatccaaacataaatcaattcacatcaaacccacttttaattaaaatcaattct 32206035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 42740419 - 42740521
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||| |||||||||||||||||| | |||  ||| ||||| ||||||||| |||||||||| |||||||| ||||||||||||||  |||||||||| ||    
T  42740419 caacacataagaatcacttttaagtaagtatatctaaacataaatcaattaacattcaacttacttttaaccaaaatcaattctctcaaactcaattata 42740518  T
Q  101 tca 103  Q
    |||    
T  42740519 tca 42740521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 42904584 - 42904686
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    ||||||||||||||||||||  |||| ||| ||||| ||||||||||||||  |||||| |||||  ||||| ||||||||  |||||||||||||||||    
T  42904584 tcataagaatcacttttaaacgagtgtatcaaaacataaatcaattcacatctaactcatttttatccaaaaacaattctctcaaactcaattctatcaa 42904683  T
Q  105 aat 107  Q
    |||    
T  42904684 aat 42904686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 3750739 - 3750820
Alignment:
Q  27 agtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatc 108  Q
    |||| ||||||||| |||||||||||||| |||||||||||||| ||||||||||||||  |||||||||| ||| ||||||    
T  3750739 agtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattttattaaaatc 3750820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 39634216 - 39634108
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaa 131  Q
    ||||||||| ||||||||||| ||||||||||||||||| |||||||||||||   ||| |||||||| || ||||||||| || || |||   ||||||    
T  39634216 atccaaacataaatcaattcatattcaactcacttttaaccaaaatcaattctaacaaaatcaattctgtccaaatcaattctctccaccgcagaaccaa 39634117  T
Q  132 acacacact 140  Q
    |||||||||    
T  39634116 acacacact 39634108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 19097483 - 19097562
Alignment:
Q  60 ctcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaacacacac 139  Q
    |||||||||||||||||||||||||   |||||||||||||||||||| |||| |||||||||  | |||||||||||||    
T  19097483 ctcacttttaatcaaaatcaattctttcaaactcaattctatcaaaattaattctcaccgccgccataccaaacacacac 19097562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 33746422 - 33746497
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    |||||||||||  |||| ||| || | ||||||||||||||||| | |||||||||||||||||||||||||||||    
T  33746422 ataagaatcacggttaagttaatgtaaccaaacaaaaatcaatttatattcaactcacttttaatcaaaatcaatt 33746497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 34366063 - 34365953
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||| |||||||||||| | || | ||||||||| |||||||||||||  ||||| ||||||||  ||||||||||||   |||||| ||| ||    
T  34366063 caactcataaaaatcacttttaa-taagcgtatccaaacataaatcaattcacacccaactaacttttaactaaaatcaattctttcaaactccattata 34365965  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  34365964 tcaaaatcaatt 34365953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 20088929 - 20089007
Alignment:
Q  34 ccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||| |||||| || || |||||||||||||||| ||||||||||| | || || |||||||||||||||||||||    
T  20088929 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaattatacttaaatcaattctatcaaaatcaatt 20089007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 12964659 - 12964736
Alignment:
Q  35 caaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    |||||| ||||||||  ||||||||||||||| |||  |||||||||| ||  |||||||||||||||||||||||||    
T  12964659 caaacataaatcaatctacattcaactcacttataacgaaaatcaattatctcaaactcaattctatcaaaatcaatt 12964736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 24770952 - 24770852
Alignment:
Q  42 aaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaacacacactt 141  Q
    ||||||||| |||| |||||||||||||| ||||||||||| ||  ||||| |||||||||||||| |||| ||  | |||| | ||||||| |||||||    
T  24770952 aaatcaatttacatccaactcacttttaaccaaaatcaattatctcaaacttaattctatcaaaattaattctcgtcaccgtcataccaaacgcacactt 24770853  T
Q  142 a 142  Q
    |    
T  24770852 a 24770852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 39977610 - 39977718
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaa 131  Q
    ||||||| | ||||||||||| ||  ||||||||||| |  ||||||||||||   ||||| |||||||||||||||||||||| || |||  | |||||    
T  39977610 atccaaaaataaatcaattcatatcaaactcacttttgactaaaatcaattctttcaaactaaattctatcaaaatcaattatcgccaccgccataccaa 39977709  T
Q  132 acacacact 140  Q
    |||||||||    
T  39977710 acacacact 39977718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 36920260 - 36920141
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||| ||||||||| ||||| | |  | || |||||| ||||||||| | ||  ||||||||||||| |||||||||||||   |||||||||| ||    
T  36920260 caactcaaaagaatcacctttaattaaacgtattcaaacataaatcaatttatatctaactcacttttaaccaaaatcaattctttcaaactcaatttta 36920161  T
Q  101 tcaaaatcaattatcaccgc 120  Q
    ||||||| |||| |||||||    
T  36920160 tcaaaattaattctcaccgc 36920141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 4228605 - 4228686
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattat 114  Q
    ||||||||| |||||| ||  |||||||||||||||||||||||||||||| |  |||| ||||||| | |||||||||||||    
T  4228605 atccaaacataaatcacttttcattcaactcacttttaatcaaaatcaattat-gtaaaatcaattcaaccaaaatcaattat 4228686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 1766458 - 1766533
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||||||||||||||  |||  | ||||||| | ||||||||| |  ||||||||||||||||||||||||||||    
T  1766458 ataagaatcacttttatgttaaggtatccaaatataaatcaatttaggttcaactcacttttaatcaaaatcaatt 1766533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 48134607 - 48134717
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||| |||| |||||||||||||  |||  ||||||||| || ||||||| | |  ||| |||||||||  |||||||||||||  |||||||||||||    
T  48134607 caacttataaaaatcacttttaaacaagtttatccaaacataa-tcaattctcctcaaacccacttttaacaaaaatcaattctctcaaactcaattcta 48134705  T
Q  101 tcaaaatcaatt 112  Q
    ||||||| ||||    
T  48134706 tcaaaattaatt 48134717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 37008432 - 37008294
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||| |||   ||||  |||||||| |||||||| ||| |  ||||||||||||| ||||||||||||    ||| |||||||||    
T  37008432 caactcataagaatcacttataagaaagtgtctccaaacataaatcaat-cacctcaaactcacttttaaccaaaatcaattccaacaaaatcaattcta 37008334  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    | ||||||| || || || ||  || ||||||||||||||||    
T  37008333 taaaaatcagttttcgccacc--gataccaaacacacactta 37008294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 16079459 - 16079524
Alignment:
Q  31 catccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaat 96  Q
    |||||||||| |||||| ||  ||||||||||||||| || ||||||||||||| ||||| |||||    
T  16079459 catccaaacataaatcacttttcattcaactcactttaaaccaaaatcaattctactaaaatcaat 16079524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 38494276 - 38494325
Alignment:
Q  34 ccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattc 83  Q
    ||||||| ||| || |||||||||||||||||||||| ||||||||||||    
T  38494276 ccaaacataaaccacttcacattcaactcacttttaaccaaaatcaattc 38494325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 112
Target Start/End: Original strand, 2839326 - 2839428
Alignment:
Q  9 aagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatc 108  Q
    ||||||||||||| | ||| || ||||||||| ||||||||| |  |||||||||||||| || |||||| |||||   ||| ||||||| |||| ||||    
T  2839326 aagaatcacttttgacttaatgaatccaaacataaatcaattta-gttcaactcacttttcataaaaatctattctatcaaaatcaattcaatcataatc 2839424  T
Q  109 aatt 112  Q
    ||||    
T  2839425 aatt 2839428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 37148661 - 37148611
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||||||| |||||| ||  ||||||||||| ||||||||||||||||||    
T  37148661 atccaaacagaaatcatttttcattcaactcatttttaatcaaaatcaatt 37148611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 41625564 - 41625514
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||||||| |||| |||| ||| |||| ||||||||||||||||||||||    
T  41625564 atccaaacacaaattaatttacactcaagtcacttttaatcaaaatcaatt 41625514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 40903196 - 40903107
Alignment:
Q  55 ttcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaacacacacttaat 144  Q
    |||||||||||||||  |||||||||||||   ||| |||||| | |||||||||||| || || | |  ||||||||||||||| ||||    
T  40903196 ttcaactcacttttaggcaaaatcaattctatcaaaatcaattatgtcaaaatcaattttcgccactggaaaaccaaacacacacctaat 40903107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 45557440 - 45557509
Alignment:
Q  14 tcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattc 83  Q
    ||||||||| || | || ||||||||| |||||| || || ||||||||||||||| ||| |||||||||    
T  45557440 tcacttttacatgaatgtatccaaacacaaatcactttaccttcaactcacttttagtcagaatcaattc 45557509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 40491653 - 40491721
Alignment:
Q  14 tcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||||||| || | || ||||||| | |||||| || || ||||||||||||||| ||||||||||||    
T  40491653 tcacttttacatgaatgtatccaaaaataaatcactttaccttcaactcacttttagtcaaaatcaatt 40491721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 39988059 - 39987918
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||||| |||| ||||||||| |||||||||||| |  ||||||||||||| ||||||||||||||  |||||||||||||    
T  39988059 caactcataagaatcacttttaaataagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattcta 39987960  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    |||||||||||| |||||||||  | ||||||||||||||||    
T  39987959 tcaaaatcaattctcaccgccggtataccaaacacacactta 39987918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 8049143 - 8049004
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||||| |||| ||||||||| ||||||||| || |  ||||||||||||| ||||||||||||||  |||||||||||||    
T  8049143 caactcataagaatcacttttaaataagtgtatccaaacataaatcaattaacctcaaactcacttttaaccaaaatcaattctctcaaactcaattcta 8049044  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    |||||||||||| |||||||||  | |||||| |||||||    
T  8049043 tcaaaatcaattctcaccgccgctataccaaagacacact 8049004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 40885230 - 40885375
Alignment:
Q  1 caactcataagaa-tcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattct 99  Q
    |||||||||| || |||||||||||  ||||  |||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  40885230 caactcataaaaactcacttttaaacaagtgtgtccaaacataaatcaattcacatccaactcacttttaatcaaaatcaattctcttaaactcaattct 40885329  T
Q  100 atcaaaatcaattatcaccgccgtgaaaccaaacacacacttaatc 145  Q
    | ||||||||||| ||||| |||  | |||||||||||||| ||||    
T  40885330 aacaaaatcaattttcaccaccgccataccaaacacacactaaatc 40885375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 13253174 - 13253038
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||||| |||| ||||||||| || |||||||| ||||||||||||||||| |||||||||||||   |||||||||||||    
T  13253174 caactcataagaatcacttttaaatgagtgtatccaaacataa-tcaattcatattcaactcacttttaaccaaaatcaattctttcaaactcaattcta 13253076  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacaca 138  Q
    |||||||||||| || || |||   |||||||||||||    
T  13253075 tcaaaatcaattctcgccaccgcccaaccaaacacaca 13253038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 22482219 - 22482348
Alignment:
Q  11 gaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaa 110  Q
    |||||||||||||   |||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  ||| |||||||||||||||||||    
T  22482219 gaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaa 22482318  T
Q  111 ttatcaccgccgtgaaaccaaacacacact 140  Q
    || || ||||||  | ||||||||||||||    
T  22482319 ttctccccgccgccataccaaacacacact 22482348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 3667874 - 3667985
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||| |||| |||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||||||  |||||||||||||    
T  3667874 caactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttaacaaaatcaattctctcaaactcaattcta 3667973  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  3667974 tcaaaatcaatt 3667985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 35760209 - 35760348
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||| |||| ||||| |||||| | |||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||||||  |||||||||||||    
T  35760209 caactaataaaaatcagttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaattcta 35760308  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    |||||||||||| || || |||  | ||||||||||||||    
T  35760309 tcaaaatcaattctccccaccgctataccaaacacacact 35760348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 16158550 - 16158416
Alignment:
Q  8 taagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaat 107  Q
    |||||||||||||||||  |||||||||||| | |||| |||||||||  |||||||||||||||||||||||||||   |||||||| ||||| |||||    
T  16158550 taagaatcacttttaaaaaagtgcatccaaatataaattaattcacatcaaactcacttttaatcaaaatcaattctttcaaactcaaatctataaaaat 16158451  T
Q  108 caattatcaccgccgtgaaaccaaacacacactta 142  Q
    |||||||  | ||||| ||||||||||||||||||    
T  16158450 caattatggctgccgtcaaaccaaacacacactta 16158416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 7386024 - 7385885
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||||| |||| ||  ||||| |||||||||||| |  ||| ||||||||| ||||||||||||||  ||||| |||||||    
T  7386024 caactcataagaatcacttttaaataagtgtatttaaacataaatcaattcacctcaaacccacttttaaccaaaatcaattctctaaaacttaattcta 7385925  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    |||||||||||| |||||||||  | || |||||||||||    
T  7385924 tcaaaatcaattctcaccgccgctatactaaacacacact 7385885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 40791161 - 40791023
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||| ||||||||||||||| | || | ||||||||| || |||||||| ||  ||||||||||||| ||||||||||| ||  |||||||||||||    
T  40791161 caactcaaaagaatcacttttaattaagcgtatccaaacataa-tcaattcatatctaactcacttttaaccaaaatcaattttctcaaactcaattcta 40791063  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    |||||||||||| || ||||||||| ||||||||||||||    
T  40791062 tcaaaatcaattctccccgccgtgataccaaacacacact 40791023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 9275576 - 9275439
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||||| |||||    |||| ||||||||| ||||||||| ||||  ||||||||||||| |||||||||||||| ||||||||||| ||    
T  9275576 caactcataagaatcaattttattaaagtgtatccaaacataaatcaattaacatctaactcacttttaaccaaaatcaattctcttaaactcaatttta 9275477  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacaca 138  Q
    |||||||||||| || || |||  ||||||||||||||    
T  9275476 tcaaaatcaattttccccaccgccaaaccaaacacaca 9275439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 42146328 - 42146468
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||| ||||||||||||||| | || | ||||||||| || |||||||| ||  ||||||||||||| ||||||||||| ||  |||||||||||||    
T  42146328 caactcaaaagaatcacttttaattaagcgtatccaaacataa-tcaattcatatctaactcacttttaaccaaaatcaattttctcaaactcaattcta 42146426  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    |||||||||||| || ||||||| | ||||||||||||||||    
T  42146427 tcaaaatcaattctccccgccgtcataccaaacacacactta 42146468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 112
Target Start/End: Original strand, 4292177 - 4292280
Alignment:
Q  9 aagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatc 108  Q
    ||||||||||| ||| | |||| ||||||||| |||||||||||||||||||| | |||||||||||||||||||||  ||||| |||||||||||||||    
T  4292177 aagaatcacttctaattaagtgtatccaaacataaatcaattcacattcaacttatttttaatcaaaatcaattctctcaaacttaattctatcaaaatc 4292276  T
Q  109 aatt 112  Q
    ||||    
T  4292277 aatt 4292280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 40495450 - 40495311
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||| |||||||||||||  |||| ||||||||| ||||||||| ||||  ||||||||||||| ||||||||||| |   |||||||||||||    
T  40495450 caactcataaaaatcacttttaaaaaagtgtatccaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattatatcaaactcaattcta 40495351  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    |||||||||||| |  ||||||  | ||||||||||||||    
T  40495350 tcaaaatcaattcttcccgccgccataccaaacacacact 40495311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 32030739 - 32030845
Alignment:
Q  6 cataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaa 105  Q
    |||||||||||||||| ||| |||  ||| ||||||||||||||||||||  |||| |||||||| ||||||||||||||  ||||||||||||||||||    
T  32030739 cataagaatcacttttgaataagtatatcaaaacaaaaatcaattcacatctaacttacttttaaccaaaatcaattctctcaaactcaattctatcaaa 32030838  T
Q  106 atcaatt 112  Q
    |||||||    
T  32030839 atcaatt 32030845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 7 - 143
Target Start/End: Original strand, 7178804 - 7178939
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaa 106  Q
    |||||||||| |||||  ||| || ||||||||| ||||||||| |||||||||||||||||| ||||||| |||||||  ||||||||||||||||||     
T  7178804 ataagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactcacttttagtcaaaattaattctctcaaactcaattctatcaaac 7178902  T
Q  107 tcaattatcaccgccgtgaaaccaaacacacacttaa 143  Q
    |||||||||| |  ||   ||||||||||||||||||    
T  7178903 tcaattatcatcatcgccgaaccaaacacacacttaa 7178939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 32454557 - 32454696
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattct- 99  Q
    ||||||||||||||||||||||||  |||| ||||||||| || ||||||||| |  ||||||||||||| ||||||||||||||  ||||||||||||     
T  32454557 caactcataagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattcta 32454655  T
Q  100 atcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    ||||||||||||| || || |||  | ||||||||||||||    
T  32454656 atcaaaatcaattctcgccaccgccataccaaacacacact 32454696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 139
Target Start/End: Original strand, 41834938 - 41835050
Alignment:
Q  27 agtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaa 126  Q
    |||| ||||||||| |||||||||||| | |||||||||||||| ||||||||||||||  ||||| ||||||||||||||||||| || || |||  |     
T  41834938 agtgtatccaaacataaatcaattcacttccaactcacttttaaccaaaatcaattctctcaaactgaattctatcaaaatcaattctccccaccgccat 41835037  T
Q  127 accaaacacacac 139  Q
    |||||||||||||    
T  41835038 accaaacacacac 41835050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 24045851 - 24045985
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||| ||||| ||||| |||||| | || ||||||||||| ||||||||||||||   |||||||||||| ||||||||||||||  ||| |||||||||    
T  24045851 caacccataaaaatca-ttttaagtgagagcatccaaacataaatcaattcacatcagactcacttttaaccaaaatcaattctctcaaattcaattcta 24045949  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacaca 136  Q
    |||||||||||| ||||| |||  | ||||||||||    
T  24045950 tcaaaatcaattctcaccaccgccataccaaacaca 24045985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 3060314 - 3060205
Alignment:
Q  2 aactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctat 101  Q
    ||||||||||||||||||| || | |||  ||||||||| |||| |||||| ||  ||||||||||||||||||||||||||||  ||||| ||||||||    
T  3060314 aactcataagaatcacttt-aagtgagtatatccaaacataaattaattcatataaaactcacttttaatcaaaatcaattctctcaaacttaattctat 3060216  T
Q  102 caaaatcaatt 112  Q
    |||||||||||    
T  3060215 caaaatcaatt 3060205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 23914341 - 23914233
Alignment:
Q  6 cataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaa 105  Q
    ||||||||||||||||||||  ||| ||||||||  ||||||||||| || ||||||| ||||||  | |||||||||||  ||| ||||||||||||||    
T  23914341 cataagaatcacttttaaatgggtgtatccaaacgtaaatcaattcatatccaactcaattttaagtataatcaattctctcaaaatcaattctatcaaa 23914242  T
Q  106 atcaattat 114  Q
    |||||||||    
T  23914241 atcaattat 23914233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 34107035 - 34106903
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    |||||||||| |||||||||| | || ||  |||||  |||||||||||||  ||||||||||||| ||||| |||||||  ||||||||||||||||||    
T  34107035 tcataagaattacttttaaatgaatgtatttaaacattaatcaattcacatctaactcacttttaaccaaaaacaattcttttaaactcaattctatcaa 34106936  T
Q  105 aatcaattatcaccgccgtgaaaccaaacacac 137  Q
    |||||||| |  | ||||  |||||||||||||    
T  34106935 aatcaattttgtctgccgccaaaccaaacacac 34106903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 41740685 - 41740574
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||| |||||||||||||  |||| || |||||| ||| |||||||  |  ||||||| | ||||||||||||||||||  |||||||||||||    
T  41740685 caactcataacaatcacttttaaacaagtgtattcaaacataaaccaattcatctcaaactcacctataatcaaaatcaattctctcaaactcaattcta 41740586  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  41740585 tcaaaatcaatt 41740574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 2430388 - 2430248
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||| ||    |||| ||||||||| || ||||||||  |||||||||||||||| ||||||||||||||  ||||||||||| |    
T  2430388 caactcataagaatcacttctattgaagtgtatccaaacataa-tcaattcatgttcaactcacttttaaccaaaatcaattctctcaaactcaattcca 2430290  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    ||||||| |||| || || |||  | |||||| |||||||||    
T  2430289 tcaaaatgaattctcgccaccgccataccaaatacacactta 2430248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 27021156 - 27021283
Alignment:
Q  8 taagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaat 107  Q
    |||||||||||||||| | |||  | ||||||| ||||||||||||||| |||||| |||||| ||||||||||| ||  |||||||||| |||||||||    
T  27021156 taagaatcacttttaagtgagtata-ccaaacataaatcaattcacatttaactcatttttaaccaaaatcaattttctcaaactcaattatatcaaaat 27021254  T
Q  108 caattatcaccgccgtgaaaccaaacaca 136  Q
    || || | ||| |||  ||||||||||||    
T  27021255 cagttctaaccaccgccaaaccaaacaca 27021283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 5710475 - 5710337
Alignment:
Q  3 actcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatc 102  Q
    |||||||| |||||||| ||| | || | ||||||||| ||| |||||||||   ||||||||||||| |||||||||||||   |||||| ||||||||    
T  5710475 actcataaaaatcacttgtaa-taagcgtatccaaacataaagcaattcacaccaaactcacttttaaccaaaatcaattctttcaaactccattctatc 5710377  T
Q  103 aaaatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    |||||||||| || || |||  | ||||||||||||||||    
T  5710376 aaaatcaattctcgccaccgccataccaaacacacactta 5710337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 7714960 - 7715071
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||| |||||||||| ||| || | ||||  || ||||| | ||||||||| ||  ||||||||||||| ||||||||||||||  |||||||||||||    
T  7714960 caacttataagaatcaatttcaagtgagtgtgtcaaaacatatatcaattcatatctaactcacttttaaccaaaatcaattctctcaaactcaattcta 7715059  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  7715060 tcaaaatcaatt 7715071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 33953993 - 33953856
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||| |||||||||| ||    |||| ||||||||| || |||||| || ||||||||||||||||  |||||||||||||  |||||||||||||    
T  33953993 caactcatcagaatcacttctattaaagtgtatccaaacataa-tcaatttacgttcaactcacttttaaataaaatcaattctctcaaactcaattcta 33953895  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacac 139  Q
     ||||||||||| ||||| | |  | |||||||||||||    
T  33953894 ccaaaatcaattttcaccactgccataccaaacacacac 33953856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 140
Target Start/End: Original strand, 10058120 - 10058233
Alignment:
Q  27 agtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaa 126  Q
    |||| ||||||||| |||||||||||  | |||||||||||||| |||||||||| |||  |||||||||| |||||||||||||| || || |||  |     
T  10058120 agtgtatccaaacataaatcaattcatttccaactcacttttaaccaaaatcaatactctcaaactcaattatatcaaaatcaattctccccaccgccat 10058219  T
Q  127 accaaacacacact 140  Q
    || |||||||||||    
T  10058220 actaaacacacact 10058233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 19784863 - 19784946
Alignment:
Q  31 catccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattat 114  Q
    |||||||||| ||| || || ||||||||||||||||||| ||||||||||||   |||| ||||||| |||||||||||||||    
T  19784863 catccaaacataaaccactttacattcaactcacttttaaccaaaatcaattcaaataaaatcaattcaatcaaaatcaattat 19784946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 2483775 - 2483724
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattc 83  Q
    ||||||||| |||||||||||||||||||||||||||||  |||||||||||    
T  2483775 atccaaacataaatcaattcacattcaactcacttttaactaaaatcaattc 2483724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 4569130 - 4569089
Alignment:
Q  43 aatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  4569130 aatcaattcacactcaactcacttttaatcaaaatcaattct 4569089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 22811077 - 22811129
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    ||||||||| |||||| || ||||||||||||||||||| |||||||||||||    
T  22811077 atccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct 22811129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 20068942 - 20069033
Alignment:
Q  9 aagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||  ||||||| ||||||||| |||| |||| | | ||||||||||||| | ||||||||||||    |||||||||||||    
T  20068942 aagaatcacttttgcattagtgtatccaaacataaataaatttaaactcaactcacttttgaccaaaatcaattcgatcaaactcaattcta 20069033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 33468053 - 33467951
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaa 131  Q
    ||||||||| ||||||||  ||| ||||||||||||||| |||||||| ||||   ||| |||||| | | |||||||||| | ||| |||| |||||||    
T  33468053 atccaaacacaaatcaatatacactcaactcacttttaaccaaaatcagttctatcaaaatcaattttgttaaaatcaattctaaccaccgtcaaaccaa 33467954  T
Q  132 aca 134  Q
    |||    
T  33467953 aca 33467951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 112
Target Start/End: Complemental strand, 35847925 - 35847871
Alignment:
Q  58 aactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| ||| |||||||||||| |  |||||||||||||||||||||||||    
T  35847925 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 35847871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 24036627 - 24036676
Alignment:
Q  35 caaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    |||||| |||||| || ||||||||||||||||| |||||||||||||||    
T  24036627 caaacataaatcattttacattcaactcacttttcatcaaaatcaattct 24036676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 28869595 - 28869530
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcactt 66  Q
    ||||||||||||||||||||||| | |||| || |||||| |||||||| ||||| ||||| ||||    
T  28869595 caactcataagaatcacttttaagtaagtgtattcaaacataaatcaatccacatccaactaactt 28869530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 19204065 - 19203986
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    |||||||||||||||| ||  ||| ||||||||||||| ||| |||||||| |  |||| ||||||||| |||||||||||    
T  19204065 atccaaacaaaaatcacttttcatccaactcacttttattcataatcaattat-gtaaaatcaattctaccaaaatcaatt 19203986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 29922993 - 29923043
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||||||| |||| | |||||||||||||||||| || ||||||||||||    
T  29922993 atccaaacataaattacttcacattcaactcacttatagtcaaaatcaatt 29923043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 2868415 - 2868362
Alignment:
Q  31 catccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    |||||||||  |||||| || |||||||||||||||||||  ||||||||||||    
T  2868415 catccaaacttaaatcactttacattcaactcacttttaactaaaatcaattct 2868362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 3e-41; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 39636776 - 39636913
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||| |||||||||||||||| | |||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||    
T  39636776 caactcgtaagaatcacttttaagtaagtgtatccaaacataaatcaattcacatccaactcacttttaatcaaaatcaattctctcaaactcaattcta 39636875  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacaca 138  Q
    |||||||||||| || || |||| | ||||||||||||    
T  39636876 tcaaaatcaattctcgccaccgtcataccaaacacaca 39636913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 48550212 - 48550350
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    ||||| |||| |||||||||| |||||||||||||| ||||||||| ||||  |||||||||||||||||||||||||||| |||| |||||||||||||    
T  48550212 tcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaattctatcaa 48550311  T
Q  105 aatcaattatcaccgccgtgaaaccaaacacacacttaa 143  Q
    |||||||| || || |||  | |||||||||||||||||    
T  48550312 aatcaattctcgccaccgccataccaaacacacacttaa 48550350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 46830164 - 46830023
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||||| ||||||   |||| ||||||||| |||||||||||||| |||||||||||||| |||||||||||| | ||||||||||||||    
T  46830164 caactcataagaatcaattttaagaaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattcacttaaactcaattcta 46830065  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    |||||||||||| || || |||  | ||||||||||||||||    
T  46830064 tcaaaatcaattctcgccaccgccataccaaacacacactta 46830023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 6138715 - 6138572
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||| |||||| |||||||| |||| ||||||||| |||||||||||||| |||||||||||||| ||||||||||| |   |||||||||||||    
T  6138715 caactcatatgaatcatttttaaataagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattatttcaaactcaattcta 6138616  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacacttaat 144  Q
    |||||||||||| || || |||  ||||||||||||||| ||||    
T  6138615 tcaaaatcaattctccccaccgccaaaccaaacacacacgtaat 6138572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 25312710 - 25312853
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    ||||||||||| |||||||   |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||  |||||||||||||||||    
T  25312710 tcataagaatcgcttttaacaaagtgtatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaa 25312809  T
Q  105 aatcaattatcaccgccgtgaaaccaaacacacacttaatcaat 148  Q
    |||||||| ||    |||  ||||||||||||||| ||||||||    
T  25312810 aatcaattctcgttaccgccaaaccaaacacacacataatcaat 25312853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 32238153 - 32238010
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||| ||||||||| |||  ||||| ||||||||| ||  ||||||||||||||||||||||||| |||||||||||| |  |||||||||||||    
T  32238153 caactcatatgaatcacttctaatatagtgtatccaaacataac-caattcacattcaactcacttttaaccaaaatcaattcactcaaactcaattcta 32238055  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacacttaatc 145  Q
    ||||||||||||||| || |||  | |||||||||||||||||||    
T  32238054 tcaaaatcaattatcgccaccgctataccaaacacacacttaatc 32238010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 29149402 - 29149291
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||| |||| |||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||||||  |||||||||||||    
T  29149402 caactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaattcta 29149303  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  29149302 tcaaaatcaatt 29149291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 43772218 - 43772079
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||| |||||||||||| ||||  |||| ||||||||| ||||| |||||||| |||||||||||||| ||||||||||||||  |||||||||||||    
T  43772218 caactcgtaagaatcacttctaaaaaagtgtatccaaacataaatcgattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattcta 43772119  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    |||||||||||||||  | ||   ||||||||||||||||    
T  43772118 tcaaaatcaattatcgtcaccaccaaaccaaacacacact 43772079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 54150517 - 54150628
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||| |||||||||| ||||||   |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||  |||||||||||||    
T  54150517 caacttataagaatcatttttaacgaagtgtatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaattcta 54150616  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  54150617 tcaaaatcaatt 54150628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 13167521 - 13167627
Alignment:
Q  6 cataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaa 105  Q
    ||||||||||||||||||||  ||| ||||||| | ||||||||||||||||||||||||||||| ||||||||||||||  |||||||||| |||||||    
T  13167521 cataagaatcacttttaaatgggtgtatccaaatataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattatatcaaa 13167620  T
Q  106 atcaatt 112  Q
    |||||||    
T  13167621 atcaatt 13167627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 14564240 - 14564102
Alignment:
Q  2 aactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctat 101  Q
    |||||||||||||||||||||| | |  | ||||||||| ||||||||||| || |||||||| ||||| ||||||||||||||  ||||||||||||||    
T  14564240 aactcataagaatcacttttaactgaaggtatccaaacataaatcaattcatatccaactcacatttaaccaaaatcaattctctcaaactcaattctat 14564141  T
Q  102 caaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    ||||||||||| || ||||||   |||||||||||||||    
T  14564140 caaaatcaattctctccgccgcccaaccaaacacacact 14564102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 16566306 - 16566407
Alignment:
Q  11 gaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaa 110  Q
    |||||||||||||   |||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  16566306 gaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaa 16566405  T
Q  111 tt 112  Q
    ||    
T  16566406 tt 16566407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 26651941 - 26651805
Alignment:
Q  3 actcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatc 102  Q
    |||||||||||| |||||||    |||| ||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||  ||||| |||||||||    
T  26651941 actcataagaattacttttagtaaagtgtatctaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaacttaattctatc 26651842  T
Q  103 aaaatcaattatcaccgccgtgaaaccaaacacacac 139  Q
    |||||||||| || ||||||  | |||||||||||||    
T  26651841 aaaatcaattctcgccgccgccataccaaacacacac 26651805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 150
Target Start/End: Original strand, 39187751 - 39187874
Alignment:
Q  27 agtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaa 126  Q
    |||| ||||||||| |||||||||||||||||| | |||||||| ||||||||||||||  ||||||||||||||||||||||||| || || |||  ||    
T  39187751 agtgtatccaaacataaatcaattcacattcaaattacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctctccaccgccaa 39187850  T
Q  127 accaaacacacacttaatcaattt 150  Q
    |||||||||||||| || ||||||    
T  39187851 accaaacacacactaaaccaattt 39187874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 51922931 - 51923070
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||| |||||||    |||| ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||  |||||||||||||    
T  51922931 caactcataagaattacttttagtaaagtgtatccaaacataaatcaattcagattcaactcacttttaaccaaaatcaattctctcaaactcaattcta 51923030  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
     ||||||||||| ||  |||||  | ||||||||||||||    
T  51923031 acaaaatcaattctcgtcgccgccataccaaacacacact 51923070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 43781613 - 43781477
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||||  |||| ||||||||| || ||||||||| |  ||||||||||||| ||||||||||||||  |||||||||||||    
T  43781613 caactcataagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattcta 43781515  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacaca 138  Q
    |||||||||||| || || |||  | ||||||||||||    
T  43781514 tcaaaatcaattctcgccaccgccataccaaacacaca 43781477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 30842123 - 30842233
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||||||||| |||  |||| ||||||||| || ||||||||| |  ||||||||||||||||||||||||||||  |||||||||||||    
T  30842123 caactcataagaatcactttcaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaatcaaaatcaattctctcaaactcaattcta 30842221  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  30842222 tcaaaatcaatt 30842233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 42944993 - 42944882
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||| |||||||||||||||||| | |||  ||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||  ||| |||||||||    
T  42944993 caacacataagaatcacttttaagtaagtatatctaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattcta 42944894  T
Q  101 tcaaaatcaatt 112  Q
    ||||||| ||||    
T  42944893 tcaaaataaatt 42944882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 19592319 - 19592185
Alignment:
Q  8 taagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaat 107  Q
    |||||||||||||||    |||| ||||||||| |||||||||||| | |||||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  19592319 taagaatcacttttagtaaagtgtatccaaacataaatcaattcacttccaactcacttttaaccaaaatcaattctctaaaactcaattctatcaaaat 19592220  T
Q  108 caattatcaccgccgtgaaaccaaacacacactta 142  Q
    ||||| || || |||  | | ||||||||||||||    
T  19592219 caattctccccaccgccatatcaaacacacactta 19592185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 46926043 - 46926153
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    |||||| |||||||||||||  |||| ||||||||| ||||||||||||||  ||||||||||||| ||||| ||||| ||  |||||||||||||||||    
T  46926043 tcataaaaatcacttttaaacgagtgtatccaaacataaatcaattcacatctaactcacttttaaccaaaaacaattttctcaaactcaattctatcaa 46926142  T
Q  105 aatcaattatc 115  Q
    |||||||||||    
T  46926143 aatcaattatc 46926153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 49136513 - 49136647
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||| | |||| ||||||||| ||||||||||||||  ||||||||||||| || |||||||||||  |||||||||| ||    
T  49136513 caactcataagaatcacttttaagtgagtgtatccaaacataaatcaattcacatcaaactcacttttaaccataatcaattctctcaaactcaattata 49136612  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacac 135  Q
     || ||||||||| | | ||||  |||||||||||    
T  49136613 ccagaatcaattaactctgccgccaaaccaaacac 49136647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 9889427 - 9889295
Alignment:
Q  3 actcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatc 102  Q
    |||||||||||||||||| || | |||| ||||||||| | | ||||||| ||  ||||||||||||||||||||||||||||  |||||||||||||||    
T  9889427 actcataagaatcactttcaagtgagtgtatccaaacatata-caattcatatctaactcacttttaatcaaaatcaattctctcaaactcaattctatc 9889329  T
Q  103 aaaatcaattatcaccgccgtgaaaccaaacaca 136  Q
    |||||||||| ||||| |||  | ||||||||||    
T  9889328 aaaatcaattctcaccaccgccataccaaacaca 9889295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 15603351 - 15603492
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||||| ||||||   |||  ||| ||||| ||||||||||||||  ||||||||||| | || |||||||| ||  |||||||||||||    
T  15603351 caactcataagaatcatttttaagcaagtatatctaaacacaaatcaattcacatcaaactcactttttaccataatcaattatctcaaactcaattcta 15603450  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    |||||||||||| || || |||| ||||||||||||||||||    
T  15603451 tcaaaatcaattctccccaccgtcaaaccaaacacacactta 15603492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 49519725 - 49519838
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    |||||||||||| ||||||   |||| ||||||||| |||| ||||||||| |||||||||||||| ||||||||||||||  |||||||||||||||||    
T  49519725 tcataagaatcatttttaagcaagtgtatccaaacataaataaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctatcaa 49519824  T
Q  105 aatcaattatcacc 118  Q
    || ||||| |||||    
T  49519825 aaccaattctcacc 49519838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 6505203 - 6505331
Alignment:
Q  12 aatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaat 111  Q
    ||||||||||| || |||| ||| ||||| ||||||||||||||  |||||| |||||| ||||||||||||||  |||||||||||||||||| |||||    
T  6505203 aatcacttttatatgagtgtatctaaacataaatcaattcacatcaaactcatttttaaccaaaatcaattctctcaaactcaattctatcaaagtcaat 6505302  T
Q  112 tatcaccgccgtgaaaccaaacacacact 140  Q
    ||||  |||||  || |||||||||||||    
T  6505303 tatcgacgccgccaatccaaacacacact 6505331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 14072494 - 14072637
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||| |||||||||| ||    |||| ||||||||| || |||||| || |||||||||||||||| ||||||||||||||  |||||||||||||    
T  14072494 caactcattagaatcacttctattaaagtgtatccaaacataa-tcaatttaccttcaactcacttttaaacaaaatcaattctctcaaactcaattcta 14072592  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacacttaatc 145  Q
    |||||||||||| ||||| |||  | ||||||||||||| |||||    
T  14072593 tcaaaatcaattctcaccaccgccataccaaacacacacataatc 14072637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 29 - 140
Target Start/End: Original strand, 41866173 - 41866284
Alignment:
Q  29 tgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaac 128  Q
    |||||||||||| |||||||||||||| ||||||||||||||  ||| ||||||| |  |||||||||| ||||||||||||||||| || |||  ||||    
T  41866173 tgcatccaaacataaatcaattcacatccaactcacttttaactaaactcaattccctcaaactcaattttatcaaaatcaattatcgccaccgccaaac 41866272  T
Q  129 caaacacacact 140  Q
    ||||||||||||    
T  41866273 caaacacacact 41866284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 48407792 - 48407682
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||||||||| |||  |||| ||||||||| || ||||||||| |  ||||||||||||| ||||||||||||||  |||||||||||||    
T  48407792 caactcataagaatcactttcaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattcta 48407694  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  48407693 tcaaaatcaatt 48407682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 105
Target Start/End: Complemental strand, 19599584 - 19599487
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaa 105  Q
    |||||||||| |||||| | | |||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  19599584 ataagaatcaattttaagtaattgcatccaaacataaatcaatt-acattcaactcacttttattcaaaatcaattctctcaaactcaattctatcaaa 19599487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 149
Target Start/End: Original strand, 54488630 - 54488744
Alignment:
Q  35 caaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaaca 134  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||||||   ||| |||||||| ||||||||||||||| || |||   |||||||||    
T  54488630 caaacataaatcaattcacattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaattatctccaccgcagaaccaaaca 54488729  T
Q  135 cacacttaatcaatt 149  Q
    ||||||| |||||||    
T  54488730 cacacttcatcaatt 54488744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 38306008 - 38306141
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaa 106  Q
    |||||||||||||||   |||  | ||||||||| |||||||||| ||||||||||||||||||  ||||||||||||   ||| |||||||| ||||||    
T  38306008 ataagaatcacttttgctttaaggtatccaaacataaatcaattcgcattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaa 38306107  T
Q  107 tcaattatcaccgccgtgaaaccaaacacacact 140  Q
    ||||||||| || ||||  |||||||||||||||    
T  38306108 tcaattatctccaccgtagaaccaaacacacact 38306141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 55638834 - 55638730
Alignment:
Q  17 cttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatca 116  Q
    ||||||||| |||| ||| ||||| ||||||||| ||||| |||||||||||||  |||||||||||||  ||||||||||||||||||||||||| ||     
T  55638834 cttttaaataagtgtatctaaacataaatcaatttacatttaactcacttttaacaaaaatcaattctctcaaactcaattctatcaaaatcaattctcg 55638735  T
Q  117 ccgcc 121  Q
    |||||    
T  55638734 ccgcc 55638730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 56241930 - 56241846
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctc 85  Q
    |||||||||||||||||||||| |||| || ||||||||| ||||||||||| ||  ||||||||||||||||||||||||||||    
T  56241930 caactcataagaatcacttttacattaatgtatccaaacataaatcaattcatatcaaactcacttttaatcaaaatcaattctc 56241846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 13183145 - 13182998
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||| |||| ||||| |||||||| |||| ||||||||| |||||||||||| || ||||  ||||||| ||||||||||| ||  | |||||||| ||    
T  13183145 caacttataaaaatcatttttaaataagtgtatccaaacataaatcaattcaccttaaacttgcttttaaccaaaatcaattatctcagactcaatttta 13183046  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacacttaatcaat 148  Q
    |||||||||||||||  | |||| | |||||||||| | |||||||||    
T  13183045 tcaaaatcaattatcgtcaccgtcataccaaacacataattaatcaat 13182998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 26426209 - 26426072
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||| ||||||||||||||| | || | ||||||||| || |||||| | ||  ||||||||||||| ||||||||||| ||  |||||||||||||    
T  26426209 caactcaaaagaatcacttttaattaagcgtatccaaacataa-tcaatttatatctaactcacttttaaccaaaatcaattttctcaaactcaattcta 26426111  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacac 139  Q
    |||||||||||| || || |||| | |||||||||||||    
T  26426110 tcaaaatcaattctccccaccgtcataccaaacacacac 26426072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 140
Target Start/End: Original strand, 28987051 - 28987148
Alignment:
Q  43 aatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    ||||||||||| |  ||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| ||||| |||  | ||||||||||||||    
T  28987051 aatcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattttcaccaccgccataccaaacacacact 28987148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 9893702 - 9893837
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||||||||| || |  ||| ||||||||| | ||||||||| ||  ||||||||||| |  |||||||||||||  ||| |||||||||    
T  9893702 caactcataagaatcactttcaagtgggtgtatccaaacatatatcaattcatatctaactcacttttgacaaaaatcaattctctcaaattcaattcta 9893801  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacaca 136  Q
    |||||||||||| ||||| |||  | ||||||||||    
T  9893802 tcaaaatcaattctcaccaccgccataccaaacaca 9893837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 14076010 - 14076140
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    ||||||||||||||||||| |   ||  |||||||| ||||||||| ||||  |||||||||| || ||||||||||| ||  |||||||||||||||||    
T  14076010 tcataagaatcacttttaagtatatgtttccaaacataaatcaatttacatcaaactcacttt-aaccaaaatcaattttctcaaactcaattctatcaa 14076108  T
Q  105 aatcaattatcaccgccgtgaaaccaaacaca 136  Q
    |||||||| |||||||||  |||| |||||||    
T  14076109 aatcaattctcaccgccgccaaactaaacaca 14076140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 33574203 - 33574274
Alignment:
Q  35 caaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaa 106  Q
    |||||| ||||||||||||||||||||||||||||| |||||| |||||||  |||||||||||||||||||    
T  33574203 caaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaa 33574274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 142
Target Start/End: Original strand, 54153077 - 54153176
Alignment:
Q  43 aatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    |||||||||||||||||||||||||||| |||||||||||| |  |||||||||| ||| ||||||||||||| || |||  | |||||||||| |||||    
T  54153077 aatcaattcacattcaactcacttttaaccaaaatcaattcactcaaactcaattatattaaaatcaattatcgccaccgctataccaaacacatactta 54153176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 46 - 139
Target Start/End: Original strand, 48908309 - 48908402
Alignment:
Q  46 caattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaacacacac 139  Q
    ||||||||||  ||||||||||||| ||||||||||||||  |||||||||  ||| |||||||||| |||||||||  |||||||||||||||    
T  48908309 caattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaataatattaaaatcaattttcaccgccgccaaaccaaacacacac 48908402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 4954146 - 4954062
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctc 85  Q
    ||||||||||||||||||||||| | || | | ||||||| ||||||||||||||  ||||||||||||| ||||||||||||||    
T  4954146 caactcataagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaaactcacttttaaccaaaatcaattctc 4954062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 54735745 - 54735611
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||| |   ||  |||||||| ||| ||||| ||||  |||||| ||| || ||||||||||| ||  |||||||||||||    
T  54735745 caactcataagaatcacttttaagtatatgtttccaaacataaaccaatttacatcaaactcaattt-aaccaaaatcaattttctcaaactcaattcta 54735647  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacaca 136  Q
    |||||||||||| |||||||||  ||||||| ||||    
T  54735646 tcaaaatcaattctcaccgccgccaaaccaagcaca 54735611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 2175231 - 2175161
Alignment:
Q  12 aatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||||||||||   |||||||||||||| ||||||||||||||  |||||||||||||||||||||||||    
T  2175231 aatcacttttaagcgagtgcatccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaatt 2175161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 48550522 - 48550439
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    ||||||||||||||||||| ||    |||  ||||||||| |||||||||||||| |||||||||||||| |||||||||||||    
T  48550522 caactcataagaatcacttctattaaagtttatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 48550439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 38263891 - 38264001
Alignment:
Q  2 aactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctat 101  Q
    |||||||||| ||||||||||| | |||  || |||||| |||| |||||||||  |||||| |||||| |||||| |||| ||  |||||||||| |||    
T  38263891 aactcataagtatcacttttaagtgagtatattcaaacataaattaattcacatcaaactcaattttaagcaaaattaattttctcaaactcaattatat 38263990  T
Q  102 caaaatcaatt 112  Q
    |||||||||||    
T  38263991 caaaatcaatt 38264001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 45780095 - 45779970
Alignment:
Q  10 agaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatca 109  Q
    |||||||||||||| | | || ||| |||||||||| |||||| |   ||||||||||| | ||||||||||| ||  ||||||||||||||| ||||||    
T  45780095 agaatcacttttaagtgaatgtatctaaacaaaaattaattcataccaaactcactttttaccaaaatcaatt-tctcaaactcaattctatcgaaatca 45779997  T
Q  110 attatcaccgccgtgaaaccaaacaca 136  Q
    ||| ||| |||||  ||||||||||||    
T  45779996 attctcatcgccgccaaaccaaacaca 45779970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 15619636 - 15619703
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattct 99  Q
    ||||||||| | |||||||||||| |||||||||||| | ||||||||||||||  ||||||||||||    
T  15619636 atccaaacatacatcaattcacatccaactcactttttaccaaaatcaattctctcaaactcaattct 15619703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 53914921 - 53914987
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattct 99  Q
    ||||||||| ||||||||| |||||||||||||||||| |||||||| ||||||  ||||||||||||    
T  53914921 atccaaacataaatcaatt-acattcaactcacttttagtcaaaatcgattctctgaaactcaattct 53914987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 16492949 - 16492999
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  16492949 atccaaacataaataaattcacattcaactcacttttaatcaaactcaatt 16492999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 36150626 - 36150676
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||||||| |||||| || |||||||||||||||||||||||||||||||    
T  36150626 atccaaacataaatcactttacattcaactcacttttaatcaaaatcaatt 36150676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 54487305 - 54487219
Alignment:
Q  11 gaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaatt 97  Q
    |||||||||| | || | || ||||||||| ||||||||| ||||||||||||||||| ||| |||||||||||   ||||||||||    
T  54487305 gaatcactttcacatcaatgtatccaaacataaatcaatttacattcaactcacttttgatcgaaatcaattctatcaaactcaatt 54487219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 22694638 - 22694581
Alignment:
Q  55 ttcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    |||||||||||||||| ||||||||||||| || || ||||||||| |||||||||||    
T  22694638 ttcaactcacttttaaccaaaatcaattctacttaaatcaattctaccaaaatcaatt 22694581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 48556585 - 48556686
Alignment:
Q  43 aatcaattcacattcaactcacttttaatcaaaa-tcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaacacacactt 141  Q
    ||||||||||||||||| ||||||||  |||||| |||||| |   |||||||||||||||||||||||||||  || |||   |||||||| |||||||    
T  48556585 aatcaattcacattcaagtcactttttttcaaaaatcaattttatcaaactcaattctatcaaaatcaattatttccaccgctgaaccaaacgcacactt 48556684  T
Q  142 aa 143  Q
    ||    
T  48556685 aa 48556686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 14054853 - 14054953
Alignment:
Q  12 aatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaat 111  Q
    ||||||||||| || |||  ||||||||| ||||||||||||||  ||||||||||| |  ||| ||||||||   |||||||||| | |||||||||||    
T  14054853 aatcacttttatataagtttatccaaacataaatcaattcacatcaaactcacttttgactaaactcaattctttcaaactcaattatgtcaaaatcaat 14054952  T
Q  112 t 112  Q
    |    
T  14054953 t 14054953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 38694039 - 38694171
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||| ||||||||||||||||||   |||| ||||||||| |||  ||||  || |||||| |||||||  |||||||||||||  ||||||||||  ||    
T  38694039 caacccataagaatcacttttaagcgagtgtatccaaacataaactaatttgcactcaacttacttttagacaaaatcaattcttttaaactcaatcata 38694138  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaac 133  Q
    ||||||| |||| ||| ||| | ||| ||||||    
T  38694139 tcaaaattaattctcatcgcagcgaatccaaac 38694171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 39993579 - 39993627
Alignment:
Q  36 aaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    ||||| ||||||||||||||| |||||| ||||||||||||||||||||    
T  39993579 aaacataaatcaattcacatttaactcatttttaatcaaaatcaattct 39993627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 28947811 - 28947733
Alignment:
Q  34 ccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||| |||||| || || |||||||||||||||| ||||||||||||  || || ||||||| | |||||||||||    
T  28947811 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaattccacttaaatcaattccaccaaaatcaatt 28947733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 142
Target Start/End: Original strand, 40286304 - 40286413
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaa 131  Q
    ||||||||| |||||| ||  || |||||||| ||||||||||||||||||||  || | ||| ||||||||||||||||| |  || |||   ||||||    
T  40286304 atccaaacataaatcatttttcactcaactcaattttaatcaaaatcaattct-atagaatcagttctatcaaaatcaattttgtccaccgcacaaccaa 40286402  T
Q  132 acacacactta 142  Q
    |||||||||||    
T  40286403 acacacactta 40286413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 22699764 - 22699829
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaatt 97  Q
    ||||||||| |||||| || |||||||||| |||||||| ||||||||||||| | ||| ||||||    
T  22699764 atccaaacataaatcactttacattcaacttacttttaaccaaaatcaattctaccaaaatcaatt 22699829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 22980766 - 22980701
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaatt 97  Q
    ||||||||| |||||| || |||||||||| |||||||| ||||||||||||| | ||| ||||||    
T  22980766 atccaaacataaatcactttacattcaacttacttttaaccaaaatcaattctaccaaaatcaatt 22980701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 22994353 - 22994288
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaatt 97  Q
    ||||||||| |||||| || |||||||||| |||||||| ||||||||||||| | ||| ||||||    
T  22994353 atccaaacataaatcactttacattcaacttacttttaaccaaaatcaattctaccaaaatcaatt 22994288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 14597688 - 14597581
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaa 131  Q
    ||||||||| |||||| ||  ||||||||||||||||||||||||| | || |  |||| ||||||| | |||||||||||||   | ||| | ||||||    
T  14597688 atccaaacataaatcacttttcattcaactcacttttaatcaaaattagttat-gtaaaatcaattcaaccaaaatcaattattttcaccgcgtaaccaa 14597590  T
Q  132 acacacact 140  Q
    |||||||||    
T  14597589 acacacact 14597581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 30887247 - 30887199
Alignment:
Q  2 aactcataagaatcacttttaaattagtgcatccaaacaaaaatcaatt 50  Q
    ||||||||||||||||||||| ||| ||| ||||||||| |||||||||    
T  30887247 aactcataagaatcacttttatattggtgtatccaaacataaatcaatt 30887199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 144
Target Start/End: Complemental strand, 38740366 - 38740255
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaa 131  Q
    ||||||||| |||||| ||||  |||||||||||||||  ||||||||||| | | ||| |||||||  ||||||||||||     | ||||| ||||||    
T  38740366 atccaaacataaatcacttcaacttcaactcacttttatccaaaatcaattttac-aaaatcaattcattcaaaatcaattccatacaccgtggaaccaa 38740268  T
Q  132 acacacacttaat 144  Q
    |||||||||||||    
T  38740267 acacacacttaat 38740255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 136
Target Start/End: Original strand, 53532019 - 53532103
Alignment:
Q  52 acattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaacaca 136  Q
    |||| ||||||||||||||  |||||||||| |   |||||||||| |||||||||||||| ||||| |||   |||||||||||    
T  53532019 acatccaactcacttttaactaaaatcaattatgtcaaactcaattttatcaaaatcaattctcaccaccgccgaaccaaacaca 53532103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 5835793 - 5835851
Alignment:
Q  53 cattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||| ||| |||||||||||||||||||| | ||| ||||||| |||||||||||||    
T  5835793 cattcaattcagttttaatcaaaatcaattctac-aaaatcaattcaatcaaaatcaatt 5835851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 31520465 - 31520355
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||| |||||||||||| | ||   ||| ||||| ||||| |||||||  |||||||||||||| |||||| ||||||   |||||  ||||||    
T  31520465 caactcataaaaatcacttttaa-taagcatatctaaacataaatccattcacacccaactcacttttaaccaaaattaattctttcaaacttcattcta 31520367  T
Q  101 tcaaaatcaatt 112  Q
     |||||||||||    
T  31520366 ccaaaatcaatt 31520355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 47384987 - 47385033
Alignment:
Q  36 aaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||| ||||||||||||||| |||||| |||||||||||| |||||    
T  47384987 aaacataaatcaattcacatttaactcatttttaatcaaaaacaatt 47385033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 523167 - 523252
Alignment:
Q  27 agtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    |||| ||||||||| ||||||||||| ||| |||||||||||   ||||||||||| |   || |||||||  |||||||||||||    
T  523167 agtgaatccaaacataaatcaattcatattgaactcactttttcccaaaatcaattttgtcaagctcaattaaatcaaaatcaatt 523252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 8754155 - 8754219
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatc 72  Q
    |||||||||| |||||  | | || ||||||||| ||||||||| |||||||||||||||||||||    
T  8754155 ataagaatcaattttaggtgattgtatccaaacataaatcaatt-acattcaactcacttttaatc 8754219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 5e-40; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 9988594 - 9988455
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||| ||||||||||||||| |||| ||||||||| |||||||||||||| ||||||||||||||  |||||||||||||  |||||||||||||    
T  9988594 caactcatatgaatcacttttaaataagtgtatccaaacataaatcaattcacatccaactcacttttaacaaaaatcaattctctcaaactcaattcta 9988495  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    |||||||||||| || || |||  ||||||||||||||||    
T  9988494 tcaaaatcaattctccccaccgccaaaccaaacacacact 9988455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 142
Target Start/End: Complemental strand, 1945122 - 1944991
Alignment:
Q  11 gaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaa 110  Q
    |||||||||||||   |||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  1945122 gaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaa 1945023  T
Q  111 ttatcaccgccgtgaaaccaaacacacactta 142  Q
    || || ||||||  | ||||||||||||||||    
T  1945022 ttctccccgccgccataccaaacacacactta 1944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 7472766 - 7472629
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||||| |||| ||||||||| || |||||||||||  ||||||||||||| ||||||||||||||  |||||||||||||    
T  7472766 caactcataagaatcacttttaaataagtgtatccaaacataa-tcaattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaattcta 7472668  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacac 139  Q
    |||||||||||| || || |||| | |||||||||||||    
T  7472667 tcaaaatcaattctcgccaccgtcataccaaacacacac 7472629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 42089625 - 42089482
Alignment:
Q  1 caactcataagaatcacttttaaattagtg----catccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaat 96  Q
    ||||||||||||||||||||||||| ||||     ||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||| |||    
T  42089625 caactcataagaatcacttttaaataagtgtatctatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctcttgaacttaat 42089526  T
Q  97 tctatcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    |||||||||||||||| ||| | |||  ||| ||||||||||||    
T  42089525 tctatcaaaatcaattttcatcaccgccaaatcaaacacacact 42089482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 7 - 139
Target Start/End: Complemental strand, 25747968 - 25747837
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaa 106  Q
    |||||||||| |||||  ||| || ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||     
T  25747968 ataagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaac 25747870  T
Q  107 tcaattatcaccgccgtgaaaccaaacacacac 139  Q
    |||||||||||| ||| | ||||||||||||||    
T  25747869 tcaattatcaccaccgcggaaccaaacacacac 25747837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 2213662 - 2213773
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||  ||||||||||||| ||||||||||||||  |||||||||||||    
T  2213662 caactcataagaatcacttttaaataagtgtatccaaagacaaatcaattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaattcta 2213761  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  2213762 tcaaaatcaatt 2213773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 2213521 - 2213659
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||| |||| |||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||||||  |||||||||||||    
T  2213521 caactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaattcta 2213620  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacac 139  Q
    |||||||||||| || || |||  | |||||||||||||    
T  2213621 tcaaaatcaattctccccaccgctataccaaacacacac 2213659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 28127380 - 28127242
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||| |||| |||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||||||  ||||| |||||||    
T  28127380 caactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactaaattcta 28127281  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacac 139  Q
    |||||||||||| || || |||  | |||||||||||||    
T  28127280 tcaaaatcaattctccccaccgctataccaaacacacac 28127242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 6479596 - 6479668
Alignment:
Q  140 ttaatcaattttgatattgattttctttcttgttttgttcggaagtacaaaagactcttcttcaatctgatgt 212  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6479596 ttaatcgattttgatattgattttctttcttgttttgttcggaagtacaaaagactcttcttcaatctgatgt 6479668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 7 - 112
Target Start/End: Complemental strand, 34433394 - 34433288
Alignment:
Q  7 ataagaatcacttttaaatt-agtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaa 105  Q
    ||||||||||||||| | || | || ||||||||| |||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  34433394 ataagaatcactttttactttattgtatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctgtcaaactcaattctatcaaa 34433295  T
Q  106 atcaatt 112  Q
    |||||||    
T  34433294 atcaatt 34433288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 32 - 142
Target Start/End: Original strand, 36548245 - 36548355
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaa 131  Q
    ||||||||| ||||||||||||||   |||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||| |||  | |||||    
T  36548245 atccaaacataaatcaattcacatcagactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattttcaccaccgccataccaa 36548344  T
Q  132 acacacactta 142  Q
    |||||||||||    
T  36548345 acacacactta 36548355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 5916334 - 5916194
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||| | |||||||||||||   |||| ||||||||| || |||||||||||||||||||||||||| ||||||||||||||  ||| | |||||||    
T  5916334 caactcacatgaatcacttttaataaagtgtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctctcaaaattaattcta 5916236  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    |||||||||||| || ||||||  | ||||||||||||||||    
T  5916235 tcaaaatcaattctccccgccgccataccaaacacacactta 5916194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 36312292 - 36312430
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||| | |||||||||||||   |||| ||||||||| || |||||||||||||||||||||||||| ||||||||||||||  ||| | |||||||    
T  36312292 caactcacatgaatcacttttaataaagtgtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctctcaaaattaattcta 36312390  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    |||||||||||| || ||||||  | ||||||||||||||    
T  36312391 tcaaaatcaattctccccgccgccataccaaacacacact 36312430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 39141562 - 39141425
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||||| |||||||| |||| ||||||||| || |||||||| || |||||||||||||| |||||||||||||   |||||||||| ||    
T  39141562 caactcataagaatcatttttaaatgagtgtatccaaacataa-tcaattcatatccaactcacttttaaccaaaatcaattctttcaaactcaattata 39141464  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacac 139  Q
    |||||||||||| || || |||   ||||||||||||||    
T  39141463 tcaaaatcaattctcgccaccgcccaaccaaacacacac 39141425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 44619154 - 44619043
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||| ||||| |||||||  |||| ||||||||| |||||||||| | |  ||||||||||||| ||||||||||||||  |||||||||||||    
T  44619154 caactcataataatcatttttaaacaagtgtatccaaacataaatcaattcccctcaaactcacttttaaccaaaatcaattctctcaaactcaattcta 44619055  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  44619054 tcaaaatcaatt 44619043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 30007613 - 30007535
Alignment:
Q  34 ccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||| ||||||||||||||||||||||||||||| |||||| |||||||  |||||||||||||||||||||||||    
T  30007613 ccaaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 30007535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 45714735 - 45714626
Alignment:
Q  27 agtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaa 126  Q
    |||| ||||||||| ||||||||||||||  |||||| |||||||||||||||||||||  |||||||||| |||||||||||||| | | || ||| ||    
T  45714735 agtgtatccaaacataaatcaattcacatcgaactcatttttaatcaaaatcaattctctcaaactcaattatatcaaaatcaattctgatcgtcgtcaa 45714636  T
Q  127 accaaacaca 136  Q
    ||||||||||    
T  45714635 accaaacaca 45714626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 7296181 - 7296309
Alignment:
Q  12 aatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaat 111  Q
    ||||||||||| || |||| ||||||||| ||||||||||||||  |||||| |||||| ||||||||||||||  |||||||||| ||||||| |||||    
T  7296181 aatcacttttatatgagtgtatccaaacataaatcaattcacatcaaactcatttttaaccaaaatcaattctctcaaactcaattatatcaaagtcaat 7296280  T
Q  112 tatcaccgccgtgaaaccaaacacacact 140  Q
    ||||  ||||   || |||||||||||||    
T  7296281 tatcggcgccaccaatccaaacacacact 7296309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 8170369 - 8170469
Alignment:
Q  43 aatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||| || || |||    ||||||||||||||||    
T  8170369 aatcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaattaattctcgccaccgccctaccaaacacacactta 8170468  T
Q  143 a 143  Q
    |    
T  8170469 a 8170469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 31224695 - 31224806
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||    | |  ||||||||| |||||||||||||| ||||||||||||||  ||||||||||||   |||||||||||||    
T  31224695 caactcataagaatcacttttagtaaaatatatccaaacataaatcaattcacatccaactcacttttaactaaaatcaattctttcaaactcaattcta 31224794  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  31224795 tcaaaatcaatt 31224806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 2215284 - 2215406
Alignment:
Q  18 ttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcac 117  Q
    |||||||  |||| ||||||||| |||||||||||| |  ||||||||||||| ||||||||||||||  || |||||||||||||||||||||| ||||    
T  2215284 ttttaaacaagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctctcaagctcaattctatcaaaatcaattctcac 2215383  T
Q  118 cgccgtgaaaccaaacacacact 140  Q
      |||  | ||||||||||||||    
T  2215384 aaccgctataccaaacacacact 2215406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 3853921 - 3854026
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaa 106  Q
    |||||||||| ||||| || | || ||||||||| ||||||||| |||||||||||||||||||||||||||||||||   ||| ||||||| ||||||     
T  3853921 ataagaatcaattttacatgaatgtatccaaacataaatcaatttacattcaactcacttttaatcaaaatcaattctatcaaaatcaattccatcaaac 3854020  T
Q  107 tcaatt 112  Q
    ||||||    
T  3854021 tcaatt 3854026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 32502001 - 32502145
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||| ||| ||| |||||||| | | || ||||||||| || ||||||||| |  ||||||||||||| ||||||||||||||  |||||||||||||    
T  32502001 caactcgtaaaaattacttttaattgaatgtatccaaacataa-tcaattcacctaaaactcacttttaaccaaaatcaattctctcaaactcaattcta 32502099  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacacttaatca 146  Q
    |||||||||||| ||||  |||  | |||||||||||| |||||||    
T  32502100 tcaaaatcaattttcacgaccgccataccaaacacacatttaatca 32502145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 7295439 - 7295302
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||| | ||||||||||| ||  ||| ||||||||| ||||||||| || |  |||||| |||||| || |||||||||||  |||||||||||||    
T  7295439 caactcatgataatcacttttatat--gtgtatccaaacataaatcaatttacgtcaaactcatttttaaccagaatcaattctctcaaactcaattcta 7295342  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    ||||||| |||||||  |||||| || |||||||||||||    
T  7295341 tcaaaattaattatcgacgccgtcaatccaaacacacact 7295302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 26208015 - 26207879
Alignment:
Q  8 taagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaat 107  Q
    ||||||||| |||||| | |||| ||| ||||| |||||||||||||| ||||| |||||||| ||||| ||||||||  ||| | ||||||||||||||    
T  26208015 taagaatcaattttaattaagtgtatcaaaacataaatcaattcacatccaactgacttttaaccaaaaccaattctctcaaaattaattctatcaaaat 26207916  T
Q  108 caattatcaccgccgtgaaaccaaacacacacttaat 144  Q
    ||||| ||  | |||| | ||||||||||||| ||||    
T  26207915 caattttcgtcaccgtcataccaaacacacacataat 26207879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 28261309 - 28261449
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||| ||  | || | ||||||| | |||||||||||||| |||||||||||||| ||||||||||||||  |||||||||| ||    
T  28261309 caactcataagaatcacttctatgtgagagtatccaaatataaatcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaattgta 28261408  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacactt 141  Q
    | ||||| |||| || || |||   | ||||||||||||||    
T  28261409 ttaaaattaattctctccaccgcccacccaaacacacactt 28261449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 16467101 - 16467212
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||| ||||||||||||||||| ||||    ||||||||| ||||||||| ||||  ||||||||||||| ||||||||||| | | ||| |||||||||    
T  16467101 caacccataagaatcacttttacattatcatatccaaacataaatcaatttacatctaactcacttttaaccaaaatcaattatgccaaaatcaattcta 16467200  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  16467201 tcaaaatcaatt 16467212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 14821178 - 14821291
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||| ||    |||| ||||||||| || |||||||||||| |||||||||||||  ||||||||||| |  |||||||||||||    
T  14821178 caactcataagaatcacttctagtaaagtgtatccaaacataa-tcaattcacattaaactcacttttaactaaaatcaattcactcaaactcaattcta 14821276  T
Q  101 tcaaaatcaattatc 115  Q
    ||||||| |||||||    
T  14821277 tcaaaattaattatc 14821291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 8041322 - 8041397
Alignment:
Q  29 tgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaa 105  Q
    |||||||||||| ||||||||| |||||||| ||||||||| |||||||||||||||  ||||||||||||||||||    
T  8041322 tgcatccaaacataaatcaatt-acattcaattcacttttattcaaaatcaattctctcaaactcaattctatcaaa 8041397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 31562776 - 31562669
Alignment:
Q  2 aactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctat 101  Q
    |||||||||||||||||||||||  ||||  |||||||| || ||||||||| |  || |||||||||| ||||||||||||||  |||||||||| |||    
T  31562776 aactcataagaatcacttttaaacgagtg--tccaaacataa-tcaattcacctcaaattcacttttaaccaaaatcaattctctcaaactcaattttat 31562680  T
Q  102 caaaatcaatt 112  Q
    |||||||||||    
T  31562679 caaaatcaatt 31562669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 41580772 - 41580692
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| |||| |||| ||||  ||||||||||||| ||||||||||||||  ||||||||||| |||||||||||||    
T  41580772 atccaaacataaattaatttacatcaaactcacttttaaccaaaatcaattctctcaaactcaattcgatcaaaatcaatt 41580692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 43436370 - 43436290
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctc 85  Q
    ||||| |||| |||||||||| |||||||| ||||| ||||||||| ||||  || |||||||||||||||||||||||||    
T  43436370 tcatatgaattacttttaaatgagtgcatcaaaacataaatcaatttacatctaattcacttttaatcaaaatcaattctc 43436290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 18511123 - 18511228
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaa 106  Q
    |||||||||| ||||| |||  || ||||||||| ||||||||| ||||| || |||||||||| ||||||||||| |   ||| |||||| ||||||||    
T  18511123 ataagaatcatttttacattgatgtatccaaacataaatcaattaacatttaaatcacttttaaccaaaatcaattatatcaaaatcaattttatcaaaa 18511222  T
Q  107 tcaatt 112  Q
    ||||||    
T  18511223 tcaatt 18511228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 42516027 - 42515958
Alignment:
Q  43 aatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    |||||||||||||  |||||||||||||  |||||||||||||  |||||||||| ||||||||||||||    
T  42516027 aatcaattcacatcaaactcacttttaactaaaatcaattctctcaaactcaattatatcaaaatcaatt 42515958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 144
Target Start/End: Original strand, 12110920 - 12111031
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaa 131  Q
    ||||||||| |||||| || | ||||||||||||||||| ||||||||||| |   ||| ||||||||||||||||||||| ||  | |||   ||||||    
T  12110920 atccaaacataaatcactttatattcaactcacttttaaccaaaatcaatt-tgacaaaatcaattctatcaaaatcaattttcgtcaccgcacaaccaa 12111018  T
Q  132 acacacacttaat 144  Q
    |||||||||||||    
T  12111019 acacacacttaat 12111031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 27911432 - 27911504
Alignment:
Q  12 aatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    |||||||||||||| |||  ||||||||| ||||||||||||||  ||||||||||||| |||| ||||||||    
T  27911432 aatcacttttaaatgagtatatccaaacataaatcaattcacatcaaactcacttttaaccaaactcaattct 27911504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 23358274 - 23358373
Alignment:
Q  2 aactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctat 101  Q
    ||||||| | |||||||||||||  |||| ||||||||| |||  | ||||  |  ||||||||||||||||||||||||||||  ||||||||||||||    
T  23358274 aactcatcacaatcacttttaaacaagtgtatccaaacataaactatttcatctcaaactcacttttaatcaaaatcaattctctcaaactcaattctat 23358373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 142
Target Start/End: Complemental strand, 34997295 - 34997188
Alignment:
Q  35 caaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaaca 134  Q
    |||||| |||||||||||||| ||| ||| ||||||  |||||||||| |   ||||| |||| |||||||||||||| ||||||| |  ||||||||||    
T  34997295 caaacataaatcaattcacatccaattcatttttaacaaaaatcaattttgtcaaactaaattttatcaaaatcaattttcaccgcagccaaaccaaaca 34997196  T
Q  135 cacactta 142  Q
    || |||||    
T  34997195 catactta 34997188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 114
Target Start/End: Complemental strand, 43858299 - 43858192
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaa 106  Q
    |||||||||||||| | | || |||||||||||| |||||||||     |||||||||||||   ||||||||||||   |||| |||||||||||||||    
T  43858299 ataagaatcactttcacaataatgcatccaaacataaatcaattattcatcaactcacttttgcccaaaatcaattcaattaaaatcaattctatcaaaa 43858200  T
Q  107 tcaattat 114  Q
    ||||||||    
T  43858199 tcaattat 43858192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 142
Target Start/End: Complemental strand, 26806317 - 26806208
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaa 131  Q
    ||||||||| |||||| ||  || |||||||||||||||||||||||||||||  |||| | ||||| | |||||||||||||   | ||| | ||||||    
T  26806317 atccaaacataaatcacttttcactcaactcacttttaatcaaaatcaattct-gtaaaattaattcaaccaaaatcaattattgtcaccgcgtaaccaa 26806219  T
Q  132 acacacactta 142  Q
    |||||||||||    
T  26806218 acacacactta 26806208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 23359992 - 23359927
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaatt 97  Q
    ||||||||| |||||| || ||||||||||||||||||| ||||||||||||| | ||| ||||||    
T  23359992 atccaaacataaatcactttacattcaactcacttttaaccaaaatcaattctaccaaaatcaatt 23359927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 38600502 - 38600425
Alignment:
Q  35 caaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    |||||| ||||||||| ||||  ||||||||||||| ||||||||||||||  ||||| ||||| |||||||| ||||    
T  38600502 caaacataaatcaatttacatcaaactcacttttaaccaaaatcaattctctcaaacttaattcgatcaaaattaatt 38600425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 27911493 - 27911545
Alignment:
Q  88 aaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    |||||||||||||||||||||||||||| ||||||   |||||||||||||||    
T  27911493 aaactcaattctatcaaaatcaattatcgccgccgccgaaccaaacacacact 27911545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 30599966 - 30599914
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    ||||||||| ||||||||| ||| ||||||||||||||| |||||||||||||    
T  30599966 atccaaacacaaatcaattgacactcaactcacttttaaccaaaatcaattct 30599914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 28641657 - 28641768
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||| |||| |||||||||||||| |    | ||||| | |||||||||||||| |||||||| ||||| ||||||||||||||  | | ||||||| |    
T  28641657 caacttataataatcacttttaaatgaagttacccaaatataaatcaattcacatccaactcacatttaaccaaaatcaattctctcagaatcaattcaa 28641756  T
Q  101 tcaaaatcaatt 112  Q
    | ||||||||||    
T  28641757 ttaaaatcaatt 28641768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 112
Target Start/End: Complemental strand, 23267400 - 23267346
Alignment:
Q  58 aactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| ||| |||||||||||| |  |||||||||||||||||||||||||    
T  23267400 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 23267346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 10918648 - 10918700
Alignment:
Q  31 catccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattc 83  Q
    |||||||||| |||||| || ||||||||||||||||||  ||||||||||||    
T  10918648 catccaaacataaatcactttacattcaactcacttttatccaaaatcaattc 10918700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 11759848 - 11759801
Alignment:
Q  35 caaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    |||||| ||| ||||| || ||||||||||||||||||||||||||||    
T  11759848 caaacacaaaccaatttaccttcaactcacttttaatcaaaatcaatt 11759801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 18970376 - 18970245
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    ||||||| |||||||||| |  |||||||| ||||| || |||||| ||    ||||||||||||| ||||||||||| || |   ||||||||||||||    
T  18970376 tcataaggatcacttttatacgagtgcatcaaaacataagtcaatttacgca-aactcacttttaaccaaaatcaattatcttc--ctcaattctatcaa 18970280  T
Q  105 aatcaattatcaccgccgtgaaaccaaacacacac 139  Q
    ||||||||  || | | || |||||||||||||||    
T  18970279 aatcaatttccatcacagtcaaaccaaacacacac 18970245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 42770487 - 42770408
Alignment:
Q  4 ctcataagaatcacttttaaattagtgc-atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    |||||||||||||||||||  |||  |  ||||||||| | |||||||  ||||||||||||||||||||||||| ||||    
T  42770487 ctcataagaatcacttttatcttaaagatatccaaacatagatcaattttcattcaactcacttttaatcaaaatgaatt 42770408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 23377550 - 23377600
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||||||| ||||||| | ||||||||||||||||||| |||||| ||||    
T  23377550 atccaaacataaatcaacttacattcaactcacttttaaccaaaattaatt 23377600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 11240720 - 11240796
Alignment:
Q  35 caaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    |||||| ||||||||||||||||||||| |||||  || ||||||||| |  ||||| |||||  |||||||||||||    
T  11240720 caaacataaatcaattcacattcaactcgctttt-ttccaaatcaattttgttaaacccaattaaatcaaaatcaatt 11240796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 44148804 - 44148845
Alignment:
Q  41 aaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||||||||||| |||||| |||||||| ||||||||||||    
T  44148804 aaaatcaattcacgttcaacacacttttagtcaaaatcaatt 44148845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 1763270 - 1763345
Alignment:
Q  36 aaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||| |||||| || | |||||||||| |||||| ||||||||||| | | ||| |||||| ||||||||||||||    
T  1763270 aaacataaatcactttaaattcaactcaattttaaccaaaatcaattttac-aaaatcaattttatcaaaatcaatt 1763345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 7e-39; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 3467551 - 3467688
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    ||||||||||||||||||||| | |  ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  3467551 tcataagaatcacttttaaataaatatatccaaacagaaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaa 3467650  T
Q  105 aatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    |||||||| || || |||  | ||||||||||||||||    
T  3467651 aatcaattctcgccaccgccataccaaacacacactta 3467688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 440283 - 440145
Alignment:
Q  2 aactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctat 101  Q
    ||||||||||||||| |||||| | | || ||||||||| |||||||||||||| |||||||| ||||| ||||||||||||||  | ||||||||||||    
T  440283 aactcataagaatcatttttaactgaatgtatccaaacataaatcaattcacatccaactcacatttaaccaaaatcaattctctcagactcaattctat 440184  T
Q  102 caaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    |||||||||||||| |||||||  |||||||||||||||    
T  440183 caaaatcaattatctccgccgtccaaccaaacacacact 440145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 25698054 - 25697944
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||||| |||  ||||||||| || ||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||    
T  25698054 caactcataagaatcacttttaaataagtttatccaaacataa-tcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaattcta 25697956  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  25697955 tcaaaatcaatt 25697944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 36114135 - 36113999
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||||  |||| ||||||||| ||  ||||  ||||  |||| |||||||||||||||||||||||  |||||||||||||    
T  36114135 caactcataagaatcacttttaaacgagtgtatccaaacataac-caatctacatcaaacttacttttaatcaaaatcaattctctcaaactcaattcta 36114037  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacaca 138  Q
    |||||||||||| |||||||||| | ||||||||||||    
T  36114036 tcaaaatcaattctcaccgccgtcataccaaacacaca 36113999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 25497717 - 25497816
Alignment:
Q  12 aatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaat 111  Q
    |||||||||||||| |||| ||||||||| || ||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  25497717 aatcacttttaaataagtgtatccaaacataa-tcaattcacatccaactcacttttaaccaaaatcaattctcctaaactcaattttatcaaaatcaat 25497815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 26243138 - 26243274
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||||  | |  ||||||||| ||||||||||| ||  |||||||||||||  ||||||||||||| ||||||||||||||    
T  26243138 caactcataagaatcacttttaaacaattatatccaaacataaatcaattcatatcaaactcacttttaacaaaaatcaattctcttaaactcaattcta 26243237  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacac 137  Q
    |||||||||||| |||| ||||  | |||||||||||    
T  26243238 tcaaaatcaattctcactgccgctataccaaacacac 26243274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 3097301 - 3097162
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||| | |||  ||||||||| ||||||||||| ||  ||||||||||||| ||||||||||||||  |||||||||||||    
T  3097301 caactcataagaatcacttttaagtgagtatatccaaacataaatcaattcatatcaaactcacttttaaccaaaatcaattctctcaaactcaattcta 3097202  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    ||||||| |||| ||||| | |  | ||||||||||||||    
T  3097201 tcaaaattaattctcaccactgctataccaaacacacact 3097162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 22936880 - 22936749
Alignment:
Q  9 aagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatc 108  Q
    ||||||||||| |||   |||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  ||||| |||||||||||||||    
T  22936880 aagaatcacttctaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaacttaattctatcaaaatc 22936781  T
Q  109 aattatcaccgccgtgaaaccaaacacacact 140  Q
    |||| || || |||  | ||||||||||||||    
T  22936780 aattctcgccaccgccataccaaacacacact 22936749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 41289147 - 41289016
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaa 106  Q
    ||||||||||||||||    |||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||| ||||||    
T  41289147 ataagaatcacttttagtaaagtgtatccaaacataaatcaattcacaatcaactcacttttaattaaaatcaattctctcaaactcaattctgtcaaaa 41289048  T
Q  107 tcaattatcaccgccgtgaaaccaaacacaca 138  Q
    |||||| || ||||||  ||||||||| ||||    
T  41289047 tcaattctcgccgccgccaaaccaaacccaca 41289016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 6399203 - 6399061
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||| | |||| ||| ||||| ||||||||||||||  ||||||||||||| || ||||||||||   |||||||||||||    
T  6399203 caactcataagaatcacttttaagtgagtgtatcgaaacataaatcaattcacatcaaactcacttttaaccataatcaattctatcaaactcaattcta 6399104  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacacttaa 143  Q
     || ||||||||| | | ||||  |||||||||||||||||||    
T  6399103 ccagaatcaattaactctgccgccaaaccaaacacacacttaa 6399061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 24897682 - 24897547
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||||| |||||||| | || ||||||||| || ||| |||| || |||||||||||||| |||||||||||||| ||||||||||| ||    
T  24897682 caactcataagaatcaattttaaataaatgtatccaaacataattca-ttcatatccaactcacttttaaccaaaatcaattctcataaactcaatttta 24897584  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacac 137  Q
    |||||||||||| | |||||||  | |||||||||||    
T  24897583 tcaaaatcaattcttaccgccgccataccaaacacac 24897547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 28425567 - 28425428
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||| |||   |||| ||||||||| |||||||||||| |  ||||||||||||| |||||||||||||   ||| |||||||||    
T  28425567 caactcataagaatcacttgtaagaaagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctaacaaaatcaattcta 28425468  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    |||||||||||| || || |||| | ||||||||||||||    
T  28425467 tcaaaatcaattttcgccaccgtcataccaaacacacact 28425428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 38114459 - 38114597
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||||||||  ||   |||| ||||||||| || ||||||||||| ||||| |||||||| ||||||||||||||  |||||||||||||    
T  38114459 caactcataagaatcacttgaaaccgagtgtatccaaacataa-tcaattcacatccaacttacttttaaccaaaatcaattctctcaaactcaattcta 38114557  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    ||||||| |||| ||||| |||  ||||||||||||||||    
T  38114558 tcaaaataaattctcaccaccgccaaaccaaacacacact 38114597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 40742388 - 40742272
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||||||||  | ||||||| ||||||||| ||||||||||| ||  |||||||||||||  ||||||||||||  ||||||||||||||    
T  40742388 caactcataagaatcactt--acattagtgtatccaaacataaatcaattcagatcaaactcacttttaacgaaaatcaattcttttaaactcaattcta 40742291  T
Q  101 tcaaaatcaattatcaccg 119  Q
    |||||||||||| ||||||    
T  40742290 tcaaaatcaattctcaccg 40742272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 4941876 - 4941765
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||| ||||||||| | |  ||||||||| |||||||||||| |  ||||||||||||||||||||||||||||  |||||||||| ||    
T  4941876 caactcataagaatcgcttttaaataattttatccaaacataaatcaattcacctcaaactcacttttaatcaaaatcaattctctcaaactcaattata 4941777  T
Q  101 tcaaaatcaatt 112  Q
    ||| ||||||||    
T  4941776 tcagaatcaatt 4941765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 44926855 - 44926965
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||||  |||| ||||||||| || ||||||||| |  ||||||||||||| ||||||||||||||  |||||||||||||    
T  44926855 caactcataagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattcta 44926953  T
Q  101 tcaaaatcaatt 112  Q
    ||||| ||||||    
T  44926954 tcaaactcaatt 44926965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 42143459 - 42143318
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||||| |||  ||||||||| |||||||||||| |  |||||||||||||  |||||||||| ||  |||||||||| ||    
T  42143459 caactcataagaatcacttttaaataagtttatccaaacataaatcaattcacctcaaactcacttttaactaaaatcaattttctcaaactcaattata 42143360  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    ||| |||||||| || || |||  | ||||||||||| ||||    
T  42143359 tcataatcaattctcgccaccgccataccaaacacactctta 42143318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 8124985 - 8125099
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||| |||||||||||||||||| |||| ||||||||| || |||||||||||  ||||||||| ||| ||||||||||||||  |||||| |||| |    
T  8124985 caactcctaagaatcacttttaaatgagtgtatccaaacataa-tcaattcacatcaaactcacttctaaccaaaatcaattctctcaaactcgattcaa 8125083  T
Q  101 tcaaaatcaattatca 116  Q
     |||||||||||||||    
T  8125084 ccaaaatcaattatca 8125099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 27649760 - 27649870
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||||| |||| ||| ||||| |  |||||||| || ||| |||||||||| |||||||||||||   |||||||||||||    
T  27649760 caactcataagaatcacttttaaatgagtgtatctaaacatat-tcaattcatatccaaatcacttttaaccaaaatcaattctttcaaactcaattcta 27649858  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  27649859 tcaaaatcaatt 27649870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 31246404 - 31246273
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaa 106  Q
    |||||||||||||||   |||  | ||||||||| |||||||||||||||||||||||||||||  ||||||||||||   ||| |||||||| ||||||    
T  31246404 ataagaatcacttttgctttaaggtatccaaacataaatcaattcacattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaa 31246305  T
Q  107 tcaattatcaccgccgtgaaaccaaacacaca 138  Q
    ||||||||| || |||   |||||||||||||    
T  31246304 tcaattatctccaccgcagaaccaaacacaca 31246273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 40742138 - 40742236
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattct 99  Q
    |||||||||||||||| |||||    |||| ||||||||| |||||||||||||| |||||||||||||| ||||||||||||||  ||||||||||||    
T  40742138 caactcataagaatcaattttattaaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattct 40742236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 36121598 - 36121529
Alignment:
Q  43 aatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    |||| ||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  36121598 aatctattcacattcaactcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatcaatt 36121529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 15206717 - 15206821
Alignment:
Q  8 taagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaat 107  Q
    |||||||||||| ||| | | || ||||||||| ||||||||||||||||||||||||||||  ||||||||||| |   ||||||||||||||||||||    
T  15206717 taagaatcacttctaagtcaatgtatccaaacataaatcaattcacattcaactcacttttacccaaaatcaattttgtcaaactcaattctatcaaaat 15206816  T
Q  108 caatt 112  Q
     ||||    
T  15206817 taatt 15206821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 30085674 - 30085596
Alignment:
Q  61 tcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaacacacac 139  Q
    |||||||||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||  | |||||||||||||    
T  30085674 tcacttttaaccaaaatcaattctcttaaactcaattatatcaaaatcaattctcaccgccgctataccaaacacacac 30085596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 33627128 - 33627018
Alignment:
Q  2 aactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctat 101  Q
    |||||||||||||||||||||    |||| ||||||||| ||||||||||  || ||||||| ||||||  ||||||||||||   ||||||||||||||    
T  33627128 aactcataagaatcacttttagtaaagtgtatccaaacataaatcaattcttatccaactcagttttaaataaaatcaattctttcaaactcaattctat 33627029  T
Q  102 caaaatcaatt 112  Q
    |||||||||||    
T  33627028 caaaatcaatt 33627018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 43550913 - 43550986
Alignment:
Q  9 aagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    |||||||||||||||   |||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  43550913 aagaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 43550986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 30759359 - 30759289
Alignment:
Q  42 aaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    |||||||||||||| |||||||||||||| ||||||||||||||  |||||||||| ||| ||||||||||    
T  30759359 aaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattatattaaaatcaatt 30759289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 42149019 - 42149100
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||||||| ||||||||||||||| |||  ||||||||| |||||||||||| |  ||||||||||||| |||||||||||    
T  42149019 caactcatacgaatcacttttaaataagtctatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaatt 42149100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 36779436 - 36779515
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| |||| | || ||||||||||||||||||||||||||||||||| | ||| |||||| ||||||||||||||    
T  36779436 atccaaacataaattactttacattcaactcacttttaatcaaaatcaattctac-aaaatcaattatatcaaaatcaatt 36779515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 112
Target Start/End: Complemental strand, 3619157 - 3619053
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaa 106  Q
    |||||||||||||| | |||| || ||||||||| |||||||||  || ||||||||||||| |||| |||||||||    ||| |||||||||||||||    
T  3619157 ataagaatcactttcatattaatgtatccaaacacaaatcaatt-tcactcaactcacttttgatcagaatcaattcattcaaaatcaattctatcaaaa 3619059  T
Q  107 tcaatt 112  Q
    ||||||    
T  3619058 tcaatt 3619053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 38152269 - 38152137
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||||| |||||| | | |   |||||||| ||||||||| ||||  |||||||||| | | |||||||||| ||  ||||| |||||||    
T  38152269 caactcataagaatcatttttaagtaaatatttccaaacataaatcaatttacatcaaactcactttaact-aaaatcaattttctcaaacttaattcta 38152171  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaaca 134  Q
    |||||||||||| ||||||||   ||||||||||    
T  38152170 tcaaaatcaattctcaccgccaccaaaccaaaca 38152137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 114
Target Start/End: Complemental strand, 22552829 - 22552722
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaa 106  Q
    |||| ||||||||||| | || |||||||||||| |||||||||  |  ||||||||||||||  ||||||||||||   |||| |||||| | ||||||    
T  22552829 ataataatcacttttacaataatgcatccaaacataaatcaattttccatcaactcacttttatccaaaatcaattcaattaaaatcaattatgtcaaaa 22552730  T
Q  107 tcaattat 114  Q
    ||||||||    
T  22552729 tcaattat 22552722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 26490953 - 26491043
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaatt 97  Q
    ||||||||||||| || || |  | ||||||||| ||||||||| ||| ||||||||||||||| ||||||||||||| | ||| ||||||    
T  26490953 ataagaatcacttctatataaaggtatccaaacacaaatcaatttacactcaactcacttttaaccaaaatcaattctaccaaaatcaatt 26491043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 23018116 - 23018209
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||||  ||| ||| ||||||||| |||| |||| | | ||||||||||||| ||||||||||||||    |||||||||||||    
T  23018116 ataagaatcacttttgcattcgtgtatccaaacataaataaatttatactcaactcacttttgatcaaaatcaattcgatcaaactcaattcta 23018209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 35550264 - 35550372
Alignment:
Q  30 gcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaacc 129  Q
    |||||||||||||||||| || ||| | ||||||||||| || |||||||||| | | ||| ||||||| ||||||||||||| || || |||  ||| |    
T  35550264 gcatccaaacaaaaatcactttacactaaactcacttttgataaaaatcaattttac-aaaatcaattcaatcaaaatcaattttcgccaccgcaaaatc 35550362  T
Q  130 aaacacacac 139  Q
    ||||||||||    
T  35550363 aaacacacac 35550372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 26125840 - 26125888
Alignment:
Q  70 atcaaaatcaattctcctaaactcaattctatcaaaatcaattatcacc 118  Q
    |||||||||||||||| ||||||||||||||||||||| |||| |||||    
T  26125840 atcaaaatcaattctcttaaactcaattctatcaaaattaattctcacc 26125888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 30081714 - 30081635
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| |||||||||||| || |||||||||||||  |||||||||| ||  ||| |||||| ||||||||||||||    
T  30081714 atccaaacataaatcaattcacttt-aactcacttttaactaaaatcaattttcacaaaatcaattttatcaaaatcaatt 30081635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 112
Target Start/End: Complemental strand, 3465478 - 3465424
Alignment:
Q  58 aactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| ||| |||||||||||| |  |||||||||||||||||||||||||    
T  3465478 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 3465424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 10552969 - 10552923
Alignment:
Q  36 aaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  10552969 aaacataaatcaatttacattcaactcacttttaaccaaaatcaatt 10552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 19649231 - 19649281
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||||||| |||||| || ||||||||||||||||||| |||||||||||    
T  19649231 atccaaacataaatcactttacattcaactcacttttaaccaaaatcaatt 19649281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 33588765 - 33588823
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaa 90  Q
    ||||||||| |||| | || ||||| ||||||||||||||||||||||||||| |||||    
T  33588765 atccaaacataaataattttacattaaactcacttttaatcaaaatcaattctactaaa 33588823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 34342942 - 34342873
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaat 77  Q
    ||||||||||||||||||| | |  ||||||||||||||||||||| | || |||||||||||| ||||||    
T  34342942 ataagaatcacttttaaataaatttatccaaacaaaaatcaattcata-tctactcacttttaaccaaaat 34342873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 112
Target Start/End: Complemental strand, 8702496 - 8702392
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaa 106  Q
    |||||||||||||| |   || || ||||||||| |||||||||  | ||||| ||| ||||||  |||||||||| | ||||| |||||||||||||||    
T  8702496 ataagaatcactttaaggataatgtatccaaacataaatcaattatc-ttcaaatcatttttaactaaaatcaattttgctaaagtcaattctatcaaaa 8702398  T
Q  107 tcaatt 112  Q
    ||||||    
T  8702397 tcaatt 8702392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 112
Target Start/End: Original strand, 29023307 - 29023348
Alignment:
Q  71 tcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    |||||||||||||||  |||||||||||||||||||||||||    
T  29023307 tcaaaatcaattctctcaaactcaattctatcaaaatcaatt 29023348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 35615733 - 35615834
Alignment:
Q  11 gaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaa 110  Q
    |||||| |||||| | | || ||| ||||| |||||||||| |||||||||||||| |   ||||||||||  |   |||||||||||||||||||||||    
T  35615733 gaatcaattttaagtgaatgtatctaaacataaatcaattcccattcaactcacttctttccaaaatcaatcttgtcaaactcaattctatcaaaatcaa 35615832  T
Q  111 tt 112  Q
    ||    
T  35615833 tt 35615834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 38335871 - 38335810
Alignment:
Q  14 tcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaa 75  Q
    ||||||||| || | || |||| |||| |||||||||||| |||||||||||||||||||||    
T  38335871 tcacttttacatgaatgtatccgaacacaaatcaattcaccttcaactcacttttaatcaaa 38335810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 8130191 - 8130088
Alignment:
Q  8 taagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaat 107  Q
    ||||||||||||| | |||| |||||||||||| |||| ||||  || |||||||||||| |||   |||||||||    ||| ||||||||||||||||    
T  8130191 taagaatcactttcatattaatgcatccaaacataaattaatt-tcactcaactcactttaaattcgaatcaattcattcaaaatcaattctatcaaaat 8130093  T
Q  108 caatt 112  Q
    |||||    
T  8130092 caatt 8130088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 144
Target Start/End: Complemental strand, 12124795 - 12124684
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaa 131  Q
    ||||||||| |||| | ||  ||||||||||||| |||||| ||||||||| | ||||| ||||||| | |||||||||||||   | ||||  ||||||    
T  12124795 atccaaacataaataacttttcattcaactcactattaatcgaaatcaattat-ctaaaatcaattcaaacaaaatcaattattttcaccgtataaccaa 12124697  T
Q  132 acacacacttaat 144  Q
    |||||||| ||||    
T  12124696 acacacacgtaat 12124684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26125586 - 26125634
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaat 49  Q
    |||||||||||||||| ||||| ||||||| ||||||||| ||||||||    
T  26125586 caactcataagaatcatttttacattagtgtatccaaacataaatcaat 26125634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 29970847 - 29970926
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| |||||| || | | |||||||||||||||  |||||||||| | | ||| |||||||||||||||||||||    
T  29970847 atccaaacataaatcactttaaactcaactcacttttaactaaaatcaattatac-aaattcaattctatcaaaatcaatt 29970926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 2071630 - 2071580
Alignment:
Q  33 tccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    ||||||||  |||||||| |||||||||||||||||| ||||||||||||||    
T  2071630 tccaaacatgaatcaatt-acattcaactcacttttagtcaaaatcaattct 2071580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 40792247 - 40792188
Alignment:
Q  53 cattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    |||||||||||||||||||||||||||||| |   ||| |||||| ||| ||||||||||    
T  40792247 cattcaactcacttttaatcaaaatcaattatatcaaaatcaattttattaaaatcaatt 40792188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 42600976 - 42601031
Alignment:
Q  42 aaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaatt 97  Q
    |||||||||||||||||||||||||| ||  ||||||||||||  |||| ||||||    
T  42600976 aaatcaattcacattcaactcactttgaacaaaaatcaattctgttaaaatcaatt 42601031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 101
Target Start/End: Complemental strand, 6876656 - 6876618
Alignment:
Q  63 acttttaatcaaaatcaattctcctaaactcaattctat 101  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  6876656 acttttaatcaaaatcaattctgttaaactcaattctat 6876618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 45147266 - 45147221
Alignment:
Q  95 attctatcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    |||||||||||||||||| |||||||||   |||||||||||||||    
T  45147266 attctatcaaaatcaattctcaccgccgccgaaccaaacacacact 45147221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 1836204 - 1836125
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| |||| | |||||||||||| ||||||  || |||||||||||| | ||| ||||||  |||||||||||||    
T  1836204 atccaaacataaataacttcacattcaacccactttagattaaaatcaattctac-aaaatcaatttaatcaaaatcaatt 1836125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 9695424 - 9695392
Alignment:
Q  52 acattcaactcacttttaatcaaaatcaattct 84  Q
    ||||||||||||||||||| |||||||||||||    
T  9695424 acattcaactcacttttaaacaaaatcaattct 9695392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 9908846 - 9908806
Alignment:
Q  42 aaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||||||| || ||||||||||||||||||||| ||||||    
T  9908846 aaatcaattaacgttcaactcacttttaatcaaagtcaatt 9908806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 34957552 - 34957508
Alignment:
Q  35 caaacaaaaatcaattcacattcaactcacttttaatcaaaatca 79  Q
    ||||| |||||||||| ||||| |||| |||||||||||||||||    
T  34957552 caaactaaaatcaattaacatttaactaacttttaatcaaaatca 34957508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 39219766 - 39219818
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    ||||||||| |||||| |||| ||| |||||||||||||  ||||||||||||    
T  39219766 atccaaacataaatcacttcatattaaactcacttttaacgaaaatcaattct 39219818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 42850315 - 42850175
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||||||||||||   |||| ||||||||| |||||||||||||| |||||||||||||| |||||||||||| | ||||||||||||||    
T  42850315 caactcataagaatcacttttaaggaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattcacttaaactcaattcta 42850216  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacactt 141  Q
    |||||||||||| || || |||  | |||||||||||||||    
T  42850215 tcaaaatcaattctcgccaccgccataccaaacacacactt 42850175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 27801744 - 27801609
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    ||||| |||| |||||||||| |||||||||||||| ||||||||| ||||  |||||||||||||||||||||||||||| |||| |||||||||||||    
T  27801744 tcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaattctatcaa 27801645  T
Q  105 aatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    |||||||| || || |||| | ||||||||||||||    
T  27801644 aatcaattctcgccaccgtcataccaaacacacact 27801609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 48510942 - 48511081
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    |||||||||||||||||||   |||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||  ||||||||||| |||||    
T  48510942 tcataagaatcacttttaagcaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattatctcaaactcaattcaatcaa 48511041  T
Q  105 aatcaattatcaccgccgtgaaaccaaacacacacttaat 144  Q
    |||||||| || ||||||  | ||||||||||||||||||    
T  48511042 aatcaattctcgccgccgccataccaaacacacacttaat 48511081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 20800363 - 20800229
Alignment:
Q  11 gaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaa 110  Q
    |||||||||||||   |||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  ||| |||||||||||||||||||    
T  20800363 gaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaa 20800264  T
Q  111 ttatcaccgccgtgaaaccaaacacacacttaatc 145  Q
    || || ||||||  | |||||||||||||||||||    
T  20800263 ttctccccgccgccataccaaacacacacttaatc 20800229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 43728973 - 43728829
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||||| |||  ||||||||| || ||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||    
T  43728973 caactcataagaatcacttttaaataagtttatccaaacataa-tcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaattcta 43728875  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacacttaatca 146  Q
    |||||||||||| || ||  ||  | ||||||||||||||||||||    
T  43728874 tcaaaatcaattctctccatcgctataccaaacacacacttaatca 43728829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 31223404 - 31223547
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||| ||    |||| ||||||||| |||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||    
T  31223404 caactcataagaatcacttctattaaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattcta 31223503  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacacttaat 144  Q
    | |||||||||| || || |||  ||||||||||||||||||||    
T  31223504 ttaaaatcaattctccccaccgccaaaccaaacacacacttaat 31223547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 47123416 - 47123527
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||| |||||||||||||||||   |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||  |||||||||||||    
T  47123416 caacttataagaatcacttttaacgaagtgtatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaattcta 47123515  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  47123516 tcaaaatcaatt 47123527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 35569288 - 35569159
Alignment:
Q  11 gaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaa 110  Q
    |||||||||||||   |||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  ||| |||||||||||||||||||    
T  35569288 gaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaa 35569189  T
Q  111 ttatcaccgccgtgaaaccaaacacacact 140  Q
    || || ||||||  | ||||||||||||||    
T  35569188 ttctccccgccgccataccaaacacacact 35569159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 26058275 - 26058410
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    ||||| |||| |||||||||| |||||||||||||| ||||||||| ||||  || ||||||||||||||||||||||||| |||| |||||||||||||    
T  26058275 tcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaattcacttttaatcaaaatcaattctcttaaaatcaattctatcaa 26058374  T
Q  105 aatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    |||||||| || || |||  | ||||||||||||||    
T  26058375 aatcaattctcgccaccgccataccaaacacacact 26058410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 1199865 - 1199998
Alignment:
Q  9 aagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatc 108  Q
    ||||||||||| |||   |||| ||||||||| ||||||||||||||||||||||||||||| |||||| |||||||  |||||||||||||||||||||    
T  1199865 aagaatcacttctaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaatc 1199964  T
Q  109 aattatcaccgccgtgaaaccaaacacacactta 142  Q
    |||| || || |||  | ||||||||||||||||    
T  1199965 aattctcgccaccgccataccaaacacacactta 1199998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 6166140 - 6166280
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||| |||||||||||||||||| |||| ||||||||| || |||||||| ||  ||||||||| ||| ||||||||||||||  ||| |||||||||    
T  6166140 caactcctaagaatcacttttaaatgagtgtatccaaacataa-tcaattcagatcaaactcacttctaaccaaaatcaattctctcaaattcaattcta 6166238  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    |||||||||||| ||||| ||| || ||||||||||||||||    
T  6166239 tcaaaatcaattctcaccaccgcgataccaaacacacactta 6166280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 50406160 - 50406301
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||| |||||||||| ||||||   |||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||   |||||||||| ||    
T  50406160 caacttataagaatcatttttaacgaagtgcatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaaatctttcaaactcaatttta 50406259  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    |||||||||||| || || |||  | ||||||||||||||||    
T  50406260 tcaaaatcaattctcgccaccgctataccaaacacacactta 50406301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 5410674 - 5410806
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    ||||||||||||||||||| | |||| || |||||| ||||||||| |||| ||||||||||||||||||||||||||||   ||| |||||| ||||||    
T  5410674 tcataagaatcacttttaagt-agtgtattcaaacataaatcaatttacatccaactcacttttaatcaaaatcaattctttcaaattcaattatatcaa 5410772  T
Q  105 aatcaattatcaccgccgtgaaaccaaacacaca 138  Q
    |||||||| || ||||||  ||||||||||||||    
T  5410773 aatcaattctcgccgccgccaaaccaaacacaca 5410806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 7826446 - 7826309
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    ||||||||||||||||||| | || | | ||||||| ||||||||||||||  | ||||||||||| ||||||||||||||  ||| |||||||||||||    
T  7826446 tcataagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaagctcacttttaaccaaaatcaattctctcaaaatcaattctatcaa 7826347  T
Q  105 aatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    |||||||| || || |||  ||||||||||||||||||    
T  7826346 aatcaattttctccaccgccaaaccaaacacacactta 7826309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 13056028 - 13056166
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||| |||||||||||| | || | || |||||| ||||||||||||| ||||||||||||||| |||||||||||||   |||||| ||||||    
T  13056028 caactcataaaaatcacttttaa-taagcgtattcaaacataaatcaattcacactcaactcacttttaaccaaaatcaattctttcaaactccattcta 13056126  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    ||||||||||||||| || |||  | ||||||||||||||    
T  13056127 tcaaaatcaattatcgccaccgccataccaaacacacact 13056166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 12247450 - 12247588
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||| |||||||||||||  |||| ||||||||| || | |||| |||| |||||||||||||| || ||||||||||| ||||||||||||||    
T  12247450 caactcataaaaatcacttttaaacaagtgtatccaaacataatt-aatttacatccaactcacttttaaccagaatcaattctcttaaactcaattcta 12247548  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    | |||||||||| ||| | |||  | ||||||||||||||    
T  12247549 ttaaaatcaattttcatcaccgctataccaaacacacact 12247588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 36205223 - 36205357
Alignment:
Q  3 actcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatc 102  Q
    |||| |||||||||||||||||| |||  |||||| |||||| ||||||| ||  ||| ||||||||||||||||||||||||  |||||||||||  |     
T  36205223 actcgtaagaatcacttttaaataagtttatccaatcaaaaaccaattcatatctaacccacttttaatcaaaatcaattctctcaaactcaattccgtt 36205322  T
Q  103 aaaatcaattatcaccgccgtgaaaccaaacacac 137  Q
    |||||||||| ||||| |||| | |||||||||||    
T  36205323 aaaatcaattctcaccaccgtcataccaaacacac 36205357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 45710079 - 45710192
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||| ||    |||| || ||||| | ||||||||||||| ||||||||||||||||||||||||||| |  |||||||||||||    
T  45710079 caactcataagaatcacttctagtaaagtgtattcaaac-ataatcaattcacatacaactcacttttaatcaaaatcaattcactcaaactcaattcta 45710177  T
Q  101 tcaaaatcaattatc 115  Q
    |||||||||||||||    
T  45710178 tcaaaatcaattatc 45710192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 10470661 - 10470730
Alignment:
Q  43 aatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  10470661 aatcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaatt 10470730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 25230037 - 25230173
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||| ||||||||||||| ||    |||| ||||||||| || ||||||||||||||||||||||||||  |||||||||||||  ||||||| |||||    
T  25230037 caactaataagaatcacttctattaaagtgtatccaaacataa-tcaattcacattcaactcacttttaactaaaatcaattctctcaaactcagttcta 25230135  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacaca 138  Q
    |||||||||||| || || |||| | ||||||||||||    
T  25230136 tcaaaatcaattctcgccaccgtcataccaaacacaca 25230173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 11023425 - 11023278
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||| ||| ||| |||||||| | | || ||||||||| || ||||||||| |  ||||||||||||| ||||||||||||||  |||||||||||||    
T  11023425 caactcgtaaaaattacttttaattgaatgtatccaaacataa-tcaattcacctaaaactcacttttaaccaaaatcaattctctcaaactcaattcta 11023327  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacacttaatcaatt 149  Q
    |||||||||||| ||||| |||  | |||||||||||| ||| ||||||    
T  11023326 tcaaaatcaattttcaccaccgccataccaaacacacatttagtcaatt 11023278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 34718485 - 34718622
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    |||||||||||||||||  |  |||| || |||||| ||||||||| | ||  ||||||||||||| |||||| |||| ||  |||||||||||||||||    
T  34718485 tcataagaatcacttttgtacaagtgtattcaaacataaatcaatttatatcaaactcacttttaaccaaaattaattatctcaaactcaattctatcaa 34718584  T
Q  105 aatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    |||||||| |  || |||| ||||||||||||||||||    
T  34718585 aatcaattttttccaccgtcaaaccaaacacacactta 34718622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 15884288 - 15884368
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| |||||||||||||| |||||||||||||| |||||||||||||   |||||||| ||||||||||||||||    
T  15884288 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctgtcaaactcaactctatcaaaatcaatt 15884368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 11561853 - 11561948
Alignment:
Q  2 aactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaatt 97  Q
    ||||||||||||||||||||||| ||||  || |||| | ||||||||||||||||||||||||||||| |||||| ||||||   ||||||||||    
T  11561853 aactcataagaatcacttttaaaatagtatattcaaatataaatcaattcacattcaactcacttttaaccaaaattaattctttcaaactcaatt 11561948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 12468242 - 12468380
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||| |||||||||||||  |||| ||||||| | ||||||||| ||||  ||||||||||||| ||||||||||| |   |||||||||||||    
T  12468242 caactcataaaaatcacttttaaaaaagtgtatccaaatataaatcaatttacatcaaactcacttttaaccaaaatcaattatatcaaactcaattcta 12468341  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    || ||||||||| |  ||||||  | ||||||||||||||    
T  12468342 tc-aaatcaattcttcccgccgccataccaaacacacact 12468380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 4369898 - 4369815
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctc 85  Q
    ||||||||||||||||||||||| | || | | ||||||| ||||||||||||| ||||||||||||||| ||||||||||||||    
T  4369898 caactcataagaatcacttttaagtgagggtacccaaacataaatcaattcaca-tcaactcacttttaaccaaaatcaattctc 4369815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 35536102 - 35536240
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||||  |||| ||| ||||| ||  |||||||| |  || ||||||||||||||||| |||||||  |||||||||||||    
T  35536102 caactcataagaatcacttttaaacgagtgtatctaaacataac-caattcacgtcaaagtcacttttaatcaaaattaattctctcaaactcaattcta 35536200  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    | ||||| |||| ||| | |||  | ||||||||||||||    
T  35536201 ttaaaattaattttcatcaccgccataccaaacacacact 35536240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 49243044 - 49242961
Alignment:
Q  35 caaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcacc 118  Q
    |||||| |||||||||||||| ||||||| |||||| ||||||||||||||  |||||||||| ||||||||| |||| |||||    
T  49243044 caaacataaatcaattcacatccaactcatttttaaccaaaatcaattctctcaaactcaattatatcaaaattaattctcacc 49242961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 50977433 - 50977295
Alignment:
Q  3 actcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatc 102  Q
    |||||||| |||||||| ||| | || | ||||||||| ||| |||||||||   ||||||||||||| |||||||||||||   |||||| ||||||||    
T  50977433 actcataaaaatcacttgtaa-taagcgtatccaaacataaaacaattcacaccaaactcacttttaaccaaaatcaattctttcaaactccattctatc 50977335  T
Q  103 aaaatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    |||||||||| || || |||  | ||||||||||||||||    
T  50977334 aaaatcaattctcgccaccgccataccaaacacacactta 50977295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 40229566 - 40229433
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||| ||||||||| | |||   |||| ||||||||| |||||||||||| |  ||||||||||||| ||||||||||||    ||| |||||||||    
T  40229566 caactcagaagaatcacctgtaagaaagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattccaacaaaatcaattcta 40229467  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaaca 134  Q
    |||||||||||| ||| | |||| | ||||||||    
T  40229466 tcaaaatcaattttcatcaccgtcataccaaaca 40229433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 291813 - 291729
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctc 85  Q
    |||||||||| |||||||||||||  |||| ||||||||| ||| |||||||  |  ||||||||||||||||||||||||||||    
T  291813 caactcataacaatcacttttaaacaagtgtatccaaacataaaccaattcatctcaaactcacttttaatcaaaatcaattctc 291729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 4347035 - 4347114
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| |||||| || ||||||||||||||||||| ||||||||||||| | ||| ||||||||| |||||||||||    
T  4347035 atccaaacataaatcactttacattcaactcacttttaaccaaaatcaattctac-aaaatcaattctaccaaaatcaatt 4347114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 43134532 - 43134591
Alignment:
Q  53 cattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| |||| ||||    
T  43134532 cattcaactcacttttaaccaaaatcaattctcttaaactcaattctatccaaataaatt 43134591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 23628795 - 23628706
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaatt 97  Q
    |||||||||| |||||  ||| || ||||||||| ||||||||| |||||||||||||||||| |||||||||||| ||  ||||||||||    
T  23628795 ataagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactcacttttagtcaaaatcaattatctcaaactcaatt 23628706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 13344836 - 13344916
Alignment:
Q  34 ccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatc 115  Q
    ||||||| |||||| || || |||||||||||||||| ||||||||||||| | ||| ||||||| ||||||||||||||||    
T  13344836 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaattctac-aaaatcaattcaatcaaaatcaattatc 13344916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 25061262 - 25061367
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaa 106  Q
    ||||||||||||||||  |||  | ||||||||| ||||||||| |  |||||||||||||||| ||||||||||||  | ||| |||||| || |||||    
T  25061262 ataagaatcacttttatgttaaggtatccaaacataaatcaatttatgttcaactcacttttaaccaaaatcaattcaaccaaaatcaattttaacaaaa 25061361  T
Q  107 tcaatt 112  Q
    ||||||    
T  25061362 tcaatt 25061367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 47085869 - 47085946
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    |||||||| ||||||| |||  |  ||| ||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  47085869 ataagaataacttttacatttataaatctaaacataaatcaattcacattcaactcacttttaattaaaatcaattct 47085946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 40352452 - 40352531
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| |||||| || ||||| ||||||||||||| |||||||||||| |  ||| |||||||||||||||||||||    
T  40352452 atccaaacataaatcactttacattaaactcacttttaaccaaaatcaattc-cacaaaatcaattctatcaaaatcaatt 40352531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 6061181 - 6061308
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    |||||||||||||||||||||    |||| |||| ||||||||| ||| || ||| |||||||   | | |||||||| ||  ||| |||||||||||||    
T  6061181 tcataagaatcacttttaaat----gcattcaaataaaaatcaactcatatccaattcactttacct-ataatcaattatctcaaattcaattctatcaa 6061275  T
Q  105 aatcaattatcaccgccgtgaaaccaaacacac 137  Q
    |||||||| ||||| |||| |||||||||||||    
T  6061276 aatcaattttcaccaccgtcaaaccaaacacac 6061308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 142
Target Start/End: Complemental strand, 7765348 - 7765239
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaa 131  Q
    |||||||||||||||| ||  ||| ||||||||||||| ||| |||||||| |  |||| ||||||||||||||||||||| ||  | |||   ||||||    
T  7765348 atccaaacaaaaatcacttttcatccaactcacttttattcataatcaattat-gtaaaatcaattctatcaaaatcaattctcgtcaccgcataaccaa 7765250  T
Q  132 acacacactta 142  Q
    |||||||||||    
T  7765249 acacacactta 7765239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 6464679 - 6464748
Alignment:
Q  43 aatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    |||||||||||||| ||||||||||||| |||||| || || |  |||||||||| ||||||||||||||    
T  6464679 aatcaattcacattaaactcacttttaaccaaaatgaactcactcaaactcaattatatcaaaatcaatt 6464748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 13931694 - 13931762
Alignment:
Q  43 aatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaat 111  Q
    |||||||||||||  |||||| |||||| ||||||||||| |   ||||||||||||||||||||||||    
T  13931694 aatcaattcacatcaaactcatttttaaacaaaatcaatttttggaaactcaattctatcaaaatcaat 13931762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 15576495 - 15576595
Alignment:
Q  12 aatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaat 111  Q
    |||||||||||| || ||  ||| ||||| ||| ||||| | ||  |||||||||||||| ||||||||||||| |||||||||||  || |||||||||    
T  15576495 aatcacttttaattttgtaaatcaaaacataaaacaattaatatctaactcacttttaattaaaatcaattctcttaaactcaatttaattaaaatcaat 15576594  T
Q  112 t 112  Q
    |    
T  15576595 t 15576595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 29441271 - 29441325
Alignment:
Q  58 aactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| ||| |||||||||||| |  |||||||||||||||||||||||||    
T  29441271 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 29441325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 43730109 - 43730059
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||||||| ||||||||| ||| ||||||||||||||| |||||||||||    
T  43730109 atccaaacacaaatcaattgacactcaactcacttttaaccaaaatcaatt 43730059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 41989 - 42066
Alignment:
Q  35 caaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    |||||| |||||||||||| |||||||||| ||| |  ||||||||||||   ||| |||||| ||||||||||||||    
T  41989 caaacataaatcaattcacgttcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 40709237 - 40709288
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    ||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||    
T  40709237 atccaaacataaatcaatt-acactcaactcactattaatcaaaatcaattct 40709288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 121
Target Start/End: Complemental strand, 36447715 - 36447653
Alignment:
Q  58 aactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgcc 121  Q
    ||||||||||| ||||||||||||||| | ||| | ||||| ||||||||||||| ||||||||    
T  36447715 aactcacttttgatcaaaatcaattctac-aaaattaattcaatcaaaatcaattttcaccgcc 36447653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 29759712 - 29759762
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||||||| |||||| || ||||||||||||||||||| || ||||||||    
T  29759712 atccaaacataaatcattttacattcaactcacttttaaccataatcaatt 29759762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 4192578 - 4192618
Alignment:
Q  42 aaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||||||  |||||||||||||||||| ||||||||||||    
T  4192578 aaatcaatctacattcaactcacttttattcaaaatcaatt 4192618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 34661946 - 34662009
Alignment:
Q  54 attcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcacc 118  Q
    |||||||||| ||||||||||| |||||||||  |||||||||| ||||||| | |||| |||||    
T  34661946 attcaactcatttttaatcaaa-tcaattctctcaaactcaattttatcaaacttaattttcacc 34662009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 47978427 - 47978375
Alignment:
Q  31 catccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattc 83  Q
    ||||||| || |||||| || ||||||||||||||||||  ||||||||||||    
T  47978427 catccaaccataaatcactttacattcaactcacttttacccaaaatcaattc 47978375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 10853362 - 10853224
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||| | |||  ||||||||| ||||||||| | ||| ||||||||||||| ||||||||||||||  |||||||||||||    
T  10853362 caactcataagaatcacttttaagtgagtatatccaaacataaatcaatttatattaaactcacttttaaccaaaatcaattctctcaaactcaattcta 10853263  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacac 139  Q
    |||||||||||| ||||| |||  | |||||||||||||    
T  10853262 tcaaaatcaattctcaccaccgctataccaaacacacac 10853224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 26519670 - 26519808
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||| |||| |||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||||||  |||||||||||||    
T  26519670 caactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaattcta 26519769  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacac 139  Q
    |||||||||||| || || |||  | |||||||||||||    
T  26519770 tcaaaatcaattctccccaccgctataccaaacacacac 26519808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 50664765 - 50664903
Alignment:
Q  2 aactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctat 101  Q
    ||||| |||||||||||| ||| |  ||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  50664765 aactcttaagaatcacttctaagtgtgtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctat 50664864  T
Q  102 caaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    ||||||||||| || || |||  | ||||||||||||||    
T  50664865 caaaatcaattctcgccaccgccataccaaacacacact 50664903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 23496354 - 23496462
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaa 131  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| ||  |||||  | |||||    
T  23496354 atccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcctcgccgccataccaa 23496453  T
Q  132 acacacact 140  Q
    |||||||||    
T  23496454 acacacact 23496462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 38172402 - 38172263
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||| ||    |||| ||||||||| |||||||||||||| | |||||||||||| ||||||||||||||  |||||||||||||    
T  38172402 caactcataagaatcacttctattaaagtgtatccaaacataaatcaattcacatcccactcacttttaaccaaaatcaattctctcaaactcaattcta 38172303  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    | |||||||||| || || |||  ||||||||||||||||    
T  38172302 ttaaaatcaattctccccaccgccaaaccaaacacacact 38172263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 20813152 - 20813296
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||| ||| |||  ||||||||||||||||||||| || |||||||||||||| ||||  ||||||||  |||||| ||||||    
T  20813152 caactcataagaatcacttttgaataagtatatccaaacaaaaatcaattcaaatccaactcacttttaaccaaacacaattctctcaaactc-attcta 20813250  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacacttaatca 146  Q
    |||||||||||| || || |||  | |||||||||||||| |||||    
T  20813251 tcaaaatcaattctctccaccgatataccaaacacacactcaatca 20813296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 35930744 - 35930861
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||| |||| || ||||||| |||||| || ||||||||||| ||  |||||||||||||| |||||||||||||  |||||||||||||    
T  35930744 caactcataagaatgacttatacattagtgtatccaagcataaatcaattcatatcaaactcacttttaataaaaatcaattctctcaaactcaattcta 35930843  T
Q  101 tcaaaatcaattatcacc 118  Q
    |||||||||||| |||||    
T  35930844 tcaaaatcaattctcacc 35930861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 3348249 - 3348360
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||| ||||||||   |||| ||||||||| ||||||||| |||| |||||||||| ||| |||||||||||| | ||||||||||||||    
T  3348249 caactcataagaattacttttaaggaagtgtatccaaacataaatcaatttacatccaactcacttctaaccaaaatcaattcacttaaactcaattcta 3348348  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  3348349 tcaaaatcaatt 3348360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 10334144 - 10334255
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||| |||||||    |||| ||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||  |||||||||||||    
T  10334144 caactcataagaattacttttagtaaagtgtatccaaacataaatcaattcatattcaactgacttttaaccaaaatcaattctctcaaactcaattcta 10334243  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  10334244 tcaaaatcaatt 10334255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 35425340 - 35425450
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||| |     |||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  35425340 caactcataagaatcacttctgttaaagtgtatccaaacataa-tcaattcacattcaactcacttttaatcaaaatcaattctctcaaactcaattcta 35425438  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  35425439 tcaaaatcaatt 35425450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 42475719 - 42475826
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    ||||||||||| |||||||   |||| || |||||||||||||||||||||  ||||||||||||||||||||||||||||  |||||||||||||| ||    
T  42475719 tcataagaatcgcttttaacaaagtgtattcaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaattctataaa 42475818  T
Q  105 aatcaatt 112  Q
    ||||||||    
T  42475819 aatcaatt 42475826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 142
Target Start/End: Complemental strand, 48189495 - 48189396
Alignment:
Q  43 aatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| || |||    ||||||||||||||||    
T  48189495 aatcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattatcgccaccgccctaccaaacacacactta 48189396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 52966904 - 52966765
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||| | || | | ||||||| ||||||||||||||  || |||||||||| ||||||||||||||  ||| |||||||||    
T  52966904 caactcataagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaaagtcacttttaaccaaaatcaattctctcaaaatcaattcta 52966805  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    |||||||||||| || || ||   ||||||||||||||||    
T  52966804 tcaaaatcaattttctccacctccaaaccaaacacacact 52966765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 53074911 - 53075029
Alignment:
Q  3 actcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatc 102  Q
    ||||||||||||||||||||| | |||| ||||||||| || ||||||||| |  ||||||||||||| ||||||||||||||  |||||||||| ||||    
T  53074911 actcataagaatcacttttaagtgagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattatatc 53075009  T
Q  103 aaaatcaattatcaccgccg 122  Q
    |||||||||| |||||||||    
T  53075010 aaaatcaattttcaccgccg 53075029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 4984592 - 4984726
Alignment:
Q  6 cataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaa 105  Q
    |||||||||||||||||||  |||| ||||||||| ||||||||||||||  ||||||||||||| ||||||||||| ||  ||| |||||| |||||||    
T  4984592 cataagaatcacttttaaacgagtgtatccaaacataaatcaattcacatctaactcacttttaaccaaaatcaattttctcaaattcaattatatcaaa 4984691  T
Q  106 atcaattatcaccgccgtgaaaccaaacacacact 140  Q
    ||||||| || || |||  | ||||||||||||||    
T  4984692 atcaattctccccaccgccataccaaacacacact 4984726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 42318336 - 42318449
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||||||||| |||  |||| ||||||||| || ||||||||| |  ||||||||||||| ||||||||||||||  |||||||||||||    
T  42318336 caactcataagaatcactttcaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattcta 42318434  T
Q  101 tcaaaatcaattatc 115  Q
    |||||||||||||||    
T  42318435 tcaaaatcaattatc 42318449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 15511470 - 15511330
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||| |||||||||||| | || | ||||||||| |||||||||||||  |||||||||||||| |||||||||||||   ||||||  |||||    
T  15511470 caactcataaaaatcacttttaa-taagcgtatccaaacataaatcaattcacacccaactcacttttaaccaaaatcaattctttcaaactccgttcta 15511372  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    ||||||||||||||| || |||  | ||||||||||||||||    
T  15511371 tcaaaatcaattatcgccaccgccataccaaacacacactta 15511330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 44224768 - 44224907
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||||||| | |||| ||||||||| ||||||||||| ||  ||||||||||||| || |||||||| ||  |||||||||||||    
T  44224768 caactcataagaatcacttttaagtgagtgtatccaaacataaatcaattcatatcaaactcacttttaaccataatcaattatctcaaactcaattcta 44224867  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
     |  |||||||| || ||||||  |||||||||| |||||    
T  44224868 ccggaatcaattctccccgccgccaaaccaaacaaacact 44224907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 44939509 - 44939372
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||| ||  | | || ||||||||| || |||||||| |||||||||||||||||||||||||||||| |  ||| |||||||||    
T  44939509 caactcataagaatcacttatag-taaatgtatccaaacataa-tcaattcatattcaactcacttttaatcaaaatcaattcactcaaattcaattcta 44939412  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    ||||||||||||||| || |||  | ||||||||||||||    
T  44939411 tcaaaatcaattatcgccaccgctataccaaacacacact 44939372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 8424824 - 8424712
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    ||||||||||||||||||| ||    |||| ||||||||| || ||||||||| |||||||||||||||| ||||||||||||||  |||||||||||||    
T  8424824 caactcataagaatcacttctattgaagtgtatccaaacataa-tcaattcacgttcaactcacttttaaccaaaatcaattctctcaaactcaattcta 8424726  T
Q  101 tcaaaatcaattat 114  Q
    ||||| ||||||||    
T  8424725 tcaaattcaattat 8424712  T

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Target: chr3; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 38125536 - 38125393
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||||||||||||| |||  |||| ||||||||| || ||||||||| |  ||| ||||||||| ||||||||||||||  ||| |||||||||    
T  38125536 caactcataagaatcactttcaaacaagtgtatccaaacataa-tcaattcacctcaaacccacttttaaccaaaatcaattctctcaaattcaattcta 38125438  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacacttaatc 145  Q
    |||||||||||| ||  | |||  | |||||||||||||||||||    
T  38125437 tcaaaatcaattctcgtcaccgccataccaaacacacacttaatc 38125393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 31084218 - 31084296
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    |||||||||||||||||||   |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31084218 tcataagaatcacttttaaga-agtgtatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattct 31084296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 142
Target Start/End: Original strand, 55154549 - 55154648
Alignment:
Q  43 aatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    ||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||| || || | |  | ||||||||||||||||    
T  55154549 aatcaattcacattcaactcacttttaactaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccactgccataccaaacacacactta 55154648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 21224996 - 21225133
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||| |||||||| |||||||   |||| ||||||||| | ||||||| ||||  ||||||||||||| ||||||||||||||  |||||||||||||    
T  21224996 caactcgtaagaatcgcttttaagaaagtgtatccaaacatatatcaatttacatcaaactcacttttaaccaaaatcaattctctcaaactcaattcta 21225095  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacaca 138  Q
    |  | ||||||| || ||||||  ||||||||||||||    
T  21225096 tagagatcaattctcgccgccgctaaaccaaacacaca 21225133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 30811585 - 30811516
Alignment:
Q  43 aatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||| |||||| ||||||||||||||    
T  30811585 aatcaattcacattcaactcacttttaatcaaaatcaattctctcaaattcaattatatcaaaatcaatt 30811516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 53179854 - 53179958
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||| |||||||||||||  |||| ||||||||| ||||||||| ||||  ||||||||||||| ||||||||||| |   |||||||||||||    
T  53179854 caactcataaaaatcacttttaaaaaagtgtatccaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattatataaaactcaattcta 53179953  T
Q  101 tcaaa 105  Q
    |||||    
T  53179954 tcaaa 53179958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 139
Target Start/End: Original strand, 38340842 - 38340949
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaa 131  Q
    ||||||||| |||||||||||||| |||||||||||||| |||||||||||||   |||||  |||||||||||||||||| |||||  ||  | |||||    
T  38340842 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctttcaaacttcattctatcaaaatcaattctcaccaacgccataccaa 38340941  T
Q  132 acacacac 139  Q
    ||||||||    
T  38340942 acacacac 38340949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 19877458 - 19877558
Alignment:
Q  36 aaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaacac 135  Q
    ||||| ||||||||| |||| |||||||||||||| |||||||||||||   |||||||||||||||||||| |||| ||  |||||| ||| |||||||    
T  19877458 aaacataaatcaatttacatccaactcacttttaaccaaaatcaattctttcaaactcaattctatcaaaataaattttcgtcgccgtcaaatcaaacac 19877557  T
Q  136 a 136  Q
    |    
T  19877558 a 19877558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 34561145 - 34561225
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||||||| |   ||||| |||||||||||||||||||    
T  34561145 atccaaacataaatcaattcgcattcaactcacttttaaccaaaatcaattttatcaaacttaattctatcaaaatcaatt 34561225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 23207162 - 23207052
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||| |||||||| ||||  |||| ||||||||| ||||||||||||||  |||||| |||||| ||||||||||| |   ||| |||||| ||    
T  23207162 caactcataa-aatcacttgtaaaaaagtgtatccaaacataaatcaattcacatcaaactcatttttaaccaaaatcaattataacaaaatcaattata 23207064  T
Q  101 tcaaaatcaatt 112  Q
    ||||||||||||    
T  23207063 tcaaaatcaatt 23207052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 49526758 - 49526681
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    |||||||||| ||||| || | || ||||||||| ||||||||| ||| |||| ||||||||||||||||||||||||    
T  49526758 ataagaatcaattttacatgaatgtatccaaacataaatcaatttacaatcaattcacttttaatcaaaatcaattct 49526681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 40415360 - 40415280
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| |||| |||| |||| ||||||||||||||  |||||| ||||   ||||||||||||||||||||||||||    
T  40415360 atccaaacataaattaatttacatccaactcacttttaactaaaatcgattcctttaaactcaattctatcaaaatcaatt 40415280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 138
Target Start/End: Complemental strand, 16246157 - 16246054
Alignment:
Q  33 tccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaa 132  Q
    |||||||| ||||||||| ||||  |||||||||||||  |||||||||||||  |||||||||||||| || ||||||| || |  |||  ||||||||    
T  16246157 tccaaacataaatcaatttacatctaactcacttttaactaaaatcaattctc--aaactcaattctattaatatcaattctcgctaccgccaaaccaaa 16246060  T
Q  133 cacaca 138  Q
    ||||||    
T  16246059 cacaca 16246054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 29716740 - 29716674
Alignment:
Q  42 aaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatc 108  Q
    ||||||||||| ||| ||||||||||||| ||||||||||||||  ||| |||||| ||||||||||    
T  29716740 aaatcaattcatatttaactcacttttaaccaaaatcaattctctcaaattcaattttatcaaaatc 29716674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 25848039 - 25848136
Alignment:
Q  2 aactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattct 99  Q
    ||||||||||||||| |||||| | |  | ||||||||| ||||||||||| ||| ||||||||||| | |||||| |||| ||  ||||||||||||    
T  25848039 aactcataagaatcatttttaagtgaaggtatccaaacataaatcaattcatattaaactcactttttaccaaaattaattttctcaaactcaattct 25848136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 7012677 - 7012729
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    ||||||||| |||||| || ||||||||||||||||||| |||||||||||||    
T  7012677 atccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct 7012729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 14651161 - 14651086
Alignment:
Q  36 aaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||| ||||||||| | |||||||||||||||||||||||||||||||   ||| |||||| ||| ||||||||||    
T  14651161 aaacacaaatcaatt-atattcaactcacttttaatcaaaatcaattctatcaaaatcaattttattaaaatcaatt 14651086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 25181247 - 25181326
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| |||| | || ||||| ||||||||||||||||||||||||||| | ||| ||||||| ||||| |||||||    
T  25181247 atccaaacataaataattttacattaaactcacttttaatcaaaatcaattctac-aaaatcaattcaatcaatatcaatt 25181326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 42644299 - 42644379
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| |||||| || |||||||||||||||||||  |||||||||| |  |||| |||||||  ||||||||||||    
T  42644299 atccaaacataaatcactttacattcaactcacttttaactaaaatcaatttttataaaatcaattcactcaaaatcaatt 42644379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 21023275 - 21023199
Alignment:
Q  36 aaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattat 114  Q
    ||||| |||||| |||| ||||||||||| ||||| ||||||||||| | |  || |||||||||||||||||||||||    
T  21023275 aaacataaatcacttcaaattcaactcacatttaaccaaaatcaattttac--aaatcaattctatcaaaatcaattat 21023199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 52813278 - 52813332
Alignment:
Q  58 aactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| ||| |||||||||||| |  |||||||||||||||||||||||||    
T  52813278 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 52813332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 85
Target Start/End: Complemental strand, 30301233 - 30301200
Alignment:
Q  52 acattcaactcacttttaatcaaaatcaattctc 85  Q
    ||||||||||||||||||||||||||||||||||    
T  30301233 acattcaactcacttttaatcaaaatcaattctc 30301200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 10852775 - 10852727
Alignment:
Q  34 ccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||||| |||||| || ||||||||||||||||||| |||||||||||    
T  10852775 ccaaacataaatcactttacattcaactcacttttaaccaaaatcaatt 10852727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 44225602 - 44225681
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| |||||| || ||||| |||||||||||||  |||||||||||| | ||| |||||| ||| ||||||||||    
T  44225602 atccaaacataaatcactttacattaaactcacttttaacgaaaatcaattctac-aaaatcaattatattaaaatcaatt 44225681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 53567969 - 53568048
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| |||| | ||  |||||||||||||||||||||||||||||| |  |||| |||||||  ||||||||||||    
T  53567969 atccaaacataaattacttttcattcaactcacttttaatcaaaatcaatt-ttgtaaaatcaattcactcaaaatcaatt 53568048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 30810034 - 30809959
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    ||||||||||||||||| | || | |  ||| || ||||||||||||||| ||||||||||||| |||| ||||||    
T  30810034 ataagaatcacttttaagtaagcgtaatcaatcataaatcaattcacatttaactcacttttaaccaaactcaatt 30809959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 22737055 - 22737121
Alignment:
Q  36 aaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatc 102  Q
    ||||| ||||||||| |||||| ||| |||||||| ||||||||||| |   |||||||||||||||    
T  22737055 aaacataaatcaatttacattctacttacttttaaccaaaatcaattttttcaaactcaattctatc 22737121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 23918881 - 23918931
Alignment:
Q  34 ccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    ||||||| |||||| || ||||||||||||||||||| |||||| ||||||    
T  23918881 ccaaacataaatcactttacattcaactcacttttaaccaaaattaattct 23918931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 30736172 - 30736213
Alignment:
Q  43 aatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    ||||||||||||| ||||||||||||||  ||||||||||||    
T  30736172 aatcaattcacatacaactcacttttaactaaaatcaattct 30736213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 32523329 - 32523276
Alignment:
Q  29 tgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    |||||||||||| |||||| || |  ||||||| ||||||||||||||||||||    
T  32523329 tgcatccaaacacaaatcactttatcttcaactaacttttaatcaaaatcaatt 32523276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 38626750 - 38626787
Alignment:
Q  33 tccaaacaaaaatcaattcacattcaactcacttttaa 70  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  38626750 tccaaacataaatcatttcacattcaactcacttttaa 38626787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 29252186 - 29252138
Alignment:
Q  35 caaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattc 83  Q
    |||||| ||||||||| ||| | ||||||||||| ||||||||||||||    
T  29252186 caaacataaatcaatttacaattaactcacttttgatcaaaatcaattc 29252138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 31618420 - 31618368
Alignment:
Q  88 aaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    ||||||||||||||||||||||||| |  || |||| | ||||||||||||||    
T  31618420 aaactcaattctatcaaaatcaattcttcccaccgtcataccaaacacacact 31618368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31618982 - 31618930
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcac 53  Q
    ||||||||||||||||||| ||| | || | ||||||||| ||||||||||||    
T  31618982 caactcataagaatcacttctaagtgagagtatccaaacataaatcaattcac 31618930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 52736801 - 52736880
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| |||||| ||  |||| | |||||||||||||||||||| ||||  |||| ||||||| | |||||||||||    
T  52736801 atccaaacacaaatcacttttcattaacctcacttttaatcaaaatcacttct-ataaaatcaattcaaccaaaatcaatt 52736880  T

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Target: scaffold0005 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 253135 - 253273
Alignment:
Q  2 aactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctat 101  Q
    |||||||||||||||||||||| | |  | ||||||||| ||||||||||| || |||||||| ||||| ||||||||||||||  ||||||||||||||    
T  253135 aactcataagaatcacttttaactgaaggtatccaaacataaatcaattcatatccaactcacatttaaccaaaatcaattctctcaaactcaattctat 253234  T
Q  102 caaaatcaattatcaccgccgtgaaaccaaacacacact 140  Q
    ||||||||||| || ||||||   |||||||||||||||    
T  253235 caaaatcaattctctccgccgcccaaccaaacacacact 253273  T

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Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 219690 - 219797
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaa 131  Q
    ||||||||| |||||| ||  ||||||||||||||||||||||||| | || |  |||| ||||||| | |||||||||||||   | ||| | ||||||    
T  219690 atccaaacataaatcacttttcattcaactcacttttaatcaaaattagttat-gtaaaatcaattcaaccaaaatcaattattttcaccgcgtaaccaa 219788  T
Q  132 acacacact 140  Q
    |||||||||    
T  219789 acacacact 219797  T

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Target: scaffold0369 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 8455 - 8596
Alignment:
Q  1 caactcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattcta 100  Q
    |||||||||| ||||| |||||||  |||| ||||||||| ||||||||||||||  ||||||||||||| ||||||||||| |   |||||||||||||    
T  8455 caactcataaaaatcatttttaaaaaagtgtatccaaacataaatcaattcacatcaaactcacttttaaccaaaatcaattatatcaaactcaattcta 8554  T
Q  101 tcaaaatcaattatcaccgccgtgaaaccaaacacacactta 142  Q
    ||||||||||||||  || |||  | ||||||||||||||||    
T  8555 tcaaaatcaattattcccaccgccataccaaacacacactta 8596  T

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Target: scaffold0381 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 9119 - 9251
Alignment:
Q  3 actcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatc 102  Q
    |||||||||||||||||| || | |||| ||||||||| | | ||||||| ||  ||||||||||||||||||||||||||||  |||||||||||||||    
T  9119 actcataagaatcactttcaagtgagtgtatccaaacatata-caattcatatctaactcacttttaatcaaaatcaattctctcaaactcaattctatc 9217  T
Q  103 aaaatcaattatcaccgccgtgaaaccaaacaca 136  Q
    |||||||||| ||||| |||  | ||||||||||    
T  9218 aaaatcaattctcaccaccgccataccaaacaca 9251  T

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Target: scaffold0217 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 2111 - 1983
Alignment:
Q  12 aatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaat 111  Q
    ||||||||||| || |||||||||||||| ||||||||||| ||  |||||| ||| || |||||||||||||   ||||||||||||||||||||||||    
T  2111 aatcacttttatatgagtgcatccaaacataaatcaattcatatcaaactcattttgaaccaaaatcaattctttcaaactcaattctatcaaaatcaat 2012  T
Q  112 tatcaccgccgtgaaaccaaacacacact 140  Q
    ||||  | |||  || |||||||||||||    
T  2011 tatcgacaccgccaatccaaacacacact 1983  T

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Target: scaffold0007 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 43 - 139
Target Start/End: Complemental strand, 29176 - 29080
Alignment:
Q  43 aatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaacacacac 139  Q
    |||||||||||||||||||||||||||| |||||||||||||   ||||| ||||||||||||||||||||| ||| ||   |||||||||||||||    
T  29176 aatcaattcacattcaactcacttttaaccaaaatcaattctttcaaacttaattctatcaaaatcaattattaccaccaccaaaccaaacacacac 29080  T

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Target: scaffold0394 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 5887 - 5814
Alignment:
Q  39 caaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||  |||||||||| ||||||||||||||    
T  5887 caaacatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaatt 5814  T

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Target: scaffold0014 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 118501 - 118394
Alignment:
Q  5 tcataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaa 104  Q
    |||||||||||||||||  |  |||| ||||||||| ||||||||| ||||  |||||||||||||  |||||| |||||   ||||||||||| |||||    
T  118501 tcataagaatcacttttgtacaagtgtatccaaacataaatcaatttacatcaaactcacttttaacaaaaatctattctatcaaactcaattcgatcaa 118402  T
Q  105 aatcaatt 112  Q
    ||||||||    
T  118401 aatcaatt 118394  T

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Target: scaffold0983 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 2349 - 2252
Alignment:
Q  15 cacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||||  ||||  |||||||| |||||||||||| |  ||||||||||||| ||||||||||| |   |||||||||||| ||||||||||||    
T  2349 cacttttaaacaagtgtgtccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattatgtcaaactcaattctgtcaaaatcaatt 2252  T

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Target: scaffold0172 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 15321 - 15242
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| |||||| || | ||||||||||||||||| ||||||||||| |   ||| |||||||||||||||||||||    
T  15321 atccaaacataaatcactttatattcaactcacttttaaccaaaatcaatt-tgacaaaatcaattctatcaaaatcaatt 15242  T

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Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 99694 - 99749
Alignment:
Q  27 agtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    |||||| ||||||| |||| |||| |||||||||||||||||||| ||||||||||    
T  99694 agtgcaaccaaacataaattaatttacattcaactcacttttaattaaaatcaatt 99749  T

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Target: scaffold0031; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 99918 - 99965
Alignment:
Q  35 caaacaaaaatcaattcacattcaactcacttttaatcaaaatcaatt 82  Q
    |||||| |||| |||| |||||||||||||||||||| ||||||||||    
T  99918 caaacataaattaatttacattcaactcacttttaattaaaatcaatt 99965  T

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Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 116
Target Start/End: Complemental strand, 138597 - 138488
Alignment:
Q  7 ataagaatcacttttaaattagtgcatccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaa 106  Q
    ||||||||||||||||  |||  | ||||||||| ||||||||| |  |||| |||||||||||  ||||| |||||  ||||| |||||||   |||||    
T  138597 ataagaatcacttttatgttaaggtatccaaacataaatcaatttatgttcagctcacttttaactaaaattaattcaactaaaatcaattcggacaaaa 138498  T
Q  107 tcaattatca 116  Q
    ||||||||||    
T  138497 tcaattatca 138488  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 199431 - 199381
Alignment:
Q  34 ccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattct 84  Q
    ||||||| |||||| || || |||||||||||||||| |||||||||||||    
T  199431 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaattct 199381  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 144
Target Start/End: Original strand, 46822 - 46911
Alignment:
Q  55 ttcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaattatcaccgccgtgaaaccaaacacacacttaat 144  Q
    |||||||||||||||  |||||||||||||   ||| |||||| | |||||||||||| || || | |  ||||||||||||||| ||||    
T  46822 ttcaactcacttttaggcaaaatcaattctatcaaaatcaattatgtcaaaatcaattttcgccactggaaaaccaaacacacacctaat 46911  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 65537 - 65616
Alignment:
Q  32 atccaaacaaaaatcaattcacattcaactcacttttaatcaaaatcaattctcctaaactcaattctatcaaaatcaatt 112  Q
    ||||||||| |||||| || ||||| |||||| |||||| ||||||||||| ||  | | |||||||||||||||| ||||    
T  65537 atccaaacataaatcactttacattaaactcatttttaaccaaaatcaatt-tcacagaatcaattctatcaaaattaatt 65616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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