View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9262_low_4 (Length: 759)

Name: NF9262_low_4
Description: NF9262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9262_low_4
NF9262_low_4
[»] chr6 (18 HSPs)
chr6 (13-403)||(31108938-31109325)
chr6 (411-689)||(31109508-31109769)
chr6 (204-401)||(33242402-33242595)
chr6 (202-398)||(27441544-27441736)
chr6 (203-400)||(33253913-33254107)
chr6 (301-403)||(9698334-9698436)
chr6 (301-403)||(21279926-21280028)
chr6 (301-400)||(13743222-13743321)
chr6 (301-400)||(13748722-13748821)
chr6 (301-403)||(21293678-21293780)
chr6 (301-400)||(30014343-30014442)
chr6 (301-401)||(3213399-3213499)
chr6 (301-401)||(7292746-7292846)
chr6 (301-401)||(26670010-26670110)
chr6 (306-401)||(7367548-7367643)
chr6 (301-401)||(26466798-26466898)
chr6 (301-401)||(7273336-7273436)
chr6 (306-398)||(24203993-24204085)
[»] chr4 (34 HSPs)
chr4 (204-400)||(55272284-55272476)
chr4 (231-400)||(17619087-17619252)
chr4 (228-401)||(711959-712128)
chr4 (228-398)||(38851515-38851681)
chr4 (228-398)||(35037007-35037173)
chr4 (201-402)||(32728355-32728552)
chr4 (222-401)||(960796-960971)
chr4 (204-403)||(48435487-48435682)
chr4 (197-401)||(46827607-46827807)
chr4 (203-337)||(19880017-19880147)
chr4 (301-401)||(28988472-28988572)
chr4 (219-359)||(36004040-36004175)
chr4 (198-398)||(3756154-3756344)
chr4 (306-401)||(27864563-27864658)
chr4 (301-398)||(27893843-27893940)
chr4 (301-401)||(1771267-1771367)
chr4 (301-401)||(55966347-55966447)
chr4 (301-401)||(33703140-33703240)
chr4 (306-402)||(48463456-48463552)
chr4 (301-400)||(27550309-27550408)
chr4 (301-400)||(35017733-35017831)
chr4 (301-399)||(41878407-41878505)
chr4 (301-398)||(31680904-31681001)
chr4 (301-398)||(43735744-43735841)
chr4 (301-400)||(41847971-41848070)
chr4 (320-402)||(49229684-49229766)
chr4 (301-398)||(41327544-41327641)
chr4 (309-398)||(43514695-43514784)
chr4 (301-401)||(23035979-23036079)
chr4 (301-401)||(25051692-25051792)
chr4 (301-400)||(12496956-12497055)
chr4 (301-400)||(27316714-27316813)
chr4 (301-400)||(45490314-45490413)
chr4 (301-363)||(43949802-43949864)
[»] chr3 (24 HSPs)
chr3 (202-401)||(10457798-10457993)
chr3 (201-401)||(4190170-4190366)
chr3 (228-401)||(9434123-9434292)
chr3 (231-400)||(34791829-34791994)
chr3 (255-402)||(25996266-25996413)
chr3 (259-401)||(52627936-52628078)
chr3 (198-400)||(51757593-51757790)
chr3 (301-400)||(36150130-36150229)
chr3 (301-399)||(42394420-42394518)
chr3 (306-400)||(45126934-45127028)
chr3 (301-401)||(46941052-46941152)
chr3 (301-403)||(53581859-53581961)
chr3 (301-399)||(54237097-54237195)
chr3 (301-401)||(24688403-24688503)
chr3 (301-401)||(40808864-40808964)
chr3 (300-400)||(42100688-42100788)
chr3 (301-364)||(51249344-51249407)
chr3 (301-403)||(25413678-25413780)
chr3 (301-401)||(47191027-47191126)
chr3 (301-401)||(54246149-54246249)
chr3 (301-399)||(40480750-40480848)
chr3 (199-273)||(19148895-19148965)
chr3 (317-398)||(27748565-27748646)
chr3 (300-401)||(53273684-53273785)
[»] chr1 (23 HSPs)
chr1 (198-400)||(35003294-35003492)
chr1 (228-402)||(45705823-45705993)
chr1 (230-400)||(48119628-48119794)
chr1 (201-400)||(38335918-38336113)
chr1 (228-401)||(44112676-44112845)
chr1 (204-401)||(45639640-45639833)
chr1 (201-401)||(26585461-26585657)
chr1 (221-400)||(46168383-46168558)
chr1 (204-400)||(35000021-35000213)
chr1 (203-403)||(45427652-45427848)
chr1 (228-402)||(38113127-38113297)
chr1 (222-402)||(41065151-41065325)
chr1 (301-401)||(5489775-5489875)
chr1 (301-403)||(750306-750408)
chr1 (301-400)||(37814778-37814877)
chr1 (301-400)||(43571087-43571186)
chr1 (301-398)||(7447828-7447924)
chr1 (306-398)||(2497568-2497660)
chr1 (301-401)||(48498963-48499063)
chr1 (301-401)||(23989524-23989625)
chr1 (301-401)||(24769500-24769600)
chr1 (301-403)||(4401324-4401427)
chr1 (346-401)||(14427346-14427401)
[»] chr2 (28 HSPs)
chr2 (198-398)||(41281876-41282072)
chr2 (197-401)||(43114556-43114756)
chr2 (194-403)||(18491702-18491907)
chr2 (228-398)||(11825586-11825752)
chr2 (200-401)||(34895645-34895842)
chr2 (204-401)||(16803967-16804160)
chr2 (204-401)||(16843249-16843442)
chr2 (228-401)||(966766-966935)
chr2 (228-400)||(12415392-12415560)
chr2 (228-400)||(12427452-12427620)
chr2 (226-384)||(4451880-4452034)
chr2 (200-336)||(12531567-12531699)
chr2 (228-398)||(4299352-4299518)
chr2 (222-402)||(14285674-14285850)
chr2 (301-399)||(19047158-19047256)
chr2 (304-403)||(8896587-8896686)
chr2 (301-399)||(34817777-34817875)
chr2 (301-400)||(13780736-13780835)
chr2 (301-400)||(16096747-16096846)
chr2 (304-403)||(42026764-42026865)
chr2 (317-398)||(6518486-6518566)
chr2 (301-402)||(30838630-30838731)
chr2 (301-400)||(1750414-1750513)
chr2 (301-403)||(43490402-43490504)
chr2 (301-401)||(12302254-12302354)
chr2 (200-288)||(6518398-6518482)
chr2 (306-358)||(42849864-42849916)
chr2 (301-401)||(43335764-43335864)
[»] chr7 (24 HSPs)
chr7 (203-401)||(40236918-40237112)
chr7 (200-400)||(31513287-31513483)
chr7 (200-399)||(31408537-31408732)
chr7 (200-401)||(33384869-33385067)
chr7 (202-401)||(27535137-27535332)
chr7 (301-400)||(24001013-24001112)
chr7 (301-400)||(42538432-42538531)
chr7 (301-403)||(24280597-24280699)
chr7 (301-398)||(10573751-10573848)
chr7 (301-400)||(42972852-42972951)
chr7 (301-403)||(43317440-43317542)
chr7 (301-398)||(43343625-43343722)
chr7 (306-403)||(44326175-44326272)
chr7 (301-398)||(44416935-44417032)
chr7 (301-401)||(5015394-5015494)
chr7 (301-400)||(5810925-5811024)
chr7 (301-402)||(5194232-5194333)
chr7 (301-402)||(35069719-35069820)
chr7 (301-403)||(9216299-9216400)
chr7 (301-398)||(4638200-4638297)
chr7 (301-364)||(32029818-32029881)
chr7 (333-400)||(39998408-39998475)
chr7 (301-401)||(41861673-41861775)
chr7 (301-400)||(45326020-45326119)
[»] chr5 (11 HSPs)
chr5 (222-403)||(17208071-17208248)
chr5 (228-400)||(32473326-32473494)
chr5 (204-401)||(30622627-30622819)
chr5 (301-401)||(7617132-7617232)
chr5 (301-401)||(38470578-38470678)
chr5 (301-400)||(2614650-2614749)
chr5 (301-400)||(22512305-22512404)
chr5 (301-400)||(41334664-41334763)
chr5 (301-398)||(5256997-5257094)
chr5 (301-401)||(18033981-18034081)
chr5 (301-401)||(33801468-33801568)
[»] chr8 (24 HSPs)
chr8 (202-401)||(34304787-34304981)
chr8 (228-401)||(35181515-35181684)
chr8 (231-402)||(18066653-18066820)
chr8 (261-403)||(16603587-16603729)
chr8 (204-337)||(10678060-10678189)
chr8 (222-398)||(33629919-33630091)
chr8 (222-399)||(16358759-16358933)
chr8 (255-401)||(19386520-19386671)
chr8 (301-398)||(26125637-26125734)
chr8 (301-401)||(36743484-36743584)
chr8 (301-400)||(11582766-11582865)
chr8 (301-400)||(29705362-29705461)
chr8 (301-403)||(29800951-29801053)
chr8 (301-403)||(31384661-31384763)
chr8 (306-403)||(20148757-20148854)
chr8 (301-401)||(5754902-5755002)
chr8 (301-401)||(30660743-30660843)
chr8 (301-403)||(2546993-2547095)
chr8 (301-398)||(42295197-42295294)
chr8 (301-402)||(42197436-42197537)
chr8 (301-400)||(1375542-1375641)
chr8 (301-364)||(40528635-40528698)
chr8 (301-399)||(45397317-45397415)
chr8 (301-398)||(3743773-3743870)
[»] scaffold0003 (1 HSPs)
scaffold0003 (202-398)||(45625-45817)
[»] scaffold0100 (1 HSPs)
scaffold0100 (222-400)||(35382-35556)
[»] scaffold0038 (1 HSPs)
scaffold0038 (301-399)||(112656-112754)
[»] scaffold0385 (1 HSPs)
scaffold0385 (301-401)||(11250-11350)
[»] scaffold0119 (1 HSPs)
scaffold0119 (301-401)||(684-784)
[»] scaffold0187 (2 HSPs)
scaffold0187 (301-403)||(14189-14291)
scaffold0187 (301-403)||(24517-24619)
[»] scaffold0157 (1 HSPs)
scaffold0157 (301-400)||(23422-23521)


Alignment Details
Target: chr6 (Bit Score: 292; Significance: 1e-163; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 13 - 403
Target Start/End: Original strand, 31108938 - 31109325
Alignment:
Q  13 attatactcttgatactatcatttgctctttgttttcatatgaatatattacaatgtcattaaattggatgttcaaaatcatagattggtcaatgtaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  31108938 attatactcttgatactatcatttgctctttgttttcatatgaatatattacaatgttattaaattggatgttcaaaatcatagattggtcaatgtcatt 31109037  T
Q  113 tgcgcaattgaaaataaggagatcaaaactgtggttttgttcnnnnnnnnn-ggacgagagctgtattaaagcctctaatgtatataaaaaagagtgttg 211  Q
    ||||||||||||||||||||||||||||||| |||||||| |          ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31109038 tgcgcaattgaaaataaggagatcaaaactgcggttttgtccaaaaaaaaaaggacgagagctgtattaaagcctctaatgtatataaaaaagagtgttg 31109137  T
Q  212 acacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtg 311  Q
    ||||||||| |||||||||||||||||||||||||||||    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  31109138 acacatgtgcacccctatgtggcaatacacctcttacac----ccacacaaaatcctgacatgtggcaaggaagagggagaggagatgaaagagaaaatg 31109233  T
Q  312 tggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 403  Q
    ||||||| || ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  31109234 tggtcgtaagttgaatttatcaaaatatccctagtgcatggggtgtataatgggatgtatgattaaagggtgttcatgtaacattttcctat 31109325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 411 - 689
Target Start/End: Original strand, 31109508 - 31109769
Alignment:
Q  411 taagatgtgaaattttagcaatattttagccatgacaaacaataaagttttaggtatggaatacacatttaacagttgacaacctttaaaatatgctgaa 510  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |                
T  31109508 taagatgtgaaattttagcaatattttagccatgacaaacaataaagttttaggtatggaatacacatttaacagttgacaaccttga------------ 31109595  T
Q  511 aaaatcagtgatccaaaattt---ttaaataagtttgtcactcataaggtaaaccttgatgatccaaaatgtaattttgtcaacttaaaagaacttatca 607  Q
            ||||||||||| |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31109596 --------tgatccaaaatgtaatttaaataagtttgtcactcataaggtaaaccttgatgatccaaaatgtaattttgtcaacttaaaagaacttatca 31109687  T
Q  608 tcaactgtaacaacagagtatgtcatcgatttttcatatgactgaatggtccatgactacccagtaaattgaactcaacttt 689  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31109688 tcaactgtaacaacagagtatgtcatcgatttttcatatgactgaatggtccatgactacccagtaaattgaactcaacttt 31109769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 204 - 401
Target Start/End: Complemental strand, 33242595 - 33242402
Alignment:
Q  204 gagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaag 303  Q
    ||||| ||| ||||||  ||||| |||||||||||||||||||||||    |||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  33242595 gagtggtgatacatgtacacccccatgtggcaatacacctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaag 33242500  T
Q  304 agaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
    ||||||| || | |||||||||||||| |||||| ||| |  | ||||||||||| |||    |||||||||||| | ||||||||||||||||||||    
T  33242499 agaaagtatgtttgtgagatgaatttaccaaaatgtccttaatacatggggtgtacaataaggtgtatgattaaatggtgttcatgtaacattttcct 33242402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 202 - 398
Target Start/End: Complemental strand, 27441736 - 27441544
Alignment:
Q  202 aagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaa 301  Q
    ||||||| ||| ||||||  || || |||||||||||||||||||||||    ||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  27441736 aagagtggtgatacatgtacacacccatgtggcaatacacctcttacac----ccacataaaatcctgacatgtggcaaggaaaagggagaggagatgaa 27441641  T
Q  302 agagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    ||||||||| |||| |||||||||||||| |||||||||| |  | ||| || |||| ||| |  |||||||||||||| |||||||||||||||||    
T  27441640 agagaaagtatggttgtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 27441544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 203 - 400
Target Start/End: Complemental strand, 33254107 - 33253913
Alignment:
Q  203 agagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaa 302  Q
    |||||| ||| ||||||  ||| | |||||||||||||||| ||| ||    ||||||||||||| |||||| ||||| ||| |||||||||||||||||    
T  33254107 agagtggtgatacatgtacacctccatgtggcaatacaccttttatac----ccacacaaaatccggacatgtggcaaagaaaagggagaggagatgaaa 33254012  T
Q  303 -gagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
     || ||||| || | |||||||||||||| ||| || |||||  ||||||||||||| ||| |  ||| |||||||| | |||||||||||||||||||    
T  33254011 agataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacattttcc 33253913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 301 - 403
Target Start/End: Original strand, 9698334 - 9698436
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||| ||||||| ||||| ||||| || |||||| |||||||||||||||||||    
T  9698334 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 9698433  T
Q  401 tat 403  Q
    |||    
T  9698434 tat 9698436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 301 - 403
Target Start/End: Complemental strand, 21280028 - 21279926
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||||||| ||||||||||||  | |||||| |||  |||||||||||  | |||||| |||||||||||||||||||    
T  21280028 aagataaagtgtggttgtgagatgaatttaccaaaatatccctaatacatgggatgtgcaatggaatgtagaaataaagggtgttcatgtaacattttcc 21279929  T
Q  401 tat 403  Q
    |||    
T  21279928 tat 21279926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 301 - 400
Target Start/End: Original strand, 13743222 - 13743321
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||||||||||| ||| | |||||||| |||| | |||||||||||||||||||    
T  13743222 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13743321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 301 - 400
Target Start/End: Original strand, 13748722 - 13748821
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||||||||||| ||| | |||||||| |||| | |||||||||||||||||||    
T  13748722 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13748821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 301 - 403
Target Start/End: Original strand, 21293678 - 21293780
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||| ||||||||| |||||||||| |  | ||||||||||| | || ||||||||| |||||| |||| ||||||||||||||    
T  21293678 aagataaagtgtggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacagtgaaatgtatgaataaagggtgtttatgtaacattttcc 21293777  T
Q  401 tat 403  Q
    |||    
T  21293778 tat 21293780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 301 - 400
Target Start/End: Complemental strand, 30014442 - 30014343
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| ||||| |||| |||||||||| ||| |||||||| |||  | |||||| |||||||||| ||||| || |||||| |||||||||||||||||||    
T  30014442 aagataaagtatggttgtgagatgaacttaccaaaatatgcctaatacatgggatgtataatgggatgtaggaataaagggtgttcatgtaacattttcc 30014343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 3213499 - 3213399
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| ||||| |||| |||| ||||||||| |||||||||| |  | ||||||||||| ||||  |||||||| |||||| |||| ||||||||||||||    
T  3213499 aagataaagtatggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcc 3213400  T
Q  401 t 401  Q
    |    
T  3213399 t 3213399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 7292846 - 7292746
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||| ||||||||||||   ||||||| |||| | ||||| |||||||||||||    
T  7292846 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaatggtgttcttgtaacattttcc 7292747  T
Q  401 t 401  Q
    |    
T  7292746 t 7292746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 301 - 401
Target Start/End: Original strand, 26670010 - 26670110
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | |||| |||||| ||||   |||| || |||||| |||||||||||||||||||    
T  26670010 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 26670109  T
Q  401 t 401  Q
    |    
T  26670110 t 26670110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 306 - 401
Target Start/End: Complemental strand, 7367643 - 7367548
Alignment:
Q  306 aaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
    |||||||||| |||||||||| ||| ||||||||||||  | |||||| |||| ||||   ||||||| |||| ||||||||| ||||||||||||    
T  7367643 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtatgaataaatgatgttcatataacattttcct 7367548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 26466898 - 26466798
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||| ||||  | ||||| ||||| |||||  |||| || |||||| |||| ||||||||||||||    
T  26466898 aagataaagtgtggttgtgagatgaacttaccaaaataaccctaatacatggagtgtacaatggggtgtaggaataaagggtgtttatgtaacattttcc 26466799  T
Q  401 t 401  Q
    |    
T  26466798 t 26466798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 401
Target Start/End: Original strand, 7273336 - 7273436
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||| | |||||||||| ||| ||||||||| ||  | ||||||||||| |||    |||| || |||||| |||||||||||||||||||    
T  7273336 aagataaagtgtgattgtgagatgaacttaccaaaatatctctaatacatggggtgtacaataaggtgtaggaataaagggtgttcatgtaacattttcc 7273435  T
Q  401 t 401  Q
    |    
T  7273436 t 7273436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 306 - 398
Target Start/End: Original strand, 24203993 - 24204085
Alignment:
Q  306 aaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    |||||||||| |||||||||| ||| ||||||||||||  | ||||| ||||| ||| |  |||| || |||| | |||||||||||||||||    
T  24203993 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatagggtgtaggaataaatggtgttcatgtaacatttt 24204085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 1e-58; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 204 - 400
Target Start/End: Original strand, 55272284 - 55272476
Alignment:
Q  204 gagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaag 303  Q
    ||||| ||| ||||||  ||||| |||||||||||||||||||||||    |||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  55272284 gagtggtgatacatgtacacccccatgtggcaatacacctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaag 55272379  T
Q  304 agaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    ||||||| |||| |||||||||||||| |||||||||| |  ||||||||||||| ||| || ||||||||||||||||||||||||||||||||||    
T  55272380 agaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatgattaaaggatgttcatgtaacattttcc 55272476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 231 - 400
Target Start/End: Original strand, 17619087 - 17619252
Alignment:
Q  231 tggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaattta 330  Q
    ||||||||||||||||||||    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||    
T  17619087 tggcaatacacctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgagatgaattta 17619182  T
Q  331 tcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
     |||||||||| |  ||||||||||||| ||| |  |||||||||||| | |||||||||||||||||||    
T  17619183 ccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcc 17619252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 228 - 401
Target Start/End: Complemental strand, 712128 - 711959
Alignment:
Q  228 atgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaat 327  Q
    |||||||||||||||||||||||    |||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||| || | |||||||||||    
T  712128 atgtggcaatacacctcttacac----ccacacaaaatcctgacatgtggcaaggaaaaggaagaggagatgaaagagaaagtatgtttgtgagatgaat 712033  T
Q  328 ttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
    ||| |||||||||| |  ||||| ||||||| ||| |  |||||||||||||| ||||||||||||||||||||    
T  712032 ttaccaaaatatccttaatgcatagggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 711959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 228 - 398
Target Start/End: Complemental strand, 38851681 - 38851515
Alignment:
Q  228 atgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaat 327  Q
    ||||||||||||| ||||||||    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| |||||||||||    
T  38851681 atgtggcaatacatctcttaca----tccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgagatgaat 38851586  T
Q  328 ttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    |||||||||| ||| |  ||||||| ||||| | |   ||||||||||||||||| |||||||||||||||    
T  38851585 ttatcaaaatgtccataatgcatggagtgtacattatgatgtatgattaaaggatattcatgtaacatttt 38851515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 228 - 398
Target Start/End: Complemental strand, 35037173 - 35037007
Alignment:
Q  228 atgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaat 327  Q
    |||||||||||||||||||||||    |||||||||||||||||||| ||||||||| |||||||||||| |||||| ||| | |||| |||||||||||    
T  35037173 atgtggcaatacacctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagggagaggagaagaaagaaaaaatatggttgtgagatgaat 35037078  T
Q  328 ttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    ||| |||||||||| |  ||||||||||||| ||| || |||||| ||||||| || ||||||||||||||    
T  35037077 ttaccaaaatatccttaatgcatggggtgtacaatagagtgtatggttaaagggtgctcatgtaacatttt 35037007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 201 - 402
Target Start/End: Complemental strand, 32728552 - 32728355
Alignment:
Q  201 aaagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatga 300  Q
    |||||||| ||| ||||||  ||||| ||||||||||||||||||||||| ||    || |||||| | | ||| ||||||||| |||||||||||||||    
T  32728552 aaagagtggtgatacatgtacacccccatgtggcaatacacctcttacacgca----caaaaaatcttaatatgtggcaaggaaaagggagaggagatga 32728457  T
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||||||||| || | ||||||||||||||  ||||| ||| |  ||||||||||||| ||| |  ||||||||||||||||||||||||||||||||||    
T  32728456 aagagaaagtatgattgtgagatgaatttactaaaatgtccttaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcc 32728357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 222 - 401
Target Start/End: Original strand, 960796 - 960971
Alignment:
Q  222 acccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgag 321  Q
    ||||||||||| |||||||||||||||||    |||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||  | |  | ||    
T  960796 acccctatgtgacaatacacctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagggataggagatgaaagagaaagtacgattataag 960891  T
Q  322 atgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
    ||||||||| |||||| |||||  || || ||||||| ||| || |||||||||||||| ||||||||||||||||||||    
T  960892 atgaatttaccaaaatgtccctaatgtatagggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcct 960971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 204 - 403
Target Start/End: Original strand, 48435487 - 48435682
Alignment:
Q  204 gagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaag 303  Q
    ||||| ||| ||||||  ||||| ||||| ||||||| |||||||||    |||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  48435487 gagtggtgatacatgtacacccccatgtgacaatacatctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaag 48435582  T
Q  304 agaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 403  Q
    | ||||| || | |||||||||||||| ||| || |||||  ||||||||||||| ||| |  ||| |||||||| | ||||||||||||| ||||||||    
T  48435583 ataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttcctat 48435682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 197 - 401
Target Start/End: Original strand, 46827607 - 46827807
Alignment:
Q  197 taaaaaagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggag 296  Q
    |||||||||||| ||| ||||||  ||| | |||||| |||||| |||||||||    |||||||||||||||||||| |||||| || |||||| ||||    
T  46827607 taaaaaagagtggtgatacatgtacacctccatgtggaaatacatctcttacac----ccacacaaaatcctgacatgtggcaagaaaaagggaggggag 46827702  T
Q  297 atgaaagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatt 396  Q
    |||||||||||| | || | ||||||| |||||| |||||  | | |  ||||| ||||||| ||| || |||||||||||||| |||||||||||||||    
T  46827703 atgaaagagaaaatatgtttgtgagataaatttaccaaaacgttcttaatgcattgggtgtacaatagagtgtatgattaaagggtgttcatgtaacatt 46827802  T
Q  397 ttcct 401  Q
    |||||    
T  46827803 ttcct 46827807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 203 - 337
Target Start/End: Complemental strand, 19880147 - 19880017
Alignment:
Q  203 agagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaa 302  Q
    |||||| ||| ||||||  ||||| |||||||||||||||||||||||    |||||||||||||||||||| ||||||||| ||||| |||||||||||    
T  19880147 agagtggtgatacatgtacacccccatgtggcaatacacctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagggaaaggagatgaaa 19880052  T
Q  303 gagaaagtgtggtcgtgagatgaatttatcaaaat 337  Q
    |||||||| || | |||||||||||||| ||||||    
T  19880051 gagaaagtatgattgtgagatgaatttaccaaaat 19880017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 28988572 - 28988472
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||||||||||||||  |||||||||||||||||||| ||||| |||||||||||||| ||||   ||||||| |||||| |||||||||||||||||||    
T  28988572 aagagaaagtgtggttatgagatgaatttatcaaaatgtccctagtgcatggggtgtacaatgaggtgtatgaataaagggtgttcatgtaacattttcc 28988473  T
Q  401 t 401  Q
    |    
T  28988472 t 28988472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 219 - 359
Target Start/End: Original strand, 36004040 - 36004175
Alignment:
Q  219 tgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgt 318  Q
    |||||||| ||||||||||||| ||||||||| ||     |||||||  ||| ||| ||||||||| ||||||||||||||||||||||||| |||| ||    
T  36004040 tgtacccc-atgtggcaatacatctcttacactcaa----acaaaattttgatatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgt 36004134  T
Q  319 gagatgaatttatcaaaatatccctggtgcatggggtgtat 359  Q
    ||||| ||||||||||||| |||||  |  |||||||||||    
T  36004135 gagataaatttatcaaaatgtccctaatatatggggtgtat 36004175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 198 - 398
Target Start/End: Original strand, 3756154 - 3756344
Alignment:
Q  198 aaaaaagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggaga 297  Q
    |||| |||||| ||| ||||||  || || ||||||||||||| |||||||||    ||||| |||||| ||||||| ||||||||| ||| |||         
T  3756154 aaaatagagtggtgatacatgtacactcccatgtggcaatacaactcttacac----ccacataaaatcatgacatgtggcaaggaaaaggaaga----- 3756244  T
Q  298 tgaaagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattt 397  Q
    ||||||| ||||| || | ||||||| ||||||  ||||||||| |  ||||||||||||| ||| |  |||||||||||||| ||||||||||||||||    
T  3756245 tgaaaga-aaagtatgattgtgagataaatttactaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattt 3756343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 306 - 401
Target Start/End: Complemental strand, 27864658 - 27864563
Alignment:
Q  306 aaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
    |||||||||| |||||||||| ||| ||||||||||||  | ||||||||||| ||||| |||||||| |||| | |||| |||||||||||||||    
T  27864658 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacattttcct 27864563  T

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Target: chr4; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 301 - 398
Target Start/End: Original strand, 27893843 - 27893940
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||||||||||| ||||| |||||||| |||| | |||| ||||||||||||    
T  27893843 aagataaagtgtggttgtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 27893940  T

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Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 301 - 401
Target Start/End: Original strand, 1771267 - 1771367
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| ||| |||||| |||||||||| ||||||||||||| ||  | ||||||||||| |||||  |||| || |||||| |||||||||||||||||||    
T  1771267 aagataaaatgtggttgtgagatgaacttatcaaaatatctctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1771366  T
Q  401 t 401  Q
    |    
T  1771367 t 1771367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 301 - 401
Target Start/End: Original strand, 55966347 - 55966447
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| ||| |||||| |||||||||| ||| ||||||||||||  | |||||| |||| ||||| |||||||| |||||| |||| ||||||||||||||    
T  55966347 aagataaattgtggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgggatgtatgaataaagggtgtttatgtaacattttcc 55966446  T
Q  401 t 401  Q
    |    
T  55966447 t 55966447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 33703240 - 33703140
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||||||||||| |||   |||||  | |||||| |||||||||||||||||||    
T  33703240 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcc 33703141  T
Q  401 t 401  Q
    |    
T  33703140 t 33703140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 306 - 402
Target Start/End: Original strand, 48463456 - 48463552
Alignment:
Q  306 aaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 402  Q
    ||||| |||| |||||||||| ||| ||||||||||||  | |||||| |||| |||| ||||||||| |||| | |||| ||||||||||||||||    
T  48463456 aaagtatggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaaatgtatgaataaatggtgtttatgtaacattttccta 48463552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 301 - 400
Target Start/End: Complemental strand, 27550408 - 27550309
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| || ||||||| ||| ||||||||||||  | |||| |||||| |||||| ||||  | |||||| |||||||||||||||||||    
T  27550408 aagataaagtgtggttgtaagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcc 27550309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 301 - 400
Target Start/End: Complemental strand, 35017831 - 35017733
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||||||||||| ||||  || || || |||||| |||||||||||||||||||    
T  35017831 aagataaagtgtggttgtgagatgaacttaccaaaatatccct-atacatggggtgtacaatgagatataggaataaagggtgttcatgtaacattttcc 35017733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 399
Target Start/End: Complemental strand, 41878505 - 41878407
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 399  Q
    ||||||| || |||| |||||||||| ||||||||||||||||  || || ||||||| ||||   ||||||| |||||  ||||||||||||||||||    
T  41878505 aagagaaggtttggttgtgagatgaacttatcaaaatatccctaatggatagggtgtacaatgaggtgtatgaataaagagtgttcatgtaacattttc 41878407  T

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Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 301 - 398
Target Start/End: Complemental strand, 31681001 - 31680904
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  |  | |||||||| |||||||||||||| |||| | |||| | ||||||||||    
T  31681001 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatatacggggtgtacaatggaatgtatgaataaatggtgtttacgtaacatttt 31680904  T

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Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 301 - 398
Target Start/End: Complemental strand, 43735841 - 43735744
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    |||| |||||||| | |||||||||| ||||||||||||| ||  | |||||  |||||||||  ||||| || |||||||||||||||||| |||||    
T  43735841 aagataaagtgtgattgtgagatgaacttatcaaaatatctctaatacatggaatgtataatgagatgtaggaataaaggatgttcatgtaatatttt 43735744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 301 - 400
Target Start/End: Complemental strand, 41848070 - 41847971
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    ||||||||||||||| ||| |||||||||  |||||| || ||  ||||||||||||| ||||   ||| |||  ||||||||||| |||||||||||||    
T  41848070 aagagaaagtgtggttgtgcgatgaatttgccaaaatgtctctaatgcatggggtgtacaatgaggtgtgtgaaaaaaggatgttcttgtaacattttcc 41847971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 320 - 402
Target Start/End: Original strand, 49229684 - 49229766
Alignment:
Q  320 agatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 402  Q
    ||||||||||| || ||||||| |  ||||||  ||||| ||| |  |||||||||||||||||||||| |||||||||||||    
T  49229684 agatgaatttaccagaatatccttaatgcatgaagtgtacaatagggtgtatgattaaaggatgttcatataacattttccta 49229766  T

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Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 398
Target Start/End: Original strand, 41327544 - 41327641
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    ||||||||||||||  |||||||||||||| |||||| ||| | ||||||  |||||| |||||  ||| ||| |||||| |||  ||||||||||||    
T  41327544 aagagaaagtgtggatgtgagatgaatttaccaaaatgtccgtagtgcataaggtgtacaatggggtgtgtgaataaagggtgtctatgtaacatttt 41327641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 398
Target Start/End: Original strand, 43514695 - 43514784
Alignment:
Q  309 gtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    ||||||| |||||||||| ||| ||||||| ||||  | ||||  ||||| |||||| |||| || |||||| |||||||||||||||||    
T  43514695 gtgtggttgtgagatgaacttaccaaaataaccctaatacatgaagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 43514784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 23036079 - 23035979
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| |||  |||||||||||  |  || ||||||| ||| |  |||| || ||||||| ||||||||||||||||||    
T  23036079 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatatatagggtgtacaatagggtgtaggaataaaggaggttcatgtaacattttcc 23035980  T
Q  401 t 401  Q
    |    
T  23035979 t 23035979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 25051792 - 25051692
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||| | |||||||||| ||| ||||||||||||  | ||| ||||||| |||||  |||| || |||||  ||||||||| |||||||||    
T  25051792 aagataaagtgtgattgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagtgtgttcatgtgacattttcc 25051693  T
Q  401 t 401  Q
    |    
T  25051692 t 25051692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 400
Target Start/End: Complemental strand, 12497055 - 12496956
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||| | || ||||||| ||| ||||||||| ||  | |||||| |||| |||||| |||| || |||||| ||||||| |||||||||||    
T  12497055 aagataaagtgtgattgtaagatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 12496956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 400
Target Start/End: Original strand, 27316714 - 27316813
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| ||||||||||  ||||||||| ||| |||||||||| |  | ||||||||||||||||   |||| || |||||| ||||| | |||||||||||    
T  27316714 aagataaagtgtggttatgagatgaacttaccaaaatatccttaatacatggggtgtataatgaggtgtaggaataaagggtgttcgtttaacattttcc 27316813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 400
Target Start/End: Original strand, 45490314 - 45490413
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| ||||||||||||||  ||| |||||||  | |||| |||||| ||| | |||||| | ||||   |||||||||||||||||||    
T  45490314 aagataaagtgtggttgtgagatgaatttactaaagtatccctaatacatgaggtgtacaattggatgtataaataaaatgtgttcatgtaacattttcc 45490413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 301 - 363
Target Start/End: Original strand, 43949802 - 43949864
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatg 363  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||||||||||| ||||    
T  43949802 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatg 43949864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 3e-53; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 202 - 401
Target Start/End: Original strand, 10457798 - 10457993
Alignment:
Q  202 aagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaa 301  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||||    ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  10457798 aagagtgttgatacatgtataccctcatgtggcaatacacctcttaca----tccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaa 10457893  T
Q  302 agagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
    ||||||||| |||| ||||||| |||||| |||||||||| |  ||||||||||||| ||| |  |||||||||||| | ||||||||||||||||||||    
T  10457894 agagaaagtatggttgtgagataaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcct 10457993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 201 - 401
Target Start/End: Original strand, 4190170 - 4190366
Alignment:
Q  201 aaagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatga 300  Q
    |||||||| ||| |||||| ||||| ||||||||||||||||||||||||    |||||||||||||||||||| ||||||||| ||||| |||||||||    
T  4190170 aaagagtggtgatacatgtatacccttatgtggcaatacacctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagggaaaggagatga 4190265  T
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||||||||| |||| |||||||||||||| ||||||||| ||  | |||  |||||| ||| |  |||||||||||||| |||||||||||||||||||    
T  4190266 aagagaaagtatggttgtgagatgaatttaccaaaatatctctaatacataaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 4190365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 228 - 401
Target Start/End: Complemental strand, 9434292 - 9434123
Alignment:
Q  228 atgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaat 327  Q
    |||||||||||||||||||||||    ||||||||||| |||||||| ||||||||| || |||||||||||||||||||||| |||| ||||||||||     
T  9434292 atgtggcaatacacctcttacac----ccacacaaaattctgacatgtggcaaggaaaagtgagaggagatgaaagagaaagtatggttgtgagatgaaa 9434197  T
Q  328 ttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
    ||| |||||| |||||  ||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||    
T  9434196 ttaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcct 9434123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 231 - 400
Target Start/End: Complemental strand, 34791994 - 34791829
Alignment:
Q  231 tggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaattta 330  Q
    |||||||||||||||||||    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| |||||||||| |||    
T  34791994 tggcaatacacctcttaca----tccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgagatgaaatta 34791899  T
Q  331 tcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    | ||||| |||||  |||||| ||| || |||    |||||||||||||| |||||||||||||||||||    
T  34791898 ttaaaatgtccctaatgcatgaggtttacaatatggtgtatgattaaagggtgttcatgtaacattttcc 34791829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 255 - 402
Target Start/End: Complemental strand, 25996413 - 25996266
Alignment:
Q  255 ccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatgggg 354  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| | |||| |||||||||||||| |||||| ||| |  |  ||||||    
T  25996413 ccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaaatatggttgtgagatgaatttaccaaaatgtccttaatatatgggg 25996314  T
Q  355 tgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 402  Q
    |||| |||   ||||||||||||||| |||||||||||||||||||||    
T  25996313 tgtacaataagatgtatgattaaagggtgttcatgtaacattttccta 25996266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 259 - 401
Target Start/End: Original strand, 52627936 - 52628078
Alignment:
Q  259 acaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgta 358  Q
    |||||||||||||||| ||| ||||| |||||||| |||||||||||||||| || | |||||||||||||| |||||||| | |  |||||| ||||||    
T  52627936 acaaaatcctgacatgtggccaggaaaagggagagaagatgaaagagaaagtatgattgtgagatgaatttaccaaaatatacttaatgcatgaggtgta 52628035  T
Q  359 taatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
     ||| | ||||||||||||||| |||||| |||||||||||||    
T  52628036 caataggatgtatgattaaagggtgttcacgtaacattttcct 52628078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 198 - 400
Target Start/End: Complemental strand, 51757790 - 51757593
Alignment:
Q  198 aaaaaagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggaga 297  Q
    ||||| ||||| ||| ||||||  ||||| ||||||||||| |||||||||||    ||||||| |||||||||||| ||||||||| ||| ||||||||    
T  51757790 aaaaatgagtggtgatacatgtacacccc-atgtggcaatatacctcttacac----ccacacacaatcctgacatgtggcaaggaaaaggaagaggaga 51757696  T
Q  298 tgaaagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattt 397  Q
    ||||||||||||| |||| |||||||||| |||  ||||| ||| |  |||||| |||||| ||| |  |||||||||||||| |||| |||||| ||||    
T  51757695 tgaaagagaaagtatggttgtgagatgaaattactaaaatgtccataatgcatgaggtgtacaatagggtgtatgattaaagggtgtttatgtaatattt 51757596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 301 - 400
Target Start/End: Complemental strand, 36150229 - 36150130
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||| | ||| |||||||||||||  ||||||| |||||| | |||||||||||||||||    
T  36150229 aagataaagtgtggttgtgagatgaacttaccaaaatatccctgatacatagggtgtataatggggtgtatgaataaagggtattcatgtaacattttcc 36150130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 301 - 399
Target Start/End: Original strand, 42394420 - 42394518
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 399  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||| ||||||| ||||||||||| || |||||| ||||||||||||||||||    
T  42394420 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 42394518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 306 - 400
Target Start/End: Original strand, 45126934 - 45127028
Alignment:
Q  306 aaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||||||||| |||||||||| ||| ||||||||||||  | ||||||||||| ||||| |||||||| |||||| |||| ||||||||||||||    
T  45126934 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaagggtgtttatgtaacattttcc 45127028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 46941152 - 46941052
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||||||||||| ||||  ||||| || |||||| |||||||||||||||||||    
T  46941152 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttcc 46941053  T
Q  401 t 401  Q
    |    
T  46941052 t 46941052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 301 - 403
Target Start/End: Original strand, 53581859 - 53581961
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||||||||||||||||  | ||| || |||| |||||| ||||||| |||||  ||||||||||||||||| |    
T  53581859 aagataaagtgtggttgtgagatgaacttatcaaaatatccctaatacataggatgtacaatggagtgtatgaataaagagtgttcatgtaacatttttc 53581958  T
Q  401 tat 403  Q
    |||    
T  53581959 tat 53581961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 301 - 399
Target Start/End: Complemental strand, 54237195 - 54237097
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 399  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||| ||||||| ||||| ||||| || |||||| ||||||||||||||||||    
T  54237195 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttc 54237097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 301 - 401
Target Start/End: Original strand, 24688403 - 24688503
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||| ||||||| |||||| ||||  | |||||| |||||||||||||||||||    
T  24688403 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcc 24688502  T
Q  401 t 401  Q
    |    
T  24688503 t 24688503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 40808964 - 40808864
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||||||||||| |||||  |||| || |||| | |||| ||||||||||||||    
T  40808964 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaatggtgttgatgtaacattttcc 40808865  T
Q  401 t 401  Q
    |    
T  40808864 t 40808864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 300 - 400
Target Start/End: Complemental strand, 42100788 - 42100688
Alignment:
Q  300 aaagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 399  Q
    ||||| ||| |||||| |||||||||| ||| ||||||||||||  | ||||||||||| ||||   |||| || |||||| ||||||||||||||||||    
T  42100788 aaagataaaatgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 42100689  T
Q  400 c 400  Q
    |    
T  42100688 c 42100688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 301 - 364
Target Start/End: Complemental strand, 51249407 - 51249344
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatgg 364  Q
    ||||||||||||||| |||||||||||||| |||||||||| |  |||||| ||||||||||||    
T  51249407 aagagaaagtgtggttgtgagatgaatttaccaaaatatccttaatgcatgaggtgtataatgg 51249344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 403
Target Start/End: Complemental strand, 25413780 - 25413678
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| |||  |||||||||||  | |||  |||||| |||||  |||| || |||||| |||||||||||||||||||    
T  25413780 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 25413681  T
Q  401 tat 403  Q
    |||    
T  25413680 tat 25413678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 401
Target Start/End: Original strand, 47191027 - 47191126
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||||||||||||| ||  | ||| ||||||| ||||   |||| || |||||| |||||||||||||||||||    
T  47191027 aagataaagtgtggttgtgagatgaacttatcaaaatatctctaatacat-gggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 47191125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 401
Target Start/End: Original strand, 54246149 - 54246249
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| |||  |||||||| ||  | ||| ||||||| |||||  |||| || |||||| |||||||||||||||||||    
T  54246149 aagataaagtgtggttgtgagatgaacttacaaaaatatctctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 54246248  T
Q  401 t 401  Q
    |    
T  54246249 t 54246249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 399
Target Start/End: Complemental strand, 40480848 - 40480750
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 399  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||| || |||| |||||    ||||| |||||| ||||||||||||||||||    
T  40480848 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacataggatgtacaatggggcatatgaataaagggtgttcatgtaacattttc 40480750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 273
Target Start/End: Complemental strand, 19148965 - 19148895
Alignment:
Q  199 aaaaagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacat 273  Q
    ||||||| || ||||||||||  ||||| ||||||||||||||| |||||||    ||||||||||| |||||||    
T  19148965 aaaaagaatggtgacacatgtacacccccatgtggcaatacaccacttacac----ccacacaaaattctgacat 19148895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 317 - 398
Target Start/End: Complemental strand, 27748646 - 27748565
Alignment:
Q  317 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    |||||||||| ||| ||||||||||||  | |||  |||||||||||   ||||||| |||| | |||||||||||||||||    
T  27748646 gtgagatgaacttaccaaaatatccctaatacataaggtgtataatgaggtgtatgaataaaaggtgttcatgtaacatttt 27748565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 401
Target Start/End: Original strand, 53273684 - 53273785
Alignment:
Q  300 aaagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 399  Q
    ||||| ||||| |||| |||||||||| ||| ||||||||||||  | |||||| |||| ||||   | || || |||| ||||||||| ||||||||||    
T  53273684 aaagataaagtatggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtataggaataaatgatgttcatataacattttc 53273783  T
Q  400 ct 401  Q
    ||    
T  53273784 ct 53273785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 1e-52; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 198 - 400
Target Start/End: Complemental strand, 35003492 - 35003294
Alignment:
Q  198 aaaaaagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggaga 297  Q
    ||||||||||| ||| |||||   ||||| |||||||||||||||||||||||    |||||||||||||||||||| ||||||||| ||||||||||||    
T  35003492 aaaaaagagtggtgatacatgcacacccccatgtggcaatacacctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagggagaggaga 35003397  T
Q  298 tgaaagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattt 397  Q
    ||||||||||||| |||| |||||||||||||| |||||||||| |  || |||||||||| ||| |  |||||||||||||| ||||||||||||||||    
T  35003396 tgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgtatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattt 35003297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 228 - 402
Target Start/End: Complemental strand, 45705993 - 45705823
Alignment:
Q  228 atgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaat 327  Q
    |||||||||||||||||||||||    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| |||||||||||    
T  45705993 atgtggcaatacacctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgagatgaat 45705898  T
Q  328 ttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 402  Q
    |||||||||| ||| |  ||||||| ||||| ||| ||||||||||||||||| ||||||| |||||||||||||    
T  45705897 ttatcaaaatgtccataatgcatggagtgtacaatagaatgtatgattaaagggtgttcatataacattttccta 45705823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 230 - 400
Target Start/End: Complemental strand, 48119794 - 48119628
Alignment:
Q  230 gtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaattt 329  Q
    |||||||||||||||||||||    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||    
T  48119794 gtggcaatacacctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgagatgaattt 48119699  T
Q  330 atcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    | |||||||||| |  ||||||||||||| ||| |  |||||||||||||| |||||||||||||||||||    
T  48119698 accaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 48119628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 201 - 400
Target Start/End: Complemental strand, 38336113 - 38335918
Alignment:
Q  201 aaagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatga 300  Q
    |||||||| ||| || |||  |||||||||||||||||||||||||| |    | ||||||||||||||||||| ||||||||| |||||||||||||||    
T  38336113 aaagagtggtgatacttgtacacccctatgtggcaatacacctcttata----ttcacacaaaatcctgacatgtggcaaggaaaagggagaggagatga 38336018  T
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||||||||| |||| |||||||||||||| |||||||||| |  |||||||| |||| |||    |||||||||||||| |||||||||||||||||||    
T  38336017 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatgggatgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 38335918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 228 - 401
Target Start/End: Complemental strand, 44112845 - 44112676
Alignment:
Q  228 atgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaat 327  Q
    |||||||||||||||||||||||    ||||||||||| |||||||| ||||||||| || |||||||||||||||||||||| |||| ||||||||||     
T  44112845 atgtggcaatacacctcttacac----ccacacaaaattctgacatgtggcaaggaaaagtgagaggagatgaaagagaaagtatggttgtgagatgaaa 44112750  T
Q  328 ttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
    ||| |||||| |||||  ||||||||||||| ||| |  |||||||||||||| ||||||||||||||||||||    
T  44112749 ttaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 44112676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 204 - 401
Target Start/End: Original strand, 45639640 - 45639833
Alignment:
Q  204 gagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaag 303  Q
    ||||| ||| ||||||  |||||  ||||||||||||||||||||||    |||||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  45639640 gagtggtgatacatgtacacccccttgtggcaatacacctcttacac----ccacacaaaatcctaacatgtggcaaggaaaagggagaggagatgaaag 45639735  T
Q  304 agaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
    ||||||| || | |||||||||||||| |||||||||| |  || |||||||||| ||| | ||||||||||||||  ||||||||||||||||||||    
T  45639736 agaaagtatgattgtgagatgaatttaccaaaatatccttaatgtatggggtgtacaataggatgtatgattaaagagtgttcatgtaacattttcct 45639833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 201 - 401
Target Start/End: Complemental strand, 26585657 - 26585461
Alignment:
Q  201 aaagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatga 300  Q
    |||||||| ||| ||||||  ||||| ||| ||||||||| ||||||||    ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  26585657 aaagagtggtgatacatgtacacccccatgcggcaatacatctcttaca----tccacacaaaatcctgacatgtggcaaggaaaagggagaggagatga 26585562  T
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||||||||| || | | ||||||||||||  ||||||||| |  ||||||||||||| |||  | ||||||||||||| |||||||| |||||||||||    
T  26585561 aagagaaagtatgattgcgagatgaatttactaaaatatccttaatgcatggggtgtacaatatagtgtatgattaaagaatgttcatctaacattttcc 26585462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 221 - 400
Target Start/End: Complemental strand, 46168558 - 46168383
Alignment:
Q  221 tacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtga 320  Q
    |||||| ||||||||||||| |||||||||    |||||||||||  ||||||| |||||| || ||||||||||||||||||||||||| |||| ||||    
T  46168558 tacccccatgtggcaatacatctcttacac----ccacacaaaattatgacatgtggcaagaaaaagggagaggagatgaaagagaaagtatggttgtga 46168463  T
Q  321 gatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||||||||| |||||||||| |  ||||| ||||||| ||| | || |||||||||||| |||||||||||||||||||    
T  46168462 gatgaatttaccaaaatatccttaatgcattgggtgtacaataggatatatgattaaagggtgttcatgtaacattttcc 46168383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 204 - 400
Target Start/End: Original strand, 35000021 - 35000213
Alignment:
Q  204 gagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaag 303  Q
    ||||| ||| ||||||  ||||| ||||||||||||| ||||||||| |||    |||||||||||||||| ||||||||| ||||||||||||||||||    
T  35000021 gagtggtgatacatgtacacccccatgtggcaatacatctcttacacccat----acaaaatcctgacatgtggcaaggaaaagggagaggagatgaaag 35000116  T
Q  304 agaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    ||||||| |||| ||||||| ||||||||||||| |||||  | ||||  || || ||| || |||||||||||| | |||||||||||||||||||    
T  35000117 agaaagtatggttgtgagataaatttatcaaaatgtccctaatacatgaagtatacaatagagtgtatgattaaaaggtgttcatgtaacattttcc 35000213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 203 - 403
Target Start/End: Original strand, 45427652 - 45427848
Alignment:
Q  203 agagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaa 302  Q
    |||||| ||| ||||||  | ||| |||||||||||||||||||     ||||||||||||||||||||||| || |||||| |||||||||||||||||    
T  45427652 agagtggtgatacatgtacatccccatgtggcaatacacctctt----ccatccacacaaaatcctgacatgtggtaaggaaaagggagaggagatgaaa 45427747  T
Q  303 gagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 402  Q
    |||||||| |||| |||||||||| ||| |||||| |||||  ||||||| ||||| ||| |  |||||||||||| | | |||||||||||||||||||    
T  45427748 gagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggagtgtacaatagggtgtatgattaaaaggtattcatgtaacattttccta 45427847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 228 - 402
Target Start/End: Original strand, 38113127 - 38113297
Alignment:
Q  228 atgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaat 327  Q
    ||||| |||||||||||||||||    |||||||||||||||||||| ||||| ||| |||||||||||||||||||| |||| |||| |||||||||||    
T  38113127 atgtgacaatacacctcttacac----ccacacaaaatcctgacatgtggcaaagaaaagggagaggagatgaaagagtaagtatggttgtgagatgaat 38113222  T
Q  328 ttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 402  Q
    ||| |||||| ||  |  ||||||||||||| ||| |  |||||||||||||| ||||||| |||||||||||||    
T  38113223 ttaccaaaatgtcattaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatataacattttccta 38113297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 222 - 402
Target Start/End: Complemental strand, 41065325 - 41065151
Alignment:
Q  222 acccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgag 321  Q
    ||||| ||||||||||||||||||||||    ||| ||||||||||||||||| ||||||||| ||||||  |||| |||||||||||| |||| |||||    
T  41065325 acccccatgtggcaatacacctcttaca----tccgcacaaaatcctgacatgtggcaaggaaaagggag--gagaggaaagagaaagtatggttgtgag 41065232  T
Q  322 atgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 402  Q
    ||||| ||| ||||||  ||||  ||||||||||||| ||  |  |||||||||||||| |||||||||||||||||||||    
T  41065231 atgaaattaccaaaatgcccctaatgcatggggtgtacaacagggtgtatgattaaagggtgttcatgtaacattttccta 41065151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 5489875 - 5489775
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||| ||||||| ||||| ||||| || |||||| |||||||||||||||||||    
T  5489875 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 5489776  T
Q  401 t 401  Q
    |    
T  5489775 t 5489775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 301 - 403
Target Start/End: Original strand, 750306 - 750408
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| ||||||||||  ||||||||||||||||||||||||||| | ||||||||||| |||||  |||| ||   |||| |||||| ||||||||||||    
T  750306 aagataaagtgtggttttgagatgaatttatcaaaatatccctgatacatggggtgtacaatggggtgtaggaaataagggtgttcacgtaacattttcc 750405  T
Q  401 tat 403  Q
    |||    
T  750406 tat 750408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 301 - 400
Target Start/End: Complemental strand, 37814877 - 37814778
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||| ||||||||| |||||||||| |  | ||||||||||| ||||  |||||||| |||||| |||| ||||||||||||||    
T  37814877 aagataaagtgtggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcc 37814778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 301 - 400
Target Start/End: Original strand, 43571087 - 43571186
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||||||||||| ||||   |||| || |||||| |||||||||||||||||||    
T  43571087 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 43571186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 398
Target Start/End: Complemental strand, 7447924 - 7447828
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    |||| |||||||||| |||||||||| |||||||||||||  |  | ||| ||||||| ||||| ||||| || ||||||||||||||||||||||||    
T  7447924 aagataaagtgtggttgtgagatgaacttatcaaaatatctgtaatacat-gggtgtacaatgggatgtaggaataaaggatgttcatgtaacatttt 7447828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 306 - 398
Target Start/End: Original strand, 2497568 - 2497660
Alignment:
Q  306 aaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    |||||||||| |||||||||| ||| |||||||||| |  |  |||||||||| |||||||||||||| |||| | |||| ||||||||||||    
T  2497568 aaagtgtggttgtgagatgaacttaccaaaatatccttaatatatggggtgtacaatggaatgtatgaataaatggtgtttatgtaacatttt 2497660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 301 - 401
Target Start/End: Original strand, 48498963 - 48499063
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | |||| |||||| |||||| ||||  | |||||  |||||||||||||||||||    
T  48498963 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 48499062  T
Q  401 t 401  Q
    |    
T  48499063 t 48499063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 301 - 401
Target Start/End: Original strand, 23989524 - 23989625
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatg-attaaaggatgttcatgtaacattttc 399  Q
    |||| |||||||||| ||||||| |||||| ||||||||||||  | ||| |||| || ||| || |||||| || ||||| ||||||||||||||||||    
T  23989524 aagataaagtgtggttgtgagataaatttaccaaaatatccctaatacatagggtatacaattgagtgtatgaataaaagggtgttcatgtaacattttc 23989623  T
Q  400 ct 401  Q
    ||    
T  23989624 ct 23989625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 401
Target Start/End: Original strand, 24769500 - 24769600
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||| | ||| ||| ||||||||||||  | ||||||||||| |||||| ||||  | |||| | |||||||| ||||||||||    
T  24769500 aagataaagtgtggttgtgataagaacttaccaaaatatccctaatacatggggtgtacaatggagtgtagaaataaaaggtgttcatgaaacattttcc 24769599  T
Q  401 t 401  Q
    |    
T  24769600 t 24769600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 403
Target Start/End: Complemental strand, 4401427 - 4401324
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaagga-tgttcatgtaacattttc 399  Q
    |||| |||||||||| |||||||||| ||| ||||||||| ||  | ||||||||||| |||| | |||| || |||| || |||||||||| ||||||     
T  4401427 aagataaagtgtggttgtgagatgaacttaccaaaatatctctaatacatggggtgtacaatgaagtgtaggaataaaagagtgttcatgtatcattttt 4401328  T
Q  400 ctat 403  Q
    ||||    
T  4401327 ctat 4401324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 401
Target Start/End: Complemental strand, 14427401 - 14427346
Alignment:
Q  346 tgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
    |||||| |||||| ||| |  |||||||||||||| ||||||||||||||||||||    
T  14427401 tgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 14427346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 2e-51; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 198 - 398
Target Start/End: Original strand, 41281876 - 41282072
Alignment:
Q  198 aaaaaagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggaga 297  Q
    ||||||||||| ||| ||||||  ||||| || ||||||||||||||||||||    |||||||||||||||||||| ||||||||| || |||||||||    
T  41281876 aaaaaagagtggtgatacatgtacacccccatatggcaatacacctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagtgagaggaga 41281971  T
Q  298 tgaaagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattt 397  Q
    ||||||||||||| |||| |||||||||| |||||||||| |||||  ||||||||||||| ||| |  |||||||||||||| ||||||||||||||||    
T  41281972 tgaaagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattt 41282071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 197 - 401
Target Start/End: Complemental strand, 43114756 - 43114556
Alignment:
Q  197 taaaaaagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggag 296  Q
    |||||| ||||| ||| ||||||  ||||  |||||||||||||||||||||||    |||||||||||||||||| | ||||||||| |||||||||||    
T  43114756 taaaaatgagtggtgatacatgtacaccctcatgtggcaatacacctcttacac----ccacacaaaatcctgacaagtggcaaggaaaagggagaggag 43114661  T
Q  297 atgaaagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatt 396  Q
    |||||||||||||| |||| |||||||||| ||| |||||| |||||  ||||||||||||| ||| |  |||||||||||||| |||||||||||||||    
T  43114660 atgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatt 43114561  T
Q  397 ttcct 401  Q
    |||||    
T  43114560 ttcct 43114556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 194 - 403
Target Start/End: Complemental strand, 18491907 - 18491702
Alignment:
Q  194 atataaaaaagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagag 293  Q
    ||||||||||||||| ||| ||||||  ||||| |||||||||||||||||||||||    |||||||||||||| ||||| ||||||||| ||||| ||    
T  18491907 atataaaaaagagtggtgatacatgtacacccccatgtggcaatacacctcttacac----ccacacaaaatcctaacatgtggcaaggaaaagggatag 18491812  T
Q  294 gagatgaaagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaac 393  Q
    |||||||||||| |||| |||| |||||||||||||| |||||| | | |  |||||| |||||| ||| |  |||||||||||||| ||||||||||||    
T  18491811 gagatgaaagagtaagtatggttgtgagatgaatttaccaaaatgttcttaatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaac 18491712  T
Q  394 attttcctat 403  Q
    ||||||||||    
T  18491711 attttcctat 18491702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 228 - 398
Target Start/End: Original strand, 11825586 - 11825752
Alignment:
Q  228 atgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaat 327  Q
    |||||||||||||||||||||||    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| || | ||||||||||     
T  11825586 atgtggcaatacacctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatgattgtgagatgaaa 11825681  T
Q  328 ttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    ||| |||||| |||||  ||||||||||||| ||| |  |||||||||||||| |||||||||||||||||    
T  11825682 ttaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 11825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 200 - 401
Target Start/End: Original strand, 34895645 - 34895842
Alignment:
Q  200 aaaagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatg 299  Q
    ||||||||| ||| ||||||  ||||| |||||||||||||||||||||||    |||||||||||||||||||| ||||||||| ||||||||||||||    
T  34895645 aaaagagtggtgatacatgtacacccccatgtggcaatacacctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagggagaggagatg 34895740  T
Q  300 aaagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 399  Q
    ||||| ||||| || | |||||||||||||| ||| || |||||  ||||||||||||| ||| |  ||| |||||||| | ||||||||||||| ||||    
T  34895741 aaagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttc 34895840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 204 - 401
Target Start/End: Complemental strand, 16804160 - 16803967
Alignment:
Q  204 gagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaag 303  Q
    ||||| ||| ||||||  |||||||| || |||||||||||||||||    ||||||||||| |||||||| ||||||||| || | || ||||||||||    
T  16804160 gagtggtgatacatgtacacccctatatgacaatacacctcttacac----ccacacaaaattctgacatgtggcaaggaaaagtgtgaagagatgaaag 16804065  T
Q  304 agaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
    ||||||| |||| |||||||||| |||||||||| |||||  |||||||| |||| ||| |  |||||||||||||| ||||||||||||||||||||    
T  16804064 agaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 16803967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 204 - 401
Target Start/End: Complemental strand, 16843442 - 16843249
Alignment:
Q  204 gagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaag 303  Q
    ||||| ||| ||||||  |||||||| || |||||||||||||||||    ||||||||||| |||||||| ||||||||| || | || ||||||||||    
T  16843442 gagtggtgatacatgtacacccctatatgacaatacacctcttacac----ccacacaaaattctgacatgtggcaaggaaaagtgtgaagagatgaaag 16843347  T
Q  304 agaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
    ||||||| |||| |||||||||| |||||||||| |||||  |||||||| |||| ||| |  |||||||||||||| ||||||||||||||||||||    
T  16843346 agaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 16843249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 228 - 401
Target Start/End: Original strand, 966766 - 966935
Alignment:
Q  228 atgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaat 327  Q
    |||||| ||||||||||||||||    |||||||||||||||||||| ||||||||| |||||| |||||||||||||||||| || | |||||||||||    
T  966766 atgtggaaatacacctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagggaggggagatgaaagagaaagtatgtttgtgagatgaat 966861  T
Q  328 ttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
    ||| |||||  | | |  ||||||||||||| ||| |  |||||||||||||| ||||||||||||||||||||    
T  966862 ttaccaaaacgttcttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 966935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 228 - 400
Target Start/End: Original strand, 12415392 - 12415560
Alignment:
Q  228 atgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaat 327  Q
    ||||||||||||||||||||||    |||||||||||| ||||||||  |||| ||| ||||||||||||||||||||||||| |||| ||||||| ||     
T  12415392 atgtggcaatacacctcttaca----tccacacaaaattctgacatgtagcaaagaaaagggagaggagatgaaagagaaagtatggttgtgagataaaa 12415487  T
Q  328 ttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    ||| |||||| |||||  ||||||||||||| |||    |||||||||||||| |||||||||||||||||||    
T  12415488 ttaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12415560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 228 - 400
Target Start/End: Original strand, 12427452 - 12427620
Alignment:
Q  228 atgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaat 327  Q
    ||||||||||||||||||||||    |||||||||||| ||||||||  |||| ||| ||||||||||||||||||||||||| |||| ||||||| ||     
T  12427452 atgtggcaatacacctcttaca----tccacacaaaattctgacatgtagcaaagaaaagggagaggagatgaaagagaaagtatggttgtgagataaaa 12427547  T
Q  328 ttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    ||| |||||| |||||  ||||||||||||| |||    |||||||||||||| |||||||||||||||||||    
T  12427548 ttaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12427620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 226 - 384
Target Start/End: Original strand, 4451880 - 4452034
Alignment:
Q  226 ctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatga 325  Q
    ||||||||||||| || ||||||||    |||||||||||||||||||| || |||||| ||||||||||||||||||||||||| |||| |||||||||    
T  4451880 ctatgtggcaatatacttcttacac----ccacacaaaatcctgacatgtgggaaggaaaagggagaggagatgaaagagaaagtatggttgtgagatga 4451975  T
Q  326 atttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgt 384  Q
    ||||| ||||||||||||  |||||  |||||| |||   ||||||||||| |||||||    
T  4451976 atttaccaaaatatccctaatgcatatggtgtacaataagatgtatgattataggatgt 4452034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 200 - 336
Target Start/End: Original strand, 12531567 - 12531699
Alignment:
Q  200 aaaagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatg 299  Q
    ||||||||| ||| ||||||  ||| | || ||||||||||||||||||||    |||||||||||||||||||| ||||||||| ||||||||||||||    
T  12531567 aaaagagtgatgatacatgtacacctccatatggcaatacacctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagggagaggagatg 12531662  T
Q  300 aaagagaaagtgtggtcgtgagatgaatttatcaaaa 336  Q
    ||||||||||| |||| |||||||||||||| |||||    
T  12531663 aaagagaaagtatggttgtgagatgaatttaccaaaa 12531699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 228 - 398
Target Start/End: Original strand, 4299352 - 4299518
Alignment:
Q  228 atgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaat 327  Q
    ||||||||||||| |||||||||    |||||||||||||||||||| ||||||||| ||||||||||||| |||||| |||| || | |||||||||||    
T  4299352 atgtggcaatacatctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagggagaggagattaaagagtaagtatgattgtgagatgaat 4299447  T
Q  328 ttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    ||| |||||| ||  |  ||||||| ||||| ||| |  |||||||||||||| ||||||| |||||||||    
T  4299448 ttaccaaaatgtcattaatgcatggagtgtacaatagggtgtatgattaaagggtgttcatataacatttt 4299518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 222 - 402
Target Start/End: Complemental strand, 14285850 - 14285674
Alignment:
Q  222 acccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgag 321  Q
    ||||||||||| |||||||||||||||||    ||||| |||||||| ||||| || |||||| ||||||||||||||||||||||||| ||    ||||    
T  14285850 acccctatgtgacaatacacctcttacac----ccacataaaatcctcacatgtggtaaggaaaagggagaggagatgaaagagaaagtatgactctgag 14285755  T
Q  322 atgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 402  Q
    ||||||||| |||||||||  |  |  || ||||||| ||| |  |||||||||||||| ||||  ||||| |||||||||    
T  14285754 atgaatttaccaaaatatctttaatatatagggtgtacaatagggtgtatgattaaagggtgtttgtgtaatattttccta 14285674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 301 - 399
Target Start/End: Complemental strand, 19047256 - 19047158
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 399  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||| ||||||| ||||||||||| || |||||| ||||||||||||||||||    
T  19047256 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 19047158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 304 - 403
Target Start/End: Original strand, 8896587 - 8896686
Alignment:
Q  304 agaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 403  Q
    |||||||||| | |||||||||||||| |||||||| |||  || || ||||||| |||||||||| ||| |||||| ||||||||||||||||| ||||    
T  8896587 agaaagtgtgattgtgagatgaatttaccaaaatattcctattgtatagggtgtacaatggaatgtgtgaataaagggtgttcatgtaacatttttctat 8896686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 301 - 399
Target Start/End: Original strand, 34817777 - 34817875
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 399  Q
    ||||||||||||||| |||||||||||||| |||||| | | | |||||||||||||| ||||   ||| ||| |||||| ||||||||||||||||||    
T  34817777 aagagaaagtgtggttgtgagatgaatttaccaaaatgtgcgtagtgcatggggtgtacaatgaggtgtgtgaataaagggtgttcatgtaacattttc 34817875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 301 - 400
Target Start/End: Original strand, 13780736 - 13780835
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    ||||||||||||||| |||||||||||||||||||||||||||  || |||||||||| ||||   ||| ||| ||||   |||| ||||||||||||||    
T  13780736 aagagaaagtgtggttgtgagatgaatttatcaaaatatccctaatgtatggggtgtacaatgaggtgtgtgaataaaatgtgttgatgtaacattttcc 13780835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 301 - 400
Target Start/End: Complemental strand, 16096846 - 16096747
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| ||||||| || | | ||||||||||||  | |||||||||||||||||  |||| || |||||| |||||||||||||||||||    
T  16096846 aagataaagtgtggttgtgagattaactcaccaaaatatccctaatacatggggtgtataatggggtgtaggaataaagggtgttcatgtaacattttcc 16096747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 304 - 403
Target Start/End: Complemental strand, 42026865 - 42026764
Alignment:
Q  304 agaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaa--ggatgttcatgtaacattttcct 401  Q
    ||||||||| || |||||||||||||  ||||||||||||  |||  ||| |||| |||||||||||||| ||||  || ||||||||||||||||||||    
T  42026865 agaaagtgtagttgtgagatgaatttgccaaaatatccctaatgcgcgggatgtacaatggaatgtatgaataaattgggtgttcatgtaacattttcct 42026766  T
Q  402 at 403  Q
    ||    
T  42026765 at 42026764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 317 - 398
Target Start/End: Original strand, 6518486 - 6518566
Alignment:
Q  317 gtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    |||||||||| ||| |||||| |||||  ||||||||||||| ||| || |||||||||||||| |||||||||||||||||    
T  6518486 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagg-tgttcatgtaacatttt 6518566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 402
Target Start/End: Complemental strand, 30838731 - 30838630
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||||||||||| |||   |||||  | |||||| |||||||||||||||||||    
T  30838731 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcc 30838632  T
Q  401 ta 402  Q
    ||    
T  30838631 ta 30838630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 301 - 400
Target Start/End: Complemental strand, 1750513 - 1750414
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| |||  |||||||||||  | ||| ||||||| |||||  |||| || |||||| |||||||||||||||||||    
T  1750513 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1750414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 403
Target Start/End: Original strand, 43490402 - 43490504
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| ||||||||||  ||||||||| ||| ||||||||||||  | ||| | ||||| ||||| ||||| || |||||| ||||||||||||||||| |    
T  43490402 aagataaagtgtggttatgagatgaacttaccaaaatatccctaatacatagagtgtacaatgggatgtaggaataaagggtgttcatgtaacatttttc 43490501  T
Q  401 tat 403  Q
    |||    
T  43490502 tat 43490504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 401
Target Start/End: Original strand, 12302254 - 12302354
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| |||  |||||||||||  | ||| ||||||| |||||  ||||  | |||||| |||||||||||||||||||    
T  12302254 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 12302353  T
Q  401 t 401  Q
    |    
T  12302354 t 12302354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 200 - 288
Target Start/End: Original strand, 6518398 - 6518482
Alignment:
Q  200 aaaagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagg 288  Q
    ||||||||| ||| ||||||  ||| | ||||| |||||||||| ||||||    |||||||||||||||||||| |||||||||||||    
T  6518398 aaaagagtggtgatacatgtacacctccatgtgtcaatacaccttttacac----ccacacaaaatcctgacatgtggcaaggaagagg 6518482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 42849864 - 42849916
Alignment:
Q  306 aaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgta 358  Q
    |||||||||| |||||||||| ||||||||||||||||  | |||||||||||    
T  42849864 aaagtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgta 42849916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 401
Target Start/End: Original strand, 43335764 - 43335864
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| ||||||| || |||||||||| ||| ||||||||||||  | |||||| |||| ||||   |||| || |||| ||||||||| |||||||||||    
T  43335764 aagataaagtgtagttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtaggaataaatgatgttcatataacattttcc 43335863  T
Q  401 t 401  Q
    |    
T  43335864 t 43335864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 3e-50; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 203 - 401
Target Start/End: Complemental strand, 40237112 - 40236918
Alignment:
Q  203 agagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaa 302  Q
    |||||| ||| ||||||  ||||| |||||||||||||||||||||||    |||||||||||||||||||| ||||||||| || ||||||||||||||    
T  40237112 agagtggtgatacatgtacacccccatgtggcaatacacctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagtgagaggagatgaaa 40237017  T
Q  303 gagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
    |||||| | |||| |||||||||| ||| |||||| |||||  ||||||||||||| ||| | ||||||||||||||| ||||||||||||||||||||    
T  40237016 gagaaaatatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaataggatgtatgattaaagggtgttcatgtaacattttcct 40236918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 200 - 400
Target Start/End: Complemental strand, 31513483 - 31513287
Alignment:
Q  200 aaaagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatg 299  Q
    ||||||||| ||| ||||||  |||| |||||||||||||||||||||||    || |||||||||||||||||| ||||||||| ||||||||||||||    
T  31513483 aaaagagtggtgatacatgtacacccttatgtggcaatacacctcttaca----tctacacaaaatcctgacatgtggcaaggaaaagggagaggagatg 31513388  T
Q  300 aaagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 399  Q
    ||||||||||| |||| |||||||||||||| |||||||||| |  |||||||||| || ||| |  |||||||||||||  ||||||||||||||||||    
T  31513387 aaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtatacaatagggtgtatgattaaagagtgttcatgtaacattttc 31513288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 200 - 399
Target Start/End: Original strand, 31408537 - 31408732
Alignment:
Q  200 aaaagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatg 299  Q
    ||||||||| ||| ||||||  ||||| ||||| |||||||||||||||||    ||||| |||||||||||||| ||||||||| ||||||||||||||    
T  31408537 aaaagagtggtgatacatgtacacccccatgtgacaatacacctcttacac----ccacataaaatcctgacatgtggcaaggaaaagggagaggagatg 31408632  T
Q  300 aaagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 399  Q
    ||||||||||| |||| |||| ||||||||| |||||||||| |  |||||||| |||| ||| || |||||||||||||| ||||||||||||||||||    
T  31408633 aaagagaaagtatggttgtgaaatgaatttaccaaaatatccttaatgcatgggatgtacaatagagtgtatgattaaagggtgttcatgtaacattttc 31408732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 200 - 401
Target Start/End: Complemental strand, 33385067 - 33384869
Alignment:
Q  200 aaaagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatg 299  Q
    ||||||||| ||| ||||||  ||||| ||||| ||||||||||||||||| |||    |||||||||||| ||| ||||||||| ||||||||||||||    
T  33385067 aaaagagtggtgatacatgtaaacccccatgtgacaatacacctcttacacccat----acaaaatcctgatatgtggcaaggaaaagggagaggagatg 33384972  T
Q  300 aaagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataat-ggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    ||||||||||| || | |||||||||||||| |||||| |||||  ||||||| || || ||| ||  |||||||||||| |||||||||||||||||||    
T  33384971 aaagagaaagtatgtttgtgagatgaatttaccaaaatgtccctaatgcatggagtatacaataggggtgtatgattaaatgatgttcatgtaacatttt 33384872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 202 - 401
Target Start/End: Original strand, 27535137 - 27535332
Alignment:
Q  202 aagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaa 301  Q
    ||||||| ||| |||||| | || | ||||||||||||| ||||||||    |||||||||||| |||||||| ||||||||| | ||||||||||||||    
T  27535137 aagagtggtgatacatgtattcctccatgtggcaatacatctcttaca----tccacacaaaattctgacatgtggcaaggaaaaaggagaggagatgaa 27535232  T
Q  302 agagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
    ||||||||| | || |||||||||| ||| |||||| ||  |    ||||| ||||| ||| || |||||||||||||| ||||||||||||||||||||    
T  27535233 agagaaagtatagttgtgagatgaaattaccaaaatgtctttaacacatggagtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcct 27535332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 301 - 400
Target Start/End: Original strand, 24001013 - 24001112
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||| ||||||| ||||| ||||| || |||||| |||||||||||||||||||    
T  24001013 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 24001112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 301 - 400
Target Start/End: Original strand, 42538432 - 42538531
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||| ||||||| ||||| ||||| || |||||| |||||||||||||||||||    
T  42538432 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 42538531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 301 - 403
Target Start/End: Original strand, 24280597 - 24280699
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    ||||||||||||| | |||||||||||||| ||||||||  || ||||||||| |||| ||| |  ||||||| |||||| |||||| ||||||||||||    
T  24280597 aagagaaagtgtgattgtgagatgaatttaccaaaatatttctagtgcatgggatgtagaatagggtgtatgaataaagggtgttcacgtaacattttcc 24280696  T
Q  401 tat 403  Q
    |||    
T  24280697 tat 24280699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 301 - 398
Target Start/End: Complemental strand, 10573848 - 10573751
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    |||| |||||||||| |||||||||||||| |||||||| |||  | ||||||||||| ||| | |||||||| |||||| |||| ||||||||||||    
T  10573848 aagataaagtgtggttgtgagatgaatttaccaaaatattcctaatacatggggtgtacaataggatgtatgaataaagggtgtttatgtaacatttt 10573751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 301 - 400
Target Start/End: Complemental strand, 42972951 - 42972852
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| ||| |||||| |||||||||| ||| ||||||||||||  | |||| |||||| |||||| |||| || ||||||||||||| ||||||||||||    
T  42972951 aagataaaatgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtaggaataaaggatgttcaggtaacattttcc 42972852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 301 - 403
Target Start/End: Complemental strand, 43317542 - 43317440
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    ||||| ||||||| | |||||||||||||||||||||||||||   |||| || |||| ||||   ||||||| |||| | |||||||||||||||||||    
T  43317542 aagagtaagtgtgattgtgagatgaatttatcaaaatatccctaaagcataggatgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcc 43317443  T
Q  401 tat 403  Q
    |||    
T  43317442 tat 43317440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 398
Target Start/End: Original strand, 43343625 - 43343722
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    |||| |||||||||| |||||||||| ||||||||||||||||  | ||||||||||| ||| |  ||||  | |||| |||||||||||||||||||    
T  43343625 aagataaagtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 43343722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 306 - 403
Target Start/End: Complemental strand, 44326272 - 44326175
Alignment:
Q  306 aaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 403  Q
    |||||||||| |||||||||| ||| ||||||||||||  |  ||| |||||| ||||| |||||||| |||||| |||| |||||||||||| ||||    
T  44326272 aaagtgtggttgtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttttctat 44326175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 398
Target Start/End: Original strand, 44416935 - 44417032
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    |||| |||||||||| |||||||||| ||||||||||||||||  | ||||||||||| ||| |  ||||  | |||| |||||||||||||||||||    
T  44416935 aagataaagtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 44417032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 5015494 - 5015394
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | |||| |||||| |||||| ||||  | |||||  |||||||||||||||||||    
T  5015494 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 5015395  T
Q  401 t 401  Q
    |    
T  5015394 t 5015394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 301 - 400
Target Start/End: Original strand, 5810925 - 5811024
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||||||||||||||||  |  || ||||||| |||||  |||| || |||||| || ||||||||||||||||    
T  5810925 aagataaagtgtggttgtgagatgaacttatcaaaatatccctaatatatagggtgtacaatggggtgtaggaataaagggtggtcatgtaacattttcc 5811024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 301 - 402
Target Start/End: Original strand, 5194232 - 5194333
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    ||||| ||||||| | ||||||||||||||||||||||||| |    ||| ||||||| ||||   ||||||| |||| | |||||||||||||||||||    
T  5194232 aagagtaagtgtgattgtgagatgaatttatcaaaatatccttaaaacatagggtgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcc 5194331  T
Q  401 ta 402  Q
    ||    
T  5194332 ta 5194333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 301 - 402
Target Start/End: Complemental strand, 35069820 - 35069719
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | |||| |||||| ||||   |||| || |||||  |||||||||||||||||||    
T  35069820 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagagtgttcatgtaacattttcc 35069721  T
Q  401 ta 402  Q
    ||    
T  35069720 ta 35069719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 403
Target Start/End: Complemental strand, 9216400 - 9216299
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| ||| |||||| |||||||||| ||| ||||||||| ||  |||||||| |||| ||| | || || || |||||| |||||||||||||||||||    
T  9216400 aagataaaatgtggttgtgagatgaacttaccaaaatatctctaatgcatggg-tgtacaataggatataggaataaagggtgttcatgtaacattttcc 9216302  T
Q  401 tat 403  Q
    |||    
T  9216301 tat 9216299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 398
Target Start/End: Original strand, 4638200 - 4638297
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    |||| ||||| |||| |||||||||| ||| |||||||||| |  |  |||||||||| ||| || ||||||| |||| | |||||||||||||||||    
T  4638200 aagataaagtatggttgtgagatgaacttaccaaaatatccataatatatggggtgtacaattgagtgtatgaataaaaggtgttcatgtaacatttt 4638297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 364
Target Start/End: Original strand, 32029818 - 32029881
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatgg 364  Q
    |||| |||||||||| || ||||||||||| ||||||||||||  | ||||||||||| |||||    
T  32029818 aagataaagtgtggttgttagatgaatttaccaaaatatccctaatacatggggtgtacaatgg 32029881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 400
Target Start/End: Complemental strand, 39998475 - 39998408
Alignment:
Q  333 aaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||||||||||  | ||||||||||| ||| | |||||||||||||   |||||||||||||||||||    
T  39998475 aaaatatccctaatacatggggtgtacaataggatgtatgattaaaatgtgttcatgtaacattttcc 39998408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 41861775 - 41861673
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctgg--tgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    |||| |||||||||| ||||||| || ||| ||||||||| ||    | ||| ||||||||||| |  ||||||| |||||| |||||||||||||||||    
T  41861775 aagataaagtgtggttgtgagataaacttaccaaaatatctctataatacatagggtgtataattgggtgtatgaataaagggtgttcatgtaacatttt 41861676  T
Q  399 cct 401  Q
    |||    
T  41861675 cct 41861673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 400
Target Start/End: Complemental strand, 45326119 - 45326020
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||| | |||||||||| ||| ||||||||||||  |  |||||||||| ||||  |||||||| |||| | |||| |||||||| |||||    
T  45326119 aagataaagtgtgattgtgagatgaacttaccaaaatatccctaatatatggggtgtacaatgtgatgtatgaataaaaggtgtttatgtaacactttcc 45326020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 1e-49; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 222 - 403
Target Start/End: Complemental strand, 17208248 - 17208071
Alignment:
Q  222 acccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgag 321  Q
    ||||||||||| ||||||||||||||||    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| |||||    
T  17208248 acccctatgtgacaatacacctcttaca----tccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgag 17208153  T
Q  322 atgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 403  Q
    ||||||||| |||||| ||| |  ||||||||||||| |||  | |||||||||||||| |||||| |||||||||||||||    
T  17208152 atgaatttaccaaaatgtccttaatgcatggggtgtacaataaagtgtatgattaaagggtgttcacgtaacattttcctat 17208071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 228 - 400
Target Start/End: Original strand, 32473326 - 32473494
Alignment:
Q  228 atgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaat 327  Q
    |||||||||||||||||||||||    ||||||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| |||| ||||||||||     
T  32473326 atgtggcaatacacctcttacac----ccacacaaaattctgacatgtggcaaagaaaagggagaggagatgaaagagaaagtatggttgtgagatgaaa 32473421  T
Q  328 ttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    ||| ||||||||||||  |||||| |||||| |||    |||||||||||||| |||||||||||||||||||    
T  32473422 ttaccaaaatatccctaatgcatgtggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 32473494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 204 - 401
Target Start/End: Original strand, 30622627 - 30622819
Alignment:
Q  204 gagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaag 303  Q
    ||||| ||| ||||||  ||||| |||||||||||||||||||||||    |||||||||||  ||||||| ||||||||| || |||||||||||||||    
T  30622627 gagtggtgatacatgtacacccccatgtggcaatacacctcttacac----ccacacaaaattttgacatgtggcaaggaaaagagagaggagatgaaag 30622722  T
Q  304 agaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
    ||||||| |||| ||||||| |||||| |||||||||| |  |||||||| | || ||| |  |||||||||||||||||||||||||||||||||||    
T  30622723 agaaagtatggttgtgagataaatttaccaaaatatccttaatgcatgggct-tacaatagggtgtatgattaaaggatgttcatgtaacattttcct 30622819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 7617232 - 7617132
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | |||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  7617232 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtataatggagtgtatgaataaagggtgttcatgtaacattttcc 7617133  T
Q  401 t 401  Q
    |    
T  7617132 t 7617132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 38470678 - 38470578
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||| | |||| ||||||||| |||||||||| |  | ||||||||||| |||||||||||||| |||||| |||| ||||||||||||||    
T  38470678 aagataaagtgtgattgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatggaatgtatgaataaagggtgtttatgtaacattttcc 38470579  T
Q  401 t 401  Q
    |    
T  38470578 t 38470578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 301 - 400
Target Start/End: Original strand, 2614650 - 2614749
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||| ||||||| ||||| ||||| || |||||| |||||||||||||||||||    
T  2614650 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 2614749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 301 - 400
Target Start/End: Complemental strand, 22512404 - 22512305
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||||| ||||| |||||| |||| || |||||| |||||||||||||||||||    
T  22512404 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 22512305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 301 - 400
Target Start/End: Original strand, 41334664 - 41334763
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||| ||||||||||||   ||||||| |||||| |||||||||||||||||||    
T  41334664 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaagggtgttcatgtaacattttcc 41334763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 301 - 398
Target Start/End: Complemental strand, 5257094 - 5256997
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||||||||||| ||||| |||||||| |||| | |||| ||||||||||||    
T  5257094 aagataaagtgtggttgtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 5256997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 18034081 - 18033981
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| |||  |||||||||||  | ||| ||||||| |||||| |||| || |||||| |||||||||||||||||||    
T  18034081 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 18033982  T
Q  401 t 401  Q
    |    
T  18033981 t 18033981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 33801568 - 33801468
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| |||  |||||||||||  | ||||| ||||| |||||  ||||  | ||||||||||||||||||||||||||    
T  33801568 aagataaagtgtggttgtgagatgaacttactaaaatatccctaatacatggagtgtacaatggggtgtagaaataaaggatgttcatgtaacattttcc 33801469  T
Q  401 t 401  Q
    |    
T  33801468 t 33801468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 2e-48; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 202 - 401
Target Start/End: Complemental strand, 34304981 - 34304787
Alignment:
Q  202 aagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaa 301  Q
    ||||||| ||| ||||||  ||||| |||||||||||||||||||||||    ||| |||||||||||||||| ||||||||| || |||||||||||||    
T  34304981 aagagtggtgatacatgtacacccc-atgtggcaatacacctcttacac----ccaaacaaaatcctgacatgtggcaaggaaaagtgagaggagatgaa 34304887  T
Q  302 agagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
    ||||||||| |||| |||||||||| ||| |||||| |||||  ||||||||||||| ||| |  |||||||||||||||||||||||||||||||||||    
T  34304886 agagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcct 34304787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 228 - 401
Target Start/End: Complemental strand, 35181684 - 35181515
Alignment:
Q  228 atgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaat 327  Q
    |||||||||||||||||||||||    |||||||||||||||||||| ||||||||| || |||||||||||||||||||||| |||| ||||||||||     
T  35181684 atgtggcaatacacctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagtgagaggagatgaaagagaaagtatggttgtgagatgaaa 35181589  T
Q  328 ttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
    ||| |||||| |||||  ||||||||||||| ||| |  |||||||||||||| ||||||||||||||||||||    
T  35181588 ttaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 35181515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 231 - 402
Target Start/End: Original strand, 18066653 - 18066820
Alignment:
Q  231 tggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaattta 330  Q
    ||||||||||||||||||||    ||||| ||||| |||||||| ||||||||| | ||||||||||||||||||||||| |||| |||||||||| |||    
T  18066653 tggcaatacacctcttacac----ccacataaaattctgacatgtggcaaggaaaatggagaggagatgaaagagaaagtatggttgtgagatgaaatta 18066748  T
Q  331 tcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttccta 402  Q
      |||||||||||  | |||||| |||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  18066749 ctaaaatatccctaatacatgggatgtacaatagaatgtatgattaaagggtgttcatgtaacattttccta 18066820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 261 - 403
Target Start/End: Original strand, 16603587 - 16603729
Alignment:
Q  261 aaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtata 360  Q
    |||||||||||||| ||||||||| |||||||||||||||||||| |||| |||| |||||||||||||| |||||| ||  |  |||||||||||||||    
T  16603587 aaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagtaagtatggttgtgagatgaatttaccaaaatgtctttaatgcatggggtgtata 16603686  T
Q  361 atggaatgtatgattaaaggatgttcatgtaacattttcctat 403  Q
    ||    |||||||||||||| ||| ||||||||||||||||||    
T  16603687 ataaggtgtatgattaaagggtgtgcatgtaacattttcctat 16603729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 204 - 337
Target Start/End: Original strand, 10678060 - 10678189
Alignment:
Q  204 gagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaag 303  Q
    ||||| ||| ||||||  ||||| ||||||||||||| |||||||||    |||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  10678060 gagtggtgatacatgtacacccccatgtggcaatacatctcttacac----ccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaag 10678155  T
Q  304 agaaagtgtggtcgtgagatgaatttatcaaaat 337  Q
    ||||||| |||| |||||||||||||| ||||||    
T  10678156 agaaagtatggttgtgagatgaatttaccaaaat 10678189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 222 - 398
Target Start/End: Original strand, 33629919 - 33630091
Alignment:
Q  222 acccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgag 321  Q
    ||||| |||||||||||||||||||||||    | |||||||||  ||||||| ||||| ||| ||||||||||||||||||||||||| | || |||||    
T  33629919 acccccatgtggcaatacacctcttacac----ctacacaaaattttgacatgtggcaaagaaaagggagaggagatgaaagagaaagtatagttgtgag 33630014  T
Q  322 atgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    ||||| |||  ||||| |||||  ||||| ||||||| ||||   |||||||||||||| ||||| |||||||||||    
T  33630015 atgaaattactaaaatgtccctaatgcatagggtgtacaatgaggtgtatgattaaagggtgttcgtgtaacatttt 33630091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 222 - 399
Target Start/End: Original strand, 16358759 - 16358933
Alignment:
Q  222 acccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgag 321  Q
    ||||| || ||||||||||||||||| ||    ||||| |||||| ||||||| |||||| || ||||||||||||||||| ||||||| |||| |||||    
T  16358759 acccccatatggcaatacacctcttatac----ccacataaaatcatgacatgtggcaagaaaaagggagaggagatgaaaaagaaagtatggttgtgag 16358854  T
Q  322 atgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttc-atgtaacattttc 399  Q
    |||||||||||||||||| | |  |||||||| |||| ||| |  |||||||||||||| | ||| |||||||||||||    
T  16358855 atgaatttatcaaaatattcttaatgcatgggatgtacaatagggtgtatgattaaagggtcttcaatgtaacattttc 16358933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 255 - 401
Target Start/End: Original strand, 19386520 - 19386671
Alignment:
Q  255 ccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatg--- 351  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| | || |||||||||||||||||||| || | |  ||||||       
T  19386520 ccacacaaaatcctgacatgtggcaaggaaaagggagaggagatgaaagagaaagtatagttgtgagatgaatttatcaaaacattcttaatgcatgaaa 19386619  T
Q  352 --gggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcct 401  Q
      |   ||||||| |  |||||||||||||| ||||||||||||||||||||    
T  19386620 gagaaagtataatagggtgtatgattaaagggtgttcatgtaacattttcct 19386671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 398
Target Start/End: Complemental strand, 26125734 - 26125637
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||| ||||||| |||||||||||||| |||||| |||| ||||||||||||    
T  26125734 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtatgaataaagggtgtttatgtaacatttt 26125637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 301 - 401
Target Start/End: Original strand, 36743484 - 36743584
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||| ||||||| ||||| ||||| || |||||| |||||||||||||||||||    
T  36743484 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 36743583  T
Q  401 t 401  Q
    |    
T  36743584 t 36743584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 301 - 400
Target Start/End: Complemental strand, 11582865 - 11582766
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||| ||||||| ||||| ||||| || |||||| |||||||||||||||||||    
T  11582865 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 11582766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 301 - 400
Target Start/End: Complemental strand, 29705461 - 29705362
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||||||||||||||||  | ||||||||||| |||||  ||||  | |||||| |||||||||||||||||||    
T  29705461 aagataaagtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 29705362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 301 - 403
Target Start/End: Original strand, 29800951 - 29801053
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||||||||||| ||||| |||||||| |||| | |||| |||||||||||| |    
T  29800951 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttttc 29801050  T
Q  401 tat 403  Q
    |||    
T  29801051 tat 29801053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 301 - 403
Target Start/End: Complemental strand, 31384763 - 31384661
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| |||||||| |||  | ||||||||||| ||| ||||||| || |||||| ||||||||||| | |||||    
T  31384763 aagataaagtgtggttgtgagatgaacttaccaaaatattcctaatacatggggtgtacaatagaatgtaagaataaagggtgttcatgtaatactttcc 31384664  T
Q  401 tat 403  Q
    |||    
T  31384663 tat 31384661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 306 - 403
Target Start/End: Complemental strand, 20148854 - 20148757
Alignment:
Q  306 aaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcctat 403  Q
    |||||||||| |||||||||| ||| ||||||||||||  |  ||| |||||| ||||| |||||||| |||||| |||| |||||||||||| ||||    
T  20148854 aaagtgtggttgtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttttctat 20148757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 5755002 - 5754902
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  |  ||||| |||| ||||| ||||| || |||| | |||||||||||||||||||    
T  5755002 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatatatgggatgtacaatgggatgtaggaataaaaggtgttcatgtaacattttcc 5754903  T
Q  401 t 401  Q
    |    
T  5754902 t 5754902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 301 - 401
Target Start/End: Original strand, 30660743 - 30660843
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| || ||||||| ||| ||||||||||||  | ||| ||||||| ||||| |||||  | |||||| |||||||||||||||||||    
T  30660743 aagataaagtgtggttgtaagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagaaataaagggtgttcatgtaacattttcc 30660842  T
Q  401 t 401  Q
    |    
T  30660843 t 30660843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 403
Target Start/End: Complemental strand, 2547095 - 2546993
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| |||  |||||||||||  | |||| |||||| |||||| ||||  | |||||  |||||||||||||||||||    
T  2547095 aagataaagtgtggttgtgagatgaacttactaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 2546996  T
Q  401 tat 403  Q
    |||    
T  2546995 tat 2546993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 301 - 398
Target Start/End: Complemental strand, 42295294 - 42295197
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||||| ||||| ||||   |||| || |||||| |||||||||||||||||    
T  42295294 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 42295197  T

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Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 402
Target Start/End: Original strand, 42197436 - 42197537
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||| | ||||  |||||  |||| || |||| | |||||||||||||||||||    
T  42197436 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagtgtgtgcaatggggtgtaggaataaatggtgttcatgtaacattttcc 42197535  T
Q  401 ta 402  Q
    ||    
T  42197536 ta 42197537  T

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Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 400
Target Start/End: Complemental strand, 1375641 - 1375542
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| ||||||| || ||||||| |||||| ||||||||||||  |  |||||||||| ||| |  ||||||| |||| | ||||||||||| |||||||    
T  1375641 aagataaagtgtagttgtgagataaatttaccaaaatatccctaatatatggggtgtacaattgggtgtatgaataaaaggtgttcatgtaaaattttcc 1375542  T

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Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 364
Target Start/End: Original strand, 40528635 - 40528698
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatgg 364  Q
    ||||||||||||||| ||||||| ||||||||||||| |||||  |  |||||||||| |||||    
T  40528635 aagagaaagtgtggttgtgagataaatttatcaaaatgtccctaatatatggggtgtacaatgg 40528698  T

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Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 301 - 399
Target Start/End: Complemental strand, 45397415 - 45397317
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 399  Q
    |||| ||| |||||| |||||||||| |||  |||||||||||  | ||| ||||||| |||||  |||| || |||||| |||||| |||||||||||    
T  45397415 aagataaattgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtagaatggggtgtaggaataaagggtgttcacgtaacattttc 45397317  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 398
Target Start/End: Complemental strand, 3743870 - 3743773
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    |||| |||||||||| |||||||||| |||||||||||| | |  |  |||||||||||||||| | | |||| |||||| |||  ||| ||||||||    
T  3743870 aagataaagtgtggttgtgagatgaacttatcaaaatatacttaatatatggggtgtataatgggagggatgaataaagggtgtatatggaacatttt 3743773  T

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Target: scaffold0003 (Bit Score: 88; Significance: 7e-42; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 202 - 398
Target Start/End: Original strand, 45625 - 45817
Alignment:
Q  202 aagagtgttgacacatgtgtacccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaa 301  Q
    ||||||| ||| ||||||  || || |||||||||||||||||||||||    ||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  45625 aagagtggtgatacatgtacacacccatgtggcaatacacctcttacac----ccacataaaatcctgacatgtggcaaggaaaagggagaggagatgaa 45720  T
Q  302 agagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacatttt 398  Q
    ||||||||| |||| |||||||||||||| |||||||||| |  | ||| || |||| ||| |  |||||||||||||| |||||||||||||||||    
T  45721 agagaaagtatggttgtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 45817  T

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Target: scaffold0100 (Bit Score: 82; Significance: 3e-38; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 222 - 400
Target Start/End: Original strand, 35382 - 35556
Alignment:
Q  222 acccctatgtggcaatacacctcttacacacatccacacaaaatcctgacatggggcaaggaagagggagaggagatgaaagagaaagtgtggtcgtgag 321  Q
    ||||| ||||||||||||||||||||||| |||    ||||||||| |||||| ||||||||| ||||||||||||||||||||||||| |||| |||||    
T  35382 acccccatgtggcaatacacctcttacacccat----acaaaatccagacatgcggcaaggaaaagggagaggagatgaaagagaaagtatggttgtgag 35477  T
Q  322 atgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    ||||||||| ||| || |||||  ||||||||||||| |||    |||||||||||| | |||| ||||||||||||||    
T  35478 atgaatttaccaatatgtccctaatgcatggggtgtacaatatggtgtatgattaaatggtgtttatgtaacattttcc 35556  T

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Target: scaffold0038 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 301 - 399
Target Start/End: Complemental strand, 112754 - 112656
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttc 399  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | ||| ||||||| ||||||||||| || |||||| ||||||||||||||||||    
T  112754 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 112656  T

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Target: scaffold0385 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 11350 - 11250
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  |  |||||||||| |||||  ||||||| |||||  ||||||||| |||||||||    
T  11350 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatatatggggtgtacaatggggtgtatgaataaagtgtgttcatgtgacattttcc 11251  T
Q  401 t 401  Q
    |    
T  11250 t 11250  T

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Target: scaffold0119 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 784 - 684
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| ||| ||||||||||||  | |||| |||||| ||||   |||| || |||||| |||||||||||||||||||    
T  784 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 685  T
Q  401 t 401  Q
    |    
T  684 t 684  T

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Target: scaffold0187 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 403
Target Start/End: Original strand, 14189 - 14291
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| |||  |||||||||||  | ||| || |||| |||||  ||||  | |||||| |||||||||||||||||||    
T  14189 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 14288  T
Q  401 tat 403  Q
    |||    
T  14289 tat 14291  T

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Target: scaffold0187; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 403
Target Start/End: Original strand, 24517 - 24619
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||||| |||||||||| |||  |||||||||||  | ||| || |||| |||||  ||||  | |||||| |||||||||||||||||||    
T  24517 aagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 24616  T
Q  401 tat 403  Q
    |||    
T  24617 tat 24619  T

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Target: scaffold0157 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 400
Target Start/End: Original strand, 23422 - 23521
Alignment:
Q  301 aagagaaagtgtggtcgtgagatgaatttatcaaaatatccctggtgcatggggtgtataatggaatgtatgattaaaggatgttcatgtaacattttcc 400  Q
    |||| |||||||| | || ||||||| ||| ||||||||| ||  | |||||| |||| |||||| |||| || |||||| ||||||| |||||||||||    
T  23422 aagataaagtgtgattgtaagatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 23521  T

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