View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9262_low_58 (Length: 315)
Name: NF9262_low_58
Description: NF9262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9262_low_58 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 298
Target Start/End: Complemental strand, 26806679 - 26806400
Alignment:
| Q |
18 |
catttttagagtttgttggataggataatgggaaattaagagaaattataattttaagcaattcgaaagcttcaattccattcannnnnnnnnnnnnnnn |
117 |
Q |
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| T |
26806679 |
catttttagagtttgttggataggataatgggaaattaagagaaattataattttaagcaattcgaaagcttcaattc-attcatttttaatttttttt- |
26806582 |
T |
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| Q |
118 |
catttgaatagagtaataaaattctccattctcaaaatagggactaatttacaaaatttgataatctaggtttgttaattttgaaaaaa-tatataagga |
216 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
26806581 |
catttgaatagagtaataaaattctcgattctcaaaatagggactaatttacaaaatttgataatctaggtttgttaattttgaaaaaaatatataagga |
26806482 |
T |
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| Q |
217 |
ccaatttggaattttttaaaagtatttattggaaaactttgtgaatttataaaatacagggaccatctccaaaatttatact |
298 |
Q |
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||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
26806481 |
ccaatttgggattttttagaagtatttattggaaaactttgtaaatttataaaatacagggaccatctccaaaatttatact |
26806400 |
T |
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