View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9262_low_65 (Length: 267)
Name: NF9262_low_65
Description: NF9262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9262_low_65 |
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Alignment Details
Target: chr4 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 23 - 252
Target Start/End: Complemental strand, 7465641 - 7465412
Alignment:
| Q |
23 |
atatgccatagccagtgcctgagagtaatctttttgcaagccatccaatacttttgtatttcttctattccaaagactccataaaaccatgcaaaatgag |
122 |
Q |
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| T |
7465641 |
atatgccatagccagtgcctgagagtaatctttttgcaagccatccaatacttttgtatttcttctattccaaagactccataaaaccatgcgaaatgag |
7465542 |
T |
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| Q |
123 |
gccaaaactccattatccagcaactgacagactttgaaaaacacctctgnnnnnnntggatgcacgtgccataatttggctgagtccgcccttgattccc |
222 |
Q |
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| T |
7465541 |
gccaaaactccattatccagcaactgacagactttgaaaaacacctctgaaaaaaatggatgcacgtgccataatttgcctgagtccgcccttgattccc |
7465442 |
T |
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| Q |
223 |
atattctgctcacattcaacactgcacagg |
252 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
7465441 |
atattctgctcacattcaacactgcacagg |
7465412 |
T |
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