View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9262_low_71 (Length: 243)

Name: NF9262_low_71
Description: NF9262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9262_low_71
NF9262_low_71
[»] chr5 (54 HSPs)
chr5 (1-77)||(25675758-25675834)
chr5 (1-77)||(25534277-25534353)
chr5 (3-77)||(20084654-20084728)
chr5 (3-77)||(20098256-20098330)
chr5 (3-77)||(22957757-22957831)
chr5 (3-77)||(25827384-25827458)
chr5 (160-217)||(1206832-1206889)
chr5 (1-77)||(25527593-25527669)
chr5 (2-77)||(21727120-21727195)
chr5 (2-77)||(26185230-26185305)
chr5 (3-77)||(23689577-23689651)
chr5 (2-77)||(11937813-11937888)
chr5 (2-77)||(11951737-11951812)
chr5 (2-77)||(15777801-15777876)
chr5 (2-77)||(15792036-15792111)
chr5 (2-77)||(21689973-21690048)
chr5 (2-77)||(21697892-21697967)
chr5 (2-77)||(34312440-34312515)
chr5 (3-77)||(1807280-1807354)
chr5 (3-77)||(5433708-5433782)
chr5 (3-77)||(5447524-5447598)
chr5 (3-77)||(7253300-7253374)
chr5 (3-77)||(7260743-7260817)
chr5 (3-77)||(12385521-12385595)
chr5 (3-77)||(12394214-12394288)
chr5 (3-77)||(15955609-15955683)
chr5 (3-77)||(17949864-17949938)
chr5 (3-77)||(17963753-17963827)
chr5 (3-77)||(21826113-21826187)
chr5 (3-77)||(23575413-23575487)
chr5 (3-77)||(25040860-25040934)
chr5 (3-77)||(25448534-25448608)
chr5 (3-77)||(26546502-26546576)
chr5 (3-77)||(31513075-31513149)
chr5 (3-77)||(31527200-31527274)
chr5 (3-74)||(23376894-23376965)
chr5 (3-77)||(1799547-1799621)
chr5 (3-77)||(7788228-7788302)
chr5 (3-77)||(7796078-7796152)
chr5 (3-77)||(18957213-18957287)
chr5 (3-77)||(21829271-21829345)
chr5 (3-77)||(22705929-22706003)
chr5 (110-157)||(13358439-13358486)
chr5 (2-77)||(23766255-23766330)
chr5 (2-77)||(23816103-23816178)
chr5 (2-77)||(36369389-36369464)
chr5 (2-77)||(36383317-36383392)
chr5 (2-77)||(36994051-36994126)
chr5 (2-77)||(37007989-37008064)
chr5 (3-77)||(26870442-26870516)
chr5 (97-151)||(30249354-30249408)
chr5 (6-64)||(40183203-40183261)
chr5 (3-77)||(33304347-33304421)
chr5 (2-40)||(21806860-21806897)
[»] scaffold0084 (1 HSPs)
scaffold0084 (3-77)||(34862-34936)
[»] scaffold0019 (2 HSPs)
scaffold0019 (1-77)||(20394-20470)
scaffold0019 (1-77)||(12137-12214)
[»] chr8 (16 HSPs)
chr8 (1-77)||(23640350-23640426)
chr8 (3-77)||(39639165-39639239)
chr8 (2-77)||(23899407-23899482)
chr8 (3-77)||(21473384-21473458)
chr8 (2-76)||(23814650-23814724)
chr8 (3-77)||(32024229-32024303)
chr8 (1-77)||(30679424-30679500)
chr8 (6-77)||(24483506-24483577)
chr8 (3-77)||(23266136-23266210)
chr8 (3-77)||(27324215-27324288)
chr8 (3-77)||(27806504-27806578)
chr8 (3-77)||(39629615-39629689)
chr8 (2-77)||(15448222-15448297)
chr8 (2-77)||(15708973-15709047)
chr8 (3-77)||(6032602-6032676)
chr8 (2-77)||(15059372-15059446)
[»] scaffold0435 (1 HSPs)
scaffold0435 (2-77)||(6391-6466)
[»] scaffold0107 (1 HSPs)
scaffold0107 (2-77)||(980-1055)
[»] chr7 (52 HSPs)
chr7 (2-77)||(15764783-15764858)
chr7 (3-77)||(20029285-20029359)
chr7 (3-77)||(20541524-20541598)
chr7 (1-77)||(43004275-43004351)
chr7 (1-77)||(46460710-46460786)
chr7 (1-76)||(18155952-18156027)
chr7 (2-77)||(30363191-30363266)
chr7 (2-77)||(30377256-30377331)
chr7 (3-77)||(4891492-4891566)
chr7 (3-77)||(5647156-5647230)
chr7 (3-77)||(8955435-8955509)
chr7 (3-77)||(42015747-42015821)
chr7 (97-159)||(44413284-44413346)
chr7 (96-160)||(43005639-43005703)
chr7 (2-77)||(4854388-4854463)
chr7 (97-160)||(18157299-18157362)
chr7 (6-77)||(42629415-42629486)
chr7 (3-77)||(6850638-6850712)
chr7 (3-77)||(8811841-8811915)
chr7 (3-77)||(8819656-8819730)
chr7 (3-77)||(8911216-8911290)
chr7 (3-77)||(9462342-9462416)
chr7 (3-77)||(9476100-9476174)
chr7 (3-77)||(16386647-16386721)
chr7 (3-77)||(16400774-16400848)
chr7 (3-77)||(19096133-19096207)
chr7 (3-77)||(19242426-19242500)
chr7 (3-77)||(23876727-23876801)
chr7 (3-77)||(23885583-23885657)
chr7 (3-77)||(28416526-28416600)
chr7 (3-77)||(35091539-35091613)
chr7 (3-77)||(36900442-36900516)
chr7 (3-64)||(17014083-17014144)
chr7 (3-77)||(839572-839646)
chr7 (3-77)||(1204752-1204826)
chr7 (3-77)||(34131398-34131472)
chr7 (7-77)||(46298764-46298834)
chr7 (6-77)||(3083032-3083103)
chr7 (2-77)||(5765552-5765627)
chr7 (3-74)||(12979879-12979950)
chr7 (3-77)||(34137692-34137765)
chr7 (22-77)||(355850-355905)
chr7 (3-42)||(15685650-15685689)
chr7 (3-77)||(3334744-3334818)
chr7 (97-159)||(46462067-46462129)
chr7 (2-51)||(34359895-34359944)
chr7 (6-77)||(846747-846818)
chr7 (6-77)||(854122-854193)
chr7 (6-77)||(1212126-1212197)
chr7 (108-159)||(23443600-23443651)
chr7 (3-77)||(16271367-16271441)
chr7 (3-77)||(35077016-35077090)
[»] chr6 (46 HSPs)
chr6 (2-77)||(1551517-1551592)
chr6 (2-77)||(24141598-24141673)
chr6 (2-77)||(24148088-24148163)
chr6 (3-77)||(20049054-20049128)
chr6 (3-77)||(20056915-20056989)
chr6 (96-159)||(18909125-18909188)
chr6 (2-77)||(25505106-25505181)
chr6 (3-77)||(614036-614110)
chr6 (3-77)||(621956-622030)
chr6 (3-77)||(9129891-9129965)
chr6 (3-77)||(9143727-9143801)
chr6 (3-77)||(15664325-15664399)
chr6 (3-77)||(21963452-21963526)
chr6 (3-77)||(26897878-26897952)
chr6 (3-77)||(27511365-27511439)
chr6 (3-77)||(27519308-27519382)
chr6 (3-77)||(30435348-30435422)
chr6 (97-161)||(22232579-22232643)
chr6 (2-77)||(25493033-25493108)
chr6 (3-77)||(8277399-8277473)
chr6 (3-77)||(8285278-8285352)
chr6 (3-77)||(14073150-14073224)
chr6 (3-77)||(16323704-16323778)
chr6 (3-77)||(16815049-16815123)
chr6 (3-77)||(16823804-16823878)
chr6 (3-77)||(18091169-18091243)
chr6 (3-77)||(18910493-18910567)
chr6 (3-77)||(20038849-20038923)
chr6 (3-77)||(20046656-20046730)
chr6 (3-77)||(22073980-22074054)
chr6 (3-77)||(22325285-22325359)
chr6 (3-77)||(26980482-26980556)
chr6 (3-77)||(27072872-27072946)
chr6 (8-77)||(22331038-22331107)
chr6 (9-77)||(20451221-20451289)
chr6 (9-77)||(20458040-20458108)
chr6 (97-159)||(3917570-3917632)
chr6 (3-77)||(10983619-10983693)
chr6 (3-77)||(18386836-18386910)
chr6 (6-77)||(3916170-3916241)
chr6 (3-77)||(18963515-18963589)
chr6 (3-77)||(19171042-19171114)
chr6 (7-64)||(18396072-18396129)
chr6 (114-159)||(14779974-14780019)
chr6 (22-74)||(14777540-14777592)
chr6 (9-77)||(22231186-22231254)
[»] chr3 (63 HSPs)
chr3 (2-77)||(8617866-8617941)
chr3 (3-77)||(11182836-11182910)
chr3 (2-77)||(8625738-8625813)
chr3 (2-77)||(9553648-9553723)
chr3 (2-77)||(11628022-11628097)
chr3 (2-77)||(15911312-15911387)
chr3 (2-77)||(15925555-15925630)
chr3 (2-77)||(18694300-18694375)
chr3 (2-77)||(21609173-21609248)
chr3 (2-77)||(21617801-21617876)
chr3 (2-77)||(33814317-33814392)
chr3 (97-160)||(35491055-35491118)
chr3 (2-77)||(48059308-48059383)
chr3 (3-77)||(12559250-12559324)
chr3 (3-77)||(18709675-18709749)
chr3 (3-77)||(19835328-19835402)
chr3 (3-77)||(46391550-46391624)
chr3 (3-77)||(46399298-46399372)
chr3 (6-77)||(2227082-2227153)
chr3 (2-77)||(8805727-8805802)
chr3 (2-77)||(8814127-8814202)
chr3 (2-77)||(9523933-9524008)
chr3 (2-77)||(12470975-12471050)
chr3 (2-77)||(37254253-37254328)
chr3 (2-77)||(37264093-37264168)
chr3 (3-77)||(5649769-5649843)
chr3 (3-77)||(5944131-5944205)
chr3 (3-77)||(5958243-5958317)
chr3 (3-77)||(6195793-6195867)
chr3 (3-77)||(6203377-6203451)
chr3 (3-77)||(8607572-8607646)
chr3 (3-77)||(8614035-8614109)
chr3 (3-77)||(12556450-12556523)
chr3 (3-77)||(14322751-14322825)
chr3 (3-77)||(15527139-15527213)
chr3 (3-77)||(15535828-15535902)
chr3 (3-77)||(15577325-15577399)
chr3 (3-77)||(16029931-16030005)
chr3 (3-77)||(49965213-49965287)
chr3 (6-77)||(2253302-2253373)
chr3 (2-77)||(15621850-15621925)
chr3 (2-77)||(15629200-15629275)
chr3 (7-77)||(29125-29195)
chr3 (3-77)||(15608349-15608423)
chr3 (3-77)||(20602144-20602218)
chr3 (3-77)||(39873580-39873654)
chr3 (3-77)||(46373049-46373123)
chr3 (3-77)||(46387176-46387250)
chr3 (3-64)||(18693001-18693062)
chr3 (3-64)||(18708371-18708432)
chr3 (6-77)||(4312193-4312264)
chr3 (2-77)||(33573262-33573337)
chr3 (3-77)||(52504700-52504774)
chr3 (3-64)||(22238217-22238278)
chr3 (9-77)||(23280838-23280906)
chr3 (9-77)||(23286737-23286805)
chr3 (7-65)||(24608802-24608860)
chr3 (1-33)||(14879825-14879857)
chr3 (1-33)||(14891678-14891710)
chr3 (96-159)||(17218096-17218159)
chr3 (110-149)||(37468058-37468097)
chr3 (3-77)||(6970957-6971031)
chr3 (119-159)||(44363482-44363522)
[»] chr2 (29 HSPs)
chr2 (2-77)||(12368585-12368660)
chr2 (3-77)||(24700364-24700438)
chr2 (2-77)||(21070372-21070447)
chr2 (2-77)||(22516866-22516941)
chr2 (6-77)||(45487293-45487364)
chr2 (2-77)||(16931-17006)
chr2 (2-77)||(17331653-17331728)
chr2 (3-77)||(378395-378469)
chr2 (3-77)||(12376438-12376512)
chr2 (3-77)||(12390265-12390339)
chr2 (3-77)||(18971813-18971886)
chr2 (3-77)||(18991479-18991553)
chr2 (3-77)||(22936188-22936262)
chr2 (3-77)||(22942151-22942225)
chr2 (3-77)||(22956046-22956120)
chr2 (97-159)||(24690113-24690175)
chr2 (3-77)||(24691526-24691600)
chr2 (97-159)||(24699464-24699526)
chr2 (3-77)||(29756250-29756324)
chr2 (3-77)||(39651422-39651496)
chr2 (3-77)||(38083103-38083177)
chr2 (96-160)||(18973130-18973194)
chr2 (3-74)||(21066633-21066705)
chr2 (2-77)||(11875120-11875195)
chr2 (7-77)||(36736690-36736760)
chr2 (6-77)||(19883037-19883108)
chr2 (110-160)||(40387037-40387087)
chr2 (119-159)||(17333892-17333932)
chr2 (97-149)||(19884407-19884459)
[»] chr1 (35 HSPs)
chr1 (2-77)||(6195916-6195991)
chr1 (2-77)||(20640294-20640369)
chr1 (3-77)||(15472471-15472545)
chr1 (3-77)||(39456363-39456437)
chr1 (2-77)||(6203767-6203842)
chr1 (2-77)||(22568799-22568874)
chr1 (3-74)||(51969159-51969230)
chr1 (3-77)||(2415337-2415411)
chr1 (3-77)||(16886810-16886884)
chr1 (3-77)||(22110649-22110723)
chr1 (3-77)||(22114498-22114572)
chr1 (3-77)||(22429307-22429381)
chr1 (3-77)||(22838089-22838163)
chr1 (6-77)||(1957230-1957301)
chr1 (6-77)||(1962924-1962995)
chr1 (6-77)||(14803380-14803451)
chr1 (6-77)||(14812254-14812325)
chr1 (2-77)||(25924706-25924781)
chr1 (3-77)||(5622325-5622399)
chr1 (3-77)||(5636464-5636538)
chr1 (3-77)||(13187722-13187796)
chr1 (3-77)||(20978051-20978125)
chr1 (97-159)||(51967950-51968012)
chr1 (1-77)||(26196963-26197039)
chr1 (6-77)||(14818858-14818929)
chr1 (97-159)||(15473850-15473912)
chr1 (3-74)||(28426770-28426841)
chr1 (3-77)||(20520191-20520265)
chr1 (6-72)||(44908813-44908879)
chr1 (3-77)||(45499020-45499094)
chr1 (14-77)||(47109776-47109839)
chr1 (12-74)||(47111191-47111253)
chr1 (2-36)||(18217051-18217085)
chr1 (3-77)||(20430760-20430834)
chr1 (116-160)||(44910963-44911007)
[»] scaffold2175 (1 HSPs)
scaffold2175 (3-77)||(587-661)
[»] scaffold0458 (1 HSPs)
scaffold0458 (3-77)||(7280-7354)
[»] scaffold0422 (1 HSPs)
scaffold0422 (3-77)||(4493-4567)
[»] scaffold0327 (1 HSPs)
scaffold0327 (3-77)||(2314-2388)
[»] chr4 (35 HSPs)
chr4 (3-77)||(16718797-16718871)
chr4 (3-77)||(14926952-14927026)
chr4 (3-77)||(15887546-15887620)
chr4 (3-77)||(20840788-20840862)
chr4 (3-77)||(25986559-25986633)
chr4 (3-77)||(44623910-44623984)
chr4 (97-160)||(8657547-8657610)
chr4 (2-77)||(13102258-13102333)
chr4 (2-77)||(18037682-18037757)
chr4 (2-77)||(18382065-18382140)
chr4 (2-77)||(41150847-41150922)
chr4 (3-77)||(3441453-3441527)
chr4 (3-77)||(9186263-9186337)
chr4 (3-77)||(12427750-12427824)
chr4 (3-74)||(9191683-9191754)
chr4 (2-77)||(55791871-55791946)
chr4 (3-77)||(18108-18182)
chr4 (3-77)||(3834656-3834730)
chr4 (3-77)||(16369266-16369340)
chr4 (3-77)||(18217542-18217616)
chr4 (3-77)||(22705391-22705465)
chr4 (3-77)||(22714362-22714436)
chr4 (4-77)||(7946082-7946154)
chr4 (3-64)||(39537239-39537300)
chr4 (2-77)||(15565909-15565984)
chr4 (2-77)||(15578556-15578631)
chr4 (2-77)||(22173617-22173692)
chr4 (3-77)||(14882942-14883016)
chr4 (3-77)||(14899662-14899736)
chr4 (16-77)||(7114025-7114086)
chr4 (1-77)||(14437867-14437942)
chr4 (4-73)||(3369610-3369679)
chr4 (10-55)||(18481919-18481964)
chr4 (3-40)||(40958389-40958426)
chr4 (3-40)||(40960000-40960037)
[»] scaffold0301 (1 HSPs)
scaffold0301 (98-159)||(8949-9010)
[»] scaffold0378 (2 HSPs)
scaffold0378 (2-77)||(2885-2960)
scaffold0378 (2-77)||(15365-15440)
[»] scaffold0064 (1 HSPs)
scaffold0064 (2-77)||(7347-7422)
[»] scaffold0050 (2 HSPs)
scaffold0050 (2-77)||(39007-39082)
scaffold0050 (3-83)||(20624-20704)
[»] scaffold0021 (1 HSPs)
scaffold0021 (3-74)||(116105-116176)
[»] scaffold0011 (1 HSPs)
scaffold0011 (2-77)||(200864-200939)
[»] scaffold1818 (1 HSPs)
scaffold1818 (3-77)||(894-968)
[»] scaffold1796 (1 HSPs)
scaffold1796 (3-77)||(1057-1131)
[»] scaffold0991 (1 HSPs)
scaffold0991 (3-77)||(3489-3563)
[»] scaffold0770 (1 HSPs)
scaffold0770 (3-77)||(2961-3035)
[»] scaffold0573 (1 HSPs)
scaffold0573 (3-77)||(1800-1874)
[»] scaffold0503 (1 HSPs)
scaffold0503 (3-77)||(4469-4543)
[»] scaffold0420 (1 HSPs)
scaffold0420 (3-77)||(12974-13048)
[»] scaffold0306 (1 HSPs)
scaffold0306 (3-77)||(17042-17116)
[»] scaffold0183 (1 HSPs)
scaffold0183 (3-77)||(29846-29920)
[»] scaffold0152 (1 HSPs)
scaffold0152 (3-77)||(15670-15744)
[»] scaffold0067 (1 HSPs)
scaffold0067 (3-77)||(42503-42577)
[»] scaffold0037 (1 HSPs)
scaffold0037 (3-77)||(76899-76973)
[»] scaffold0029 (3 HSPs)
scaffold0029 (3-77)||(101265-101339)
scaffold0029 (3-77)||(21953-22027)
scaffold0029 (3-77)||(35694-35768)
[»] scaffold0001 (1 HSPs)
scaffold0001 (3-77)||(12206-12280)
[»] scaffold0138 (2 HSPs)
scaffold0138 (4-77)||(6293-6366)
scaffold0138 (4-77)||(9562-9635)
[»] scaffold0362 (1 HSPs)
scaffold0362 (5-77)||(2685-2757)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-77)||(360815-360891)
scaffold0002 (2-77)||(298671-298746)
[»] scaffold1689 (1 HSPs)
scaffold1689 (2-77)||(1267-1342)
[»] scaffold0721 (1 HSPs)
scaffold0721 (2-77)||(1055-1130)
[»] scaffold0243 (1 HSPs)
scaffold0243 (6-77)||(22905-22976)
[»] scaffold0238 (1 HSPs)
scaffold0238 (2-77)||(26685-26760)
[»] scaffold0068 (2 HSPs)
scaffold0068 (2-77)||(15943-16018)
scaffold0068 (2-77)||(23862-23937)
[»] scaffold0034 (1 HSPs)
scaffold0034 (2-77)||(117373-117448)
[»] scaffold1494 (1 HSPs)
scaffold1494 (3-77)||(76-150)
[»] scaffold0643 (1 HSPs)
scaffold0643 (3-77)||(561-635)
[»] scaffold0535 (1 HSPs)
scaffold0535 (3-77)||(11019-11093)
[»] scaffold0320 (1 HSPs)
scaffold0320 (3-77)||(4955-5029)
[»] scaffold0114 (1 HSPs)
scaffold0114 (3-77)||(33086-33160)
[»] scaffold0104 (1 HSPs)
scaffold0104 (3-77)||(11457-11531)
[»] scaffold0094 (1 HSPs)
scaffold0094 (3-77)||(22538-22612)
[»] scaffold0081 (1 HSPs)
scaffold0081 (3-77)||(54924-54998)
[»] scaffold0049 (1 HSPs)
scaffold0049 (3-77)||(21480-21554)
[»] scaffold0048 (1 HSPs)
scaffold0048 (3-77)||(3240-3314)
[»] scaffold0043 (2 HSPs)
scaffold0043 (3-77)||(91705-91779)
scaffold0043 (97-157)||(33213-33273)
[»] scaffold0039 (1 HSPs)
scaffold0039 (3-77)||(88462-88536)
[»] scaffold0014 (1 HSPs)
scaffold0014 (3-77)||(5703-5777)
[»] scaffold1623 (1 HSPs)
scaffold1623 (2-77)||(279-354)
[»] scaffold0799 (1 HSPs)
scaffold0799 (2-77)||(5454-5529)
[»] scaffold0755 (1 HSPs)
scaffold0755 (2-77)||(2724-2799)
[»] scaffold0236 (1 HSPs)
scaffold0236 (2-61)||(26899-26958)
[»] scaffold0202 (1 HSPs)
scaffold0202 (6-77)||(25705-25776)
[»] scaffold0016 (1 HSPs)
scaffold0016 (3-74)||(15500-15571)
[»] scaffold0007 (1 HSPs)
scaffold0007 (2-77)||(118-193)
[»] scaffold1699 (1 HSPs)
scaffold1699 (97-159)||(1368-1430)
[»] scaffold0431 (1 HSPs)
scaffold0431 (3-77)||(858-932)
[»] scaffold0182 (1 HSPs)
scaffold0182 (3-77)||(7234-7308)
[»] scaffold0132 (1 HSPs)
scaffold0132 (3-77)||(30271-30345)
[»] scaffold0075 (1 HSPs)
scaffold0075 (3-77)||(57806-57880)
[»] scaffold0031 (1 HSPs)
scaffold0031 (3-77)||(32357-32431)
[»] scaffold1473 (1 HSPs)
scaffold1473 (3-72)||(1102-1171)
[»] scaffold0119 (1 HSPs)
scaffold0119 (98-159)||(40175-40236)
[»] scaffold0351 (1 HSPs)
scaffold0351 (2-77)||(1236-1311)
[»] scaffold0540 (1 HSPs)
scaffold0540 (3-77)||(956-1030)
[»] scaffold0473 (2 HSPs)
scaffold0473 (3-77)||(936-1010)
scaffold0473 (3-77)||(7062-7136)
[»] scaffold0167 (1 HSPs)
scaffold0167 (11-77)||(417-483)
[»] scaffold0092 (1 HSPs)
scaffold0092 (3-77)||(15247-15320)
[»] scaffold0066 (1 HSPs)
scaffold0066 (3-64)||(42718-42779)
[»] scaffold0085 (1 HSPs)
scaffold0085 (1-77)||(17334-17410)
[»] scaffold0101 (1 HSPs)
scaffold0101 (6-77)||(14758-14828)
[»] scaffold0065 (1 HSPs)
scaffold0065 (3-74)||(39834-39905)
[»] scaffold0269 (1 HSPs)
scaffold0269 (19-77)||(12622-12680)
[»] scaffold0465 (1 HSPs)
scaffold0465 (3-40)||(4998-5035)
[»] scaffold0551 (1 HSPs)
scaffold0551 (3-40)||(6019-6056)


Alignment Details
Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 25675758 - 25675834
Alignment:
Q  1 cattgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  25675758 cattgaaaagattttgggttcgggggttagttacataaagagaaggtattagcaccctttatgttcgtagtactcta 25675834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 25534353 - 25534277
Alignment:
Q  1 cattgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| |||||||| ||||||||||||    
T  25534353 cattgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtctgtagtactcta 25534277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 20084654 - 20084728
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  20084654 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 20084728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 20098256 - 20098330
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  20098256 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 20098330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 22957757 - 22957831
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  22957757 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 22957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 25827458 - 25827384
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||| ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  25827458 ttgaaaagatttagggttcgagggttagttacataaagggaaggtattagcaccctttatgtttgtagtactcta 25827384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 1206889 - 1206832
Alignment:
Q  160 gccagcaaaccctatttttctcagcaaagtaacaacttctcatctctacctttctctc 217  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1206889 gccagcaaaccctatttttctcagcagagtaacaacttctcatctctacctttctctc 1206832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 25527669 - 25527593
Alignment:
Q  1 cattgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  25527669 cattgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 25527593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 21727120 - 21727195
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  21727120 attgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 21727195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 26185230 - 26185305
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||  |||||||  |||||||||||    
T  26185230 attgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccatttatgtccgtagtactcta 26185305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 23689577 - 23689651
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| ||||||||||  ||||||| ||||||||||||    
T  23689577 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccttttatgtctgtagtactcta 23689651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 11937813 - 11937888
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| ||  |||||||||||    
T  11937813 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttacgtccgtagtactcta 11937888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 11951737 - 11951812
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| ||  |||||||||||    
T  11951737 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttacgtccgtagtactcta 11951812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 15777801 - 15777876
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| ||  |||||||||||    
T  15777801 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttacgtccgtagtactcta 15777876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 15792036 - 15792111
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| ||  |||||||||||    
T  15792036 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttacgtccgtagtactcta 15792111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 21690048 - 21689973
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| ||  |||||||||||    
T  21690048 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttacgtccgtagtactcta 21689973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 21697967 - 21697892
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| ||  |||||||||||    
T  21697967 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttacgtccgtagtactcta 21697892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 34312440 - 34312515
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  34312440 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 34312515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 1807354 - 1807280
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  1807354 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 1807280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 5433708 - 5433782
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  5433708 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 5433782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 5447524 - 5447598
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  5447524 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 5447598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 7253300 - 7253374
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| | ||||||  |||||||||||    
T  7253300 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccccttatgtccgtagtactcta 7253374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 7260743 - 7260817
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| | ||||||  |||||||||||    
T  7260743 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccccttatgtccgtagtactcta 7260817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 12385521 - 12385595
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  12385521 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 12385595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 12394214 - 12394288
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  12394214 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 12394288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 15955609 - 15955683
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||| ||||||||| ||||||| ||| |||||||||| ||||||||  |||||||||||    
T  15955609 ttgaaaagattttgggttcgagggttagttccataaagggaaggtattagcaccctttatgtccgtagtactcta 15955683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 17949938 - 17949864
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  17949938 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 17949864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 17963827 - 17963753
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  17963827 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 17963753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 21826113 - 21826187
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  21826113 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 21826187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 23575413 - 23575487
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  23575413 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 23575487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 25040860 - 25040934
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||  ||||||||  |||||||||||    
T  25040860 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcatcctttatgtccgtagtactcta 25040934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 25448534 - 25448608
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||  | ||||||  |||||||||||    
T  25448534 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcagcccttatgtccgtagtactcta 25448608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 26546502 - 26546576
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||  ||||||||  |||||||||||    
T  26546502 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcatcctttatgtccgtagtactcta 26546576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 31513149 - 31513075
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  31513149 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 31513075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 31527274 - 31527200
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  31527274 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 31527200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 23376894 - 23376965
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtact 74  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  ||||||||    
T  23376894 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtact 23376965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 1799621 - 1799547
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||| ||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  1799621 ttgaaaagatttagggttcgtgggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 1799547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 7788302 - 7788228
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  | |||||||||    
T  7788302 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgcagtactcta 7788228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 7796152 - 7796078
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  | |||||||||    
T  7796152 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgcagtactcta 7796078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 18957287 - 18957213
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || ||| | | ||||||||||    
T  18957287 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctatatttctatagtactcta 18957213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 21829271 - 21829345
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||| |||||| ||||||||||||||||||||||||| ||| |||||||||| | ||||||  |||||||||||    
T  21829271 ttgaagagatttagggttcgggggttagttacataaagggaaggtattagcaccccttatgtccgtagtactcta 21829345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 22706003 - 22705929
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||| | ||||| ||||||| ||||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  22706003 ttgaaaagatctagggtttgggggttggttacataaagggaaggtattagcaccctttatgttcgtagtactcta 22705929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 13358486 - 13358439
Alignment:
Q  110 tcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatga 157  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||    
T  13358486 tcagagggtgtatgaatgtagggtcttaggtcaaaaattgggatatga 13358439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 23766330 - 23766255
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| |||||||| |||||||||||||||| ||| || ||| ||| ||||||||  |||||||||||    
T  23766330 attgaaaagatttagggttcggaggttagttacataaagggaaggtgttaacaccctttatgtccgtagtactcta 23766255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 23816178 - 23816103
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| |||||||| |||||||||||||||| ||| || ||| ||| ||||||||  |||||||||||    
T  23816178 attgaaaagatttagggttcggaggttagttacataaagggaaggtgttaacaccctttatgtccgtagtactcta 23816103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 36369389 - 36369464
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| || ||||||| ||||||||   ||||||||||    
T  36369389 attgaaaagatttagggttcgggggttagttacacaaagggaaggtgttagcaccctttatgtccatagtactcta 36369464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 36383317 - 36383392
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| || ||||||| ||||||||   ||||||||||    
T  36383317 attgaaaagatttagggttcgggggttagttacacaaagggaaggtgttagcaccctttatgtccatagtactcta 36383392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 36994051 - 36994126
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| || ||||||| ||||||||   ||||||||||    
T  36994051 attgaaaagatttagggttcgggggttagttacacaaagggaaggtgttagcaccctttatgtccatagtactcta 36994126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 37007989 - 37008064
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| || ||||||| ||||||||   ||||||||||    
T  37007989 attgaaaagatttagggttcgggggttagttacacaaagggaaggtgttagcaccctttatgtccatagtactcta 37008064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 26870516 - 26870442
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| | | ||||  |||||||||||    
T  26870516 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcacccgtcatgtccgtagtactcta 26870442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 30249408 - 30249354
Alignment:
Q  97 agaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattggg 151  Q
    ||||||||||| |||||| ||||||||||||||||||| || |||||||||||||    
T  30249408 agaatattctgagtcagacggtgtatgaatgtaggttcctaggtcaaaaattggg 30249354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 40183261 - 40183203
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgt 64  Q
    ||||||||| ||||||||||||||||||||||||| ||| ||||||||||  |||||||    
T  40183261 aaaagatttagggttcgggggttagttacataaagggaaagtattagcacattttatgt 40183203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 33304421 - 33304347
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| |||||| ||| |||||||||||||  |||  ||||||||| ||||| || ||||||||||||    
T  33304421 ttgaaaagatttagggttcagggattagttacataaatggaagatattagcaccctttacgtctgtagtactcta 33304347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 21806860 - 21806897
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaag 40  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  21806860 attgaaaagattttgggttc-ggggttagttacataaag 21806897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 34862 - 34936
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  34862 ttgaaaagattttgggttctggggttagttacataaagggaatgtattagcaccctttatgtctgtagtactcta 34936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 20394 - 20470
Alignment:
Q  1 cattgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||| ||||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  20394 cattgaaaagattttgggttcgggggttggttacataaagggaaggtattagcaccctttatgttcgtagtactcta 20470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12137 - 12214
Alignment:
Q  1 cattgaaaagattttgggttcggggg-ttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||| || |||| |||||| ||| |||||||||| ||||||||| |||||||||||    
T  12137 cattgaaaagattttgggttcggggggttggttagataaagggaaggtattagcaccctttatgttcgtagtactcta 12214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 6e-24; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 23640350 - 23640426
Alignment:
Q  1 cattgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||| ||||||||||||    
T  23640350 cattgaaaagattttgggttcgggggttagttccataaagggaatgtattggcaccctttatgtctgtagtactcta 23640426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 39639165 - 39639239
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  39639165 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgttcgtagtactcta 39639239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 23899482 - 23899407
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  23899482 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 23899407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 21473384 - 21473458
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||||||    
T  21473384 ttgaaaagattttgggttcgggggttagttgcataaagggaaggtattagcaccctttatgtccgtagtactcta 21473458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 23814650 - 23814724
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactct 76  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||  ||||||||||    
T  23814650 attgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactct 23814724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 32024229 - 32024303
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  32024229 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 32024303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 30679424 - 30679500
Alignment:
Q  1 cattgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||  ||||||| ||||||||||||    
T  30679424 cattaaaaagattttgggttcgggggttagttacataaagagaaggtattaacaccatttatgtatgtagtactcta 30679500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 24483506 - 24483577
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  24483506 aaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 24483577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 23266136 - 23266210
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  23266136 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 23266210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 27324288 - 27324215
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| |||| ||| ||||||||||||    
T  27324288 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcacccttt-tgtgtgtagtactcta 27324215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 27806504 - 27806578
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||| |||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  27806504 ttgaagagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 27806578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 39629615 - 39629689
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  39629615 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 39629689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 15448222 - 15448297
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| |||||||||||||||||||| |||  ||| |||||||||| ||||||||  |||||||||||    
T  15448222 attgaaaagatttagggttcgggggttagttacacaaaaggaaggtattagcaccctttatgtccgtagtactcta 15448297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 15709047 - 15708973
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| |||||||||| |||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  15709047 attgaaaagatttagggttcgggg-ttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 15708973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 6032676 - 6032602
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||| ||||||||||||||| ||| || |||||||  |||||||  |||||||||||    
T  6032676 ttgaaaagatttagggttcgggagttagttacataaagggaaggtgttagcaccatttatgtccgtagtactcta 6032602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 15059372 - 15059446
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| |||||| |||||||||| || |||| ||| |||||||||| ||||||||  |||||||||||    
T  15059372 attgaaaagatttagggttcaggggttagttcca-aaagggaaggtattagcaccctttatgtccgtagtactcta 15059446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0435 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 6391 - 6466
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||| |||||||||||    
T  6391 attgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgttcgtagtactcta 6466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 980 - 1055
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||| ||| |||||||    
T  980 attgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccctttatgttcgtattactcta 1055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 15764783 - 15764858
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  15764783 attgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 15764858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 20029359 - 20029285
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||| ||||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  20029359 ttgaaaagattttgggttcgggggttggttacataaagggaaggtattagcaccctttatgttcgtagtactcta 20029285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 20541524 - 20541598
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||  |||||||||||    
T  20541524 ttgaaaagattttgggttcgggggttagttacataaagggaatgtattatcaccctttatgtccgtagtactcta 20541598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 43004275 - 43004351
Alignment:
Q  1 cattgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||| |||||||||||||||||||||||| |||  ||||||||| |||||||||||||||| ||||    
T  43004275 cattgaaaagattttcggttcgggggttagttacataaagggaaaatattagcaccctttatgtttgtagtattcta 43004351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 46460710 - 46460786
Alignment:
Q  1 cattgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||| |||||||||| |||||||| ||||||||||||    
T  46460710 cattgaaaagaatttgggttcgggggttagttacaaaaagggaaggtattagcaccctttatgtctgtagtactcta 46460786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 18155952 - 18156027
Alignment:
Q  1 cattgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactct 76  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||| |||| | ||||||| ||||||||||    
T  18155952 cattgaaaagattttgggttcgggggttagttacataaagggaaggtatttgcaccccttatgttcgtagtactct 18156027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 30363191 - 30363266
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| |||||||||| ||||||||| |||||||||||    
T  30363191 attgaaaagatttagggttcgggggttagttacacaaagggaaggtattagcaccctttatgttcgtagtactcta 30363266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 30377256 - 30377331
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| |||||||||| ||||||||| |||||||||||    
T  30377256 attgaaaagatttagggttcgggggttagttacacaaagggaaggtattagcaccctttatgttcgtagtactcta 30377331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 4891492 - 4891566
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| |||||||||||||||||||| |||| |||||||||||||| ||||||||  |||||||||||    
T  4891492 ttgaaaagatttagggttcgggggttagttacaaaaagggaatgtattagcaccctttatgtccgtagtactcta 4891566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 5647156 - 5647230
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  5647156 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 5647230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 8955509 - 8955435
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  8955509 ttgaaaagatttagggttcgggggttagttacataaagagaaggtattagcaccctttatgtccgtagtactcta 8955435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 42015747 - 42015821
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  42015747 ttgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 42015821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 44413284 - 44413346
Alignment:
Q  97 agaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgaca 159  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  44413284 agaatattatgggtcagagggtgtatgaatgtaggttcttaggtcaaaaattggggtatgaca 44413346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 43005639 - 43005703
Alignment:
Q  96 aagaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgacag 160  Q
    ||||||||| |||||||||||||||||||||||||||||||| || |||||||||| ||||||||    
T  43005639 aagaatattttgggtcagagggtgtatgaatgtaggttcttaggtaaaaaattggggtatgacag 43005703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 4854463 - 4854388
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| |||||||||| ||||||||  |||||||||||    
T  4854463 attgaaaagatttagggttcgggggttagttacaaaaagggaaggtattagcaccctttatgtccgtagtactcta 4854388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 18157299 - 18157362
Alignment:
Q  97 agaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgacag 160  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||| |||| ||||||||    
T  18157299 agaatattatgggtcagagggtgtatgaatgtaggttcttaggtcaaaaactggggtatgacag 18157362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 42629415 - 42629486
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  42629415 aaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 42629486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 6850638 - 6850712
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||| |||||||||||||||| ||| ||||||||||  |||||||  |||||||||||    
T  6850638 ttgaaaagattttgggttcggaggttagttacataaagggaaggtattagcaccttttatgtccgtagtactcta 6850712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 8811915 - 8811841
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  8811915 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 8811841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 8819730 - 8819656
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  8819730 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 8819656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 8911216 - 8911290
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||   ||||||||||    
T  8911216 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccatagtactcta 8911290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 9462416 - 9462342
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  9462416 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 9462342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 9476174 - 9476100
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  9476174 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 9476100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 16386647 - 16386721
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  16386647 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 16386721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 16400774 - 16400848
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  16400774 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 16400848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 19096133 - 19096207
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||  ||| |||||||||| ||||||||  |||||||||||    
T  19096133 ttgaaaagatttagggttcgggggttagttacataaaaggaaggtattagcaccctttatgtccgtagtactcta 19096207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 19242426 - 19242500
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  19242426 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 19242500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 23876727 - 23876801
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  23876727 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 23876801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 23885583 - 23885657
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  23885583 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 23885657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 28416600 - 28416526
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||||||    
T  28416600 ttgaaaagatttagggttcgggggttagttccataaagggaaggtattagcaccctttatgtccgtagtactcta 28416526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 35091613 - 35091539
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||||||||||||  |||||||  |||||||||||    
T  35091613 ttgaaaagatttagggttcgggggttggttacataaagggaatgtattagcaccatttatgtccgtagtactcta 35091539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 36900516 - 36900442
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| |||||||||||||||||||||||||  || |||||||||| ||||||||  |||||||||||    
T  36900516 ttgaaaagatttagggttcgggggttagttacataaaggaaaggtattagcaccctttatgtccgtagtactcta 36900442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 17014083 - 17014144
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgt 64  Q
    |||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||    
T  17014083 ttgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgt 17014144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 839646 - 839572
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||  ||| || ||||||| ||||||||  |||||||||||    
T  839646 ttgaaaagatttagggttcgggggttagttacataaaaggaaggtgttagcaccctttatgtccgtagtactcta 839572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 1204826 - 1204752
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||  ||| || ||||||| ||||||||  |||||||||||    
T  1204826 ttgaaaagatttagggttcgggggttagttacataaaaggaaggtgttagcaccctttatgtccgtagtactcta 1204752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 34131398 - 34131472
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || || |||| ||||||||  |||||||||||    
T  34131398 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttcgcaccctttatgtccgtagtactcta 34131472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 46298764 - 46298834
Alignment:
Q  7 aaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||| ||||||||||||| ||||||||||| ||| |||||| ||| ||||||||| |||||||||||    
T  46298764 aaagatttagggttcgggggttggttacataaagggaaggtattaacaccctttatgttcgtagtactcta 46298834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 3083103 - 3083032
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||| ||||||||||||||||||||||||| | |  ||||||||| ||||||||  |||||||||||    
T  3083103 aaaagatttagggttcgggggttagttacataaagggtagatattagcaccctttatgtccgtagtactcta 3083032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 5765627 - 5765552
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| || ||||||| ||||||||   ||||||||||    
T  5765627 attgaaaagatttagggttcgggggttagttacacaaagggaaggtgttagcaccctttatgtccatagtactcta 5765552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 12979950 - 12979879
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtact 74  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||| ||||| | ||||||  ||||||||    
T  12979950 ttgaaaagatttagggttcgggggttagttacataaagggaaggtataagcaccccttatgtccgtagtact 12979879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 34137692 - 34137765
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| |||||||||||||| |||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  34137692 ttgaaaagatttagggttcgggggtta-ttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 34137765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 355905 - 355850
Alignment:
Q  22 gggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||| ||||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  355905 gggggttggttacataaagggaaggtattagcaccctttatgttcgtagtactcta 355850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 15685689 - 15685650
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtg 42  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  15685689 ttgaaaagatttagggttcgggggttagttacataaagtg 15685650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 3334744 - 3334818
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||| |  |||||||||||||||||  ||| |||||||||| ||||||||  |||||||||||    
T  3334744 ttgaaaagatttaggggttaggggttagttacataaatggaaggtattagcaccctttatgtccgtagtactcta 3334818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 46462067 - 46462129
Alignment:
Q  97 agaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgaca 159  Q
    |||||||| | ||||| ||||||||||||| |||||||||| || |||||||||| |||||||    
T  46462067 agaatattataggtcaaagggtgtatgaatctaggttcttaggtaaaaaattggggtatgaca 46462129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 34359895 - 34359944
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtatta 51  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||| |||||    
T  34359895 attgaaaagatttagggttcgagggttagttacataaagggaatatatta 34359944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 846818 - 846747
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||| |||||||| |||||||||||||||  ||| || || |||| ||||||||  |||||||||||    
T  846818 aaaagatttagggttcggaggttagttacataaaaggaaggtgttggcaccctttatgtccgtagtactcta 846747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 854193 - 854122
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||| |||||||| |||||||||||||||  ||| || || |||| ||||||||  |||||||||||    
T  854193 aaaagatttagggttcggaggttagttacataaaaggaaggtgttggcaccctttatgtccgtagtactcta 854122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 1212197 - 1212126
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||| |||||||| |||||||||||||||  ||| || || |||| ||||||||  |||||||||||    
T  1212197 aaaagatttagggttcggaggttagttacataaaaggaaggtgttggcaccctttatgtccgtagtactcta 1212126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 23443651 - 23443600
Alignment:
Q  108 ggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgaca 159  Q
    ||||| |||| ||||||||||||| ||||| ||||||||||||| |||||||    
T  23443651 ggtcaaagggcgtatgaatgtagggtcttaggtcaaaaattggggtatgaca 23443600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 16271367 - 16271441
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||| |||| ||  || ||| |||||||||||||  || || |||||||||||    
T  16271367 ttgaaaagatttagggttcgggggttggttatatttagggaaggtattagcactctaaatattcgtagtactcta 16271441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 35077090 - 35077016
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| |||||||||  || |||||||| || ||| |||||| ||| ||||||||  |||||||||||    
T  35077090 ttgaaaagatttagggttcgggaattggttacatatagggaaggtattaacaccctttatgtccgtagtactcta 35077016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 1551592 - 1551517
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  1551592 attgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 1551517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 24141598 - 24141673
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  24141598 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgttcgtagtactcta 24141673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 24148088 - 24148163
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  24148088 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgttcgtagtactcta 24148163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 20049054 - 20049128
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  20049054 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 20049128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 20056915 - 20056989
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  20056915 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 20056989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 159
Target Start/End: Complemental strand, 18909188 - 18909125
Alignment:
Q  96 aagaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgaca 159  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  18909188 aagaatattttgggtcagagggtgtatgaatgtaggttcttaggtcaaaaattggggtatgaca 18909125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 25505106 - 25505181
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  25505106 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 25505181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 614036 - 614110
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| | ||||||  |||||||||||    
T  614036 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccccttatgtccgtagtactcta 614110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 621956 - 622030
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| | ||||||  |||||||||||    
T  621956 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccccttatgtccgtagtactcta 622030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 9129891 - 9129965
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  9129891 ttgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 9129965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 9143727 - 9143801
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  9143727 ttgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 9143801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 15664325 - 15664399
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| ||||||||  |||||||||||    
T  15664325 ttgaaaagattttgggttcgggggttagttacacaaagggaaggtattagcaccctttatgtccgtagtactcta 15664399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 21963526 - 21963452
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  21963526 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 21963452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 26897952 - 26897878
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| | ||||||  |||||||||||    
T  26897952 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccccttatgtccgtagtactcta 26897878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 27511439 - 27511365
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  27511439 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 27511365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 27519382 - 27519308
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  27519382 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 27519308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 30435348 - 30435422
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  30435348 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 30435422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 22232579 - 22232643
Alignment:
Q  97 agaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgacagc 161  Q
    |||||||| |||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  22232579 agaatattatgggtcagagggtgtatgaatgtaggttcttaggttaaaaattggggtatgacagc 22232643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 25493033 - 25493108
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| |||||||||||||||||| |||||| ||| |||||||||| ||||||||  |||||||||||    
T  25493033 attgaaaagatttagggttcgggggttagttaaataaagggaaggtattagcaccctttatgtccgtagtactcta 25493108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 8277473 - 8277399
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  8277473 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 8277399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 8285352 - 8285278
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  8285352 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 8285278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 14073150 - 14073224
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||||  || ||||||||    
T  14073150 ttgaaaagatttagggctcgggggttagttacataaagggaatgtattagcaccctttatgtccgtggtactcta 14073224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 16323704 - 16323778
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  16323704 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 16323778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 16815049 - 16815123
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  16815049 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 16815123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 16823804 - 16823878
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  16823804 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 16823878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 18091243 - 18091169
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||| |||| ||||||||||||||||||| ||||| ||| |||||||||| |||||||| ||||||||||||    
T  18091243 ttgaaaatatttagggttcgggggttagttacgtaaagggaaggtattagcaccctttatgtctgtagtactcta 18091169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 18910567 - 18910493
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||| ||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  18910567 ttgaaaagatttagggttcgggggttggttacataaagggaaggtattagcaccctttatgtccgtagtactcta 18910493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 20038849 - 20038923
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  20038849 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 20038923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 20046656 - 20046730
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  20046656 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 20046730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 22074054 - 22073980
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  22074054 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 22073980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 22325359 - 22325285
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||| ||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  22325359 ttgaaaagatttagggttcgagggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 22325285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 26980482 - 26980556
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||||||    
T  26980482 ttgaaaagatttcgggttcgggggttagttccataaagggaaggtattagcaccctttatgtccgtagtactcta 26980556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 27072872 - 27072946
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||||||    
T  27072872 ttgaaaagatttcgggttcgggggttagttccataaagggaaggtattagcaccctttatgtccgtagtactcta 27072946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 22331107 - 22331038
Alignment:
Q  8 aagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  22331107 aagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 22331038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 20451221 - 20451289
Alignment:
Q  9 agattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  20451221 agatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 20451289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 20458040 - 20458108
Alignment:
Q  9 agattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  20458040 agatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 20458108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 3917570 - 3917632
Alignment:
Q  97 agaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgaca 159  Q
    |||||||| ||||| |||||||||||||||||||||||||| || |||||||||| |||||||    
T  3917570 agaatattatgggttagagggtgtatgaatgtaggttcttaggttaaaaattggggtatgaca 3917632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 10983619 - 10983693
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| |||  | ||||||| ||||||||  |||||||||||    
T  10983619 ttgaaaagatttagggttcgggggttagttacataaagggaagtttttagcaccctttatgtccgtagtactcta 10983693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 18386836 - 18386910
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||  ||| |||||||||| ||||||||  || ||||||||    
T  18386836 ttgaaaagatttagggttcgggggttagttacataaaaggaaggtattagcaccctttatgtccgtcgtactcta 18386910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 3916170 - 3916241
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||| |||||||||||||| |||||||||  ||| |||||||||| ||||||||  |||||||||||    
T  3916170 aaaagatttagggttcgggggttaattacataaaaggaaggtattagcaccctttatgtccgtagtactcta 3916241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 18963515 - 18963589
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||| ||||||||||||||  ||| || ||||||| ||||||||  |||||||||||    
T  18963515 ttgaaaagatttagggttcgggagttagttacataaaaggaaggtgttagcaccctttatgtccgtagtactcta 18963589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 19171114 - 19171042
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| |||||||||| |||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  19171114 ttgaaaagatttagggttcgggg-ttagttacataaagggaaggtattagcac-ctttatgtccgtagtactcta 19171042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 18396129 - 18396072
Alignment:
Q  7 aaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgt 64  Q
    |||||||| |||||| |||||||||||||| ||| ||| |||||||||| ||||||||    
T  18396129 aaagatttagggttcaggggttagttacatcaagggaaggtattagcaccctttatgt 18396072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 14779974 - 14780019
Alignment:
Q  114 agggtgtatgaatgtaggttcttaagtcaaaaattgggatatgaca 159  Q
    ||||||||||||||||||| |||| ||||||||||||  |||||||    
T  14779974 agggtgtatgaatgtaggtccttaggtcaaaaattggtgtatgaca 14780019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 14777540 - 14777592
Alignment:
Q  22 gggggttagttacataaagtgaatgtattagcactctttatgtttgtagtact 74  Q
    ||||||||||||||||||| ||| |||||| |||  |||||||| ||||||||    
T  14777540 gggggttagttacataaagggaaggtattatcaccatttatgttcgtagtact 14777592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 22231186 - 22231254
Alignment:
Q  9 agattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||| ||||||||||||||| ||||||||| ||| ||  |||||| |||||| || |||||| ||||    
T  22231186 agatttagggttcgggggttagatacataaagggaaggtgatagcaccctttatattcgtagtattcta 22231254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 8617941 - 8617866
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  8617941 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgttcgtagtactcta 8617866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 11182910 - 11182836
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  11182910 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 11182836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 8625813 - 8625738
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| |||||||||| |||||||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  8625813 attgaaaagatttagggttcggggtttagttacataaagggaaggtattagcaccctttatgttcgtagtactcta 8625738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 9553648 - 9553723
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  9553648 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 9553723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 11628022 - 11628097
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  11628022 attgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 11628097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 15911387 - 15911312
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  15911387 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 15911312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 15925630 - 15925555
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  15925630 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 15925555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 18694375 - 18694300
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  18694375 attgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 18694300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 21609248 - 21609173
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||||||  |||||||||||    
T  21609248 attgaaaagattttgggttcgggggttagttacataaagggaaggtactagcaccctttatgtccgtagtactcta 21609173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 21617876 - 21617801
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||||||  |||||||||||    
T  21617876 attgaaaagattttgggttcgggggttagttacataaagggaaggtactagcaccctttatgtccgtagtactcta 21617801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 33814317 - 33814392
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||||||  |||||||||||    
T  33814317 attgaaaagattttgggttcgggggttagttacataaagggaaggtactagcaccctttatgtccgtagtactcta 33814392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 35491118 - 35491055
Alignment:
Q  97 agaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgacag 160  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  35491118 agaatattctaggtcagagggtgtatgaatgtaggttcttaggtcaaaaattggggtatgacag 35491055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 48059308 - 48059383
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| || ||||||| |||||||| ||||||||||||    
T  48059308 attgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtctgtagtactcta 48059383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 12559324 - 12559250
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||| |  |||||||||||    
T  12559324 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccctttatttccgtagtactcta 12559250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 18709749 - 18709675
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| |||||||| |||||||||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  18709749 ttgaaaagatttagggttcggaggttagttacataaagggaaggtattagcaccctttatgttcgtagtactcta 18709675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 19835402 - 19835328
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  19835402 ttgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 19835328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 46391550 - 46391624
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| | ||||||  |||||||||||    
T  46391550 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccccttatgtccgtagtactcta 46391624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 46399298 - 46399372
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| | ||||||  |||||||||||    
T  46399298 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccccttatgtccgtagtactcta 46399372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 2227153 - 2227082
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||| ||||||||||||| ||||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  2227153 aaaagatttagggttcgggggttggttacataaagagaaggtattagcaccctttatgttcgtagtactcta 2227082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 8805802 - 8805727
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| ||  |||||||||||    
T  8805802 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttacgtccgtagtactcta 8805727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 8814202 - 8814127
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| ||  |||||||||||    
T  8814202 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttacgtccgtagtactcta 8814127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 9523933 - 9524008
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  9523933 attgaaaagatttagggtttgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 9524008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 12470975 - 12471050
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| |||||||||||||||||||||||||  || |||||||||| ||||||||  |||||||||||    
T  12470975 attgaaaagatttagggttcgggggttagttacataaaggaaaggtattagcaccctttatgtccgtagtactcta 12471050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 37254253 - 37254328
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| ||  |||||||||||    
T  37254253 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttacgtccgtagtactcta 37254328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 37264093 - 37264168
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| ||  |||||||||||    
T  37264093 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttacgtccgtagtactcta 37264168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 5649769 - 5649843
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  5649769 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtacgtagtactcta 5649843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 5944131 - 5944205
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  5944131 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 5944205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 5958243 - 5958317
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  5958243 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 5958317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 6195867 - 6195793
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  6195867 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 6195793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 6203451 - 6203377
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  6203451 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 6203377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 8607646 - 8607572
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  8607646 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 8607572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 8614109 - 8614035
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  8614109 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 8614035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 12556523 - 12556450
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  12556523 ttgaaaagattttgggttcgggg-ttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 12556450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 14322825 - 14322751
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||| ||||||||||||||||||| ||| || ||||||| |||||||| ||||||||||||    
T  14322825 ttgaaaagatttagggtttgggggttagttacataaagggaaggttttagcaccctttatgtctgtagtactcta 14322751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 15527139 - 15527213
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  15527139 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 15527213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 15535828 - 15535902
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  15535828 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 15535902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 15577325 - 15577399
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| |||||||||||| |||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  15577325 ttgaaaagatttagggttcgggggtcagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 15577399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 16029931 - 16030005
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||| |||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  16029931 ttgaaaatatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 16030005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 49965213 - 49965287
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||| ||||| ||||||||  |||||||||||    
T  49965213 ttgaaaagatttagggttcgggggttagttacataaagggaaggtatcagcaccctttatgtccgtagtactcta 49965287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 2253302 - 2253373
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||| ||||    
T  2253302 aaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtaatcta 2253373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 15621925 - 15621850
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  | |||||||||    
T  15621925 attgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgaagtactcta 15621850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 15629275 - 15629200
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  | |||||||||    
T  15629275 attgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgaagtactcta 15629200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 29125 - 29195
Alignment:
Q  7 aaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||| |||||||||||||| |||||||||  ||| |||||||||| |||||||| ||||||||||||    
T  29125 aaagatttagggttcgggggttaattacataaaaggaaggtattagcaccctttatgtctgtagtactcta 29195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 15608349 - 15608423
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| |||||||||||| |||||||||||| ||| |||||||||| |||||| |  |||||||||||    
T  15608349 ttgaaaagatttagggttcgggggtcagttacataaagggaaggtattagcaccctttatatccgtagtactcta 15608423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 20602144 - 20602218
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  | |||||||||    
T  20602144 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgcagtactcta 20602218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 39873580 - 39873654
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||  ||| ||||||||||  |||||||  |||||||||||    
T  39873580 ttgaaaagatttagggttcgggggttagttacataaaaggaaggtattagcaccatttatgtccgtagtactcta 39873654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 46373123 - 46373049
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||  ||| || ||||||| ||||||||  |||||||||||    
T  46373123 ttgaaaagatttagggttcgggggttagttacataaaaggaaggtgttagcaccctttatgtccgtagtactcta 46373049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 46387250 - 46387176
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||  ||| || ||||||| ||||||||  |||||||||||    
T  46387250 ttgaaaagatttagggttcgggggttagttacataaaaggaaggtgttagcaccctttatgtccgtagtactcta 46387176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 18693062 - 18693001
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgt 64  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||    
T  18693062 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgt 18693001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 18708432 - 18708371
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgt 64  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||    
T  18708432 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgt 18708371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 4312193 - 4312264
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||| ||||||||||||| ||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  4312193 aaaagatttagggttcgggggttggttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 4312264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 33573337 - 33573262
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||| ||||||||||| ||| || ||||||| ||||||||  ||| |||||||    
T  33573337 attgaaaagatttagggttcgggggttggttacataaagggaaggtgttagcaccctttatgtccgtattactcta 33573262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 52504774 - 52504700
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||| ||| || |||||  | |||||||||    
T  52504774 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattaacaccctctatgtccgcagtactcta 52504700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 22238278 - 22238217
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgt 64  Q
    |||||||||||| ||||||| ||||||||||||||||| || |||||||||||  |||||||    
T  22238278 ttgaaaagatttagggttcgagggttagttacataaagggagtgtattagcaccttttatgt 22238217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 23280838 - 23280906
Alignment:
Q  9 agattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||| ||||||||||||||||||||||||| ||| || ||||||| ||| ||||  |||||||||||    
T  23280838 agatttagggttcgggggttagttacataaagggaaggtgttagcacccttaatgtccgtagtactcta 23280906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 23286737 - 23286805
Alignment:
Q  9 agattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||| ||||||||||||||||||||||||| ||| || ||||||| ||| ||||  |||||||||||    
T  23286737 agatttagggttcgggggttagttacataaagggaaggtgttagcacccttaatgtccgtagtactcta 23286805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 24608802 - 24608860
Alignment:
Q  7 aaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtt 65  Q
    |||||||| ||||||||||||||||| ||||||| |||| |||||||||  ||||||||    
T  24608802 aaagatttagggttcgggggttagttgcataaagggaatatattagcaccatttatgtt 24608860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 14879825 - 14879857
Alignment:
Q  1 cattgaaaagattttgggttcgggggttagtta 33  Q
    |||||||||||||||||||||||||||||||||    
T  14879825 cattgaaaagattttgggttcgggggttagtta 14879857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 14891678 - 14891710
Alignment:
Q  1 cattgaaaagattttgggttcgggggttagtta 33  Q
    |||||||||||||||||||||||||||||||||    
T  14891678 cattgaaaagattttgggttcgggggttagtta 14891710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 159
Target Start/End: Original strand, 17218096 - 17218159
Alignment:
Q  96 aagaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgaca 159  Q
    |||| ||||| |||||||| || ||||||||||||| | ||| ||||||||||||| |||||||    
T  17218096 aagactattcagggtcagacggcgtatgaatgtagggtgttaggtcaaaaattggggtatgaca 17218159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 149
Target Start/End: Complemental strand, 37468097 - 37468058
Alignment:
Q  110 tcagagggtgtatgaatgtaggttcttaagtcaaaaattg 149  Q
    ||||||||||||||||| || |||||||||||||||||||    
T  37468097 tcagagggtgtatgaatataagttcttaagtcaaaaattg 37468058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 6970957 - 6971031
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||| |||| ||  || ||| |||||||||| ||  || ||||||||||||||    
T  6970957 ttgaaaagatttagggttcgggggttggttatatttagggaaggtattagcaccctaaatatttgtagtactcta 6971031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 44363482 - 44363522
Alignment:
Q  119 gtatgaatgtaggttcttaagtcaaaaattgggatatgaca 159  Q
    ||||||||||||| |||||||||||||||| || |||||||    
T  44363482 gtatgaatgtaggatcttaagtcaaaaattagggtatgaca 44363522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 12368585 - 12368660
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || ||||||| |||||||| ||||||||||||    
T  12368585 attgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgtctgtagtactcta 12368660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 24700438 - 24700364
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  24700438 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 24700364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 21070447 - 21070372
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  21070447 attgaaaagattttgggttcgggggttagttacataaagggaaggttttagcaccctttatgtccgtagtactcta 21070372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 22516866 - 22516941
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||||||  |||||||||||    
T  22516866 attgaaaagattttgggttcgggggttagttacataaagggaaggtactagcaccctttatgtccgtagtactcta 22516941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 45487293 - 45487364
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  45487293 aaaagattttgggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 45487364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 16931 - 17006
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||| ||||||||||| |||||| ||||||| ||||||||  |||||||||||    
T  16931 attgaaaagatttagggttcgggggttggttacataaagagaatgtgttagcaccctttatgtccgtagtactcta 17006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 17331653 - 17331728
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  17331653 attgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 17331728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 378469 - 378395
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| || |||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  378469 ttgaaaagatttaggattcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 378395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 12376512 - 12376438
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  12376512 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 12376438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 12390339 - 12390265
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  12390339 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 12390265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 18971813 - 18971886
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  18971813 ttgaaaagattttgggttcgggg-ttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 18971886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 18991553 - 18991479
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  18991553 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 18991479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 22936262 - 22936188
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||  ||| || ||||||| ||||||||  |||||||||||    
T  22936262 ttgaaaagattttgggttcgggggttagttacataaaaggaaggtgttagcaccctttatgtccgtagtactcta 22936188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 22942225 - 22942151
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||  ||| || ||||||| ||||||||  |||||||||||    
T  22942225 ttgaaaagattttgggttcgggggttagttacataaaaggaaggtgttagcaccctttatgtccgtagtactcta 22942151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 22956120 - 22956046
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||  ||| || ||||||| ||||||||  |||||||||||    
T  22956120 ttgaaaagattttgggttcgggggttagttacataaaaggaaggtgttagcaccctttatgtccgtagtactcta 22956046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 24690175 - 24690113
Alignment:
Q  97 agaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgaca 159  Q
    |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||    
T  24690175 agaatattatgggttagagggtgtatgaatgtaggttcttaggtcaaaaattggggtatgaca 24690113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 24691600 - 24691526
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||| ||| ||||||||  |||| ||||||    
T  24691600 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattaacaccctttatgtccgtagcactcta 24691526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 24699526 - 24699464
Alignment:
Q  97 agaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgaca 159  Q
    |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||    
T  24699526 agaatattatgggttagagggtgtatgaatgtaggttcttaggtcaaaaattggggtatgaca 24699464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 29756324 - 29756250
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| |||||||||| |||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  29756324 ttgaaaagatttagggttcggggtttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 29756250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 39651496 - 39651422
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  39651496 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 39651422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 38083103 - 38083177
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| |||||| |  |||||||||||    
T  38083103 ttgaaaagatttagggttcgggggttagttacataaagggaaggttttagcaccctttatttccgtagtactcta 38083177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 18973130 - 18973194
Alignment:
Q  96 aagaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgacag 160  Q
    ||||||||| ||||||||| ||||||||||||||| |||||  ||||||||||||| ||||||||    
T  18973130 aagaatattatgggtcagatggtgtatgaatgtagattctttggtcaaaaattggggtatgacag 18973194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 21066705 - 21066633
Alignment:
Q  3 ttgaaaagatttt-gggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtact 74  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  ||||||||    
T  21066705 ttgaaaagattttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtact 21066633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 11875195 - 11875120
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| || ||||||   |||||||  |||||||||||    
T  11875195 attgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaacttttatgtccgtagtactcta 11875120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 36736760 - 36736690
Alignment:
Q  7 aaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||| ||||||||| ||||||||||||||  ||| ||||||||||  |||||||  |||||||||||    
T  36736760 aaagatttagggttcgggcgttagttacataaaaggaaggtattagcaccttttatgtccgtagtactcta 36736690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 19883037 - 19883108
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||| |||||| |||||| |||| |||||| ||| ||||||| || ||||||||  |||||||||||    
T  19883037 aaaagatttagggttcaggggttggttatataaagggaaggtattagtaccctttatgtccgtagtactcta 19883108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 40387037 - 40387087
Alignment:
Q  110 tcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgacag 160  Q
    ||||||||||||| |||||||| ||||| || |||||||||| ||||||||    
T  40387037 tcagagggtgtataaatgtagggtcttaggtaaaaaattggggtatgacag 40387087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 17333892 - 17333932
Alignment:
Q  119 gtatgaatgtaggttcttaagtcaaaaattgggatatgaca 159  Q
    ||||||||||||| ||||| ||||||||||||| |||||||    
T  17333892 gtatgaatgtagggtcttaggtcaaaaattggggtatgaca 17333932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 19884407 - 19884459
Alignment:
Q  97 agaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattg 149  Q
    |||||||| ||| ||| |||||||||||||||| ||| ||| |||||||||||    
T  19884407 agaatattttggatcatagggtgtatgaatgtaagtttttaggtcaaaaattg 19884459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 6195916 - 6195991
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || ||||||| |||||||| ||||||||||||    
T  6195916 attgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgtctgtagtactcta 6195991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 20640294 - 20640369
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||| |||||||||||    
T  20640294 attgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgttcgtagtactcta 20640369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 15472471 - 15472545
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||| |||| |||||||| ||||||||||||    
T  15472471 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattggcaccctttatgtctgtagtactcta 15472545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 39456437 - 39456363
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  39456437 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 39456363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 6203767 - 6203842
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  6203767 attgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 6203842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 22568799 - 22568874
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  22568799 attgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 22568874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 51969230 - 51969159
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtact 74  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| |||||||| |||||||||    
T  51969230 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtctgtagtact 51969159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 2415337 - 2415411
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  2415337 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 2415411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 16886884 - 16886810
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  16886884 ttgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 16886810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 22110649 - 22110723
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||||||    
T  22110649 ttgaaaagattttgggttcgggggttagttccataaagggaaggtattagcaccctttatgtccgtagtactcta 22110723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 22114498 - 22114572
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||||||    
T  22114498 ttgaaaagattttgggttcgggggttagttccataaagggaaggtattagcaccctttatgtccgtagtactcta 22114572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 22429381 - 22429307
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  22429381 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 22429307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 22838089 - 22838163
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| |||||||| |||||||||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  22838089 ttgaaaagatttagggttcggaggttagttacataaagggaaggtattagcaccctttatgttcgtagtactcta 22838163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 1957301 - 1957230
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||||||    
T  1957301 aaaagattttgggttcgggggttagttccataaagggaaggtattagcaccctttatgtccgtagtactcta 1957230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 1962995 - 1962924
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||||||    
T  1962995 aaaagattttgggttcgggggttagttccataaagggaaggtattagcaccctttatgtccgtagtactcta 1962924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 14803380 - 14803451
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||||||    
T  14803380 aaaagattttgggttcgggggttagttccataaagggaaggtattagcaccctttatgtccgtagtactcta 14803451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 14812254 - 14812325
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||||||    
T  14812254 aaaagattttgggttcgggggttagttccataaagggaaggtattagcaccctttatgtccgtagtactcta 14812325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 25924706 - 25924781
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| |||||||||| ||||||||  |||||||||||    
T  25924706 attgaaaagatttagggttcgggggttagttacacaaagggaaggtattagcaccctttatgtacgtagtactcta 25924781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 5622325 - 5622399
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  5622325 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 5622399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 5636464 - 5636538
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  5636464 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 5636538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 13187796 - 13187722
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||| ||||    
T  13187796 ttgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtattcta 13187722  T

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Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 20978051 - 20978125
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| |||||||||||||| |||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  20978051 ttgaaaagatttagggttcgggggttaattacataaagggaaggtattagcaccctttatgtccgtagtactcta 20978125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 51968012 - 51967950
Alignment:
Q  97 agaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgaca 159  Q
    |||||||| |||||||||||||||||||||||||||||||| || |||||||||| |||||||    
T  51968012 agaatattatgggtcagagggtgtatgaatgtaggttcttaggtaaaaaattggggtatgaca 51967950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26196963 - 26197039
Alignment:
Q  1 cattgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||| ||||||||||||||||||||||||  ||| || ||||||| ||||||||  |||||||||||    
T  26196963 cattgaaaagatttagggttcgggggttagttacataaaaggaaggtgttagcaccctttatgtccgtagtactcta 26197039  T

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Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 14818858 - 14818929
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||| ||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||||||    
T  14818858 aaaagattttgggtttgggggttagttccataaagggaaggtattagcaccctttatgtccgtagtactcta 14818929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 15473850 - 15473912
Alignment:
Q  97 agaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgaca 159  Q
    |||||||| |||||||||||||||||||||||| | ||||| ||||||||||||| |||||||    
T  15473850 agaatattatgggtcagagggtgtatgaatgtatgctcttaggtcaaaaattggggtatgaca 15473912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 28426841 - 28426770
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtact 74  Q
    |||||||||||| |||||| |||||| ||||||||||| ||| |||||| ||| |||||||| |||||||||    
T  28426841 ttgaaaagatttagggttcaggggttggttacataaagggaaggtattaacaccctttatgtatgtagtact 28426770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 20520265 - 20520191
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||| |||||| || ||| |||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  20520265 ttgaagagatttaggattctggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 20520191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 44908813 - 44908879
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagta 72  Q
    ||||||||| ||||||||||||||||||||||||| ||| |||  ||||| |||||||| |||||||    
T  44908813 aaaagatttagggttcgggggttagttacataaagggaaggtaccagcaccctttatgtctgtagta 44908879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 45499094 - 45499020
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| |||||||| |||||||||| ||||| ||| |||||||||| ||||||||   ||||||||||    
T  45499094 ttgaaaagatttagggttcggaggttagttacttaaagggaaggtattagcaccctttatgtccatagtactcta 45499020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 47109839 - 47109776
Alignment:
Q  14 ttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||| |||||||||||||||||| ||| |||||| ||| ||||||||  |||||||||||    
T  47109839 ttgggttccggggttagttacataaagggaaggtattatcaccctttatgtccgtagtactcta 47109776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 47111253 - 47111191
Alignment:
Q  12 ttttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtact 74  Q
    ||||||||||||||||||||||||||||| |||  ||||| ||| ||||||||  ||||||||    
T  47111253 ttttgggttcgggggttagttacataaagggaagatattaacaccctttatgtccgtagtact 47111191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 18217085 - 18217051
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacat 36  Q
    ||||||||||||| |||||||||||||||||||||    
T  18217085 attgaaaagatttagggttcgggggttagttacat 18217051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 20430834 - 20430760
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||| |||| ||  || ||| || ||||||||||  || || |||||||||||    
T  20430834 ttgaaaagattttgggttcgggggttggttatatttagggaaggtgttagcactctaaatattcgtagtactcta 20430760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 44910963 - 44911007
Alignment:
Q  116 ggtgtatgaatgtaggttcttaagtcaaaaattgggatatgacag 160  Q
    ||||||||||||| |||||||| || ||||||||| |||||||||    
T  44910963 ggtgtatgaatgtgggttcttaggtaaaaaattggaatatgacag 44911007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2175 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold2175
Description:

Target: scaffold2175; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 661 - 587
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  661 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgttcgtagtactcta 587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0458 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 7280 - 7354
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  7280 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 7354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 4493 - 4567
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  4493 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 4567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 2388 - 2314
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  2388 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 2314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 16718797 - 16718871
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  16718797 ttgaaaagattttgggttcgggggttagttacataaagcgaaggtattagcaccctttatgtccgtagtactcta 16718871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 14927026 - 14926952
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| | ||||||  |||||||||||    
T  14927026 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccccttatgtccgtagtactcta 14926952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 15887546 - 15887620
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  15887546 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 15887620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 20840788 - 20840862
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| | ||||||  |||||||||||    
T  20840788 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccccttatgtccgtagtactcta 20840862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 25986633 - 25986559
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  25986633 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 25986559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 44623984 - 44623910
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  44623984 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 44623910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 8657610 - 8657547
Alignment:
Q  97 agaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgacag 160  Q
    |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||    
T  8657610 agaatattatgggtcaaagggtgtatgaatgtaggttcttaggtcaaaaattggggtatgacag 8657547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 13102333 - 13102258
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| ||  |||||||||||    
T  13102333 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttacgtccgtagtactcta 13102258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 18037757 - 18037682
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| ||  |||||||||||    
T  18037757 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttacgtccgtagtactcta 18037682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 18382065 - 18382140
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| ||  |||||||||||    
T  18382065 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttacgtccgtagtactcta 18382140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 41150922 - 41150847
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  41150922 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 41150847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 3441527 - 3441453
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||| ||| | ||||||  |||||||||||    
T  3441527 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattaacaccccttatgtccgtagtactcta 3441453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 9186337 - 9186263
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  9186337 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 9186263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 12427824 - 12427750
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| |||  ||||||||| ||||||||  |||||||||||    
T  12427824 ttgaaaagatttagggttcgggggttagttacataaagggaagttattagcaccctttatgtccgtagtactcta 12427750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 9191754 - 9191683
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtact 74  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  ||||||||    
T  9191754 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtact 9191683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 55791871 - 55791946
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||| ||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  55791871 attgaaaagatttagggttcgggggttggttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 55791946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 18182 - 18108
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| |||| |||  |||||||||||    
T  18182 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttttgtccgtagtactcta 18108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 3834656 - 3834730
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||  ||| || ||||||| ||||||||  |||||||||||    
T  3834656 ttgaaaagatttagggttcgggggttagttacataaaaggaaggtgttagcaccctttatgtccgtagtactcta 3834730  T

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Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 16369340 - 16369266
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| | ||||| ||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  16369340 ttgaaaagatttagagttcgagggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 16369266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 18217616 - 18217542
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||| |||| ||||||||||||||||||||||||  ||| |||||||||| ||||||||  |||||||||||    
T  18217616 ttgaaaaaatttagggttcgggggttagttacataaaaggaaggtattagcaccctttatgtccgtagtactcta 18217542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 22705465 - 22705391
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  | |||||||||    
T  22705465 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgcagtactcta 22705391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 22714436 - 22714362
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  | |||||||||    
T  22714436 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgcagtactcta 22714362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 7946154 - 7946082
Alignment:
Q  4 tgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||  |||||| ||||    
T  7946154 tgaaaagattttgggttcgggg-ttagttacataaagggaaggtattagcaccctttatgtccgtagtattcta 7946082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 39537300 - 39537239
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgt 64  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||    
T  39537300 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgt 39537239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 15565909 - 15565984
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||| | |||||||||||||||||| |||||| |||  ||||||||| ||||||||  |||||||||||    
T  15565909 attgaaaagatatagggttcgggggttagttatataaagggaaaatattagcaccctttatgtccgtagtactcta 15565984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 15578556 - 15578631
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||| | |||||||||||||||||| |||||| |||  ||||||||| ||||||||  |||||||||||    
T  15578556 attgaaaagatatagggttcgggggttagttatataaagggaaaatattagcaccctttatgtccgtagtactcta 15578631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 22173617 - 22173692
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||| ||||||||||| ||| || ||||||| ||||||||   ||||||||||    
T  22173617 attgaaaagatttagggttcgggggttggttacataaagggaaggtgttagcaccctttatgtccatagtactcta 22173692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 14883016 - 14882942
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||| |||| ||||||||| |||| |||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  14883016 ttgaaaatatttagggttcgggtgttaattacataaagggaaggtattagcaccctttatgtccgtagtactcta 14882942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 14899736 - 14899662
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||  ||||| ||||||| |||||||||| ||| |||||| ||| |||||||| ||||||||||||    
T  14899736 ttgaaaagatttaaggttcaggggttaattacataaagggaaggtattatcaccctttatgtctgtagtactcta 14899662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 7114025 - 7114086
Alignment:
Q  16 gggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||| |||||| ||| |||||||||| |||||||  ||||||||||||    
T  7114025 gggttcgggggttagttaaataaagagaaggtattagcaccctttatgcctgtagtactcta 7114086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14437942 - 14437867
Alignment:
Q  1 cattgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||| ||||||||| |||| |||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  14437942 cattaaaaagatttagggt-cgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 14437867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 3369679 - 3369610
Alignment:
Q  4 tgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtac 73  Q
    ||||||||||| ||||||||| ||| ||||||||||  ||| ||||||| || ||||||||| |||||||    
T  3369679 tgaaaagatttagggttcgggagttggttacataaatggaaggtattagtaccctttatgttcgtagtac 3369610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 18481919 - 18481964
Alignment:
Q  10 gattttgggttcgggggttagttacataaagtgaatgtattagcac 55  Q
    |||||| |||||||||||||||||| ||||| |||||| |||||||    
T  18481919 gattttaggttcgggggttagttacgtaaagggaatgtgttagcac 18481964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 40958389 - 40958426
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaag 40  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  40958389 ttgaaaagatttagggttcgggggttagttacacaaag 40958426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 40960000 - 40960037
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaag 40  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  40960000 ttgaaaagatttagggttcgggggttagttacacaaag 40960037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 9010 - 8949
Alignment:
Q  98 gaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgaca 159  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9010 gaatattatgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattaggatatgaca 8949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0378
Description:

Target: scaffold0378; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 2960 - 2885
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  2960 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 2885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 15440 - 15365
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  15440 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 15365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 7347 - 7422
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||||||  |||||||||||    
T  7347 attgaaaagattttgggttcgggggttagttacataaagggaaggtactagcaccctttatgtccgtagtactcta 7422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 39007 - 39082
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  39007 attgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 39082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 20624 - 20704
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactctaatggaa 83  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| |  |||||  |||||||||||| ||||    
T  20624 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcacacaatatgtccgtagtactctaagggaa 20704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 116105 - 116176
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtact 74  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||  ||||||| |||||||||    
T  116105 ttgaaaagattttggattcgggggttagttacataaagggaatgtattagcaccatttatgtctgtagtact 116176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 200864 - 200939
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||||||  |||||||||||    
T  200864 attgaaaagattttgggttcgggggttagttacataaagggaaggtactagcaccctttatgtccgtagtactcta 200939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1818 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1818
Description:

Target: scaffold1818; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 894 - 968
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||||||    
T  894 ttgaaaagattttgggttcgggggttagttccataaagggaaggtattagcaccctttatgtccgtagtactcta 968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1796 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1796
Description:

Target: scaffold1796; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 1131 - 1057
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||| ||||||||||||||||| ||| |||||||||| |||||||| ||||||||||||    
T  1131 ttgaaaagatttagggttcgagggttagttacataaagggaaggtattagcaccctttatgtctgtagtactcta 1057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 3489 - 3563
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| | |||||| ||||||||||||    
T  3489 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccccttatgtctgtagtactcta 3563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 3035 - 2961
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| || ||||||| |||| ||| ||||||||||||    
T  3035 ttgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttttgtctgtagtactcta 2961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 1874 - 1800
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| | ||||||  |||||||||||    
T  1874 ttgaaaagattttgggttcgggggttagttacataaagggaaggtattagcaccccttatgtccgtagtactcta 1800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 4469 - 4543
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  4469 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 4543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 13048 - 12974
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||||||    
T  13048 ttgaaaagattttgggttcgggggttagttgcataaagggaaggtattagcaccctttatgtccgtagtactcta 12974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 17116 - 17042
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||| | ||| |||||||||| ||||||||  |||||||||||    
T  17116 ttgaaaagattttgggttcgggggttagttacataaggggaaggtattagcaccctttatgtccgtagtactcta 17042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 29920 - 29846
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  29920 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 29846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 15744 - 15670
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||||  |||||||||||    
T  15744 ttgaaaagattttgggttcgggggttagttacataaagggaaggtatcagcaccctttatgtccgtagtactcta 15670  T

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Target: scaffold0067 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 42503 - 42577
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  42503 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 42577  T

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Target: scaffold0037 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 76899 - 76973
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||| ||||||||||||||| |||||||||||||| ||||||||  |||||||||||    
T  76899 ttgaaaagatttagggttcgggagttagttacataaagggaatgtattagcaccctttatgtccgtagtactcta 76973  T

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Target: scaffold0029 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 101339 - 101265
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| || ||||||| |||| ||| ||||||||||||    
T  101339 ttgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttttgtctgtagtactcta 101265  T

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Target: scaffold0029; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 22027 - 21953
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  22027 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 21953  T

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Target: scaffold0029; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 35768 - 35694
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  35768 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 35694  T

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Target: scaffold0001 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 12280 - 12206
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  12280 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 12206  T

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Target: scaffold0138 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 6366 - 6293
Alignment:
Q  4 tgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  6366 tgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 6293  T

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Target: scaffold0138; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 9635 - 9562
Alignment:
Q  4 tgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  9635 tgaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 9562  T

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Target: scaffold0362 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 2685 - 2757
Alignment:
Q  5 gaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  2685 gaaaagattttgggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 2757  T

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Target: scaffold0002 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 360815 - 360891
Alignment:
Q  1 cattgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  360815 cattgaaaagattttggattcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 360891  T

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Target: scaffold0002; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 298746 - 298671
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  298746 attgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 298671  T

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Target: scaffold1689 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1689
Description:

Target: scaffold1689; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 1267 - 1342
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| ||  |||||||||||    
T  1267 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttacgtccgtagtactcta 1342  T

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Target: scaffold0721 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0721
Description:

Target: scaffold0721; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 1055 - 1130
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| ||  |||||||||||    
T  1055 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttacgtccgtagtactcta 1130  T

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Target: scaffold0243 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 22976 - 22905
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| |||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  22976 aaaagattttggtttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 22905  T

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Target: scaffold0238 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 26685 - 26760
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| ||  |||||||||||    
T  26685 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttacgtccgtagtactcta 26760  T

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Target: scaffold0068 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 15943 - 16018
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| ||  |||||||||||    
T  15943 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttacgtccgtagtactcta 16018  T

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Target: scaffold0068; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 23862 - 23937
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| ||  |||||||||||    
T  23862 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttacgtccgtagtactcta 23937  T

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Target: scaffold0034 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 117373 - 117448
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  117373 attgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 117448  T

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Target: scaffold1494 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1494
Description:

Target: scaffold1494; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 150 - 76
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  150 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 76  T

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Target: scaffold0643 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 635 - 561
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||   ||||||||||    
T  635 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttatgtccatagtactcta 561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 11019 - 11093
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| | ||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  11019 ttgaaaagatttagagttcgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 11093  T

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Target: scaffold0320 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 4955 - 5029
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| |||||| |||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  4955 ttgaaaagatttagggttcaggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 5029  T

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Target: scaffold0114 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 33086 - 33160
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| ||  |||||||||||    
T  33086 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctttacgtccgtagtactcta 33160  T

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Target: scaffold0104 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 11457 - 11531
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||| ||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  11457 ttgaaaagattttgggttcgagggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 11531  T

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Target: scaffold0094 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 22538 - 22612
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  22538 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 22612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 54998 - 54924
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||| ||||||| ||||||| ||| |||||||||| ||||||||  |||||||||||    
T  54998 ttgaaaagattttgggttcgggtgttagttccataaagggaaggtattagcaccctttatgtccgtagtactcta 54924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 21480 - 21554
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  21480 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 21554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 3240 - 3314
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||||||||||| |||||||  || |||| ||||| |||||||| ||||||||||||    
T  3240 ttgaaaagattttgggttcgggggttagttccataaaggaaaggtataagcaccctttatgtctgtagtactcta 3314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 91779 - 91705
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||  ||| |||||| ||| |||||||| ||||||||||||    
T  91779 ttgaaaagatttagggttcgggggttagttacataaatggaaagtattaacaccctttatgtctgtagtactcta 91705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 33213 - 33273
Alignment:
Q  97 agaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatga 157  Q
    |||||||| |||||||||||||||||||||||||||||||| |||| || ||||| |||||    
T  33213 agaatattatgggtcagagggtgtatgaatgtaggttcttaggtcataagttggggtatga 33273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 88462 - 88536
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||| ||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  88462 ttgaaaagatttagggtttgggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 88536  T

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Target: scaffold0014 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 5777 - 5703
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||| |||||||||||||| |||| ||| |||||||||| ||||||||  |||||||||||    
T  5777 ttgaaaagattttgggtttgggggttagttacacaaagggaaggtattagcaccctttatgtccgtagtactcta 5703  T

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Target: scaffold1623 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1623
Description:

Target: scaffold1623; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 279 - 354
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || || ||  |||||||||||    
T  279 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctatacgtccgtagtactcta 354  T

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Target: scaffold0799 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0799
Description:

Target: scaffold0799; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 5454 - 5529
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||| ||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  5454 attgaaaagatttagggttcgggggttggttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 5529  T

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Target: scaffold0755 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0755
Description:

Target: scaffold0755; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 2799 - 2724
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  | |||||||||    
T  2799 attgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgaagtactcta 2724  T

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Target: scaffold0236 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 26899 - 26958
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactcttta 61  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| |||||    
T  26899 attgaaaagatttagggttcgggggttagttacataaagggaaggtattagcacccttta 26958  T

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Target: scaffold0202 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 25705 - 25776
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||| ||||  |||||||||||    
T  25705 aaaagatttagggttcgggggttagttacataaagggaaggtattagcacccttcatgtccgtagtactcta 25776  T

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Target: scaffold0016 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 15571 - 15500
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtact 74  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||  ||||||||    
T  15571 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttatgtccgtagtact 15500  T

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Target: scaffold0007 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 193 - 118
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||| ||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  193 attgaaaagatttagggttcgggggttggttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 118  T

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Target: scaffold1699 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1699
Description:

Target: scaffold1699; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 1368 - 1430
Alignment:
Q  97 agaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgaca 159  Q
    |||||||| ||||| |||||||||||||||||||||||||| || |||||||||| |||||||    
T  1368 agaatattatgggttagagggtgtatgaatgtaggttcttaggtaaaaaattggggtatgaca 1430  T

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Target: scaffold0431 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 858 - 932
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||  | |||||||||    
T  858 ttgaaaagatttagggttcgggggttagttacataaagggaaggtattagcaccctctatgtccgcagtactcta 932  T

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Target: scaffold0182 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 7308 - 7234
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| |||||||||||||||||||| |||| ||| ||||||||||  |||||||  |||||||||||    
T  7308 ttgaaaagatttagggttcgggggttagttacacaaagggaaggtattagcaccttttatgtccgtagtactcta 7234  T

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Target: scaffold0132 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 30345 - 30271
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||| ||||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  30345 ttgaaaagatttagggttcgggagttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 30271  T

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Target: scaffold0075 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 57880 - 57806
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| |||| |||  |||||||||||    
T  57880 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttagcaccctttttgtccgtagtactcta 57806  T

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Target: scaffold0031 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 32357 - 32431
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| |||||||||| || ||||||||||| ||| |||| ||||| ||||||||| |||||||||||    
T  32357 ttgaaaagatttagggttcggggattggttacataaagggaaagtataagcaccctttatgttcgtagtactcta 32431  T

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Target: scaffold1473 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1473
Description:

Target: scaffold1473; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 1171 - 1102
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagta 72  Q
    ||||||||||||  ||||||||||||||||| |||||| ||| |||||||||| |||||||| |||||||    
T  1171 ttgaaaagatttaaggttcgggggttagttatataaagggaaggtattagcaccctttatgtctgtagta 1102  T

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Target: scaffold0119 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 40175 - 40236
Alignment:
Q  98 gaatattctgggtcagagggtgtatgaatgtaggttcttaagtcaaaaattgggatatgaca 159  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||||||||  |||||||    
T  40175 gaatattctggatcaaagggtgtatgaatgtaggttcttaggtcaaaaattggagtatgaca 40236  T

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Target: scaffold0351 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 1236 - 1311
Alignment:
Q  2 attgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||||||| ||||||||||||||||| |||||||  || || ||||||| ||||||||  |||||||||||    
T  1236 attgaaaagatttagggttcgggggttagttccataaaggaaaggtgttagcaccctttatgtccgtagtactcta 1311  T

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Target: scaffold0540 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 956 - 1030
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||| ||||||||| ||| || ||||||| ||||||||  || ||||||||    
T  956 ttgaaaagatttagggttcgggggttagctacataaagggaaggtgttagcaccctttatgtccgtggtactcta 1030  T

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Target: scaffold0473 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 936 - 1010
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||| ||| ||| ||||  |||||||||||    
T  936 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttaacacccttcatgtccgtagtactcta 1010  T

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Target: scaffold0473; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 7062 - 7136
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||| ||| ||| ||||  |||||||||||    
T  7062 ttgaaaagatttagggttcgggggttagttacataaagggaaggtgttaacacccttcatgtccgtagtactcta 7136  T

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Target: scaffold0167 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 483 - 417
Alignment:
Q  11 attttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||| |||||| |||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  483 atttagggttctggggttagttacataaagggaaggtattagcaccctttatgtccgtagtactcta 417  T

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Target: scaffold0092 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 15320 - 15247
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||| | |||||| |||||||||||||||| ||| |||||||||| ||||||| | |||||||||||    
T  15320 ttgaaaagatttagagttcggaggttagttacataaagggaaggtattagcaccctttatg-tcgtagtactcta 15247  T

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Target: scaffold0066 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 42718 - 42779
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgt 64  Q
    |||||||||||| ||||||||||||| ||||||||||| ||| |||||||||| ||| ||||    
T  42718 ttgaaaagatttagggttcgggggttggttacataaagggaaggtattagcacccttaatgt 42779  T

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Target: scaffold0085 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 17334 - 17410
Alignment:
Q  1 cattgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||| ||||||||| |||||| ||||||| |||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  17334 cattaaaaagatttagggttcaggggttaattacataaagggaaggtgttagcaccctttatgtccgtagtactcta 17410  T

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Target: scaffold0101 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 14758 - 14828
Alignment:
Q  6 aaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    ||||||||| |||||||||| |||||||||||||| ||| || ||||||| ||||||||  |||||||||||    
T  14758 aaaagatttagggttcgggg-ttagttacataaagggaaggtgttagcaccctttatgtccgtagtactcta 14828  T

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Target: scaffold0065 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 39834 - 39905
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtact 74  Q
    |||||||| ||| ||||| ||||||| ||||||||||| ||| ||||||||||  |||||||| ||||||||    
T  39834 ttgaaaaggtttagggtttgggggttggttacataaagggaaggtattagcaccatttatgttcgtagtact 39905  T

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Target: scaffold0269 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 12622 - 12680
Alignment:
Q  19 ttcgggggttagttacataaagtgaatgtattagcactctttatgtttgtagtactcta 77  Q
    |||||||||||||||||||||| ||| |||||||||| || |||||  |||||||||||    
T  12622 ttcgggggttagttacataaagggaaggtattagcaccctctatgtccgtagtactcta 12680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 5035 - 4998
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaag 40  Q
    |||||||||||| |||||||||||||||||||||||||    
T  5035 ttgaaaagatttagggttcgggggttagttacataaag 4998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0551 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0551
Description:

Target: scaffold0551; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 6019 - 6056
Alignment:
Q  3 ttgaaaagattttgggttcgggggttagttacataaag 40  Q
    |||||||||||| || ||||||||||||||||||||||    
T  6019 ttgaaaagatttaggattcgggggttagttacataaag 6056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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