View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9262_low_75 (Length: 203)
Name: NF9262_low_75
Description: NF9262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9262_low_75 |
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Alignment Details
Target: chr6 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 3859887 - 3859721
Alignment:
| Q |
15 |
cagagactattttgtattttcgctaattaaagaactatggtggctattcgttacccattcaaagacgaaaattactatttgccttatatataactatttg |
114 |
Q |
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| T |
3859887 |
cagagactattttgtattttcgctaattaaagaactatggtggctattcgttacccattcaaagacgaaaattactatttgccttatatataactatttg |
3859788 |
T |
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| Q |
115 |
agaaacaacaaagaaatcactaaccatccagcctgcttcaatgctttcaaactcattaccatttcca |
181 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3859787 |
agaaacaacaaagaaatcactaaccatccagcctgcttcaatgctttcaaactcattaccatttcca |
3859721 |
T |
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