View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9263_low_38 (Length: 288)
Name: NF9263_low_38
Description: NF9263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9263_low_38 |
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Alignment Details
Target: chr2 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 19 - 267
Target Start/End: Complemental strand, 43032073 - 43031825
Alignment:
| Q |
19 |
ggacacacaacaaagactcccttataaccgcaacgctcctagaaaactcaccactcaaccaccaaaaccacaatctccttctcccacttcttcttcacca |
118 |
Q |
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| T |
43032073 |
ggacacacaacaaagactcccttataaccgcaacgctcctagaaaactcaccactcaaccaccaaaaccacaatctccttctcccacttcttcttcacca |
43031974 |
T |
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| Q |
119 |
gcaccttccacccgtaatgaaaattacatttccgatcttctcaaacgcgccactcctcttcccacgataggcaaaatcgaagaagtacaagaacacgatg |
218 |
Q |
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| T |
43031973 |
gcaccttccacccgtaatgaaaattacatttccgatcttctcaaacgcgccactcctcttcccacgataggcaaaatcgaagaagtacaagaacacgatg |
43031874 |
T |
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| Q |
219 |
aaacctatttgggatatgatagatggcttccaactccacctaaagttgt |
267 |
Q |
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| T |
43031873 |
aaacctatttgggatatgatagatggcttccaactccacctaaagttgt |
43031825 |
T |
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