View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9263_low_42 (Length: 261)
Name: NF9263_low_42
Description: NF9263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9263_low_42 |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 13 - 242
Target Start/End: Original strand, 43031409 - 43031638
Alignment:
| Q |
13 |
cagagtaacaataagatttgactttgaagaaacactcacaatcgtcatagaaattacgacgaataccaatcgagattttgtgcctctagcaaaaatgtct |
112 |
Q |
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| T |
43031409 |
cagagtaacaataagatttaactttgaagaaacactcacaatcgtcatagaaattacgacgaataccaatcgagattttgtgcctctagcaaaaatgtct |
43031508 |
T |
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| Q |
113 |
caatgtattgcttctattttattttatgtcatttcatattcaccttcaccagctagttcaataacaaattttactaaatcttaggaattcaatcttccgg |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43031509 |
caatgtattgcttctattttattttatgtcatttcatattcaccttcaccagctagttcaataacaaattttactaaatcttaggaattcaatcttccgg |
43031608 |
T |
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| Q |
213 |
cttatccactgtcagcaaacttatctacta |
242 |
Q |
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|||||||||| ||||||||||||||||||| |
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| T |
43031609 |
cttatccactatcagcaaacttatctacta |
43031638 |
T |
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