View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9263_low_53 (Length: 233)
Name: NF9263_low_53
Description: NF9263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9263_low_53 |
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Alignment Details
Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 18 - 228
Target Start/End: Original strand, 14761740 - 14761950
Alignment:
| Q |
18 |
tgagaaacctaaaatctgtaacttgatcaagtctagggaaaatagcaatgatgctcatgaacattcaacaaagttcatagttatgaaaatgtgaaatcaa |
117 |
Q |
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| T |
14761740 |
tgagaaacctaaaatctgtaacttgatcaagtccagggaaaatagcaatgatgctcatgaacattcaacaaagttcatagttatgaaaatgtgaaatcaa |
14761839 |
T |
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| Q |
118 |
aatcaggtggtcacataataatgcataaagatggagagcatcatgaactaacagtaaattgatgatcatcttcatctgaatcattgttcctattcctgat |
217 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14761840 |
aatcaggtggtcacataatattgcataaagatggagagcatcatgaactaacagtaaattgatgatcatcttcatctgaatcattgttcctattcctgat |
14761939 |
T |
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| Q |
218 |
ctctgcttctc |
228 |
Q |
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| T |
14761940 |
atctgtttctc |
14761950 |
T |
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