View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9263_low_54 (Length: 231)
Name: NF9263_low_54
Description: NF9263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9263_low_54 |
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Alignment Details
Target: chr2 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 47 - 213
Target Start/End: Original strand, 10231481 - 10231651
Alignment:
| Q |
47 |
cttgttttcttttattgagggccctttgatttcattccttgtttgtgtacaatt----tataaatatatagaacataaatttttaccaaaatcaaacaag |
142 |
Q |
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| T |
10231481 |
cttgttttcttttattgagggccctttgatttcattccttgtttgtgtacaattagaatataaatatatagaacataaatttttaccaaaatcaaacaag |
10231580 |
T |
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| Q |
143 |
ttggtagaagatgtgatacctagtgacagctcccattgatcgtccccagagacctatacgagatacttgtt |
213 |
Q |
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| T |
10231581 |
ttggtagaagatgtgatacctagtgacagctcccattgatcgtccccagagacctatacgagatacttgtt |
10231651 |
T |
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