View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9264A_low_178 (Length: 300)
Name: NF9264A_low_178
Description: NF9264A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9264A_low_178 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 45459137 - 45459436
Alignment:
| Q |
1 |
aatattcaaaatgtgtgtgtcatgttcttcattgacgatgatgttcttaattttactaataataatgttgtttcccttatctataacctgttttgacata |
100 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45459137 |
aatattcaaaatgtgtgtgtcatgttcttcattgacaatgatgttcttaattttactaataataatgttgtttcccttatctataacctgttttgacata |
45459236 |
T |
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| Q |
101 |
acaaaaatattgtcccagtaccctgcatacagcagttacagcaactacctcacccaaacccaactagcaaccgaaataaactcgagacaaacgataacag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45459237 |
acaaaaatattgtcccagtaccctgcatacagcagttacagcaactacctcacccaaacccaactagcaaccgaaataaactcgagacaaacgataacag |
45459336 |
T |
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| Q |
201 |
ttcttgcagtcgataacagtgggatggcacctatctcaggaaaaccaatggatgtgatcaagaaggtgttaagcatccacgtcatcctcgactactttga |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45459337 |
ttcttgcagtcgataacagtgggatggcacctatctcaggaaaaccaatggatgtgatcaagaaggtgttaagcatccacgtcatcctcgactactttga |
45459436 |
T |
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