View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9264A_low_196 (Length: 294)
Name: NF9264A_low_196
Description: NF9264A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9264A_low_196 |
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Alignment Details
Target: chr5 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 7 - 277
Target Start/End: Original strand, 2942749 - 2943019
Alignment:
| Q |
7 |
ttattgcctctatagaaagcttttgaatatgagtttgacaggtttccttttctctaggagcccgggaaagatcataagtgtaagtgtccctacatttgaa |
106 |
Q |
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| T |
2942749 |
ttattgtctctatagaaagcttttgaatattagtttgacaggtttccttttttctaggagcccgggaaagatcataagtgtaagtgtccctacatttgaa |
2942848 |
T |
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| Q |
107 |
gcccttactcaatttggagttgctacaatcaccactaagaatactggtgaggtggaagcatcatatagtttgacggtattctgattctcaacccttcctt |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
2942849 |
gcccttactcaatttggagttgctacaatcaccactaagaatactggtgaggtggaagcatcatatagtttgacggtattctgattctcaacctttcctt |
2942948 |
T |
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| Q |
207 |
catagttcttacattctttgtaaagttctatagtgttcttcatggcatctatttttgttatacagttctac |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2942949 |
catagttcttacattctttgtaaagttctatagtgttcttcatggcatctatttttgttatacagttctac |
2943019 |
T |
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