View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9264A_low_197 (Length: 293)
Name: NF9264A_low_197
Description: NF9264A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9264A_low_197 |
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Alignment Details
Target: chr3 (Bit Score: 268; Significance: 1e-150; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 268; E-Value: 1e-150
Query Start/End: Original strand, 20 - 291
Target Start/End: Complemental strand, 39964172 - 39963901
Alignment:
| Q |
20 |
tcatagcaccatttctattttctttctgaaattgagaacgcagtgacacagaaaacaaagcataaaccatagaaaaagatctactagttagggtttaata |
119 |
Q |
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| T |
39964172 |
tcatagcaccatttctattttctttctgaaattgagaacgcagtgacacagaaaacaaagcataaaccatagaaaaagatctactagttagggtttaata |
39964073 |
T |
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| Q |
120 |
accatggcggaggagacttatgctatggacatcgacgttacagacaagggcaaaaccgtcattgccgccggtaacccttccttcggtggcaaagcttcgc |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39964072 |
accatggcggaggagacttatgctatggacatcgacgtcacagacaagggcaaaaccgtcattgccgccggtaacccttccttcggtggcaaagcttcgc |
39963973 |
T |
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| Q |
220 |
tatgggttgaaaagtatcgtcctcaatccctcgacgacgttgcagctcaccgcgacatcgttgacacaagta |
291 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39963972 |
tatgggttgaaaagtatcgtcctcaatccctcgacgacgttgcagctcaccgcgacatcgttgacacaagta |
39963901 |
T |
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