View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9264A_low_245 (Length: 271)
Name: NF9264A_low_245
Description: NF9264A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9264A_low_245 |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 11 - 265
Target Start/End: Complemental strand, 29007616 - 29007362
Alignment:
| Q |
11 |
atacaaccaaatttgaaagtgtaaacagaaacactaaaacacgtgtattacacgattggttaactaacttcaaatgaactaccttagaatggacacaaaa |
110 |
Q |
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| T |
29007616 |
atacaaccaaatttgaaagtgtaaacagaaacactaaaacacgtgtattacacgattgattaactaacttcaaatgaactacctcagaatggacataaaa |
29007517 |
T |
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| Q |
111 |
tcaaatttatcttaattttaaaaaagcataatagaatctaaccttccaagattgttgaccattgtaagcataaacaaaacgagctctcttaacaccttca |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
29007516 |
tcaaatttatcttaattttaaaaaagcataatagaatctaaccttccaagattgttgaccattgtaagcataaacaaaacgagctctcttaacatcttca |
29007417 |
T |
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| Q |
211 |
aacacgttcttgttctcaccttcacaaaggaaatacacagttgaagtcactttta |
265 |
Q |
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| T |
29007416 |
aacacgttcttgttctccccttcacaaaggaaatacacagttgaagtcactttta |
29007362 |
T |
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