View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9264A_low_319 (Length: 250)
Name: NF9264A_low_319
Description: NF9264A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9264A_low_319 |
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Alignment Details
Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 11365179 - 11365418
Alignment:
| Q |
1 |
attactttatactttataatcttacaaaatcataatactcttagctgggtatgagtagcttggtagatatgattaaattttgaaactatggtatgtcact |
100 |
Q |
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| T |
11365179 |
attactttatactttataatcttacaaaatcataatactcttagctgggtataagtagcttggtagatatgattaaattttgaaactatggtatgtcact |
11365278 |
T |
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| Q |
101 |
ttcggtcttgtgaaacgtctcaagactctagctacatattctatattttccaccgtgatttagggagcccattatttatatattgatgttgcattcaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11365279 |
ttcggtcttgtgaaacgtctcaagactctagctacatattctatattttccaccgtgatttagggagcccattatttatatattgatgttgcattcaatt |
11365378 |
T |
|
| Q |
201 |
tatttctaaggctt-tctctaatctaatagggggatattg |
239 |
Q |
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|||||||||||||| ||||||||||||||||||||||||| |
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| T |
11365379 |
tatttctaaggcttctctctaatctaatagggggatattg |
11365418 |
T |
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