View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9264A_low_354 (Length: 247)

Name: NF9264A_low_354
Description: NF9264A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9264A_low_354
NF9264A_low_354
[»] chr7 (29 HSPs)
chr7 (3-235)||(13434608-13434836)
chr7 (3-235)||(35964358-35964586)
chr7 (9-235)||(16897408-16897630)
chr7 (102-235)||(4307594-4307723)
chr7 (3-235)||(33609439-33609667)
chr7 (89-235)||(16463427-16463569)
chr7 (76-235)||(648976-649130)
chr7 (129-235)||(48355827-48355933)
chr7 (129-235)||(15707478-15707584)
chr7 (88-235)||(33612471-33612612)
chr7 (57-235)||(4312964-4313137)
chr7 (129-235)||(10204415-10204521)
chr7 (129-235)||(14941967-14942073)
chr7 (129-235)||(15369560-15369666)
chr7 (129-233)||(25181207-25181311)
chr7 (122-225)||(8880187-8880290)
chr7 (162-235)||(9192548-9192621)
chr7 (151-235)||(8880265-8880349)
chr7 (3-217)||(9194125-9194335)
chr7 (102-228)||(1462304-1462427)
chr7 (3-229)||(48713207-48713430)
chr7 (122-228)||(21005709-21005815)
chr7 (129-228)||(19515618-19515717)
chr7 (7-80)||(5825929-5826002)
chr7 (129-229)||(9004364-9004464)
chr7 (122-188)||(6257763-6257829)
chr7 (5-72)||(17206535-17206602)
chr7 (137-189)||(4461012-4461064)
chr7 (199-235)||(46274119-46274155)
[»] chr3 (25 HSPs)
chr3 (3-235)||(25054759-25054989)
chr3 (3-235)||(11398616-11398843)
chr3 (3-235)||(36075921-36076148)
chr3 (122-235)||(14495047-14495160)
chr3 (129-235)||(14661022-14661128)
chr3 (123-235)||(3245284-3245396)
chr3 (7-83)||(27407081-27407157)
chr3 (7-70)||(7908406-7908469)
chr3 (5-72)||(11827552-11827619)
chr3 (8-83)||(17050615-17050690)
chr3 (10-83)||(17041605-17041678)
chr3 (5-72)||(13418268-13418335)
chr3 (5-72)||(42244687-42244754)
chr3 (181-235)||(3250366-3250420)
chr3 (3-71)||(14659197-14659266)
chr3 (122-189)||(22038656-22038722)
chr3 (3-72)||(17209530-17209598)
chr3 (129-229)||(19567257-19567357)
chr3 (137-189)||(34053879-34053931)
chr3 (78-169)||(3250289-3250375)
chr3 (103-171)||(13601521-13601586)
chr3 (131-189)||(17023014-17023072)
chr3 (3-95)||(11869973-11870065)
chr3 (131-189)||(20225520-20225578)
chr3 (160-229)||(25765981-25766050)
[»] chr6 (30 HSPs)
chr6 (3-235)||(25963649-25963877)
chr6 (3-235)||(25968296-25968524)
chr6 (3-235)||(25949049-25949277)
chr6 (3-235)||(32542984-32543212)
chr6 (122-228)||(5398967-5399073)
chr6 (129-228)||(29253723-29253822)
chr6 (5-72)||(18993077-18993144)
chr6 (11-83)||(20218609-20218681)
chr6 (11-83)||(22112634-22112706)
chr6 (122-189)||(23517585-23517652)
chr6 (5-72)||(25339385-25339452)
chr6 (3-80)||(25923523-25923600)
chr6 (5-85)||(4740851-4740931)
chr6 (3-71)||(29093443-29093511)
chr6 (5-72)||(18627310-18627377)
chr6 (122-189)||(23574910-23574977)
chr6 (122-189)||(26017687-26017754)
chr6 (122-189)||(26157060-26157127)
chr6 (131-189)||(17739400-17739458)
chr6 (129-229)||(5949889-5949990)
chr6 (5-93)||(19993457-19993545)
chr6 (122-189)||(25507371-25507438)
chr6 (122-189)||(26138441-26138508)
chr6 (137-189)||(18234089-18234141)
chr6 (200-235)||(17284325-17284360)
chr6 (3-80)||(24545748-24545825)
chr6 (33-85)||(4206107-4206159)
chr6 (130-176)||(17284304-17284350)
chr6 (137-189)||(18399903-18399955)
chr6 (5-70)||(19612876-19612942)
[»] chr2 (26 HSPs)
chr2 (3-235)||(20281776-20282004)
chr2 (3-122)||(11390957-11391076)
chr2 (3-122)||(11407618-11407737)
chr2 (88-235)||(19927141-19927283)
chr2 (88-235)||(32441604-32441747)
chr2 (129-235)||(24507057-24507163)
chr2 (129-235)||(16134429-16134535)
chr2 (122-220)||(25481139-25481237)
chr2 (122-220)||(25488745-25488843)
chr2 (7-85)||(41653749-41653827)
chr2 (175-235)||(11390900-11390960)
chr2 (175-235)||(11407561-11407621)
chr2 (137-228)||(29568738-29568829)
chr2 (129-229)||(44997964-44998064)
chr2 (3-64)||(32441480-32441541)
chr2 (129-229)||(23140219-23140319)
chr2 (129-229)||(23552009-23552109)
chr2 (7-71)||(21344625-21344689)
chr2 (3-58)||(23257148-23257202)
chr2 (3-72)||(23698944-23699013)
chr2 (7-83)||(21578-21654)
chr2 (137-189)||(15583542-15583594)
chr2 (12-100)||(19013172-19013261)
chr2 (3-58)||(20852019-20852073)
chr2 (3-48)||(24371578-24371623)
chr2 (160-228)||(25858916-25858984)
[»] chr1 (15 HSPs)
chr1 (3-235)||(17716476-17716704)
chr1 (3-235)||(52235987-52236215)
chr1 (3-235)||(16431292-16431520)
chr1 (3-235)||(48256036-48256264)
chr1 (76-235)||(26134714-26134868)
chr1 (129-235)||(44537988-44538094)
chr1 (122-228)||(8648595-8648701)
chr1 (5-72)||(13799590-13799657)
chr1 (122-229)||(20411988-20412095)
chr1 (137-189)||(30819335-30819387)
chr1 (3-95)||(23298749-23298842)
chr1 (122-189)||(39286865-39286931)
chr1 (14-95)||(26192128-26192209)
chr1 (3-71)||(20412141-20412210)
chr1 (3-52)||(28764012-28764061)
[»] scaffold0197 (1 HSPs)
scaffold0197 (3-235)||(8994-9222)
[»] chr4 (15 HSPs)
chr4 (3-235)||(31593618-31593846)
chr4 (40-235)||(11902777-11902969)
chr4 (3-169)||(13622109-13622270)
chr4 (129-235)||(45233934-45234040)
chr4 (129-235)||(45244503-45244609)
chr4 (7-235)||(3772323-3772548)
chr4 (129-235)||(15409777-15409883)
chr4 (133-235)||(21274978-21275080)
chr4 (129-235)||(24125459-24125564)
chr4 (3-205)||(10730908-10731106)
chr4 (3-205)||(10944677-10944875)
chr4 (181-231)||(13622068-13622118)
chr4 (137-228)||(11889249-11889340)
chr4 (133-189)||(38651916-38651972)
chr4 (5-71)||(11922589-11922656)
[»] scaffold0916 (1 HSPs)
scaffold0916 (3-235)||(3236-3464)
[»] scaffold0057 (1 HSPs)
scaffold0057 (3-235)||(20905-21132)
[»] scaffold0031 (2 HSPs)
scaffold0031 (76-235)||(23010-23164)
scaffold0031 (129-235)||(100115-100221)
[»] chr8 (10 HSPs)
chr8 (129-235)||(18161746-18161852)
chr8 (129-229)||(14351875-14351974)
chr8 (5-72)||(14162287-14162354)
chr8 (3-71)||(21139548-21139617)
chr8 (3-71)||(23221644-23221712)
chr8 (122-186)||(9998-10062)
chr8 (129-229)||(24967014-24967114)
chr8 (131-189)||(21319208-21319266)
chr8 (4-58)||(24221690-24221743)
chr8 (137-189)||(24341825-24341877)
[»] scaffold0251 (1 HSPs)
scaffold0251 (129-235)||(19181-19287)
[»] chr5 (10 HSPs)
chr5 (129-235)||(15059179-15059285)
chr5 (128-235)||(20967494-20967601)
chr5 (129-235)||(23343780-23343886)
chr5 (102-228)||(20104160-20104283)
chr5 (5-74)||(12410408-12410476)
chr5 (131-189)||(2953795-2953853)
chr5 (129-189)||(20738122-20738182)
chr5 (129-229)||(21273376-21273476)
chr5 (8-69)||(31758264-31758325)
chr5 (137-189)||(16676857-16676909)
[»] scaffold0371 (1 HSPs)
scaffold0371 (129-235)||(9328-9434)
[»] scaffold0471 (1 HSPs)
scaffold0471 (129-235)||(10047-10152)
[»] scaffold0058 (1 HSPs)
scaffold0058 (122-235)||(61595-61703)
[»] scaffold0096 (2 HSPs)
scaffold0096 (128-235)||(38210-38317)
scaffold0096 (122-157)||(38182-38217)
[»] scaffold0064 (1 HSPs)
scaffold0064 (129-235)||(48536-48642)
[»] scaffold0447 (2 HSPs)
scaffold0447 (76-217)||(6182-6318)
scaffold0447 (76-217)||(10796-10932)
[»] scaffold0383 (1 HSPs)
scaffold0383 (76-217)||(8791-8927)
[»] scaffold0213 (1 HSPs)
scaffold0213 (160-235)||(26721-26796)
[»] scaffold0012 (1 HSPs)
scaffold0012 (122-228)||(49622-49728)
[»] scaffold0360 (1 HSPs)
scaffold0360 (169-235)||(1-67)
[»] scaffold0092 (1 HSPs)
scaffold0092 (122-229)||(19763-19870)
[»] scaffold0098 (1 HSPs)
scaffold0098 (3-189)||(44414-44596)
[»] scaffold0011 (1 HSPs)
scaffold0011 (5-71)||(172620-172686)
[»] scaffold0334 (1 HSPs)
scaffold0334 (131-189)||(6978-7036)
[»] scaffold0362 (1 HSPs)
scaffold0362 (3-56)||(9296-9349)
[»] scaffold0168 (1 HSPs)
scaffold0168 (133-228)||(9117-9212)
[»] scaffold0264 (1 HSPs)
scaffold0264 (122-189)||(22653-22724)
[»] scaffold0001 (1 HSPs)
scaffold0001 (5-70)||(520634-520698)
[»] scaffold1225 (1 HSPs)
scaffold1225 (3-71)||(2214-2282)
[»] scaffold0084 (1 HSPs)
scaffold0084 (3-53)||(31553-31603)
[»] scaffold0231 (1 HSPs)
scaffold0231 (3-58)||(21217-21272)
[»] scaffold0014 (1 HSPs)
scaffold0014 (3-58)||(168090-168146)


Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 13434836 - 13434608
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  13434836 acatcactagaatgttccacaataaaccaagggcttataggtcagaaataaactaataggtagcttgtccgggaagcaaaagcagcaaaaggactaaagt 13434737  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttg 202  Q
    ||||||||||||||||||||||    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13434736 ggggcgcgcctcttgtatatat----ttgtacaagatcttcaaattctttgcacggaatatttttgtatgagatattcatatttttgtcttcaatccttg 13434641  T
Q  203 caccagatatttttgtataagatcttttatatt 235  Q
    |||||||||||||||||||||||||||||||||    
T  13434640 caccagatatttttgtataagatcttttatatt 13434608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 35964358 - 35964586
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    |||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  35964358 acatcactagaatgttccacaaaaaaccaagggcttttaggtcagaaataaactaataggcagcttgtccggaaagcaaaagcagcaaaaggactaaagt 35964457  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttg 202  Q
     ||||||||||||||    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| || ||||||| ||    
T  35964458 tgggcgcgcctcttg----tatatatttgtacaagatctttaaattctttgcacaggatatttttgtatgagatattcatatttttatcctcaatccgtg 35964553  T
Q  203 caccagatatttttgtataagatcttttatatt 235  Q
    |||||||||||||||||||||||||||||||||    
T  35964554 caccagatatttttgtataagatcttttatatt 35964586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 235
Target Start/End: Original strand, 16897408 - 16897630
Alignment:
Q  9 ctagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagtggggcg 108  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||| |||||     
T  16897408 ctagaatgttccacaagaaaccaagggcttttaggtcagaaataaactaataggtagcttgtccggaaagcaaaagcagcaaaaggaccaaag-ggggca 16897506  T
Q  109 cgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccag 208  Q
    ||||||||||     |||  ||||||||||| ||||||||| |||||||  |||||||||||||||||||||||||||||  | | |||||||||||||     
T  16897507 cgcctcttgt---cgtattattgtacaagattttcaaattccttgcacaatatatttttgtatgagatattcatattttttacatgaatccttgcaccaa 16897603  T
Q  209 atatttttgtataagatcttttatatt 235  Q
    || ||||||| ||||||||||||||||    
T  16897604 atgtttttgtgtaagatcttttatatt 16897630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 4307723 - 4307594
Alignment:
Q  102 tggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatcctt 201  Q
    |||||||||||||||    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  4307723 tggggcgcgcctctt----atatatatttgtacaagatcttcaaattctttgcacataatatttttgtatgagatattcatatttttgtcctcaatcctt 4307628  T
Q  202 gcaccagatatttttgtataagatcttttatatt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  4307627 gcaccagatatttttgtataagatcttttatatt 4307594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 33609667 - 33609439
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    ||||||||||||||||||| || |||||| |  ||| |||||| ||||||||||||||||||| |||||    || || ||||  |||| |||| ||||     
T  33609667 acatcactagaatgttccaaaagaaaccatgtgcttttaggtctgaaataaactaataggtagtttgtctttgaaacagaagcagcaaagggaccaaag- 33609569  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttg 202  Q
    ||||||||||||||||     |||  |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| | ||||||||||    
T  33609568 ggggcgcgcctcttgtcg---tattattgtacaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttgacatcaatccttg 33609472  T
Q  203 caccagatatttttgtataagatcttttatatt 235  Q
    |||||||||||||||| ||||||||||||||||    
T  33609471 caccagatatttttgtgtaagatcttttatatt 33609439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 16463427 - 16463569
Alignment:
Q  89 aaaaggactaaagtggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatattttt 188  Q
    |||||||||||||||||| || ||| |||||||    |||||||| ||||||||||||||||||||| || ||||||||| |||||||||||||||||||    
T  16463427 aaaaggactaaagtggggtgcacctgttgtata----tatttgtagaagatcttcaaattctttgcataggatatttttgcatgagatattcatattttt 16463522  T
Q  189 gtcttcaatccttgcaccagatatttttgtataagatcttttatatt 235  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||    
T  16463523 gtcctcaatccttgcaccagatatttttgtataagatcttttatatt 16463569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 76 - 235
Target Start/End: Original strand, 648976 - 649130
Alignment:
Q  76 aagcaaaagctacaaaaggactaaagtggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgaga 175  Q
    ||||||||||  |||||||||||||||||||| ||||||||    | |||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  648976 aagcaaaagcagcaaaaggactaaagtggggc-cgcctctt----aaatatgtttgtacaagatcttcaaattctttgcacatgatatttttgtatgaga 649070  T
Q  176 tattcatatttttgtcttcaatccttgcaccagatatttttgtataagatcttttatatt 235  Q
    |||||| |||||| || ||||||||||||||||||||||||||| |||||||||||||||    
T  649071 tattcaaatttttatcctcaatccttgcaccagatatttttgtacaagatcttttatatt 649130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 48355827 - 48355933
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48355827 ttgtacaagatcttcaaatcctttgcatagaatatttttgtatgagatattcatatttttgtcctcaatccttgcaccagatatttttgtataagatctt 48355926  T
Q  229 ttatatt 235  Q
    |||||||    
T  48355927 ttatatt 48355933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 15707478 - 15707584
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  15707478 ttgtacaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtgtaagacctt 15707577  T
Q  229 ttatatt 235  Q
    |||||||    
T  15707578 ttatatt 15707584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 33612471 - 33612612
Alignment:
Q  88 caaaaggactaaagtggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttt 187  Q
    ||||||||||||||| |||| ||||||||    | |||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||     
T  33612471 caaaaggactaaagtagggc-cgcctctt----aaatatatttgtacaagatcttcaaattctttgcacatgatatttt-gtatgagatattcatatttc 33612564  T
Q  188 tgtcttcaatccttgcaccagatatttttgtataagatcttttatatt 235  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  33612565 tgtcctcaatccttgcaccagatatttttgtataagatcttttatatt 33612612  T

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Target: chr7; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 4313137 - 4312964
Alignment:
Q  57 aataggtagcttgtccggaaagcaaaagctacaaaaggactaaagtggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcac 156  Q
    |||||||||||||||    ||||||||||  |||||||  || | ||||| |||||||||||||    ||||||||||||||||||||||||||||||||    
T  4313137 aataggtagcttgtctctgaagcaaaagcagcaaaaggg-tataatggggagcgcctcttgtat----atatttgtacaagatcttcaaattctttgcac 4313043  T
Q  157 agaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatcttttatatt 235  Q
    |  |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||| |||||    
T  4313042 atgatatttttgtatgagatattcatatttttgtcctcaatccttgcaccagataattttgtatgagatctttcatatt 4312964  T

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Target: chr7; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 10204521 - 10204415
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  10204521 ttgtacaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttttcctcaatccttgcaccatatatttttgtataagatctt 10204422  T
Q  229 ttatatt 235  Q
    |||||||    
T  10204421 ttatatt 10204415  T

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Target: chr7; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 14941967 - 14942073
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||    
T  14941967 ttgtacaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttgtcctcaatccttgcagcatatatttttgtataagatctt 14942066  T
Q  229 ttatatt 235  Q
    |||||||    
T  14942067 ttatatt 14942073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 15369560 - 15369666
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||    
T  15369560 ttgtacaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttgtcctcaatccttgcagcatatatttttgtataagatctt 15369659  T
Q  229 ttatatt 235  Q
    |||||||    
T  15369660 ttatatt 15369666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 129 - 233
Target Start/End: Original strand, 25181207 - 25181311
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  25181207 ttgtacaagatcttcaaattcttttcacaagatatttttgtatgagatattcatatttttgttctcaatccttgcaccagatatttttgtataagatctt 25181306  T
Q  229 ttata 233  Q
    |||||    
T  25181307 ttata 25181311  T

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Target: chr7; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 8880187 - 8880290
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtata 221  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||     
T  8880187 tatatgtttgtacaagatcttcaaattttttgcacaggatatttttgtatgagatattcatatttttgtcctcaatccttgcacatgatatttttgtatg 8880286  T
Q  222 agat 225  Q
    ||||    
T  8880287 agat 8880290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 9192621 - 9192548
Alignment:
Q  162 atttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatcttttatatt 235  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  9192621 atttttgtatgagatattcatatttttgtcctcaatccttgcatcagatatttttgtataagatcttttatatt 9192548  T

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Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 8880265 - 8880349
Alignment:
Q  151 ttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatcttttatatt 235  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||    
T  8880265 ttgcacatgatatttttgtatgagatattcatatttttgtcctcaatccttgcaccagatatttttgcataagaacttttatatt 8880349  T

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Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 217
Target Start/End: Original strand, 9194125 - 9194335
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaact-aataggtagcttgtccggaaagcaaaagctacaaaaggactaaag 101  Q
    ||||||||||||| |||||||| |||||| || ||| ||||||| || |||||| |||||||||||||||    ||||| ||||| |||||||   ||||    
T  9194125 acatcactagaatattccacaagaaaccatggtcttttaggtcataagtaaacttaataggtagcttgtctttgaagcagaagctgcaaaagggtaaaag 9194224  T
Q  102 tggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatcctt 201  Q
      ||| ||||| |||||   ||||| |||| |||||||||||||||||||| ||||  ||||||||||||||||| |||||||||||| | | |||||||    
T  9194225 --gggtgcgccacttgt---tatatttttgcacaagatcttcaaattctttacacaagatatttttgtatgagatcttcatatttttggcatgaatcctt 9194319  T
Q  202 gcaccagatatttttg 217  Q
    |||  | |||||||||    
T  9194320 gcagaatatatttttg 9194335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 1462427 - 1462304
Alignment:
Q  102 tggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatcctt 201  Q
    ||||||||||| |||||   ||||| |||||||||||||||| |||||||||||||  || |||||||||| ||| |||||||||||| | | |||||||    
T  1462427 tggggcgcgccacttgt---tatatttttgtacaagatcttctaattctttgcacaagatttttttgtatgggatcttcatatttttgacatgaatcctt 1462331  T
Q  202 gcaccagatatttttgtataagatctt 228  Q
    |||| |||||||||||||| |||||||    
T  1462330 gcacaagatatttttgtatgagatctt 1462304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 48713430 - 48713207
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaact-aataggtagcttgtccggaaagcaaaagctacaaaaggactaaag 101  Q
    ||||||||| |||||||||||| |||||| || ||| |||||||||| |||||| |||||||||||||||    ||||| ||||  |||||||   ||||    
T  48713430 acatcactataatgttccacaagaaaccatgggcttttaggtcagaagtaaacttaataggtagcttgtctttgaagcagaagcagcaaaagggtaaaag 48713331  T
Q  102 tggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatattttt-gtatgagatattcatatttttgtcttcaatcct 200  Q
      ||| ||| | |||||   ||||| |||| ||||||||||||||||||||| |||  |||||||| ||||||||| |||||||||||| | | ||||||    
T  48713330 --gggtgcggcacttgt---tatatttttgcacaagatcttcaaattctttgaacaatatattttttgtatgagatcttcatatttttggcatgaatcct 48713236  T
Q  201 tgcaccagatatttttgtataagatcttt 229  Q
    ||||| | ||||||||| || ||||||||    
T  48713235 tgcacaatatatttttgcatgagatcttt 48713207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 21005709 - 21005815
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtata 221  Q
    ||||| ||||||| ||||||||||||||||||||||  ||||||||||||||||| |||||| ||||  | | ||||||||||| ||||||||||||||     
T  21005709 tatatttttgtacgagatcttcaaattctttgcacaagatatttttgtatgagatcttcataatttttgcatgaatccttgcacaagatatttttgtatg 21005808  T
Q  222 agatctt 228  Q
    |||||||    
T  21005809 agatctt 21005815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 228
Target Start/End: Original strand, 19515618 - 19515717
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||| |||||||||||||||||||| |  ||||||| ||||||||| |||||||||||| | | |||| ||||||||||||||||||||| |||||||    
T  19515618 ttgtacgagatcttcaaattctttgcataagatattttggtatgagatcttcatatttttgacatgaatctttgcaccagatatttttgtatgagatctt 19515717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 5826002 - 5825929
Alignment:
Q  7 cactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagca 80  Q
    |||||||||||||||||| |||||| || ||| |||||||||| |||||||||||||||||||||||| |||||    
T  5826002 cactagaatgttccacaagaaaccatgggcttttaggtcagaagtaaactaataggtagcttgtccgggaagca 5825929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 9004464 - 9004364
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    ||||||||||||||||||||||||||| |  ||||||| ||||||||| |||||||||||| | | |||| |||||| | ||||||||| || |||||||    
T  9004464 ttgtacaagatcttcaaattctttgcataagatattttggtatgagatcttcatatttttggcatgaatctttgcacaatatatttttgcatgagatctt 9004365  T
Q  229 t 229  Q
    |    
T  9004364 t 9004364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 188
Target Start/End: Original strand, 6257763 - 6257829
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatattttt 188  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||||| |||| |||||||||||    
T  6257763 tatatttttgtacaagatcttcaaattctttgcacaagatatttttgtattagatcttcatattttt 6257829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 17206535 - 17206602
Alignment:
Q  5 atcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtcc 72  Q
    |||||||||||||||||||| |||||| || | | ||||||||||||||||||| |||||||||||||    
T  17206535 atcactagaatgttccacaagaaaccacgggcatttaggtcagaaataaactaacaggtagcttgtcc 17206602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 4461012 - 4461064
Alignment:
Q  137 gatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    |||||||||||||||||||||  |||||||||||| |||| ||||||||||||    
T  4461012 gatcttcaaattctttgcacaagatatttttgtataagatcttcatatttttg 4461064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 46274155 - 46274119
Alignment:
Q  199 cttgcaccagatatttttgtataagatcttttatatt 235  Q
    |||||||||||||||||||| ||||||||||||||||    
T  46274155 cttgcaccagatatttttgtgtaagatcttttatatt 46274119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 175; Significance: 2e-94; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 25054989 - 25054759
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    |||||||||||||||||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||    
T  25054989 acatcactagaatgttccacaagaaaccaagggcttctaggtcagaaataaacaaataggtagcttgtccggaaagcaaaagcagcaaaaggactaaagt 25054890  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttg 202  Q
    ||||||||||||||||||    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  25054889 ggggcgcgcctcttgtat----atatttgtacaagatcttcaaattctttgcacataatatttttgtatgagatattcatatttttgtcctcaatccttg 25054794  T
Q  203 caccagata--tttttgtataagatcttttatatt 235  Q
    |||||||||  ||||||||||||||||||||||||    
T  25054793 caccagatatttttttgtataagatcttttatatt 25054759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 11398843 - 11398616
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    |||| ||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  11398843 acattactagaatgttccacaagaaaccaagggcttttaggtcagaaataaactaataggtagcttgtccagaaagcaaaagcagcaaaaggactaaagt 11398744  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttg 202  Q
    ||||||||||||||||||    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| || ||||||||||    
T  11398743 ggggcgcgcctcttgtat----atatttgtacaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttttc-tcaatccttg 11398649  T
Q  203 caccagatatttttgtataagatcttttatatt 235  Q
    |||||| ||||||||||||||||||||||||||    
T  11398648 caccaggtatttttgtataagatcttttatatt 11398616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 36076148 - 36075921
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    |||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||||||||||||| |||||||||| |  |||||||||||||||    
T  36076148 acatcactagaatgttccacaagaaaccaagggcttttaggtaagaaataaactaataggtagcttgtccagaaagcaaaatcagcaaaaggactaaagt 36076049  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttg 202  Q
    ||| ||||||||||||||||||    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||    
T  36076048 ggg-cgcgcctcttgtatatat----ttgtacaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttgtcctcaatccttg 36075954  T
Q  203 caccagatatttttgtataagatcttttatatt 235  Q
    ||| |||||||||||||||||||||||||||||    
T  36075953 cactagatatttttgtataagatcttttatatt 36075921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 14495047 - 14495160
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtata 221  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14495047 tatatttttgtacaagatcttcaaattctttgcacaggatatttttgtatgagatattcatatttttgtcctcaatccttgcaccagatatttttgtata 14495146  T
Q  222 agatcttttatatt 235  Q
    ||||||||||||||    
T  14495147 agatcttttatatt 14495160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 14661022 - 14661128
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    ||||||||||||||||||||||| | |||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14661022 ttgtacaagatcttcaaattcttcgtacatgatatttttgtatgagatattcatatttttgtcctcaatccttgcaccagatatttttgtataagatctt 14661121  T
Q  229 ttatatt 235  Q
    |||||||    
T  14661122 ttatatt 14661128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 123 - 235
Target Start/End: Original strand, 3245284 - 3245396
Alignment:
Q  123 atatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataa 222  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| |||||||||| |||| | ||||||||||||    
T  3245284 atatatttgtacaagatcttcaaattctttgcatatgatatttttgtatgagatattcatatttttgtcctcaatccttgaaccatacatttttgtataa 3245383  T
Q  223 gatcttttatatt 235  Q
    |||||||||||||    
T  3245384 gatcttttatatt 3245396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 27407157 - 27407081
Alignment:
Q  7 cactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaa 83  Q
    |||||||||||||||||| |||||| || ||| |||||||||| |||||||||||||||||||||||| ||||||||    
T  27407157 cactagaatgttccacaagaaaccacgggcttttaggtcagaagtaaactaataggtagcttgtccgggaagcaaaa 27407081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 7908469 - 7908406
Alignment:
Q  7 cactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgt 70  Q
    |||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||    
T  7908469 cactagaatgttccacaagaaaccacggacttttaggtcagaaataaactaataggtagcttgt 7908406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 11827552 - 11827619
Alignment:
Q  5 atcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtcc 72  Q
    |||||||||||||| |||||||||||| || ||| |||||||||||||||||||||||||||||||||    
T  11827552 atcactagaatgtttcacaataaaccacgggcttttaggtcagaaataaactaataggtagcttgtcc 11827619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 17050690 - 17050615
Alignment:
Q  8 actagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaa 83  Q
    ||||||||||||||||| |||||| || ||| ||||| ||||||||||||||||||||||||||||| ||||||||    
T  17050690 actagaatgttccacaagaaaccacgggcttttaggttagaaataaactaataggtagcttgtccgggaagcaaaa 17050615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 17041678 - 17041605
Alignment:
Q  10 tagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaa 83  Q
    ||||||||||||||| |||||| || ||| ||||||||||||||||||||||||||||||| ||| ||||||||    
T  17041678 tagaatgttccacaagaaaccacgggcttttaggtcagaaataaactaataggtagcttgttcgggaagcaaaa 17041605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 13418335 - 13418268
Alignment:
Q  5 atcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtcc 72  Q
    |||||||||||||||||||| |||||| |  ||| |||||||||||||||||||||||||||||||||    
T  13418335 atcactagaatgttccacaagaaaccacgagcttttaggtcagaaataaactaataggtagcttgtcc 13418268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 42244687 - 42244754
Alignment:
Q  5 atcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtcc 72  Q
    |||||||||||||||||||| |||||| || ||| |||||||| ||||||||||||||||||||||||    
T  42244687 atcactagaatgttccacaagaaaccatgggcttttaggtcaggaataaactaataggtagcttgtcc 42244754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 3250366 - 3250420
Alignment:
Q  181 atatttttgtcttcaatccttgcaccagatatttttgtataagatcttttatatt 235  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  3250366 atatttttgtcctcaatccttgcaccatatatttttgtataagatcttttatatt 3250420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 14659266 - 14659197
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaact-aataggtagcttgtc 71  Q
    |||||||||||||||||||||| |||||| || ||| ||||||||||||||||| |||||||||||||||    
T  14659266 acatcactagaatgttccacaagaaaccacgggcttttaggtcagaaataaactaaataggtagcttgtc 14659197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 22038722 - 22038656
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    ||||| |||||||||||||| |||||||||||||||  ||||||||||||||||| ||||||||||||    
T  22038722 tatatttttgtacaagatctccaaattctttgcacaagatatttttgtatgagat-ttcatatttttg 22038656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 17209598 - 17209530
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtcc 72  Q
    |||||||||||||||||||||| || ||| || ||| |||||||||| ||||||||||||||||||||||    
T  17209598 acatcactagaatgttccacaagaa-ccatgggcttttaggtcagaagtaaactaataggtagcttgtcc 17209530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 19567257 - 19567357
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    ||||||||||||||| |||||||||||||  ||||||| |||| |||| || ||||||||| | | |||| |||||| | ||||||||| || |||||||    
T  19567257 ttgtacaagatcttcgaattctttgcacaagatattttggtatcagatcttaatatttttggcatgaatctttgcacaatatatttttgcatgagatctt 19567356  T
Q  229 t 229  Q
    |    
T  19567357 t 19567357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 34053879 - 34053931
Alignment:
Q  137 gatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  34053879 gatcttcaaattctttgcacaagatatttttgtatgagatcttcatatttttg 34053931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 169
Target Start/End: Original strand, 3250289 - 3250375
Alignment:
Q  78 gcaaaagctacaaaaggactaaagtggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgt 169  Q
    ||||||||  |||||||||||||||||||| |||||| |    | ||||||||||||||||||||||||||||||||| |  ||||||||||    
T  3250289 gcaaaagcagcaaaaggactaaagtggggc-cgcctcct----aaatatatttgtacaagatcttcaaattctttgcatatgatatttttgt 3250375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 13601586 - 13601521
Alignment:
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtat 171  Q
    |||||||||| |||||   ||||| |||| |||||||||||||||||||||||||  ||||||||||||    
T  13601586 ggggcgcgccacttgt---tatatttttgcacaagatcttcaaattctttgcacaagatatttttgtat 13601521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 17023072 - 17023014
Alignment:
Q  131 gtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    ||||||||||||| |||||||||||||  |||||||||| |||||| ||| ||||||||    
T  17023072 gtacaagatcttctaattctttgcacaagatatttttgtgtgagatcttcttatttttg 17023014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 11869973 - 11870065
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaact-aataggtagcttgtccggaaagcaaaagctacaaaagga 95  Q
    |||||| ||||||||||||||| |||| | || ||| ||||||||||||||||| || ||| ||||||||||  ||||||||||  ||||||||    
T  11869973 acatcaatagaatgttccacaagaaactatgggctt-taggtcagaaataaactaaacaggcagcttgtccgagaagcaaaagcagcaaaagga 11870065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 20225520 - 20225578
Alignment:
Q  131 gtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    ||||||||||||| ||||||||  |||  |||||||||| |||||| ||||||||||||    
T  20225520 gtacaagatcttctaattctttatacaagatatttttgtgtgagatcttcatatttttg 20225578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 25765981 - 25766050
Alignment:
Q  160 atatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatcttt 229  Q
    ||||||| ||||||||| |||||||||||| | | |||| |||||| | ||||||||| || ||||||||    
T  25765981 atattttggtatgagatcttcatatttttggcatgaatctttgcacaatatatttttgcatgagatcttt 25766050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 168; Significance: 4e-90; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 25963877 - 25963649
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    |||||||||||||||||||||| |||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  25963877 acatcactagaatgttccacaagaaactaagggcttttaggtcagaaataaactaataggtagcttgtccggaaagcaaaagcagcaaaaggactaaagt 25963778  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttg 202  Q
    || |||||||||||||||||||    |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||    
T  25963777 ggagcgcgcctcttgtatatat----ttgtacaatatcttcaaattctttgcacaagatatttttgtatgagatattcatatttttgtcctcaatccttg 25963682  T
Q  203 caccagatatttttgtataagatcttttatatt 235  Q
    ||| |||||||||||||||||||||||||||||    
T  25963681 cactagatatttttgtataagatcttttatatt 25963649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 25968524 - 25968296
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    |||||||||||||||||||||| |||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  25968524 acatcactagaatgttccacaagaaactaagggcttttaggtcagaaataaactaataggtagcttgtccggaaagcaaaagcagcaaaaggactaaagt 25968425  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttg 202  Q
    || |||||||||||||||||||    |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||    
T  25968424 ggagcgcgcctcttgtatatat----ttgtacaatatcttcaaattctttgcacaagatatttttgtatgagatattcatatttttgtcctcaatccttg 25968329  T
Q  203 caccagatatttttgtataagatcttttatatt 235  Q
    ||| |||||||||||||||||||||||||||||    
T  25968328 cactagatatttttgtataagatcttttatatt 25968296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 25949277 - 25949049
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    |||||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||||||||||||||||| |||||||||||  |||||||| ||||||    
T  25949277 acatcactagaatgttccacaagaaaccaagggcttttaggtaagaaataaactaataggtagcttgtccgaaaagcaaaagcagcaaaaggattaaagt 25949178  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttg 202  Q
    ||||||||||||||||||||||    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||  ||||||||||    
T  25949177 ggggcgcgcctcttgtatatat----ttgtacaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttgtgctcaatccttg 25949082  T
Q  203 caccagatatttttgtataagatcttttatatt 235  Q
    ||| |||||||||||||||||||||||||||||    
T  25949081 cactagatatttttgtataagatcttttatatt 25949049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 32543212 - 32542984
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    |||||||||| ||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||  ||||| |||||||||    
T  32543212 acatcactaggatgttccacaagaaaccaagggcttttaggtcagaaataaactaataggtagcttgtctggaaagcaaaagcagcaaaaagactaaagt 32543113  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttg 202  Q
     ||||||  |||||||||||||    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||    
T  32543112 agggcgcaactcttgtatatat----ttgtacaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttgtcctcaatccttg 32543017  T
Q  203 caccagatatttttgtataagatcttttatatt 235  Q
    |||||||||||||||| ||||||||||||||||    
T  32543016 caccagatatttttgtgtaagatcttttatatt 32542984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 5399073 - 5398967
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtata 221  Q
    ||||| ||||||||||||||||||||| ||||||||  ||||||||| ||||||| |||||||||||| | | |||| |||||| ||||||||||||||     
T  5399073 tatatttttgtacaagatcttcaaattatttgcacaagatatttttgcatgagatcttcatatttttggcatgaatcattgcacaagatatttttgtatg 5398974  T
Q  222 agatctt 228  Q
    |||||||    
T  5398973 agatctt 5398967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 228
Target Start/End: Complemental strand, 29253822 - 29253723
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||| | | |||| |||||||| |||||||||||  |||||||    
T  29253822 ttgtacaagatcttcaaattctttgcacaagatattttggtatgagatcttcatatttttgacatgaatctttgcaccatatatttttgtacgagatctt 29253723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 18993144 - 18993077
Alignment:
Q  5 atcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtcc 72  Q
    |||||||||||||||||||| |||||| || ||| |||||||||||||||||||||||||||||||||    
T  18993144 atcactagaatgttccacaagaaaccatgggcttttaggtcagaaataaactaataggtagcttgtcc 18993077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 20218609 - 20218681
Alignment:
Q  11 agaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaa 83  Q
    |||||||||||||| |||||| || ||| |||||||||| |||||||||||||||||||||||| ||||||||    
T  20218609 agaatgttccacaagaaaccacgggcttttaggtcagaagtaaactaataggtagcttgtccgggaagcaaaa 20218681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 22112634 - 22112706
Alignment:
Q  11 agaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaa 83  Q
    |||||||||||||| |||||| || ||| |||||||||| |||||||||||||||||||||||| ||||||||    
T  22112634 agaatgttccacaagaaaccacgggcttttaggtcagaagtaaactaataggtagcttgtccgggaagcaaaa 22112706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 23517585 - 23517652
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    ||||| || ||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  23517585 tatattttggtacaagatcttcaaattctttgcacaaaatatttttgtataagatcttcatatttttg 23517652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 25339385 - 25339452
Alignment:
Q  5 atcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtcc 72  Q
    |||||||||||||||||||| |||||| || ||| ||||||||||||||||||||||| |||||||||    
T  25339385 atcactagaatgttccacaagaaaccacgggcttttaggtcagaaataaactaataggcagcttgtcc 25339452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 25923523 - 25923600
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagca 80  Q
    |||||||||||||||||||||| ||||||    ||| ||||||||||||||||| ||||||||||||||||| |||||    
T  25923523 acatcactagaatgttccacaagaaaccacaagcttttaggtcagaaataaactgataggtagcttgtccgggaagca 25923600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 4740931 - 4740851
Alignment:
Q  5 atcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagc 85  Q
    |||||||||||||||||||| |||| | || ||| |||||||||| |||||||||||||||||||||| | ||||| ||||    
T  4740931 atcactagaatgttccacaagaaactacgggcttttaggtcagaagtaaactaataggtagcttgtccaggaagcagaagc 4740851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 29093511 - 29093443
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtc 71  Q
    |||||||||||||||||||||| ||||||  | ||| ||||||| ||||||||||||||||||||||||    
T  29093511 acatcactagaatgttccacaagaaaccacaggcttttaggtcaaaaataaactaataggtagcttgtc 29093443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 18627377 - 18627310
Alignment:
Q  5 atcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtcc 72  Q
    |||| ||||||||||||||| |||||| || ||| ||||||||||||||||||||| |||||||||||    
T  18627377 atcattagaatgttccacaaaaaaccatgggcttttaggtcagaaataaactaatacgtagcttgtcc 18627310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 23574910 - 23574977
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    ||||| || |||||||||||||||||||||||||||  |||||||||||| |||| ||||||||||||    
T  23574910 tatattttggtacaagatcttcaaattctttgcacaagatatttttgtataagatcttcatatttttg 23574977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 26017754 - 26017687
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    ||||| |||| |||||||||||||||||||||||||  |||||||||||| |||| ||||||||||||    
T  26017754 tatatttttgcacaagatcttcaaattctttgcacaagatatttttgtatcagatcttcatatttttg 26017687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 26157127 - 26157060
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    ||||| |||| |||||||||||||||||||||||||  |||||||||||| |||| ||||||||||||    
T  26157127 tatatttttgcacaagatcttcaaattctttgcacaagatatttttgtatcagatcttcatatttttg 26157060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 17739458 - 17739400
Alignment:
Q  131 gtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||| ||||||||||||    
T  17739458 gtacaagatcttcaatttctttgcacaagatatttttgtatgagatcttcatatttttg 17739400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 5949889 - 5949990
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatat-ttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatct 227  Q
    |||||||||||||||||||||||||||||  |||| ||| ||||||||| |||||||||||| | | |||| |||||| | || |||||| || ||||||    
T  5949889 ttgtacaagatcttcaaattctttgcacaagatatatttggtatgagatcttcatatttttggcatgaatctttgcacaatatttttttgcatgagatct 5949988  T
Q  228 tt 229  Q
    ||    
T  5949989 tt 5949990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 19993545 - 19993457
Alignment:
Q  5 atcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaag 93  Q
    |||||||||||||||||||| |||||| |  ||| |||||||||| |||||||| |||||||||||||   ||||| |||| |||||||    
T  19993545 atcactagaatgttccacaagaaaccacgagcttttaggtcagaagtaaactaacaggtagcttgtccttgaagcagaagcaacaaaag 19993457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 25507438 - 25507371
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    ||||| |||| |||||||||||||||||||||||||  |||||||| ||||| || ||||||||||||    
T  25507438 tatatttttgcacaagatcttcaaattctttgcacaatatatttttctatgatatcttcatatttttg 25507371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 26138508 - 26138441
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    ||||| |||| |||||||||||||||| ||||||||  |||||||||||| |||| ||||||||||||    
T  26138508 tatatttttgcacaagatcttcaaattatttgcacaagatatttttgtatcagatcttcatatttttg 26138441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 18234089 - 18234141
Alignment:
Q  137 gatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    |||||||||||||||||||||  ||||||||||||||||| ||| ||||||||    
T  18234089 gatcttcaaattctttgcacaagatatttttgtatgagatcttcgtatttttg 18234141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 17284325 - 17284360
Alignment:
Q  200 ttgcaccagatatttttgtataagatcttttatatt 235  Q
    ||||||||||||||||||||||||||||||||||||    
T  17284325 ttgcaccagatatttttgtataagatcttttatatt 17284360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 24545748 - 24545825
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagca 80  Q
    |||||||||||||||||||||| ||| ||  | ||| |||||||||| ||||| |||||||| |||||| || |||||    
T  24545748 acatcactagaatgttccacaagaaaacacaggcttttaggtcagaagtaaacgaataggtaacttgtctgggaagca 24545825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 4206159 - 4206107
Alignment:
Q  33 ggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagc 85  Q
    |||||| |||||||||| |||||||||||||||||||||| | ||||| ||||    
T  4206159 ggacttttaggtcagaagtaaactaataggtagcttgtccaggaagcagaagc 4206107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 17284304 - 17284350
Alignment:
Q  130 tgtacaagatcttcaaattctttgcacagaatatttttgtatgagat 176  Q
    |||||||||||||||||||||||||||   |||||||||||| ||||    
T  17284304 tgtacaagatcttcaaattctttgcaccagatatttttgtataagat 17284350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 18399903 - 18399955
Alignment:
Q  137 gatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    ||||| ||| |||||||||||  |||||||||||| |||| ||||||||||||    
T  18399903 gatctacaatttctttgcacaagatatttttgtattagatcttcatatttttg 18399955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 19612876 - 19612942
Alignment:
Q  5 atcactagaatgttccacaataaaccaaggacttataggtcagaaataaact--aataggtagcttgt 70  Q
    |||| ||||||||||||||| |||||| || ||| |||||||||||||||||  ||||||| ||||||    
T  19612876 atcaatagaatgttccacaagaaaccatgggctt-taggtcagaaataaactgaaataggtggcttgt 19612942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 168; Significance: 4e-90; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 20282004 - 20281776
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    |||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  20282004 acatcactagaatgttccacaagaaaccaagggcttttaggtcagaaataaactaataggtagcttgtccggaaagcaaaagcagcaaaaggactaaagt 20281905  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttg 202  Q
    ||| ||| ||||||||||||||    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||    
T  20281904 gggacgcacctcttgtatatat----ttgtaaaagatcttcaaattctttgcacaggatatttttgtatgagatattcatatttttgtccttaatccttg 20281809  T
Q  203 caccagatatttttgtataagatcttttatatt 235  Q
    ||||||||||||||||||||||| |||||||||    
T  20281808 caccagatatttttgtataagatgttttatatt 20281776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 11391076 - 11390957
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||    
T  11391076 acatcactagaatgttccacaagaaaccaaggacttttaggtcagaaataaactaataggtagcttgtccgaaaagcaaaagcagcaaaaggactaaagt 11390977  T
Q  103 ggggcgcgcctcttgtatat 122  Q
    ||||||||||||||||||||    
T  11390976 ggggcgcgcctcttgtatat 11390957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 11407737 - 11407618
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||    
T  11407737 acatcactagaatgttccacaagaaaccaaggacttttaggtcagaaataaactaataggtagcttgtccgaaaagcaaaagcagcaaaaggactaaagt 11407638  T
Q  103 ggggcgcgcctcttgtatat 122  Q
    ||||||||||||||||||||    
T  11407637 ggggcgcgcctcttgtatat 11407618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 88 - 235
Target Start/End: Complemental strand, 19927283 - 19927141
Alignment:
Q  88 caaaaggactaaagtggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttt 187  Q
    ||||||||||||||||||||  |||||||    | |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||    
T  19927283 caaaaggactaaagtggggct-gcctctt----aaatatatttgtacaagatcttcaaattctttgcgcaggatatttttgtatgagatattgatatttt 19927189  T
Q  188 tgtcttcaatccttgcaccagatatttttgtataagatcttttatatt 235  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  19927188 tgtcctcaatccttgcaccagatatttttgtataagatcttttatatt 19927141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 32441604 - 32441747
Alignment:
Q  88 caaaaggactaaagtggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttt 187  Q
    |||||||||||||||| ||| |||||||||||||    ||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| |    
T  32441604 caaaaggactaaagtgcggcacgcctcttgtata----tatttgtacaagatcttcaaattctttgcacaagatatttttgtatgagatatttatattct 32441699  T
Q  188 tgtcttcaatccttgcaccagatatttttgtataagatcttttatatt 235  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  32441700 tgtcctcaatccttgcaccagatatttttctataagatcttttatatt 32441747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 24507163 - 24507057
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  24507163 ttgtacaagatcttcaaattctttgcacaagatatttttgtatgagatattcatatttttgtcctcaatccttccaccagatatttttgtataagatctt 24507064  T
Q  229 ttatatt 235  Q
    |||||||    
T  24507063 ttatatt 24507057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 16134429 - 16134535
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||| ||||||||||||||||||||  |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  16134429 ttgtacaatatcttcaaattctttgcacatgatatttttgtatgagatatttatatttttgtcctcaatccttgcaccatatatttttgtataagatctt 16134528  T
Q  229 ttatatt 235  Q
    |||||||    
T  16134529 ttatatt 16134535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 122 - 220
Target Start/End: Complemental strand, 25481237 - 25481139
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtat 220  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25481237 tatatttttgtacaagatcttcaaattctttgcacaagatatttttgtatgagatattcatatttttgtcctcaatccttgcaccagatatttttgtat 25481139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 122 - 220
Target Start/End: Complemental strand, 25488843 - 25488745
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtat 220  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25488843 tatatttttgtacaagatcttcaaattctttgcacaagatatttttgtatgagatattcatatttttgtcctcaatccttgcaccagatatttttgtat 25488745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 41653749 - 41653827
Alignment:
Q  7 cactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagc 85  Q
    |||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  41653749 cactagaatgttccacaagaaaccacggacttttaggtcagaaataaactaataggtagcttgtccgggaagcaaaagc 41653827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 11390960 - 11390900
Alignment:
Q  175 atattcatatttttgtcttcaatccttgcaccagatatttttgtataagatcttttatatt 235  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  11390960 atattcatatttttgtcctcaatccttgcaccaaatatttttgtataagatcttttatatt 11390900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 11407621 - 11407561
Alignment:
Q  175 atattcatatttttgtcttcaatccttgcaccagatatttttgtataagatcttttatatt 235  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  11407621 atattcatatttttgtcctcaatccttgcaccaaatatttttgtataagatcttttatatt 11407561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 228
Target Start/End: Original strand, 29568738 - 29568829
Alignment:
Q  137 gatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||  ||||||||||||||||| |||||||||||| | | ||| ||||||| |||||||||| ||| |||||||    
T  29568738 gatcttcaaattctttgcacaagatatttttgtatgagatcttcatatttttggcatgaattcttgcacaagatatttttatatgagatctt 29568829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 44998064 - 44997964
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||| | | |||  |||||| | ||||||||| || |||||||    
T  44998064 ttgtacaagatcttcaaattctttgcacaagatattttggtatgagatcttcatatttttggcatgaatttttgcacaatatatttttgcatgagatctt 44997965  T
Q  229 t 229  Q
    |    
T  44997964 t 44997964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 32441480 - 32441541
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggta 64  Q
    |||||||||||||||||||||| ||||||||| ||| |||||||||| ||||||||||||||    
T  32441480 acatcactagaatgttccacaaaaaaccaagggcttttaggtcagaactaaactaataggta 32441541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 23140219 - 23140319
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    ||||||||||||||| |||||||||||||  |||||||  |||||||| |||||||||||| | | |||| |||||| | ||||||||| || |||||||    
T  23140219 ttgtacaagatcttcgaattctttgcacaagatattttgttatgagatcttcatatttttggcatgaatctttgcacaatatatttttgcatgagatctt 23140318  T
Q  229 t 229  Q
    |    
T  23140319 t 23140319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 23552009 - 23552109
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    ||||||||||||||| |||||||||||||  |||||||  |||||||| |||||||||||| | | |||| |||||| | ||||||||| || |||||||    
T  23552009 ttgtacaagatcttcgaattctttgcacaagatattttgttatgagatcttcatatttttggcatgaatctttgcacaatatatttttgcatgagatctt 23552108  T
Q  229 t 229  Q
    |    
T  23552109 t 23552109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 21344625 - 21344689
Alignment:
Q  7 cactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtc 71  Q
    |||||||||||||||||| |||| | || ||| ||| |||||||||||||||||| |||||||||    
T  21344625 cactagaatgttccacaagaaactacgggcttttagatcagaaataaactaatagctagcttgtc 21344689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 23257148 - 23257202
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaa 58  Q
    |||||| ||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  23257148 acatcaatagaatgttccacaagaaaccatggactt-taggtcagaaataaactaa 23257202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 23698944 - 23699013
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtcc 72  Q
    |||||||||||||||| || || || ||| || ||| |||| ||||| ||||||||||||||||||||||    
T  23698944 acatcactagaatgtttcataagaagccatgggcttttaggccagaagtaaactaataggtagcttgtcc 23699013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 21578 - 21654
Alignment:
Q  7 cactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaa 83  Q
    ||||||||||||| |||| |||| | || ||| ||| |||||||||||||||||| || |||||| || ||||||||    
T  21578 cactagaatgttcgacaagaaactacgggcttttagatcagaaataaactaatagctaacttgtctgggaagcaaaa 21654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 15583594 - 15583542
Alignment:
Q  137 gatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    |||||||||||||||||| ||  |||||||||||| |||| ||||||||||||    
T  15583594 gatcttcaaattctttgcgcaagatatttttgtataagatcttcatatttttg 15583542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 19013172 - 19013261
Alignment:
Q  12 gaatgttccacaataaaccaaggacttataggtcagaaataaact--aataggtagcttgtccggaaagcaaaagctacaaaaggactaaa 100  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||  |||||| ||||||||    |||||||| | ||||||||| ||||    
T  19013172 gaatgttccacaagaaaccatggactt-taggtcagaaataaactaaaataggcagcttgtcaaagaagcaaaaacaacaaaaggagtaaa 19013261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 20852073 - 20852019
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaa 58  Q
    |||||| ||||||||||||||| |||||| || ||| |||||||||||||||||||    
T  20852073 acatcaatagaatgttccacaagaaaccatgggctt-taggtcagaaataaactaa 20852019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 24371578 - 24371623
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcaga 48  Q
    |||||| ||||||||||||||| |||||| |||||| |||||||||    
T  24371578 acatcaatagaatgttccacaagaaaccatggacttttaggtcaga 24371623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 25858916 - 25858984
Alignment:
Q  160 atatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    ||||||||||||||||| ||||||||||||   | |||||||| |  ||||| |||||||| |||||||    
T  25858916 atatttttgtatgagatcttcatatttttgaaatgaatccttgtagaagatagttttgtatgagatctt 25858984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 168; Significance: 4e-90; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 17716704 - 17716476
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    |||||||||||||| ||||||| || |||||| ||| ||||||||||||||||||||||||||||||| || |||||||||||  |||||||||||||||    
T  17716704 acatcactagaatggtccacaagaagccaagggcttttaggtcagaaataaactaataggtagcttgtacgaaaagcaaaagcagcaaaaggactaaagt 17716605  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttg 202  Q
    ||||||||||||||||||||||    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  17716604 ggggcgcgcctcttgtatatat----ttgtacaagatcttcaaattctttgcacaggatatttttgtatgagatattcatatttttgtcctcaatccttg 17716509  T
Q  203 caccagatatttttgtataagatcttttatatt 235  Q
    ||||| |||||||||||||||||||||||||||    
T  17716508 caccatatatttttgtataagatcttttatatt 17716476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 52235987 - 52236215
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    |||||||||||||||||||||| ||||||||  ||| ||| |||||||||||||||||||||| ||||| |||||||||||||  |||||||||||||||    
T  52235987 acatcactagaatgttccacaagaaaccaagagcttttagatcagaaataaactaataggtagtttgtctggaaagcaaaagcagcaaaaggactaaagt 52236086  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttg 202  Q
     ||||||||||||||||||    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  52236087 tgggcgcgcctcttgtata----tatttgtacaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttgtcttcaatccttg 52236182  T
Q  203 caccagatatttttgtataagatcttttatatt 235  Q
    ||||| |||||||||||||||||||||||||||    
T  52236183 caccaaatatttttgtataagatcttttatatt 52236215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 16431520 - 16431292
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    |||||||||||||||||||||| ||||||| | ||| |||||||||||||||||||||||||||||||| |||||||||||||  ||||| |||||||||    
T  16431520 acatcactagaatgttccacaagaaaccaatggcttttaggtcagaaataaactaataggtagcttgtctggaaagcaaaagcagcaaaaagactaaagt 16431421  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttg 202  Q
     |||||||||||||||||||||    |||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||| ||||||||||    
T  16431420 agggcgcgcctcttgtatatat----ttgtacaagatcttcaaattctttgcacatgatatttttgtatgaaatattcatatttttgtcctcaatccttg 16431325  T
Q  203 caccagatatttttgtataagatcttttatatt 235  Q
    ||||| |||||||||||||||||||||||||||    
T  16431324 caccatatatttttgtataagatcttttatatt 16431292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 48256264 - 48256036
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    ||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||||||||||||| |||||||  |||||  ||||| |||||||||    
T  48256264 acatcactagaatgttccataagaaaccaagggcttttaggtcagaaataaactaataggtagcttgttcggaaagttaaagcagcaaaaagactaaagt 48256165  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttg 202  Q
    |||||||||||||||| |||||    ||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||    
T  48256164 ggggcgcgcctcttgtgtatat----ttgtacaagttcttcaaattctttgcacatgatatttttgtatgagatattcatatttttgtcctcaatccttg 48256069  T
Q  203 caccagatatttttgtataagatcttttatatt 235  Q
    |||||||||||||||||||||||||||||||||    
T  48256068 caccagatatttttgtataagatcttttatatt 48256036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 76 - 235
Target Start/End: Original strand, 26134714 - 26134868
Alignment:
Q  76 aagcaaaagctacaaaaggactaaagtggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgaga 175  Q
    |||||||||| ||||||| | ||||||||||| ||||||    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26134714 aagcaaaagcaacaaaagaattaaagtggggc-cgcctc----ataaatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgaga 26134808  T
Q  176 tattcatatttttgtcttcaatccttgcaccagatatttttgtataagatcttttatatt 235  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  26134809 tattcatatttttgtcctcaatccttgcaccggatgtttttgtataagatcttttatatt 26134868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 44538094 - 44537988
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44538094 ttgtacaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttgtcctcaatccttgcaccagatatttttgtataagatctt 44537995  T
Q  229 ttatatt 235  Q
    |||||||    
T  44537994 ttatatt 44537988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 8648701 - 8648595
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtata 221  Q
    ||||| |||| |||||||||||||||||||||||||  ||||||||| ||||||| |||||||||||| | | |||| |||||| | ||||||||| ||     
T  8648701 tatatttttgcacaagatcttcaaattctttgcacaatatatttttgcatgagatcttcatatttttggcatgaatcattgcacaatatatttttgcatg 8648602  T
Q  222 agatctt 228  Q
    |||||||    
T  8648601 agatctt 8648595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 13799590 - 13799657
Alignment:
Q  5 atcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtcc 72  Q
    |||||||||||||||||||| |||||| || ||| |||||||| ||||||||||||||||||||||||    
T  13799590 atcactagaatgttccacaagaaaccatgggcttttaggtcaggaataaactaataggtagcttgtcc 13799657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 20412095 - 20411988
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtata 221  Q
    ||||| |||| ||||||||||||| ||||||||||   ||||||||||||||||| |||||||||||  | | ||||||||||| | ||||||||| ||     
T  20412095 tatatttttgcacaagatcttcaatttctttgcaccagatatttttgtatgagatcttcatattttttgcatgaatccttgcacaatatatttttgcatg 20411996  T
Q  222 agatcttt 229  Q
    ||||||||    
T  20411995 agatcttt 20411988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 30819335 - 30819387
Alignment:
Q  137 gatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    ||||||||| |||||||||||  |||||||||||| |||| ||||||||||||    
T  30819335 gatcttcaatttctttgcacaatatatttttgtataagatcttcatatttttg 30819387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 23298842 - 23298749
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaa--taggtagcttgtccggaaagcaaaagctacaaaagga 95  Q
    |||||| || |||||||||||| |||||| || ||| |||||||||||||||||||  |||||||||| || |  ||||||||||  ||||||||    
T  23298842 acatcaataaaatgttccacaaaaaaccatgggctt-taggtcagaaataaactaaattaggtagcttttcggagaagcaaaagcagcaaaagga 23298749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 39286865 - 39286931
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    ||||| |||| ||||||||| |||||||||||||||  || |||||| ||||||| ||||||||||||    
T  39286865 tatatttttgcacaagatctccaaattctttgcacaatat-tttttgcatgagatcttcatatttttg 39286931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 26192209 - 26192128
Alignment:
Q  14 atgttccacaataaaccaaggacttataggtcagaaataaact-aataggtagcttgtccggaaagcaaaagctacaaaagga 95  Q
    |||||| |||| |||||| |||||| ||||||||||||||||| || ||| ||||||||||  |||||||| | |||||||||    
T  26192209 atgttctacaagaaaccatggactt-taggtcagaaataaactaaacaggaagcttgtccgagaagcaaaaacaacaaaagga 26192128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 20412210 - 20412141
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaac-taataggtagcttgtc 71  Q
    |||||||||||||||||||||| ||||||  | | | ||||||| || ||||| ||||||||||||||||    
T  20412210 acatcactagaatgttccacaagaaaccattggcatttaggtcataagtaaacttaataggtagcttgtc 20412141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 28764012 - 28764061
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaata 52  Q
    ||||||||| |||||||||||| |||||| || ||| |||||||||||||    
T  28764012 acatcactataatgttccacaagaaaccacgggcttttaggtcagaaata 28764061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 8994 - 9222
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    |||||||||||||||||||||| ||||||||   || ||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||    
T  8994 acatcactagaatgttccacaagaaaccaagagtttttaggtcagaaataaactaataggtagcttgttcggaaagcaaaagcagcaaaaggactaaagt 9093  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttg 202  Q
    ||||||| ||||||||||||||    ||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||    
T  9094 ggggcgcacctcttgtatatat----ttgaacaagatcttcaaattctttgcacattatatttttgtatgagatattcatatttttgtcctcaatccttg 9189  T
Q  203 caccagatatttttgtataagatcttttatatt 235  Q
    |||||||||||||||||||||||||||||||||    
T  9190 caccagatatttttgtataagatcttttatatt 9222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 164; Significance: 9e-88; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 31593846 - 31593618
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    |||||||||||||||||||||| ||||||||| ||| ||||||||||||||| |||||| |||||||||  ||||||||||||  |||||||||||||||    
T  31593846 acatcactagaatgttccacaagaaaccaagggcttttaggtcagaaataaattaatagttagcttgtctagaaagcaaaagcagcaaaaggactaaagt 31593747  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttg 202  Q
    ||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31593746 ggggcgcgcctcttgtatatat----ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcctcaatccttg 31593651  T
Q  203 caccagatatttttgtataagatcttttatatt 235  Q
    || ||||||||||||| ||||||||||| ||||    
T  31593650 catcagatatttttgtttaagatcttttttatt 31593618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 40 - 235
Target Start/End: Original strand, 11902777 - 11902969
Alignment:
Q  40 taggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaa-ggactaaagtggggcgcgcctcttgtatatatatatttgtacaaga 138  Q
    |||||||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||||||| | | ||||||||||||||    | ||||||||    
T  11902777 taggtcagaaataaactaataggtagcttgtctggaaagcaaaagcagcaaaaaggactaaagtgggacacacctcttgtatatat----tggtacaaga 11902872  T
Q  139 tcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatcttttatatt 235  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11902873 tcttcaaattctttgcacaagatatttttgtatgagatattcatatttttgtcctcaatccttgcaccagatatttttgtataagatcttttatatt 11902969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 13622270 - 13622109
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    |||||||||||||||||||||| ||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||    
T  13622270 acatcactagaatgttccacaagaaatcaagggcttttaggtcagaaataaactaatag-tagcttgtccggaaagcaaaagcaccaaaaggactaaagt 13622172  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgt 169  Q
    ||||||||||||||||||    |||||||||||||||||||||||||||||||||  ||||||||||    
T  13622171 ggggcgcgcctcttgtat----atatttgtacaagatcttcaaattctttgcacatgatatttttgt 13622109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 45233934 - 45234040
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45233934 ttgtacaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttgtcctcaatccttgcaccagatatttttgtataagatctt 45234033  T
Q  229 ttatatt 235  Q
    |||||||    
T  45234034 ttatatt 45234040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 45244503 - 45244609
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45244503 ttgtacaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttgtcctcaatccttgcaccagatatttttgtataagatctt 45244602  T
Q  229 ttatatt 235  Q
    |||||||    
T  45244603 ttatatt 45244609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 235
Target Start/End: Original strand, 3772323 - 3772548
Alignment:
Q  7 cactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagtgggg 106  Q
    ||||| |||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||   ||||||||||   ||||||||| |||  ||||    
T  3772323 cactacaatgttccacaagaaaccaaagacttttaggtcagaaataaactaataggtagcttgtctaaaaagcaaaagtagcaaaaggaccaaaa-gggg 3772421  T
Q  107 cgcgcctcttgta-tatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcac 205  Q
     || ||||||||  ||| |||  |||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||  | | |||||||||||    
T  3772422 tgcacctcttgtcgtat-tattattgtacaagatcttcaaattctttgcacattatatttttgtatgagatattcatatgttttacatgaatccttgcac 3772520  T
Q  206 cagatatttttgtataagatcttttatatt 235  Q
    |||  || ||||| ||||||||||||||||    
T  3772521 cag--atgtttgtgtaagatcttttatatt 3772548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 15409883 - 15409777
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  15409883 ttgtacaagatcttcaaactctttgcacatgatatttttgtatgagatattcatatttttgtcctcaatccttgcaccagatatttttgtgtaagatctt 15409784  T
Q  229 ttatatt 235  Q
    |||||||    
T  15409783 ttatatt 15409777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 133 - 235
Target Start/End: Complemental strand, 21275080 - 21274978
Alignment:
Q  133 acaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatcttttat 232  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  21275080 acaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttgtcctcaatccttgcaccaaatatttctgtataagatcttttat 21274981  T
Q  233 att 235  Q
    |||    
T  21274980 att 21274978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 24125459 - 24125564
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  24125459 ttgtacaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttgtcctcaatcattgcacca-atatttttgtataagatctt 24125557  T
Q  229 ttatatt 235  Q
    |||||||    
T  24125558 ttatatt 24125564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 10731106 - 10730908
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaact-aataggtagcttgtccgga-aagcaaaagctacaaaaggactaaa 100  Q
    |||||| ||||||||||||||| ||| || || ||| |||||||||| |||||| |||||||||||||||     ||||| ||||  |||||||  ||||    
T  10731106 acatcattagaatgttccacaagaaatcatgggcttttaggtcagaagtaaacttaataggtagcttgtcttttgaagcagaagcagcaaaagg--taaa 10731009  T
Q  101 gtggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatcct 200  Q
      ||||| |||| |||||   ||||| |||| |||||||||| |||||||||||| |  ||||||||||||||||| |||||||||||| | | ||||||    
T  10731008 a-ggggcacgccacttgt---tatatttttgcacaagatctttaaattctttgcataagatatttttgtatgagatcttcatatttttggcatgaatcct 10730913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 10944875 - 10944677
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaact-aataggtagcttgtccgga-aagcaaaagctacaaaaggactaaa 100  Q
    |||||| ||||||||||||||| ||| || || ||| |||||||||| |||||| |||||||||||||||     ||||| ||||  |||||||  ||||    
T  10944875 acatcattagaatgttccacaagaaatcatgggcttttaggtcagaagtaaacttaataggtagcttgtcttttgaagcagaagcagcaaaagg--taaa 10944778  T
Q  101 gtggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatcct 200  Q
      ||||| |||| |||||   ||||| |||| |||||||||| |||||||||||| |  ||||||||||||||||| |||||||||||| | | ||||||    
T  10944777 a-ggggcacgccacttgt---tatatttttgcacaagatctttaaattctttgcataagatatttttgtatgagatcttcatatttttggcatgaatcct 10944682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 13622118 - 13622068
Alignment:
Q  181 atatttttgtcttcaatccttgcaccagatatttttgtataagatctttta 231  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13622118 atatttttgtcctcaatccttgcaccagatatttttgtataagatctttta 13622068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 228
Target Start/End: Original strand, 11889249 - 11889340
Alignment:
Q  137 gatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    ||||||||||||||||||| |  ||||||| ||||||||| ||||||||||||  || |||| |||||  | |||||||| ||| |||||||    
T  11889249 gatcttcaaattctttgcagaagatattttggtatgagatcttcatatttttgggttgaatctttgcataatatatttttatatgagatctt 11889340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 38651972 - 38651916
Alignment:
Q  133 acaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    ||||||||||| |||||||||||||  |||||||||||| |||| || |||||||||    
T  38651972 acaagatcttccaattctttgcacaagatatttttgtataagatcttaatatttttg 38651916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 11922589 - 11922656
Alignment:
Q  5 atcactagaatgttccacaataaaccaaggacttataggtcagaaataaact--aataggtagcttgtc 71  Q
    ||||||| | |||| ||||| ||||||||| ||| |||||||||||||||||  |||||||||||||||    
T  11922589 atcactaaagtgttgcacaagaaaccaagggctt-taggtcagaaataaactaaaataggtagcttgtc 11922656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 3464 - 3236
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    ||||||||||||||||||| || ||||||||  ||| |||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||    
T  3464 acatcactagaatgttccaaaagaaaccaagcgcttttaggtcagaaataaactaatagatagcttgtccggaaagcaaaagcagcaaaaggactaaagt 3365  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttg 202  Q
    ||||||||||||||||||||||    |||||||||||||||||||||||||||||  |||||||||| ||| ||||||||||||||||| ||||||||||    
T  3364 ggggcgcgcctcttgtatatat----ttgtacaagatcttcaaattctttgcacatgatatttttgtgtgatatattcatatttttgtcatcaatccttg 3269  T
Q  203 caccagatatttttgtataagatcttttatatt 235  Q
    ||||||||||||||||||| |||||||||||||    
T  3268 caccagatatttttgtatatgatcttttatatt 3236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 21132 - 20905
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccggaaagcaaaagctacaaaaggactaaagt 102  Q
    |||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||||||||||||| |||||||||| |  ||||||| |||||||    
T  21132 acatcactagaatgttccacaagaaaccaagg-cttttaggttagaaataaactaataggtagcttgtccagaaagcaaaatcagcaaaagggctaaagt 21034  T
Q  103 ggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttg 202  Q
    ||||| | ||||||||||||||    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||    
T  21033 ggggcacacctcttgtatatat----ttgtacaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttgtcctcaatccttg 20938  T
Q  203 caccagatatttttgtataagatcttttatatt 235  Q
    |||||||||||||||||||||||||||||||||    
T  20937 caccagatatttttgtataagatcttttatatt 20905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 76 - 235
Target Start/End: Complemental strand, 23164 - 23010
Alignment:
Q  76 aagcaaaagctacaaaaggactaaagtggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgaga 175  Q
    ||||||||||  |||||||||||||||||||| ||||||||    | || ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  23164 aagcaaaagcagcaaaaggactaaagtggggc-cgcctctt----aaatgtatttgtacaagatcttcaaattctttgcacatgatatttttgtatgaga 23070  T
Q  176 tattcatatttttgtcttcaatccttgcaccagatatttttgtataagatcttttatatt 235  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  23069 tattcatattttcgtcctcaatccttgcaccagatatttttgtataagatcttttatatt 23010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 100221 - 100115
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  100221 ttgtacaagatcttcaaattctttgcacattatatttttgtatgacatattcatatttttgtcctcaatccttgcaccagatatttttgtgtaagatctt 100122  T
Q  229 ttatatt 235  Q
    |||||||    
T  100121 ttatatt 100115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 1e-46; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 18161852 - 18161746
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18161852 ttgtacaagatcttcaaattctttgcacaagatatttttgtatgagatattcatatttttgtcctcaatccttgcaccagatatttttgtataagatctt 18161753  T
Q  229 ttatatt 235  Q
    |||||||    
T  18161752 ttatatt 18161746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 14351875 - 14351974
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||| ||| |||| |||||| | || |||||| ||||||||||    
T  14351875 ttgtacaagatcttcaaattctttgcacaagatattttggtatgagatcttcatatttttggcttgaatctttgcacaatat-tttttgcataagatctt 14351973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 14162287 - 14162354
Alignment:
Q  5 atcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtcc 72  Q
    |||||||||||||||||||| |||||| || ||| |||||||| ||||||||||||||||||||||||    
T  14162287 atcactagaatgttccacaagaaaccatgggcttttaggtcaggaataaactaataggtagcttgtcc 14162354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 21139617 - 21139548
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaact-aataggtagcttgtc 71  Q
    |||||||||||||||||||||| |||||| |||||| ||||||||||||||||| ||||| |||||||||    
T  21139617 acatcactagaatgttccacaagaaaccatggacttttaggtcagaaataaactaaatagatagcttgtc 21139548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 23221644 - 23221712
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtc 71  Q
    |||||||||||||||||||||  |||||| || ||| |||||||||||||||| |||||||||||||||    
T  23221644 acatcactagaatgttccacatgaaaccatgggcttttaggtcagaaataaacaaataggtagcttgtc 23221712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 9998 - 10062
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatattt 186  Q
    ||||| |||| |||||||||||||||||||||||||  ||||||||| ||||||| |||||||||    
T  9998 tatatttttgcacaagatcttcaaattctttgcacaatatatttttgcatgagatcttcatattt 10062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 24967114 - 24967014
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||||||||  ||||||| |||||| || |||||||||||  | | |||| |||||  | ||||||||| || |||||||    
T  24967114 ttgtacaagatcttcaaattctttgcacaagatattttagtatgatatcttcatattttttgcatgaatctttgcaaaatatatttttgcatgagatctt 24967015  T
Q  229 t 229  Q
    |    
T  24967014 t 24967014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 21319266 - 21319208
Alignment:
Q  131 gtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    |||||| ||||| || |||||||||||  ||||||||||||||||| ||||||||||||    
T  21319266 gtacaacatctttaatttctttgcacaagatatttttgtatgagatcttcatatttttg 21319208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 24221690 - 24221743
Alignment:
Q  4 catcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaa 58  Q
    ||||| ||||||||||||||| |||||| || ||| |||||||||||||||||||    
T  24221690 catcaatagaatgttccacaagaaaccatgggctt-taggtcagaaataaactaa 24221743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 24341877 - 24341825
Alignment:
Q  137 gatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    |||||||||| | ||||||||  |||||||||||| |||| ||||||||||||    
T  24341877 gatcttcaaactttttgcacaagatatttttgtataagatcttcatatttttg 24341825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 19181 - 19287
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19181 ttgttcaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttgtcctcaatccttgcaccagatatttttgtataagatctt 19280  T
Q  229 ttatatt 235  Q
    |||||||    
T  19281 ttatatt 19287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 3e-44; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 15059285 - 15059179
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  15059285 ttgtacaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttgtcctcaatccttgcaccagatatttttgtgtaagatctt 15059186  T
Q  229 ttatatt 235  Q
    |||||||    
T  15059185 ttatatt 15059179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 20967601 - 20967494
Alignment:
Q  128 tttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatct 227  Q
    |||||||||||||||||||||||||||| |  |||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20967601 tttgtacaagatcttcaaattctttgcataagatatttttgtataacatattcatatttttgtcctcaatccttgcaccagatatttttgtataagatct 20967502  T
Q  228 tttatatt 235  Q
    ||||||||    
T  20967501 tttatatt 20967494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 23343780 - 23343886
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||| |||||    
T  23343780 ttgtacaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttgtcctcaatccttgcacaagatatttttgtgtaaaatctt 23343879  T
Q  229 ttatatt 235  Q
    |||||||    
T  23343880 ttatatt 23343886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 20104160 - 20104283
Alignment:
Q  102 tggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatcctt 201  Q
    ||||||||||| |||||   ||||| |||||| |||||||||||||||||||||||  ||||||||||||||||| |||||||||||| | | || ||||    
T  20104160 tggggcgcgccacttgt---tatatttttgtataagatcttcaaattctttgcacaagatatttttgtatgagatcttcatatttttggcatgaaccctt 20104256  T
Q  202 gcaccagatatttttgtataagatctt 228  Q
    |||| |||||||||||||| |||||||    
T  20104257 gcacaagatatttttgtatgagatctt 20104283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 12410476 - 12410408
Alignment:
Q  5 atcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtccgg 74  Q
    |||||||||||||||||||| |||||| || ||| |||||||||||||||||||||||||||||||||||    
T  12410476 atcactagaatgttccacaagaaaccatgggctt-taggtcagaaataaactaataggtagcttgtccgg 12410408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 2953795 - 2953853
Alignment:
Q  131 gtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||| ||||||||||||    
T  2953795 gtacaagatcttcaatttctttgcacaagatatttttgtatgagatcttcatatttttg 2953853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 20738182 - 20738122
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||||| || |||||||||    
T  20738182 ttgtacaagatcttcaatttctttgcacaagatatttttgtatgagatctttatatttttg 20738122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 21273476 - 21273376
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||| |||||| |||||||||||| ||||  |||| || ||||||||| |||||||||||| | | |||| |||||| | ||||||||| || |||||||    
T  21273476 ttgtgcaagatattcaaattctttacacaacatatattggtatgagatcttcatatttttggcatgaatctttgcacaatatatttttgcatgagatctt 21273377  T
Q  229 t 229  Q
    |    
T  21273376 t 21273376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 31758264 - 31758325
Alignment:
Q  8 actagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttg 69  Q
    ||||||||||| ||||| ||||||  | ||| |||||||||| |||||||||||||||||||    
T  31758264 actagaatgtttcacaagaaaccacaggcttgtaggtcagaagtaaactaataggtagcttg 31758325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 16676909 - 16676857
Alignment:
Q  137 gatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    |||||||||| | ||||||||  |||||||||||| |||| ||||||||||||    
T  16676909 gatcttcaaactttttgcacaagatatttttgtataagatcttcatatttttg 16676857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 9328 - 9434
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9328 ttgtacaagatcttcaaattcttttcacatgatatttttgtatgagatattcatatttttgtcctcaatccttgcaccagatatttttgtataagatctt 9427  T
Q  229 ttatatt 235  Q
    | |||||    
T  9428 tcatatt 9434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 10047 - 10152
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  10047 ttgtacaagatcttcaaattctttgcacatgatatttttgtatgagatattcatatttttgtcctcaatcattgcacca-atatttttgtataagatctt 10145  T
Q  229 ttatatt 235  Q
    |||||||    
T  10146 ttatatt 10152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 61703 - 61595
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtata 221  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||     ||||||||||||||| |||||||||||||||||||||||||||||    
T  61703 tatatttttgtacaagatcttcaaattctttgcacaggatatttttgtat-----attcatatttttgtcctcaatccttgcaccagatatttttgtata 61609  T
Q  222 agatcttttatatt 235  Q
    ||||||||||||||    
T  61608 agatcttttatatt 61595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 38210 - 38317
Alignment:
Q  128 tttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatct 227  Q
    |||| |||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |    
T  38210 tttgcacaaaatattcaaattctttgcacaaaatatttttgtatgagatattcatatttttgtcctcaatccttgcaacagatatttttgtataagatat 38309  T
Q  228 tttatatt 235  Q
    ||||||||    
T  38310 tttatatt 38317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 157
Target Start/End: Original strand, 38182 - 38217
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcaca 157  Q
    ||||| ||||||||||||||||||||||||||||||    
T  38182 tatatttttgtacaagatcttcaaattctttgcaca 38217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 48642 - 48536
Alignment:
Q  129 ttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    |||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||| |||||||||||| ||| |||||||||||||||||||    
T  48642 ttgtacaagatcttcaaattctttgcacatgatatttttgtatgggatattcatatttttgtcctcaatccttgcaacagctatttttgtataagatctt 48543  T
Q  229 ttatatt 235  Q
    | |||||    
T  48542 tcatatt 48536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 76 - 217
Target Start/End: Complemental strand, 6318 - 6182
Alignment:
Q  76 aagcaaaagctacaaaaggactaaagtggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgaga 175  Q
    ||||||||||  |||||||||||||||||||| ||||||||    | |||||||||||||||||||||||||| ||| ||||  ||||||||||||||||    
T  6318 aagcaaaagcagcaaaaggactaaagtggggc-cgcctctt----aaatatatttgtacaagatcttcaaattttttacacatgatatttttgtatgaga 6224  T
Q  176 tattcatatttttgtcttcaatccttgcaccagatatttttg 217  Q
    |||||||||||||||| |||||||||||| || |||||||||    
T  6223 tattcatatttttgtcctcaatccttgcagcatatatttttg 6182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 76 - 217
Target Start/End: Complemental strand, 10932 - 10796
Alignment:
Q  76 aagcaaaagctacaaaaggactaaagtggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgaga 175  Q
    ||||||||||  |||||||||||||||||||| ||||||||    | |||||||||||||||||||||||||| ||| ||||  ||||||||||||||||    
T  10932 aagcaaaagcagcaaaaggactaaagtggggc-cgcctctt----aaatatatttgtacaagatcttcaaattttttacacatgatatttttgtatgaga 10838  T
Q  176 tattcatatttttgtcttcaatccttgcaccagatatttttg 217  Q
    |||||||||||||||| |||||||||||| || |||||||||    
T  10837 tattcatatttttgtcctcaatccttgcagcatatatttttg 10796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 76 - 217
Target Start/End: Complemental strand, 8927 - 8791
Alignment:
Q  76 aagcaaaagctacaaaaggactaaagtggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgaga 175  Q
    ||||||||||  |||||||||||||||||||| ||||||||    | |||||||||||||||||||||||||| ||| ||||  ||||||||||||||||    
T  8927 aagcaaaagcagcaaaaggactaaagtggggc-cgcctctt----aaatatatttgtacaagatcttcaaattttttacacatgatatttttgtatgaga 8833  T
Q  176 tattcatatttttgtcttcaatccttgcaccagatatttttg 217  Q
    |||||||||||||||| |||||||||||| || |||||||||    
T  8832 tattcatatttttgtcctcaatccttgcagcatatatttttg 8791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 26796 - 26721
Alignment:
Q  160 atatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatcttttatatt 235  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26796 atatttttgtatgagatattcatgtttttgtcctcaatccttgcaccagatatttttgtataagatcttttatatt 26721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 49728 - 49622
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtata 221  Q
    ||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||| | | ||||||||||| | ||||||||| ||     
T  49728 tatatttttgtacaagatcttcaaattctttgcacaagatattttcgtatgagatcttcatatttttgacatgaatccttgcacaatatatttttgcatg 49629  T
Q  222 agatctt 228  Q
    |||||||    
T  49628 agatctt 49622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 1 - 67
Alignment:
Q  169 tatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatcttttatatt 235  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||    
T  1 tatgagatattcatatttttgtcctcaatccttgtaccagatatttttgtataagatctttcatatt 67  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 19763 - 19870
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtata 221  Q
    ||||| |||| |||||||||||||||||||||||||  | ||||||||||||||| |||||||||||| |   |||||||||||   ||||||||| ||     
T  19763 tatatttttgcacaagatcttcaaattctttgcacaagaaatttttgtatgagatcttcatatttttggcacgaatccttgcacggtatatttttgcatg 19862  T
Q  222 agatcttt 229  Q
    ||||||||    
T  19863 agatcttt 19870  T

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Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 189
Target Start/End: Original strand, 44414 - 44596
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaact-aataggtagcttgtccggaaagcaaaagctacaaaaggactaaag 101  Q
    |||||||||||||||||||||| |||||| |  ||| ||| ||| || |||||| |||||||||||||||    ||||| || | || |||||   ||||    
T  44414 acatcactagaatgttccacaagaaaccatgagcttttagatcataagtaaacttaataggtagcttgtctttgaagcagaaacaacgaaagggtaaaag 44513  T
Q  102 tggggcgcgcctcttgtatatatatatttgtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
      ||||||||| |||||   ||||| |||| |||||||||||||||||||||||||  ||||||||| ||||||| || ||| |||||    
T  44514 --gggcgcgccacttgt---tatatttttgcacaagatcttcaaattctttgcacaatatatttttgcatgagatctttataattttg 44596  T

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Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 172686 - 172620
Alignment:
Q  5 atcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtc 71  Q
    ||||||||||||||||| || |||||| || ||| ||||||| ||||||||||||||||||||||||    
T  172686 atcactagaatgttccagaagaaaccacgggcttttaggtcataaataaactaataggtagcttgtc 172620  T

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Target: scaffold0334 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 7036 - 6978
Alignment:
Q  131 gtacaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttg 189  Q
    ||||||||||||| |||||||||||||  |||||||| |||||||| ||||||||||||    
T  7036 gtacaagatcttctaattctttgcacaagatatttttatatgagatcttcatatttttg 6978  T

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Target: scaffold0362 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 9296 - 9349
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaact 56  Q
    |||||||||||||||||||||| |||||| || ||| |||||||||||||||||    
T  9296 acatcactagaatgttccacaagaaaccacgggcttttaggtcagaaataaact 9349  T

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Target: scaffold0168 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 9117 - 9212
Alignment:
Q  133 acaagatcttcaaattctttgcacagaatatttttgtatgagatattcatatttttgtcttcaatccttgcaccagatatttttgtataagatctt 228  Q
    ||||||| |||||||||||||||||  | ||||||| ||||||| |||||||||||| | | ||||||| ||  | ||||||||| || |||||||    
T  9117 acaagatgttcaaattctttgcacaatagatttttgcatgagatcttcatatttttggcatgaatccttccataatatatttttgcatgagatctt 9212  T

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Target: scaffold0264 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 22653 - 22724
Alignment:
Q  122 tatatatttgtacaagatcttcaaattctttgcacagaatatttttg----tatgagatattcatatttttg 189  Q
    ||||| ||||||||| ||||||||||||||||||||  |||||||||    |||||||| ||||||||||||    
T  22653 tatatttttgtacaatatcttcaaattctttgcacaagatatttttgtatatatgagatcttcatatttttg 22724  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 520698 - 520634
Alignment:
Q  5 atcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgt 70  Q
    |||||||||||||||||||| |||||| ||| || ||||||| | ||||| |||||||||||||||    
T  520698 atcactagaatgttccacaagaaaccatggaatt-taggtcatatataaattaataggtagcttgt 520634  T

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Target: scaffold1225 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1225
Description:

Target: scaffold1225; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 2282 - 2214
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataaactaataggtagcttgtc 71  Q
    |||||||||||||||| ||||  ||||||  |  || ||||| ||||||||||||||||||||||||||    
T  2282 acatcactagaatgtttcacaggaaaccatcgggttttaggttagaaataaactaataggtagcttgtc 2214  T

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Target: scaffold0084 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 31603 - 31553
Alignment:
Q  3 acatcactagaatgttccacaataaaccaaggacttataggtcagaaataa 53  Q
    |||||||||||||||||||||| ||||||  | ||| ||||||||||||||    
T  31603 acatcactagaatgttccacaagaaaccacaggcttttaggtcagaaataa 31553  T

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Target: scaffold0231 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 21272 - 21217
Alignment:
Q  3 acatcactagaatgttccacaataaacca-aggacttataggtcagaaataaactaa 58  Q
    |||||||||||||||||||||| |||||| |||| || ||||||||||||| |||||    
T  21272 acatcactagaatgttccacaagaaaccacagga-ttttaggtcagaaatacactaa 21217  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 168146 - 168090
Alignment:
Q  3 acatcactagaatgttccacaataaac-caaggacttataggtcagaaataaactaa 58  Q
    |||||| ||||||||||||||| |||| || || ||| |||||||||||||||||||    
T  168146 acatcaatagaatgttccacaagaaactcatgggcttttaggtcagaaataaactaa 168090  T

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