View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9264A_low_364 (Length: 245)
Name: NF9264A_low_364
Description: NF9264A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9264A_low_364 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 19 - 245
Target Start/End: Complemental strand, 44111920 - 44111694
Alignment:
| Q |
19 |
atagcaaacataaacttaatcaattaccataagcttgttgaaagcattttcattttcaactttggtcttcttgttggaagtcccaatttcactggatttc |
118 |
Q |
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| T |
44111920 |
atagcaaacataaacttaatcaattaccataagcttgttgaaagcattttcattttcaactttggtcttcttgttggaagtcccaatttcactggatttc |
44111821 |
T |
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| Q |
119 |
tcaccaccttcatccaaagttggtctctttccaaaatttccatgaccatcatcatcatttgaagtcatccatgatggaaggtttctcttggaagacatga |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44111820 |
tcaccaccttcatccaaagttggtctctttccaaaatttccatgaccatcatcatcatttgaagtcatccatgatggaaggtttctcttggaagacatga |
44111721 |
T |
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| Q |
219 |
tgacaataactacatgtaagatgataa |
245 |
Q |
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||||||||||||||||||||||||||| |
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| T |
44111720 |
tgacaataactacatgtaagatgataa |
44111694 |
T |
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