View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9264A_low_374 (Length: 245)
Name: NF9264A_low_374
Description: NF9264A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9264A_low_374 |
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Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 42686254 - 42686480
Alignment:
| Q |
1 |
agtgagttcctctgtacctctctaattaacatatcgtagcttctggatattattttccttatactttatttatgacattccttttgtaacttccacacct |
100 |
Q |
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| T |
42686254 |
agtgagttcctctgtacctctctaattaacatatcgtagcttctggatattattttccttatactttatttatgacattccttttgtaacttccacacct |
42686353 |
T |
|
| Q |
101 |
ggacaatggcattagttttagcacacatataacatgccattgtttacaccagttagcacctagaagaaatctcttatatatttcttaaatcaagttttat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
42686354 |
ggacaatggcattagttttagcacacatataacatgccattgtttacaccagttagcacctagaagaaatttcttatatatttcttaaatcaagttttat |
42686453 |
T |
|
| Q |
201 |
tttaccacctgatactaagatattctt |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
42686454 |
tttaccacctgatactaagatattctt |
42686480 |
T |
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