View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9264A_low_411 (Length: 241)

Name: NF9264A_low_411
Description: NF9264A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9264A_low_411
NF9264A_low_411
[»] chr2 (59 HSPs)
chr2 (113-228)||(41569469-41569585)
chr2 (1-88)||(18176996-18177083)
chr2 (1-88)||(41569324-41569411)
chr2 (14-86)||(37257508-37257580)
chr2 (4-88)||(42223883-42223967)
chr2 (1-88)||(433906-433993)
chr2 (9-88)||(4952416-4952495)
chr2 (1-74)||(7552625-7552700)
chr2 (1-88)||(29051583-29051668)
chr2 (14-88)||(42678805-42678880)
chr2 (1-88)||(4758567-4758654)
chr2 (1-88)||(26738809-26738895)
chr2 (1-67)||(670400-670466)
chr2 (9-67)||(5027233-5027291)
chr2 (14-88)||(6999009-6999083)
chr2 (14-88)||(39213711-39213785)
chr2 (10-75)||(20911870-20911935)
chr2 (15-88)||(31389603-31389676)
chr2 (4-88)||(7574491-7574575)
chr2 (4-88)||(10711780-10711864)
chr2 (14-78)||(32869892-32869956)
chr2 (14-88)||(6170686-6170760)
chr2 (14-88)||(28245784-28245857)
chr2 (14-88)||(35705550-35705623)
chr2 (14-88)||(40937005-40937079)
chr2 (174-227)||(41588523-41588576)
chr2 (3-88)||(44711919-44712004)
chr2 (24-76)||(6941011-6941063)
chr2 (19-87)||(29879899-29879967)
chr2 (15-78)||(2464192-2464254)
chr2 (1-76)||(5200154-5200228)
chr2 (3-78)||(28244171-28244245)
chr2 (2-88)||(42866806-42866892)
chr2 (14-88)||(2221049-2221123)
chr2 (14-88)||(9634377-9634451)
chr2 (1-51)||(17779475-17779525)
chr2 (14-88)||(25881600-25881674)
chr2 (14-88)||(35589328-35589402)
chr2 (14-75)||(18876862-18876923)
chr2 (51-88)||(36802952-36802989)
chr2 (32-88)||(42532697-42532754)
chr2 (14-88)||(13347755-13347830)
chr2 (13-76)||(17999618-17999680)
chr2 (40-87)||(26277152-26277199)
chr2 (38-88)||(4139272-4139322)
chr2 (24-74)||(4753231-4753281)
chr2 (14-88)||(5054664-5054738)
chr2 (14-88)||(9377512-9377586)
chr2 (14-88)||(15269917-15269991)
chr2 (24-74)||(28679387-28679437)
chr2 (14-88)||(29712034-29712108)
chr2 (54-88)||(34119633-34119667)
chr2 (54-88)||(38560734-38560768)
chr2 (14-88)||(39449323-39449397)
chr2 (31-88)||(42372535-42372593)
chr2 (31-88)||(18723650-18723707)
chr2 (14-74)||(2131497-2131557)
chr2 (39-75)||(13711332-13711368)
chr2 (33-88)||(40700251-40700307)
[»] chr5 (41 HSPs)
chr5 (1-88)||(5042304-5042391)
chr5 (10-88)||(18842258-18842336)
chr5 (1-78)||(2688914-2688991)
chr5 (1-88)||(35098933-35099020)
chr5 (4-88)||(6930990-6931074)
chr5 (1-88)||(16437492-16437580)
chr5 (14-78)||(33620674-33620738)
chr5 (1-88)||(4430864-4430951)
chr5 (1-88)||(8267748-8267835)
chr5 (1-88)||(5821539-5821627)
chr5 (1-88)||(37700516-37700602)
chr5 (10-88)||(21064163-21064241)
chr5 (1-75)||(23126269-23126342)
chr5 (14-88)||(43441794-43441868)
chr5 (14-78)||(15267850-15267914)
chr5 (14-88)||(9581635-9581709)
chr5 (14-88)||(19839927-19840001)
chr5 (3-88)||(20770187-20770272)
chr5 (4-88)||(18397096-18397180)
chr5 (1-88)||(2224846-2224934)
chr5 (14-88)||(8675374-8675448)
chr5 (3-88)||(189633-189718)
chr5 (3-88)||(19481112-19481197)
chr5 (1-74)||(39088797-39088869)
chr5 (21-88)||(6517768-6517835)
chr5 (14-77)||(41724256-41724319)
chr5 (14-88)||(1839286-1839360)
chr5 (2-88)||(9226357-9226442)
chr5 (14-88)||(10649491-10649565)
chr5 (14-88)||(15478714-15478788)
chr5 (14-88)||(15952986-15953060)
chr5 (14-88)||(34124677-34124751)
chr5 (14-88)||(38704138-38704212)
chr5 (14-88)||(41175647-41175721)
chr5 (32-88)||(43196584-43196640)
chr5 (4-88)||(43213990-43214074)
chr5 (53-87)||(6292178-6292212)
chr5 (54-88)||(21136319-21136353)
chr5 (33-74)||(17402881-17402922)
chr5 (1-74)||(42267416-42267488)
chr5 (1-37)||(9977212-9977248)
[»] chr8 (49 HSPs)
chr8 (1-88)||(45529174-45529261)
chr8 (1-88)||(1633818-1633905)
chr8 (1-88)||(7955935-7956022)
chr8 (1-88)||(11017861-11017948)
chr8 (1-88)||(16966841-16966928)
chr8 (1-88)||(11657929-11658015)
chr8 (1-88)||(36110194-36110281)
chr8 (1-74)||(32843870-32843943)
chr8 (1-88)||(7478836-7478922)
chr8 (1-88)||(30135943-30136030)
chr8 (10-88)||(40739850-40739927)
chr8 (1-88)||(35564345-35564432)
chr8 (10-88)||(41521024-41521102)
chr8 (1-88)||(7586091-7586177)
chr8 (1-88)||(37783899-37783986)
chr8 (14-88)||(41159830-41159904)
chr8 (1-88)||(7592905-7592993)
chr8 (1-88)||(1871543-1871629)
chr8 (15-86)||(13971182-13971253)
chr8 (1-87)||(32847614-32847701)
chr8 (1-88)||(33589159-33589245)
chr8 (1-68)||(34591340-34591407)
chr8 (1-88)||(36531651-36531737)
chr8 (31-88)||(38234063-38234120)
chr8 (2-88)||(2733044-2733129)
chr8 (14-88)||(30439447-30439521)
chr8 (3-88)||(31597004-31597089)
chr8 (33-88)||(4994437-4994492)
chr8 (14-88)||(16872097-16872171)
chr8 (26-87)||(1366657-1366718)
chr8 (4-88)||(16327082-16327167)
chr8 (1-70)||(39543451-39543520)
chr8 (10-74)||(8645234-8645298)
chr8 (44-88)||(36568014-36568058)
chr8 (14-88)||(6968174-6968248)
chr8 (14-88)||(12707205-12707280)
chr8 (10-88)||(6991745-6991823)
chr8 (14-88)||(7472968-7473041)
chr8 (54-88)||(9549180-9549214)
chr8 (54-88)||(16613690-16613724)
chr8 (18-88)||(29991468-29991537)
chr8 (54-88)||(34718171-34718205)
chr8 (12-73)||(888196-888257)
chr8 (3-88)||(5277634-5277719)
chr8 (3-88)||(23793020-23793105)
chr8 (14-74)||(12783835-12783895)
chr8 (19-87)||(29028907-29028975)
chr8 (14-74)||(36424543-36424603)
chr8 (14-74)||(37754632-37754691)
[»] chr7 (51 HSPs)
chr7 (1-88)||(29162904-29162991)
chr7 (1-88)||(32815224-32815311)
chr7 (10-88)||(40353320-40353398)
chr7 (1-88)||(13162975-13163062)
chr7 (1-88)||(38779672-38779759)
chr7 (1-88)||(39231656-39231743)
chr7 (10-87)||(39332042-39332119)
chr7 (1-88)||(19786007-19786094)
chr7 (1-88)||(37808692-37808779)
chr7 (1-75)||(13906385-13906459)
chr7 (1-88)||(21023045-21023132)
chr7 (10-75)||(41402577-41402642)
chr7 (1-88)||(41666850-41666937)
chr7 (14-88)||(47078193-47078266)
chr7 (14-88)||(13729782-13729856)
chr7 (14-87)||(28036801-28036874)
chr7 (3-83)||(35588821-35588901)
chr7 (15-87)||(39137209-39137281)
chr7 (2-70)||(41026132-41026199)
chr7 (1-83)||(29002669-29002749)
chr7 (14-88)||(44184500-44184574)
chr7 (3-88)||(10055562-10055647)
chr7 (14-88)||(21822540-21822614)
chr7 (14-88)||(43573484-43573558)
chr7 (1-74)||(26041248-26041320)
chr7 (3-87)||(16980354-16980437)
chr7 (1-57)||(46773592-46773648)
chr7 (14-88)||(18111552-18111627)
chr7 (1-88)||(20482583-20482670)
chr7 (14-88)||(11352915-11352989)
chr7 (18-88)||(11564949-11565018)
chr7 (1-87)||(31844533-31844619)
chr7 (14-88)||(35452514-35452588)
chr7 (14-87)||(3062387-3062460)
chr7 (14-83)||(12645851-12645920)
chr7 (31-88)||(21559854-21559911)
chr7 (1-87)||(27163588-27163673)
chr7 (32-88)||(33180669-33180725)
chr7 (1-85)||(39823868-39823951)
chr7 (1-88)||(36019473-36019559)
chr7 (14-88)||(39029914-39029989)
chr7 (14-88)||(3343271-3343345)
chr7 (39-88)||(35600727-35600777)
chr7 (54-88)||(40231687-40231721)
chr7 (14-88)||(41399104-41399178)
chr7 (54-88)||(46532558-46532592)
chr7 (54-88)||(47495026-47495060)
chr7 (14-83)||(4713634-4713703)
chr7 (26-75)||(46653040-46653089)
chr7 (14-78)||(25067289-25067353)
chr7 (14-74)||(46829549-46829609)
[»] chr4 (64 HSPs)
chr4 (1-88)||(41486071-41486158)
chr4 (1-88)||(36111323-36111411)
chr4 (1-88)||(6141706-6141793)
chr4 (1-88)||(21260354-21260441)
chr4 (1-88)||(30079902-30079989)
chr4 (1-87)||(42959328-42959415)
chr4 (1-87)||(51746277-51746363)
chr4 (13-88)||(624252-624327)
chr4 (1-88)||(33899254-33899341)
chr4 (1-88)||(5932086-5932172)
chr4 (1-88)||(9118792-9118879)
chr4 (1-88)||(14451449-14451536)
chr4 (1-88)||(51194325-51194412)
chr4 (1-78)||(12112693-12112770)
chr4 (1-88)||(25317994-25318080)
chr4 (1-88)||(31076110-31076196)
chr4 (1-88)||(41082374-41082460)
chr4 (1-63)||(50273001-50273063)
chr4 (1-74)||(35820241-35820314)
chr4 (3-88)||(39344910-39344995)
chr4 (1-78)||(53152249-53152326)
chr4 (1-88)||(47965795-47965880)
chr4 (1-88)||(26206905-26206992)
chr4 (1-75)||(17475946-17476019)
chr4 (24-88)||(37066044-37066108)
chr4 (1-88)||(439188-439275)
chr4 (14-88)||(28657382-28657456)
chr4 (3-88)||(26718424-26718509)
chr4 (3-88)||(26731052-26731137)
chr4 (3-88)||(28458307-28458392)
chr4 (1-74)||(48536366-48536441)
chr4 (1-88)||(54669512-54669598)
chr4 (14-88)||(2999168-2999242)
chr4 (14-88)||(14010059-14010133)
chr4 (14-88)||(46405915-46405989)
chr4 (10-88)||(48335610-48335688)
chr4 (14-88)||(49896607-49896681)
chr4 (23-88)||(30169970-30170035)
chr4 (3-87)||(13263328-13263411)
chr4 (14-86)||(27326693-27326765)
chr4 (14-88)||(13086078-13086152)
chr4 (14-88)||(22819705-22819779)
chr4 (14-88)||(31657702-31657776)
chr4 (18-88)||(51573577-51573647)
chr4 (3-88)||(13139204-13139289)
chr4 (24-76)||(2256281-2256333)
chr4 (20-78)||(23822194-23822250)
chr4 (14-88)||(45143614-45143686)
chr4 (14-88)||(45152383-45152455)
chr4 (14-88)||(47099078-47099150)
chr4 (32-78)||(6494852-6494898)
chr4 (14-88)||(18882916-18882990)
chr4 (54-88)||(21617239-21617273)
chr4 (14-88)||(38338863-38338937)
chr4 (18-88)||(45851816-45851885)
chr4 (3-88)||(52846159-52846242)
chr4 (14-75)||(12138922-12138983)
chr4 (31-87)||(34995377-34995434)
chr4 (14-74)||(23662258-23662318)
chr4 (14-74)||(33860716-33860776)
chr4 (14-74)||(37514073-37514133)
chr4 (31-87)||(49768276-49768332)
chr4 (44-88)||(55601672-55601716)
chr4 (14-74)||(56271430-56271490)
[»] chr3 (56 HSPs)
chr3 (1-88)||(390865-390952)
chr3 (1-88)||(37508426-37508513)
chr3 (1-88)||(39020087-39020174)
chr3 (1-88)||(44677412-44677499)
chr3 (1-88)||(10206901-10206988)
chr3 (1-88)||(49363179-49363266)
chr3 (1-88)||(28419142-28419229)
chr3 (1-88)||(32767732-32767819)
chr3 (1-83)||(30909090-30909172)
chr3 (14-88)||(33375916-33375990)
chr3 (1-88)||(11633669-11633756)
chr3 (1-88)||(43905029-43905116)
chr3 (14-88)||(8821686-8821760)
chr3 (1-88)||(22371247-22371334)
chr3 (1-88)||(39671025-39671112)
chr3 (1-87)||(36121878-36121964)
chr3 (14-88)||(49417631-49417704)
chr3 (14-88)||(54027998-54028072)
chr3 (1-75)||(54773681-54773755)
chr3 (1-78)||(29634000-29634077)
chr3 (1-88)||(46982831-46982918)
chr3 (1-87)||(54195396-54195483)
chr3 (1-67)||(55013079-55013145)
chr3 (23-88)||(46984582-46984647)
chr3 (1-88)||(39907474-39907561)
chr3 (14-88)||(39697163-39697237)
chr3 (14-88)||(52937239-52937313)
chr3 (14-88)||(55400055-55400129)
chr3 (14-88)||(21196180-21196254)
chr3 (14-88)||(24095347-24095421)
chr3 (23-88)||(26996372-26996435)
chr3 (14-88)||(37927146-37927220)
chr3 (14-88)||(46253678-46253752)
chr3 (2-88)||(49761363-49761449)
chr3 (4-85)||(24480382-24480463)
chr3 (31-88)||(50638309-50638366)
chr3 (14-78)||(13934544-13934607)
chr3 (14-88)||(24645412-24645486)
chr3 (39-88)||(37035491-37035541)
chr3 (14-88)||(46019518-46019592)
chr3 (14-88)||(50206911-50206985)
chr3 (14-88)||(51465855-51465929)
chr3 (25-74)||(21195842-21195891)
chr3 (15-88)||(24482905-24482978)
chr3 (32-88)||(52485528-52485585)
chr3 (33-88)||(23770705-23770758)
chr3 (1-65)||(35201468-35201531)
chr3 (1-88)||(51973296-51973383)
chr3 (24-74)||(9753409-9753459)
chr3 (14-88)||(20080129-20080202)
chr3 (18-88)||(31376711-31376780)
chr3 (3-88)||(3953405-3953490)
chr3 (3-88)||(34057883-34057968)
chr3 (32-88)||(44813406-44813463)
chr3 (3-87)||(21005106-21005190)
chr3 (31-83)||(54694071-54694123)
[»] chr1 (68 HSPs)
chr1 (1-88)||(46082049-46082136)
chr1 (1-88)||(756912-756999)
chr1 (1-88)||(902694-902781)
chr1 (1-88)||(1852879-1852966)
chr1 (1-88)||(3024678-3024765)
chr1 (1-88)||(3603167-3603254)
chr1 (1-88)||(20565046-20565133)
chr1 (1-88)||(33024499-33024586)
chr1 (1-88)||(38303616-38303703)
chr1 (10-88)||(8411655-8411733)
chr1 (1-88)||(4514382-4514469)
chr1 (1-88)||(7128174-7128261)
chr1 (12-88)||(46172346-46172422)
chr1 (1-88)||(9008281-9008368)
chr1 (1-88)||(26837508-26837595)
chr1 (1-88)||(36779197-36779284)
chr1 (1-87)||(26585807-26585893)
chr1 (24-88)||(21486268-21486332)
chr1 (1-88)||(51191844-51191931)
chr1 (14-88)||(47214264-47214337)
chr1 (14-88)||(51286309-51286382)
chr1 (1-88)||(16986994-16987080)
chr1 (1-88)||(21340578-21340664)
chr1 (1-88)||(34008236-34008322)
chr1 (1-88)||(36673660-36673746)
chr1 (14-88)||(32319251-32319324)
chr1 (3-88)||(50781500-50781585)
chr1 (1-88)||(1790564-1790651)
chr1 (14-88)||(13489718-13489792)
chr1 (14-88)||(50328082-50328156)
chr1 (14-88)||(52362538-52362612)
chr1 (4-88)||(32915003-32915087)
chr1 (42-88)||(29586049-29586095)
chr1 (14-88)||(40316885-40316959)
chr1 (14-88)||(44632584-44632657)
chr1 (14-88)||(34040439-34040515)
chr1 (3-88)||(34254281-34254366)
chr1 (2-78)||(50882039-50882115)
chr1 (1-88)||(19969490-19969577)
chr1 (14-88)||(10889987-10890061)
chr1 (14-88)||(15015454-15015528)
chr1 (18-88)||(48220089-48220159)
chr1 (14-88)||(50824797-50824871)
chr1 (14-88)||(52714842-52714916)
chr1 (3-88)||(46543373-46543457)
chr1 (14-86)||(3226001-3226073)
chr1 (14-78)||(24673132-24673195)
chr1 (2-78)||(35539202-35539278)
chr1 (2-78)||(38713636-38713712)
chr1 (3-78)||(4469358-4469433)
chr1 (23-78)||(37178769-37178824)
chr1 (38-88)||(8200131-8200181)
chr1 (14-88)||(35136900-35136974)
chr1 (14-88)||(36577353-36577427)
chr1 (14-88)||(37588617-37588690)
chr1 (18-88)||(44789089-44789158)
chr1 (18-88)||(46911349-46911418)
chr1 (14-88)||(47721465-47721539)
chr1 (14-88)||(47728457-47728531)
chr1 (3-88)||(49241435-49241520)
chr1 (39-88)||(49660235-49660285)
chr1 (2-87)||(8447793-8447878)
chr1 (55-88)||(33054070-33054103)
chr1 (14-75)||(48326037-48326098)
chr1 (54-87)||(48624933-48624966)
chr1 (32-73)||(50242382-50242423)
chr1 (1-88)||(41507122-41507210)
chr1 (25-88)||(48261195-48261259)
[»] chr6 (30 HSPs)
chr6 (10-88)||(3610898-3610976)
chr6 (14-88)||(11547470-11547544)
chr6 (1-88)||(2075379-2075466)
chr6 (1-88)||(2777245-2777331)
chr6 (1-88)||(34504076-34504163)
chr6 (1-75)||(14986672-14986746)
chr6 (1-76)||(30036722-30036797)
chr6 (10-88)||(4820307-4820387)
chr6 (1-75)||(5327519-5327593)
chr6 (1-88)||(335119-335204)
chr6 (1-88)||(30152458-30152545)
chr6 (2-87)||(14693181-14693266)
chr6 (3-88)||(35213491-35213576)
chr6 (1-88)||(13658888-13658974)
chr6 (14-88)||(754379-754453)
chr6 (1-88)||(3199016-3199102)
chr6 (1-88)||(22341103-22341189)
chr6 (14-88)||(14699605-14699679)
chr6 (14-75)||(32459457-32459518)
chr6 (14-88)||(13143323-13143397)
chr6 (30-88)||(20822825-20822883)
chr6 (14-74)||(1369430-1369490)
chr6 (53-88)||(6531163-6531198)
chr6 (39-88)||(10335606-10335656)
chr6 (14-88)||(18141242-18141316)
chr6 (54-88)||(32046754-32046788)
chr6 (18-88)||(33421816-33421885)
chr6 (33-74)||(23628429-23628470)
chr6 (31-88)||(24842424-24842480)
chr6 (32-88)||(26832702-26832758)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-88)||(63-150)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-88)||(122887-122973)
[»] scaffold0449 (1 HSPs)
scaffold0449 (1-87)||(9260-9346)
[»] scaffold0321 (1 HSPs)
scaffold0321 (10-88)||(19692-19770)
[»] scaffold0136 (1 HSPs)
scaffold0136 (3-88)||(38481-38566)
[»] scaffold0687 (1 HSPs)
scaffold0687 (1-88)||(2253-2341)
[»] scaffold0532 (1 HSPs)
scaffold0532 (2-88)||(11020-11106)
[»] scaffold0204 (1 HSPs)
scaffold0204 (10-88)||(23132-23210)
[»] scaffold0010 (1 HSPs)
scaffold0010 (15-88)||(134245-134318)
[»] scaffold1956 (1 HSPs)
scaffold1956 (14-88)||(825-900)
[»] scaffold0416 (1 HSPs)
scaffold0416 (39-88)||(6914-6963)
[»] scaffold0141 (1 HSPs)
scaffold0141 (14-83)||(11993-12062)
[»] scaffold0221 (1 HSPs)
scaffold0221 (14-74)||(8284-8344)


Alignment Details
Target: chr2 (Bit Score: 105; Significance: 1e-52; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 41569469 - 41569585
Alignment:
Q  113 aaatggaccttaattaaattcattgttaattttgacgtgtaaaaatcatcatcaagagtagtgtacaacaaaatgaatatttgccacacatgacacaaca 212  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41569469 aaatggaccttaattaaattcattgttaattttcacgtgtaaaaatcatcatcaagagtagtgtacaacaaaatgaatatttgccacacatgacacaaca 41569568  T
Q  213 atga-ttagtccacttc 228  Q
    |||| ||||||||||||    
T  41569569 atgatttagtccacttc 41569585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18177083 - 18176996
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  18177083 ttgacaaccatattttacaaagaaaaaagtgatattggcacggaaaccatagcaatagagagataaagaaaaaaataatgtgagtatg 18176996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41569324 - 41569411
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  41569324 ttgacaaccatattttacaaagaaaaaagtggtattggtacggaaaccatagcaatagagagataaagtaaaaagtaacgtgagtatg 41569411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 37257580 - 37257508
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagta 86  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||| |||||||    
T  37257580 tttacaaagaaaaaagtggtattgtcatggaaaccatagcaatagagagataaagtaaaaaataatgtgagta 37257508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 42223883 - 42223967
Alignment:
Q  4 acaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||  |||||| ||||||| |||||| ||| |||||||||    
T  42223883 acaattatattttacaaagaaaaaagtggtattgacacggaaaccataacaatagaaagataaaataaaaattaatgtgagtatg 42223967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 433993 - 433906
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| | |||||||||    
T  433993 ttgacaaccatactttacaaagaaaaaagtggtattgacacggaaatcatagcaatagagagataaagtaaaaaatgatgtgagtatg 433906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 4952416 - 4952495
Alignment:
Q  9 tatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||||||| | ||||||||||| ||||||||| ||||||||||||||||||||||||| |||| ||||    
T  4952416 tatattttacaaagaaaaaaattgtattggcacgaaaaccatagcaatagagagataaagtaaaaaataatgtgaatatg 4952495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7552700 - 7552625
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaa--accatagtaatagagagataaagtaaaaa 74  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||| ||||||    
T  7552700 ttgacaatcatattttacaaagaaaatagtggtattggcacggaaacaccatagtaatagagagataaaataaaaa 7552625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 29051583 - 29051668
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| || ||||||    
T  29051583 ttgacaaccatactttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagag--aaagtaaaaaataatgtaagtatg 29051668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 42678880 - 42678805
Alignment:
Q  14 tttacaaagaaaaaagt-ggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||||||||||| |||||||||    
T  42678880 tttacaaagaaaaaagtaggtatttgcacggaaaccaaagcaatagagagataaagtaaaaaataatgtgagtatg 42678805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 4758567 - 4758654
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| ||| ||| |||| ||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||| |||| ||||    
T  4758567 ttgataatcatactttataaagaaaaaagtgatattggcacggaaatcatagcaatagagagataaaataaaaaataatgtgaatatg 4758654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 26738809 - 26738895
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| |||||||||||||||||| ||  ||||||||| |||||||||| |||||||||||||| |||||||||| || ||||||    
T  26738809 ttgacaatcatattttacaaagaaaaa-gtaatattggcacagaaaccatagcaatagagagataaaataaaaaataatgtaagtatg 26738895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 670400 - 670466
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaa 67  Q
    |||||||  ||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||    
T  670400 ttgacaaccatattttacaaagaaaaaaatggtattgacacggaaatcatagcaatagagagataaa 670466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 5027291 - 5027233
Alignment:
Q  9 tatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaa 67  Q
    |||||||||||||||||||| | ||||||||||| ||||||||| ||||||||||||||    
T  5027291 tatattttacaaagaaaaaaattgtattggcacgaaaaccatagcaatagagagataaa 5027233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 6999009 - 6999083
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| |||||||||| ||||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  6999009 tttataaagaaaaaattggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 6999083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 39213711 - 39213785
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||||| ||||| |||| | || ||||||||||||||||||||||||| |||||||||    
T  39213711 tttacaaagaaaaagttggtatttgcacgaaaactaaaggaatagagagataaagtaaaaaataatgtgagtatg 39213785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 20911935 - 20911870
Alignment:
Q  10 atattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaa 75  Q
    |||||||||||||||||||  | |||| |||||||||||| || ||||||||||||||||||||||    
T  20911935 atattttacaaagaaaaaatagatatttgcacggaaaccaaagcaatagagagataaagtaaaaaa 20911870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 31389676 - 31389603
Alignment:
Q  15 ttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||| |||||| |||||||||||||  ||||| || ||||||| |||||||| |||||||||    
T  31389676 ttacaaagaaaaaagtagtattgtcacggaaaccataacaatagggaaataaagttaaaaataatgtgagtatg 31389603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 7574575 - 7574491
Alignment:
Q  4 acaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| |||| ||||||| |||||||  |||||| ||||| ||| || |||||||||||||||||||||||||||  |||||||||    
T  7574575 acaactataatttacaaggaaaaaataggtatttgcacgaaaatcaaagtaatagagagataaagtaaaaaatattgtgagtatg 7574491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 10711864 - 10711780
Alignment:
Q  4 acaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||| ||| |||||||||||||||  ||||||  |||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  10711864 acaatcataatttacaaagaaaaaataggtatttacacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 10711780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 32869956 - 32869892
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 78  Q
    ||||||||||||||| ||||||| ||||| |||||| || |||| ||||||||||||||||||||    
T  32869956 tttacaaagaaaaaattggtatttgcacgaaaaccaaagcaataaagagataaagtaaaaaataa 32869892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 6170760 - 6170686
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| ||| |||||| ||||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  6170760 tttataaaaaaaaaattggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaacgtgagtatg 6170686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 28245857 - 28245784
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||   |||||| ||||| |||||| || ||||||||||||||||||||||||| |||||||||    
T  28245857 tttacaaagaaaaata-ggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaaataatgtgagtatg 28245784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 35705623 - 35705550
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||| || |||||| |||| ||||||||| |||| ||||||||||||||| |||| |||||||||    
T  35705623 tttacaaagaaaaa-gtagtattgacacgaaaaccatagcaataaagagataaagtaaaatataatgtgagtatg 35705550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 40937005 - 40937079
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||   |||||| ||||| ||| || || ||||||||||||||||||||||||| |||||||||    
T  40937005 tttacaaagaaaaagtgggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatg 40937079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 41588523 - 41588576
Alignment:
Q  174 tgtacaacaaaatgaatatttgccacacatgacacaacaatgattagtccactt 227  Q
    |||||| |||||||||| |||||||||||||||||||||| | |||||||||||    
T  41588523 tgtacaccaaaatgaatctttgccacacatgacacaacaaaggttagtccactt 41588576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 44711919 - 44712004
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||| |||| ||||||| ||  |||||| ||||| ||| || || ||||||||||||||||||||||||  |||||||||    
T  44711919 gacaattataatttataaagaaagaataggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaatagtgtgagtatg 44712004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 6941063 - 6941011
Alignment:
Q  24 aaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaat 76  Q
    ||||||| ||||||||||||||||||||  |||| ||||||||||||||||||    
T  6941063 aaaaagtagtattggcacggaaaccataacaataaagagataaagtaaaaaat 6941011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 29879967 - 29879899
Alignment:
Q  19 aaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 87  Q
    |||| ||||||| |||||| |||| ||||||||  |||||||||||||||| |||||||| ||||||||    
T  29879967 aaaggaaaaagtagtattgacacgtaaaccataacaatagagagataaagttaaaaataatgtgagtat 29879899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 2464192 - 2464254
Alignment:
Q  15 ttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 78  Q
    ||||||||||||| || |||||| ||||||||| |||| |||||||||||||||| ||||||||    
T  2464192 ttacaaagaaaaaggtagtattgacacggaaac-atagcaatagagagataaagttaaaaataa 2464254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 5200154 - 5200228
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaat 76  Q
    |||||||  ||| |||||||||||||| || ||||||||||||||| ||||| |||| | ||||||||||||||||    
T  5200154 ttgacaaccataatttacaaagaaaaa-gtagtattggcacggaaatcatagcaataaaaagataaagtaaaaaat 5200228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 28244171 - 28244245
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 78  Q
    |||||||||| ||| |||||||||||  ||||||| |||| ||| || || |||||||||||||||||||||||||    
T  28244171 gacaattataatttgcaaagaaaaaataggtattg-cacgaaaatcaaagcaatagagagataaagtaaaaaataa 28244245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 42866892 - 42866806
Alignment:
Q  2 tgacaattatattttacaaagaaaaaagtgg-tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||| ||| |||||||||||||| |||| |||| ||||| | | || || ||||||||||||||||||||||||| |||||||||    
T  42866892 tgacaatcataatttacaaagaaaaa-gtggatatttgcacgaagatcaaagcaatagagagataaagtaaaaaataatgtgagtatg 42866806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 2221123 - 2221049
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| |||||||||   |||||| ||||||||| || || |||||||||||||||| |||||||| |||||||||    
T  2221123 tttataaagaaaaagtaggtatttgcacggaaatcaaagcaatagagagataaagtgaaaaataatgtgagtatg 2221049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 9634377 - 9634451
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||||| ||||| |||||| |  |||| |||||||||||||||| ||| |||||||||    
T  9634377 tttacaaagaaaaagttggtatttgcacgaaaaccaaaacaatatagagataaagtaaaaagtaatgtgagtatg 9634451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17779525 - 17779475
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccata 51  Q
    |||||||  ||| |||||||||||||||||||||||| |||||||||||||    
T  17779525 ttgacaaccatactttacaaagaaaaaagtggtattgacacggaaaccata 17779475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 25881674 - 25881600
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||  ||||||   ||| |||||| || || |||||||||||||||||||||| |||||||||    
T  25881674 tttacaaagaaaaaataggtatttatacgaaaaccaaagcaacagagagataaagtaaaaaataatgtgagtatg 25881600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 35589328 - 35589402
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  || |||| ||||| |||||| |  ||||||||||||||||||||| ||| |||||||||    
T  35589328 tttacaaagaaaaagttgatatttgcacgaaaaccaaaacaatagagagataaagtaaaaagtaatgtgagtatg 35589402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 18876862 - 18876923
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaa 75  Q
    |||| |||||||||   |||||| |||||||||||| || ||||||||||||||||||||||    
T  18876862 tttataaagaaaaagtaggtatttgcacggaaaccaaagcaatagagagataaagtaaaaaa 18876923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 36802989 - 36802952
Alignment:
Q  51 agtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||||||||||||||| |||||||||    
T  36802989 agtaatagagagataaagtaaaaaataatgtgagtatg 36802952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 42532697 - 42532754
Alignment:
Q  32 gtattggcacggaaaccatagtaatagagagataaagtaaaaa-ataaagtgagtatg 88  Q
    ||||||||||| ||| || |||||||||||||||||||||||| |||| |||||||||    
T  42532697 gtattggcacgaaaatcaaagtaatagagagataaagtaaaaatataatgtgagtatg 42532754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 13347755 - 13347830
Alignment:
Q  14 tttacaaagaaaaaagt-ggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| ||| |||| |||| | ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  13347755 tttacaaaaaaataagttggtaattgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 13347830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 17999618 - 17999680
Alignment:
Q  13 ttttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaat 76  Q
    |||||||||||||||  || |||||||||| ||| || ||||||||||||||||| ||||||||    
T  17999618 ttttacaaagaaaaatatg-tattggcacgaaaatcaaagtaatagagagataaaataaaaaat 17999680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 26277199 - 26277152
Alignment:
Q  40 acggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 87  Q
    |||||||| | || ||||||||||||||||||||||||| ||||||||    
T  26277199 acggaaactaaagcaatagagagataaagtaaaaaataatgtgagtat 26277152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 4139272 - 4139322
Alignment:
Q  38 gcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||| |||||| |||||||||||||||| ||||||| ||| |||||||||    
T  4139272 gcacgaaaaccaaagtaatagagagataaggtaaaaattaatgtgagtatg 4139322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 4753281 - 4753231
Alignment:
Q  24 aaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    ||||||| |||||| |||||||| ||||| |||||||||||||| ||||||    
T  4753281 aaaaagtagtattgacacggaaatcatagcaatagagagataaaataaaaa 4753231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 5054738 - 5054664
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||   |||||| ||||| ||| || || |||||||||||||||||| | |||| |||||||||    
T  5054738 tttacaaagaaaaagtaggtatttgcacgaaaatcaaagcaatagagagataaagtaacacataatgtgagtatg 5054664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 9377586 - 9377512
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||   | |||| ||||| |||||| || ||||||||||||||||||||| ||| |||| ||||    
T  9377586 tttacaaagaaaaagtagatatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgaatatg 9377512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 15269991 - 15269917
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||   |||||| ||||| ||| || || ||||||||||||||||||||| ||| |||| ||||    
T  15269991 tttacaaagaaaaagtaggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgtgaatatg 15269917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 28679437 - 28679387
Alignment:
Q  24 aaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    ||||||| |||||| || ||||| ||||| |||||||||||||||||||||    
T  28679437 aaaaagtagtattgacatggaaatcatagcaatagagagataaagtaaaaa 28679387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 29712108 - 29712034
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||   |||||| |||   |||||| || ||||||||||||||||||||| ||| |||||||||    
T  29712108 tttacaaagaaaaagtaggtatttgcataaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 29712034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 34119633 - 34119667
Alignment:
Q  54 aatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||||||||||| |||||||||    
T  34119633 aatagagagataaagtaaaaaataatgtgagtatg 34119667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 38560768 - 38560734
Alignment:
Q  54 aatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||||||||||| |||||||||    
T  38560768 aatagagagataaagtaaaaaataatgtgagtatg 38560734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 39449397 - 39449323
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| |||||||||  ||||||| ||||| ||| || || ||||||||||||||||||||| |||  ||||||||    
T  39449397 tttataaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatctgagtatg 39449323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 42372593 - 42372535
Alignment:
Q  31 ggtattggcacggaaaccatagtaatagagagataaagtaa-aaaataaagtgagtatg 88  Q
    |||||| ||||||||| || || |||||||||||||||||| ||||||| |||||||||    
T  42372593 ggtatttgcacggaaatcaaaggaatagagagataaagtaaaaaaataatgtgagtatg 42372535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 18723707 - 18723650
Alignment:
Q  31 ggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| ||||| ||| || || |||| |||||||||||||||||||| |||||||||    
T  18723707 ggtatttgcacgaaaatcaaagcaataaagagataaagtaaaaaataatgtgagtatg 18723650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 2131557 - 2131497
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    |||||||| ||| ||  ||||||| || |||||||| | ||||||||||||||||||||||    
T  2131557 tttacaaaaaaataataggtattgacatggaaaccaaaataatagagagataaagtaaaaa 2131497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 13711332 - 13711368
Alignment:
Q  39 cacggaaaccatagtaatagagagataaagtaaaaaa 75  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  13711332 cacggaaaccaaagtaatagagagagaaagtaaaaaa 13711368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 40700307 - 40700251
Alignment:
Q  33 tattggcacggaaaccatagtaatagagagataaagtaaaaa-ataaagtgagtatg 88  Q
    ||||| |||| ||| || |||||||||||||||||||||||| |||| |||||||||    
T  40700307 tattgacacgaaaatcaaagtaatagagagataaagtaaaaatataatgtgagtatg 40700251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5042391 - 5042304
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5042391 ttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataatgtgagtatg 5042304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 18842258 - 18842336
Alignment:
Q  10 atattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||    
T  18842258 atattttacaaagaaaaaagtggtattggcacgaaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 18842336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 2688914 - 2688991
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 78  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  2688914 ttgacaactatattttacaaagaaaaaagttgtattggcacggaaaccatagcaatagagagataaagtaaaaaataa 2688991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 35098933 - 35099020
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| ||| |||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||| |||||||||    
T  35098933 ttgacaatcataatttacaaagaaaaaagtggtattgacacggaaactatagcaatagagagataaagtaaaaaataatgtgagtatg 35099020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 6930990 - 6931074
Alignment:
Q  4 acaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||| ||||||||| |||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||    
T  6930990 acaatcatattttacgaagaaaaaagtggtattgacacggaaatcatagcaatagagagataaagtaaaaaataatgtgagtatg 6931074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16437492 - 16437580
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagt-aaaaaataaagtgagtatg 88  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||| || ||||||||| |||||||||    
T  16437492 ttgacaatcatactttacaaagaaaaaagtggtattggcacggaaaccatatgaatagagagataaggtaaaaaaataatgtgagtatg 16437580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 33620738 - 33620674
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 78  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  33620738 tttacaaagaaaaaagtggtattgacacggaaaccatagcaatagagagataaagtaaaaaataa 33620674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 4430864 - 4430951
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| | |||||||||    
T  4430864 ttgacaagcatactttacaaagaaaaaagtggtattgacacgaaaaccatagcaatagagagataaagtaaaaaatgatgtgagtatg 4430951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 8267748 - 8267835
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| ||  |||||||||||||||||||||||| |||||||||||||  ||| ||||||||||||||||||||| |||||||||    
T  8267748 ttgacaatcatgctttacaaagaaaaaagtggtattgacacggaaaccataacaatggagagataaagtaaaaaataatgtgagtatg 8267835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 5821539 - 5821627
Alignment:
Q  1 ttgacaattatattttacaaagaaaa-aagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| ||| ||| ||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||| || ||||||    
T  5821539 ttgataatcatactttacaaagaaaaaaagtggtattggcacggaaaccatagctatagagagataaagtaaaaaataatgtaagtatg 5821627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 37700602 - 37700516
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||||||||| || ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  37700602 ttgacaaccataatttacaaagaaaaa-gtagtattggcacggaaaccatagcaatagagagataaggtaaaaaataatgtgagtatg 37700516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 21064163 - 21064241
Alignment:
Q  10 atattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||||||||||||||| |||||||| ||||  ||||| ||||||||||||||| ||| |||||||||    
T  21064163 atattttacaaagaaaaaagtggtattgacacggaaatcataacaatagggagataaagtaaaaagtaatgtgagtatg 21064241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 23126269 - 23126342
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaa 75  Q
    |||||||||||| |||||||||||||||||| | |||||||||||||||||  ||||||||||||| ||||||||    
T  23126269 ttgacaattatactttacaaagaaaaaagtgat-ttggcacggaaaccataacaatagagagataacgtaaaaaa 23126342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 43441868 - 43441794
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||| ||||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  43441868 tttacaaagaaaaaattggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 43441794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 15267914 - 15267850
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 78  Q
    |||||||||||||||||| ||||| |||| ||||||||  |||||||||||||||||||||||||    
T  15267914 tttacaaagaaaaaagtgatattgacacgaaaaccataacaatagagagataaagtaaaaaataa 15267850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 9581709 - 9581635
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||   |||||| |||||||||||| |  ||||||||||||||||||||||||| |||||||||    
T  9581709 tttacaaagaaaaagtaggtatttgcacggaaaccaaaacaatagagagataaagtaaaaaataatgtgagtatg 9581635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 19839927 - 19840001
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||| || |||| ||||| |||||| || |||||||| |||||||||||||||| |||||||||    
T  19839927 tttacaaagaaaaaattgatatttgcacgaaaaccaaagcaatagagatataaagtaaaaaataatgtgagtatg 19840001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 20770272 - 20770187
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| ||| ||||||||||||||   ||||||| |||| ||| || || ||||||||||||||||||||||||| |||||||||    
T  20770272 gacaatcataatttacaaagaaaaagtaggtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatg 20770187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 18397096 - 18397180
Alignment:
Q  4 acaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||| |||||||||||||||  |||||| ||||| |||||| || |||||||||||||| |||||| ||| || ||||||    
T  18397096 acaattataatttacaaagaaaaaataggtatttgcacgaaaaccaaagcaatagagagataaaataaaaagtaatgtaagtatg 18397180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2224934 - 2224846
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagta--aaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||||||||| || ||||||||||||||| |||||||||| ||||||||||||  |||||||| || ||||||    
T  2224934 ttgacaaccataatttacaaagaaaaa-gtagtattggcacggaaaacatagtaataaagagataaagtacgaaaaataatgtaagtatg 2224846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 8675374 - 8675448
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||||| ||||| ||| || || ||||||||||||||||||||| ||| |||||||||    
T  8675374 tttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatg 8675448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 189633 - 189718
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| ||| |||| |||||||||  || |||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  189633 gacaatcataatttataaagaaaaagttgatatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 189718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 19481112 - 19481197
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||| |||| ||||||||||||||  ||||||| ||||| | |||| |  ||||||||||||||||||||| ||| |||||||||    
T  19481112 gacaactataatttacaaagaaaaagttggtatttgcacgaagaccaaaacaatagagagataaagtaaaaagtaatgtgagtatg 19481197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 39088797 - 39088869
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    |||||||  |||||||||||||||||||  ||||||| || ||||||||||  |||||||||||||||||||||    
T  39088797 ttgacaacgatattttacaaagaaaaaaa-ggtattgacatggaaaccatatcaatagagagataaagtaaaaa 39088869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 6517835 - 6517768
Alignment:
Q  21 agaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  6517835 agaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 6517768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 41724319 - 41724256
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaata 77  Q
    |||||||||||||||  ||||||  ||||||||||| | ||||||||| |||||||||||||||    
T  41724319 tttacaaagaaaaaataggtatttacacggaaaccaaaataatagagaaataaagtaaaaaata 41724256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 1839286 - 1839360
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||  | |||| ||||| |||||| |  |||||| |||||||||||||||||| |||||||||    
T  1839286 tttacaaagaaaaaatagatatttgcacgaaaaccaaaacaatagaaagataaagtaaaaaataatgtgagtatg 1839360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 9226442 - 9226357
Alignment:
Q  2 tgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||| ||||||||||||||    ||||| ||||||||| || |  ||||||||||||||||| ||||||| |||||||||    
T  9226442 tgacaattataatttacaaagaaaaagtaagtatttgcacggaaatcaaaacaatagagagataaagta-aaaataatgtgagtatg 9226357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 10649565 - 10649491
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||||  ||||| ||| || || ||||||||||||||||||||| ||| |||||||||    
T  10649565 tttacaaagaaaaagttggtatgtgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatg 10649491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 15478788 - 15478714
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  || |||| ||||| |||||| |  ||| ||||||||||||||||||||| |||||||||    
T  15478788 tttacaaagaaaaagttgatatttgcacgaaaaccaaaacaattgagagataaagtaaaaaataatgtgagtatg 15478714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 15952986 - 15953060
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||   |||||| ||||| ||| || || |||||||||||||||||||||||||  ||||||||    
T  15952986 tttacaaagaaaaagtgggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatatgagtatg 15953060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 34124751 - 34124677
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  |||||||  |||| |||||| || |||||||| |||||||||||| ||| |||||||||    
T  34124751 tttacaaagaaaaagttggtatttacacgaaaaccaaagcaatagagaaataaagtaaaaagtaatgtgagtatg 34124677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 38704138 - 38704212
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||||| ||||| ||| || || |||||| | |||||||||||||||| |||||||||    
T  38704138 tttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagaaaaataaagtaaaaaataatgtgagtatg 38704212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 41175647 - 41175721
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||   |||||| ||||| | | || || ||||||||||||||||||||||||| |||||||||    
T  41175647 tttacaaagaaaaagtgggtatttgcacgaagatcaaagcaatagagagataaagtaaaaaataatgtgagtatg 41175721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 43196584 - 43196640
Alignment:
Q  32 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||| ||||| ||| || || ||||||||||||||||||||||||| |||||||||    
T  43196584 gtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatg 43196640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 43213990 - 43214074
Alignment:
Q  4 acaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| |||| |||| ||||||||||  |||||| ||||| |||||| |  |||| |||||||||||||||| ||| |||||||||    
T  43213990 acaactataatttataaagaaaaaataggtatttgcacgaaaaccaaaacaataaagagataaagtaaaaagtaatgtgagtatg 43214074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 6292212 - 6292178
Alignment:
Q  53 taatagagagataaagtaaaaaataaagtgagtat 87  Q
    |||||||||||||||||||||||||| ||||||||    
T  6292212 taatagagagataaagtaaaaaataatgtgagtat 6292178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 21136353 - 21136319
Alignment:
Q  54 aatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||||||||||| |||||||||    
T  21136353 aatagagagataaagtaaaaaataacgtgagtatg 21136319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 17402881 - 17402922
Alignment:
Q  33 tattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    ||||| |||||||| ||||| |||||||||||||||||||||    
T  17402881 tattgacacggaaatcatagcaatagagagataaagtaaaaa 17402922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42267488 - 42267416
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    |||||||  ||| |||| |||||||||| | |||||| |||||||| ||||  |||||||||||||||||||||    
T  42267488 ttgacaaccataatttataaagaaaaaa-tagtattgacacggaaatcataacaatagagagataaagtaaaaa 42267416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 9977248 - 9977212
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattg 37  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  9977248 ttgacaactatattttacaaagaaaaaagtagtattg 9977212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 45529174 - 45529261
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  45529174 ttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 45529261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1633818 - 1633905
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||    
T  1633818 ttgacaaccatactttacaaagaaaaaagtggtattggcacagaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 1633905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 7955935 - 7956022
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  7955935 ttgacaaccatattttacaaagaaaaaagtggtattggcgcggaaaccatagcaatagagagataaagtaaaaagtaatgtgagtatg 7956022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 11017948 - 11017861
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||| |||  ||||||||||||||||||||||||| |||||||||    
T  11017948 ttgacaactatattttacaaagaaaaaagtggtattggcatggaaacgataacaatagagagataaagtaaaaaataatgtgagtatg 11017861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 16966928 - 16966841
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  16966928 ttgacaaccatactttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtagaaaataatgtgagtatg 16966841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 11657929 - 11658015
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| ||| |||||||||    
T  11657929 ttgacaatcatattttacaaagaaaaaagtggt-ttggcacggaaaccataataatagagagataaaataaaaagtaatgtgagtatg 11658015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 36110281 - 36110194
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| ||| |||||||||    
T  36110281 ttgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccataacaatagagagataaagtaaaaagtaatgtgagtatg 36110194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 32843870 - 32843943
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32843870 ttgacaaccatactttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaa 32843943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 7478922 - 7478836
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| ||| |||||||||||||| || ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  7478922 ttgacaatcataatttacaaagaaaaa-gtagtattggcacggaaaccatagcaatagagagataaggtaaaaaataatgtgagtatg 7478836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 30135943 - 30136030
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  |||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||| ||| |||| ||||    
T  30135943 ttgacaaccatattttacaaagaaagaagtggtattgacacggaaaccatagtaataaagagataaagtaaaaagtaatgtgaatatg 30136030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 40739850 - 40739927
Alignment:
Q  10 atattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||| |||| ||||    
T  40739850 atattttacaaagaaaaaa-tggtattggcacggaaaccataacaatagagagataaagtaaaaaataatgtgaatatg 40739927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 35564432 - 35564345
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||||||||||||||||||||||| ||||  |||| |||||| |||||||||||||||||| |||||||||    
T  35564432 ttgacaaccatactttacaaagaaaaaagtggtattggcacagaaattatagcaatagatagataaagtaaaaaataatgtgagtatg 35564345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 41521102 - 41521024
Alignment:
Q  10 atattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||| |||||||||| ||| |||||||||| ||||  ||||||||||||||||||| |||||||||    
T  41521102 atattttacaaagaaaatagtggtattgacacagaaaccatagcaataacgagataaagtaaaaaataatgtgagtatg 41521024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 7586091 - 7586177
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||| |||| |||||||||||||| || | ||||||||||||| ||||  ||||||||||||||||||||||||| |||||||||    
T  7586091 ttgacaactataatttacaaagaaaaa-gtagcattggcacggaaaacatatcaatagagagataaagtaaaaaataatgtgagtatg 7586177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 37783899 - 37783986
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  |||||||||||||||||| ||||||||| |||||||| | ||| ||||||||||||||||||||| |||  ||||||||    
T  37783899 ttgacaaccatattttacaaagaaaaaggtggtattgacacggaaatcctagcaatagagagataaagtaaaaagtaatctgagtatg 37783986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 41159830 - 41159904
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||  |||||| ||||| |||||| || ||||||||||||||||||||||||| |||||||||    
T  41159830 tttacaaagaaaaaataggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaaataatgtgagtatg 41159904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 7592993 - 7592905
Alignment:
Q  1 ttgacaattatattttacaaagaaaa-aagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| ||| |||| ||| |||| || |||||||| |||||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  7592993 ttgacaatcatactttataaaaaaaataaatggtattgacacggaaaccatagcaatagagagataaagtaaaaaataatgtgactatg 7592905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1871543 - 1871629
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||||||||| || ||||| ||||||||||||||  |||||||||||||||| |||||||| |||||||||    
T  1871543 ttgacaaccataatttacaaagaaaaa-gttgtattcgcacggaaaccataacaatagagagataaagtgaaaaataatgtgagtatg 1871629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 13971253 - 13971182
Alignment:
Q  15 ttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagta 86  Q
    |||||||||||||||| ||||||||||||||||||||| |||| |||||||||||  ||| ||| |||||||    
T  13971253 ttacaaagaaaaaagtagtattggcacggaaaccatagcaatatagagataaagttcaaactaatgtgagta 13971182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 32847614 - 32847701
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagt-aaaaaataaagtgagtat 87  Q
    |||||||  ||| |||||||||||||||||||||||| ||||||||||| |  |||||||| ||||||| ||||||||| ||||||||    
T  32847614 ttgacaaccatactttacaaagaaaaaagtggtattgccacggaaaccacaacaatagagaaataaagtaaaaaaataatgtgagtat 32847701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 33589159 - 33589245
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||  || |||||||| |||||| || |||||||||||||||||||  ||| ||||||||||||||||||||| |||||||||    
T  33589159 ttgacaatcgtactttacaaaaaaaaaa-tgatattggcacggaaaccataacaatggagagataaagtaaaaaataatgtgagtatg 33589245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34591407 - 34591340
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaag 68  Q
    |||||||  ||| |||||||||||||||||||||||| |||||||||||||| |||| ||||||||||    
T  34591407 ttgacaaccatactttacaaagaaaaaagtggtattgacacggaaaccatagcaataaagagataaag 34591340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 36531737 - 36531651
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| | | |||||||||||||| || ||||||||||||||| ||||  |||||||||||||||||||||||||  ||||||||    
T  36531737 ttgacaatcaaaatttacaaagaaaaa-gtagtattggcacggaaatcataacaatagagagataaagtaaaaaataatatgagtatg 36531651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 38234120 - 38234063
Alignment:
Q  31 ggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| |||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  38234120 ggtatttgcacggaaaccaaagtaatagagagataaagtaaaaaattatgtgagtatg 38234063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 2733129 - 2733044
Alignment:
Q  2 tgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||| ||| |||| |||||||||   |||||| |||||||||||| | |||||||||||||||||| ||||||| |||||||||    
T  2733129 tgacaatcataatttataaagaaaaagtaggtatttgcacggaaaccaaaataatagagagataaagta-aaaataatgtgagtatg 2733044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 30439447 - 30439521
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||   ||||| ||||| ||| || || ||||||||||||||||||||||||| |||||||||    
T  30439447 tttacaaagaaaaaatgagtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatg 30439521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 31597089 - 31597004
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| ||| ||||||||||||||  ||||||| ||||  |||||| |  ||||||||||||||||||||| ||| |||||||||    
T  31597089 gacaatcataatttacaaagaaaaagttggtatttgcacaaaaaccaaaacaatagagagataaagtaaaaagtaatgtgagtatg 31597004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 4994492 - 4994437
Alignment:
Q  33 tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| |||||||||||| |  ||||||||||||||||||||||||| |||||||||    
T  4994492 tatttgcacggaaaccaaatcaatagagagataaagtaaaaaataatgtgagtatg 4994437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 16872097 - 16872171
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  || |||| ||||| ||| || || ||||||||||||||||||||| ||| |||||||||    
T  16872097 tttacaaagaaaaagttgatatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatg 16872171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 1366718 - 1366657
Alignment:
Q  26 aaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 87  Q
    ||||||||||||  ||||||| ||||| |||| ||||||||||||||||||||  |||||||    
T  1366718 aaagtggtattgatacggaaatcatagcaataaagagataaagtaaaaaataatttgagtat 1366657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 16327082 - 16327167
Alignment:
Q  4 acaattatattttacaaagaaaaaagtg-gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| |||| |||||||||||||||  | ||||| ||| | |||||| | |||||||||||||||||||||| ||| |||||||||    
T  16327082 acaactataatttacaaagaaaaaatagtgtatttgcaagaaaaccaaaataatagagagataaagtaaaaagtaatgtgagtatg 16327167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 39543451 - 39543520
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagta 70  Q
    |||||||| ||| |||||||||||||||   ||||| ||||||||| || || |||||||||||||||||    
T  39543451 ttgacaatcataatttacaaagaaaaaataagtatttgcacggaaaacaaagcaatagagagataaagta 39543520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 8645298 - 8645234
Alignment:
Q  10 atattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    |||||||||||||||||||   ||||| ||| |||||||| |  |||||||||||||||||||||    
T  8645298 atattttacaaagaaaaaataagtatttgcatggaaaccaaaacaatagagagataaagtaaaaa 8645234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 36568058 - 36568014
Alignment:
Q  44 aaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| || ||||||||||||||||||||||||| |||||||||    
T  36568058 aaaccaaagcaatagagagataaagtaaaaaataatgtgagtatg 36568014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 6968174 - 6968248
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaa-taaagtgagtatg 88  Q
    |||||||| |||||||| ||||||  ||||||||||||  |||||| ||||||||||||||| ||| |||||||||    
T  6968174 tttacaaa-aaaaaagtagtattgatacggaaaccataacaatagacagataaagtaaaaaagtaatgtgagtatg 6968248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 12707280 - 12707205
Alignment:
Q  14 tttacaaagaaaaaagt-ggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||| ||||||  |||| |||||| |  |||||||||||||| |||||| ||| |||||||||    
T  12707280 tttacaaagaaaaaagttggtatttacacgaaaaccaaaacaatagagagataaattaaaaagtaacgtgagtatg 12707205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 6991745 - 6991823
Alignment:
Q  10 atattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||||   | |||  ||||  |||||| || || |||||||||||||||||||||| |||||||||    
T  6991745 atattttacaaagaaaaagtagttatatgcacaaaaaccaaagcaaaagagagataaagtaaaaaataatgtgagtatg 6991823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 7472968 - 7473041
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||   |||||| ||||| |||| | || ||||||||||||||||||||| ||| |||||||||    
T  7472968 tttacaaagaaaaata-ggtatttgcacgaaaactaaagcaatagagagataaagtaaaaagtaatgtgagtatg 7473041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 9549180 - 9549214
Alignment:
Q  54 aatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||||||||||| |||||||||    
T  9549180 aatagagagataaagtaaaaaataatgtgagtatg 9549214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 16613724 - 16613690
Alignment:
Q  54 aatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||||||||||| |||||||||    
T  16613724 aatagagagataaagtaaaaaataatgtgagtatg 16613690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 29991537 - 29991468
Alignment:
Q  18 caaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||  ||||||| |||| ||| || || ||||||||||||||||||||||| | |||||||||    
T  29991537 caaagaaaaaataggtattg-cacgaaaatcaaagcaatagagagataaagtaaaaaatgatgtgagtatg 29991468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 34718205 - 34718171
Alignment:
Q  54 aatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||||||||||| |||||||||    
T  34718205 aatagagagataaagtaaaaaataatgtgagtatg 34718171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 888196 - 888257
Alignment:
Q  12 attttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaa 73  Q
    |||||| ||||||||||  | ||||| |||| |||||| ||||||||||||||||| |||||    
T  888196 attttataaagaaaaaatagatattgacacgaaaaccaaagtaatagagagataaaataaaa 888257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 5277634 - 5277719
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| ||| ||| |||||||| ||   ||||| ||||| ||| || || |||||||||||||| |||||||||| |||||||||    
T  5277634 gacaatgataatttgcaaagaaagaatatgtatttgcacgaaaatcaaagcaatagagagataaaataaaaaataatgtgagtatg 5277719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 23793020 - 23793105
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||| |||| |||||||||||| || || |||| ||||  || |||  | |||||| |||||||||||||||||| |||||||||    
T  23793020 gacaactataatttacaaagaaagaattgttatttgcacaaaatccaacgcaatagaaagataaagtaaaaaataatgtgagtatg 23793105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 12783895 - 12783835
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    |||| ||||||||||  |||||| | |||||||||| |  |||||||||||||||||||||    
T  12783895 tttataaagaaaaaataggtatttgtacggaaaccaaaacaatagagagataaagtaaaaa 12783835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 29028907 - 29028975
Alignment:
Q  19 aaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 87  Q
    ||||||||||  |||||| ||||  ||| || || |||||||||||||| |||||||||| ||||||||    
T  29028907 aaagaaaaaataggtatttgcacaaaaatcaaagcaatagagagataaattaaaaaataatgtgagtat 29028975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 36424543 - 36424603
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    |||| ||||||||||   ||||| |||||||||||| |  |||||||||||||||||||||    
T  36424543 tttataaagaaaaaatatgtatttgcacggaaaccaaaacaatagagagataaagtaaaaa 36424603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 37754691 - 37754632
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    ||||||||||||||   ||||||||||||||||||| |  |||||||||| ||||||||||    
T  37754691 tttacaaagaaaaata-ggtattggcacggaaaccaaaacaatagagagagaaagtaaaaa 37754632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 7e-33; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 29162904 - 29162991
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||||    
T  29162904 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccataacaatagagagataaagtaaaaagtaatgtgagtatg 29162991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 32815311 - 32815224
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||    
T  32815311 ttgacaaccatattttacaaagaaaaaagtggtattggcacagaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 32815224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 40353398 - 40353320
Alignment:
Q  10 atattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  40353398 atattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaaataaaaaataatgtgagtatg 40353320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 13163062 - 13162975
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||  ||||||||    
T  13163062 ttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaagtaatatgagtatg 13162975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 38779672 - 38779759
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||    
T  38779672 ttgacaaccatactttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagatgaagtaaaaaataatgtgagtatg 38779759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39231656 - 39231743
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  39231656 ttgacaaccatactttacaaagaaaaaggtggtattggcacggaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 39231743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 39332119 - 39332042
Alignment:
Q  10 atattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 87  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||    
T  39332119 atattttacaaagaaaaaagtggtattggcacggaaatcatagcaatagagagataaagtaaaaagtaatgtgagtat 39332042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 19786007 - 19786094
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  19786007 ttgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccagagcaatagagagataaagtaaaaagtaatgtgagtatg 19786094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 37808692 - 37808779
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| || ||||||    
T  37808692 ttgacaaccatattttacaaagaaaaaagtggtattggcacggaaagcataacaatagagagataaagtaaaaaataatgtaagtatg 37808779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 13906385 - 13906459
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaa 75  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  13906385 ttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccataacaatagagagataaagtaaaaaa 13906459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 21023045 - 21023132
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  |||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||| |||| ||||    
T  21023045 ttgacaaccatattttacaaagaaaaaagtggtattatcacggaaaccataacaatagagagataaagtaaaaaataatgtgaatatg 21023132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 41402642 - 41402577
Alignment:
Q  10 atattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaa 75  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||    
T  41402642 atattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagacaaagaaaaaaa 41402577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41666850 - 41666937
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  |||||||||||||||||||||  |||||||||||| ||||||  ||||||||||||||||||||| ||| |||||||||    
T  41666850 ttgacaaccatattttacaaagaaaaaagtaatattggcacggacaccataacaatagagagataaagtaaaaagtaatgtgagtatg 41666937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 47078193 - 47078266
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||| ||  |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  47078193 tttacaaagaaaaa-gtaatattggcacggaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 47078266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 13729856 - 13729782
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||| ||||||| ||||| ||||||  | ||||||||||||||||||||||||| |||||||||    
T  13729856 tttacaaagaaaaaattggtatttgcacgaaaaccaacgcaatagagagataaagtaaaaaataatgtgagtatg 13729782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 28036874 - 28036801
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 87  Q
    ||||||||||||||  ||||||| ||||| |||||| || ||||||||||||||||||||||||| ||||||||    
T  28036874 tttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaaataatgtgagtat 28036801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 35588821 - 35588901
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtga 83  Q
    |||||||||| ||||||||||||||  ||||||| ||||| ||| || || ||||||||||||||||||||||||| ||||    
T  35588821 gacaattataatttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgtga 35588901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 39137281 - 39137209
Alignment:
Q  15 ttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 87  Q
    ||||||||||||||||  |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||||||    
T  39137281 ttacaaagaaaaaagtaatattggtacggaaaccatagcaatatagagataaagttaaaaataatgtgagtat 39137209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 41026199 - 41026132
Alignment:
Q  2 tgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagta 70  Q
    |||||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||| ||||||    
T  41026199 tgacaatt-tatttgacaaagaaaaaagtggtattggtacggaaaccatagcaatagagagacaaagta 41026132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 29002749 - 29002669
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtga 83  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||  | |  |||||||||||||||| ||| ||||    
T  29002749 ttgacaactatattttacaaagaaaaaagttgtattggcacggaaaccataacagt--agagataaagtaaaaagtaatgtga 29002669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 44184500 - 44184574
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||  |||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  44184500 tttacaaagaaaaaataggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 44184574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 10055562 - 10055647
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||| |||| ||||||||||||||  ||||||| | ||  |||||| || ||||||||||||||||||||||||| |||||||||    
T  10055562 gacaactataatttacaaagaaaaagttggtatttgtacaaaaaccaaagcaatagagagataaagtaaaaaataatgtgagtatg 10055647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 21822540 - 21822614
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||| |||||||  |||| ||| || |||||||||||||||||||||||| ||| | |||||||    
T  21822540 tttacaaagaaaaaattggtatttacacgaaaatcaaagtaatagagagataaagtaaaaagtaatgcgagtatg 21822614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 43573484 - 43573558
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| |||||||||| ||||||| ||||| |||||| || ||||||||||||||||||||| ||| |||| ||||    
T  43573484 tttataaagaaaaaattggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgaatatg 43573558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 26041248 - 26041320
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    |||||||  ||| |||||||||||||| || |||||| |||||||| ||||| |||||||||||||||||||||    
T  26041248 ttgacaaccataatttacaaagaaaaa-gtagtattgacacggaaatcatagaaatagagagataaagtaaaaa 26041320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 16980437 - 16980354
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 87  Q
    |||||| ||| ||||||||||||||| ||||||| || || |||||| || | ||||||||||||||||||| ||| ||||||||    
T  16980437 gacaatcataatttacaaagaaaaaattggtatttgcccgaaaaccaaagca-tagagagataaagtaaaaagtaatgtgagtat 16980354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 46773592 - 46773648
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaata 57  Q
    |||||||  |||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  46773592 ttgacaaccatattttataaagaaaaaattggtattggcacggaaaccatagcaata 46773648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 18111552 - 18111627
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa-ataaagtgagtatg 88  Q
    |||||||||||||||  || ||||||| | ||| || |||||||||||||||||||||||| |||| |||||||||    
T  18111552 tttacaaagaaaaaataggcattggcaagaaaatcaaagtaatagagagataaagtaaaaatataatgtgagtatg 18111627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 20482670 - 20482583
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| ||||||| |||||||  |||||| | ||  |||||| |  |||||||||||||||||||||||||||||||||||    
T  20482670 ttgacaaccataatttacaaggaaaaaataggtatttgtacataaaccaaaacaatagagagataaagtaaaaaataaagtgagtatg 20482583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 11352915 - 11352989
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  |||||||  |||| |||||| || |||| |||||||||||||||| ||| |||||||||    
T  11352915 tttacaaagaaaaatttggtatttacacgaaaaccaaagcaataaagagataaagtaaaaagtaatgtgagtatg 11352989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 11565018 - 11564949
Alignment:
Q  18 caaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||  ||||||| |||| ||| || || ||||||||||||||||||||||||| |||||||||    
T  11565018 caaagaaaaaataggtattg-cacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatg 11564949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 31844533 - 31844619
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 87  Q
    ||||||| |||| ||||||||||||||   |||||| | ||  |||||| |  ||||||||||||||||||||||||| ||||||||    
T  31844533 ttgacaactataatttacaaagaaaaagtaggtatttgtacaaaaaccaaaacaatagagagataaagtaaaaaataatgtgagtat 31844619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 35452514 - 35452588
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| |||||||||   |||||| ||||||||| || || ||||||||||||||||||||||| | |||||||||    
T  35452514 tttataaagaaaaagaaggtatttgcacggaaatcaaagcaatagagagataaagtaaaaaattatgtgagtatg 35452588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 3062460 - 3062387
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 87  Q
    |||||||||||||||  |||||| ||||  |||||| |  ||||||||||||||||||||| ||| ||||||||    
T  3062460 tttacaaagaaaaaataggtatttgcacaaaaaccaaaacaatagagagataaagtaaaaagtaatgtgagtat 3062387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 12645851 - 12645920
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtga 83  Q
    ||||||||||||||  || |||| ||||| ||| || || ||||||||||||||||||||||||| ||||    
T  12645851 tttacaaagaaaaagttgatatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgtga 12645920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 21559911 - 21559854
Alignment:
Q  31 ggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| ||||| ||| || || ||||||||||||||||||||||||| |||||||||    
T  21559911 ggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatg 21559854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 27163588 - 27163673
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagt-aaaaaataaagtgagtat 87  Q
    |||||||  ||||||||||||||||||| ||||||||||| |||||  |||| | |  ||||||||||| ||||||||| ||||||||    
T  27163588 ttgacaaccatattttacaaagaaaaaaatggtattggcatggaaataatagcagt--agagataaagtaaaaaaataatgtgagtat 27163673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 33180669 - 33180725
Alignment:
Q  32 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||| ||||| |||||| |  ||||||||||||||||||||||||| |||||||||    
T  33180669 gtatttgcacgaaaaccaaaacaatagagagataaagtaaaaaataatgtgagtatg 33180725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 39823951 - 39823868
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagt 85  Q
    |||||||  ||| |||||||||||||| || |||||| ||||||||  |||  |||||| |||||||||||||||||| ||||||    
T  39823951 ttgacaaccataatttacaaagaaaaa-gtagtattgacacggaaattataacaatagaaagataaagtaaaaaataatgtgagt 39823868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 36019559 - 36019473
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||||||||    ||||||| ||| |||||||||| |||| |||||||||||| ||||||| |||||||||    
T  36019559 ttgacaaccataatttacaaagaaaaggtaggtattgacacagaaaccatagcaatatagagataaagta-aaaataatgtgagtatg 36019473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 39029989 - 39029914
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa-ataaagtgagtatg 88  Q
    |||||||| ||||||   ||||||||| | |||||| ||||||||||||||||| |||||| |||| |||||||||    
T  39029989 tttacaaataaaaaataagtattggcatgaaaaccaaagtaatagagagataaattaaaaacataatgtgagtatg 39029914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 3343271 - 3343345
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| |||||||||  ||| ||| ||||| |||||| || ||||||||||||||||||||| ||| |||| ||||    
T  3343271 tttataaagaaaaagttgggatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgaatatg 3343345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 35600777 - 35600727
Alignment:
Q  39 cacggaaaccatagtaatagagagataaagtaa-aaaataaagtgagtatg 88  Q
    ||||||||||| ||||||||||||| ||||||| ||||||| |||||||||    
T  35600777 cacggaaaccaaagtaatagagagaaaaagtaaaaaaataatgtgagtatg 35600727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 40231687 - 40231721
Alignment:
Q  54 aatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||||||||||| |||||||||    
T  40231687 aatagagagataaagtaaaaaataatgtgagtatg 40231721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 41399104 - 41399178
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||   |||||  |||| |||||| |  |||||||||||||||||||||||||  ||||||||    
T  41399104 tttacaaagaaaaaataagtatttacacgaaaaccaaaacaatagagagataaagtaaaaaataatatgagtatg 41399178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 46532592 - 46532558
Alignment:
Q  54 aatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||||||||||| |||||||||    
T  46532592 aatagagagataaagtaaaaaataatgtgagtatg 46532558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 47495060 - 47495026
Alignment:
Q  54 aatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||||||||||| |||||||||    
T  47495060 aatagagagataaagtaaaaaataatgtgagtatg 47495026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 4713703 - 4713634
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtga 83  Q
    ||||||||||||||   |||||| ||| ||||||||    ||||||||||||||||||||||||| ||||    
T  4713703 tttacaaagaaaaataaggtatttgcatggaaaccaacacaatagagagataaagtaaaaaataatgtga 4713634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 46653040 - 46653089
Alignment:
Q  26 aaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaa 75  Q
    ||||| |||||| |||||||||||||| |||| ||||||||| |||||||    
T  46653040 aaagtagtattgacacggaaaccatagcaataaagagataaaataaaaaa 46653089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 25067353 - 25067289
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 78  Q
    |||||||||||||||   ||||| ||| | |||||| |  |||||||||||||||||||||||||    
T  25067353 tttacaaagaaaaaaaatgtatttgcatgaaaaccaaaacaatagagagataaagtaaaaaataa 25067289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 46829609 - 46829549
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    ||||||||||||||   ||| |||||||| ||| || || |||||||||||||||||||||    
T  46829609 tttacaaagaaaaagtaggttttggcacgaaaatcaaagcaatagagagataaagtaaaaa 46829549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41486071 - 41486158
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  41486071 ttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaagtaatgtgagtatg 41486158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 36111323 - 36111411
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaa-taaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  36111323 ttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaaagtaatgtgagtatg 36111411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6141706 - 6141793
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||| | ||| |||||||||    
T  6141706 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaatcatagcaataaagagataaagtaaagagtaatgtgagtatg 6141793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21260441 - 21260354
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||||||| |||||||||    
T  21260441 ttgacaatcatattttacaaagaaaaaggtggtattggcacggaaaccataacaatagagagataaagaaaaaaataatgtgagtatg 21260354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 30079989 - 30079902
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||    
T  30079989 ttgacaaccataatttacaaagaaaaaagtggtattggcacggaaactatagcaatagagagataaagtaaaaaataatgtgagtatg 30079902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 42959415 - 42959328
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaa-aaaataaagtgagtat 87  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||||    
T  42959415 ttgacaatcatattttacaaagaaaaaagtggtattgacacggaaaccatagcaatagagagataaagtaaaaaaataatgtgagtat 42959328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 51746363 - 51746277
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 87  Q
    |||||||  |||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||| ||||||||    
T  51746363 ttgacaaacatattttacaaagaaaaaagtgatattggcacggaaaccataacaatagagagataaagtaaaaaataatgtgagtat 51746277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 624252 - 624327
Alignment:
Q  13 ttttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||| |||||||||    
T  624252 ttttacaaagaaaaaagtggtattggcacgaaaaccatagcaatagagagataaagtaaaaagtaatgtgagtatg 624327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 33899254 - 33899341
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||| ||||||||| |||||||||    
T  33899254 ttgacaaccatattttacaaagaaaaaaatggtattggcacggaaaccataacaatagagagataaagaaaaaaataatgtgagtatg 33899341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 5932086 - 5932172
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||| ||||||||| |||||||||    
T  5932086 ttgacaaccatattttacaaagaaaaaaatggtattggcacggaaaccatagcaatagaaagataaag-aaaaaataatgtgagtatg 5932172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 9118792 - 9118879
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||||||||||||| |||| ||||    
T  9118792 ttgacaaccatattttacaaagaaaaaaatggtattggcacgaaaatcatagcaatagagagataaagtaaaaaataatgtgattatg 9118879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 14451536 - 14451449
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  |||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||||||||||| ||| |||||||||    
T  14451536 ttgacaaccatattttacaaagaaaaaagtggtattgacacgaaaaccataacaatagagagataaagtaaaaactaatgtgagtatg 14451449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 51194412 - 51194325
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| | | |||||||||    
T  51194412 ttgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccataacaatagagagataaagtaaaaagtgatgtgagtatg 51194325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12112770 - 12112693
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 78  Q
    |||||||  ||| |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||    
T  12112770 ttgacaaccatactttacaaagaaaaaagtggtattgacacggaaatcatagcaatagagagataaagtaaaaaataa 12112693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25317994 - 25318080
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  |||||||||||||||||||||||||||| ||||||||||| || |||| ||||||||||||||||||||  ||||||||    
T  25317994 ttgacaaccatattttacaaagaaaaaagtggtattgacacggaaacca-agcaataaagagataaagtaaaaaataatatgagtatg 25318080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 31076196 - 31076110
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||| | |||||||||    
T  31076196 ttgacaaccataatttacaaagaaaaa-gtagtattgacacggaaaccatagtaatagagagataaagtaaaaaatgatgtgagtatg 31076110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 41082460 - 41082374
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||| |||||||||||||| || |||||| |||| ||| |||||||||||||||||||||| |||||||| |||||||||    
T  41082460 ttgacaattataatttacaaagaaaaa-gtagtattgacacgaaaatcatagtaatagagagataaagtgaaaaataatgtgagtatg 41082374  T

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Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 50273001 - 50273063
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagaga 63  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50273001 ttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagaga 50273063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35820314 - 35820241
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    ||||||| |||| ||||||||||||||||||||||||| ||||||| |||| ||||||||||| ||||||||||    
T  35820314 ttgacaactatagtttacaaagaaaaaagtggtattggtacggaaatcataataatagagagaaaaagtaaaaa 35820241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 39344910 - 39344995
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| ||| ||||||||||||||| ||||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  39344910 gacaatcataatttacaaagaaaaaattggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 39344995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 53152249 - 53152326
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 78  Q
    |||||||  ||| |||||||||||||||||||||||||||| |||||||||  |||| ||||||||||||||||||||    
T  53152249 ttgacaaccatactttacaaagaaaaaagtggtattggcacagaaaccataacaatatagagataaagtaaaaaataa 53152326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 47965880 - 47965795
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||||||||||| ||||||||  |||  |||||||||||||||| ||| |||||||||    
T  47965880 ttgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccatatcaat--agagataaagtaaaaagtaatgtgagtatg 47965795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 26206905 - 26206992
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||| || ||| |||||||||  ||||||||||||||||||||| ||| |||| ||||    
T  26206905 ttgacaaccatattttacaaagaaaaaagtggtactgacacagaaaccataacaatagagagataaagtaaaaagtaatgtgaatatg 26206992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 17476019 - 17475946
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaa 75  Q
    |||||||| ||| |||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||||||    
T  17476019 ttgacaatcataatttacaaagaaaaa-gtagtattgacacggaaaccatagcaatagagagataaagtaaaaaa 17475946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 37066108 - 37066044
Alignment:
Q  24 aaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||| ||||||||||||||| ||||| ||| ||||||||||||||||||||| |||||||||    
T  37066108 aaaaagtagtattggcacggaaatcatagcaatggagagataaagtaaaaaataatgtgagtatg 37066044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 439188 - 439275
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||||| | | ||||| ||||| ||||| || |||||||||||| ||| |||||||||    
T  439188 ttgacaaccatattttacaaagaaaaaagtggtatttgtatggaaatcatagcaatagggaaataaagtaaaaactaatgtgagtatg 439275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 28657382 - 28657456
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||    |||||| |||||||||||| || ||||||||||||||||||||||||| |||||||||    
T  28657382 tttacaaagaaaacgtaggtatttgcacggaaaccaaagcaatagagagataaagtaaaaaataatgtgagtatg 28657456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 26718509 - 26718424
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| ||| ||||||||||||||  ||||||| ||||  ||| || |||||||||||||||||||||||| ||| |||||||||    
T  26718509 gacaatcataatttacaaagaaaaagttggtatttgcacaaaaaacaaagtaatagagagataaagtaaaaagtaatgtgagtatg 26718424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 26731137 - 26731052
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| ||| ||||||||||||||  ||||||| ||||  ||| || |||||||||||||||||||||||| ||| |||||||||    
T  26731137 gacaatcataatttacaaagaaaaagttggtatttgcacaaaaaacaaagtaatagagagataaagtaaaaagtaatgtgagtatg 26731052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 28458307 - 28458392
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| ||| ||||||||||||||   ||||||| |||| ||| || || ||||||||||||||||||||||||| |||||||||    
T  28458307 gacaatcataatttacaaagaaaaagtaggtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatg 28458392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 48536441 - 48536366
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaataga--gagataaagtaaaaa 74  Q
    |||||||| ||||| ||||||||||||| | |||||| ||||||||||||| |||||||  |||||||||||||||    
T  48536441 ttgacaatcatattgtacaaagaaaaaaatagtattgacacggaaaccataataatagagagagataaagtaaaaa 48536366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 54669512 - 54669598
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||||||||| || |||||| |||||||||| ||| |||||||||||||||| |||||||| || ||||||    
T  54669512 ttgacaaccataatttacaaagaaaaa-gtagtattgacacggaaaccgtagcaatagagagataaagtgaaaaataatgtaagtatg 54669598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 2999242 - 2999168
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||||| ||| | |||||| || ||||||||||||||||||||||||| |||| ||||    
T  2999242 tttacaaagaaaaagttggtatttgcatgaaaaccaaagcaatagagagataaagtaaaaaataatgtgaatatg 2999168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 14010059 - 14010133
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| |||||||||| ||||||| ||||| |||||| | |||||||||||||||||||||| |||  ||||||||    
T  14010059 tttataaagaaaaaattggtatttgcacgaaaaccaaaataatagagagataaagtaaaaagtaatatgagtatg 14010133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 46405915 - 46405989
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||||| ||||| ||| || || ||||||||||||||||||||| ||| |||||||||    
T  46405915 tttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaattaatgtgagtatg 46405989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 48335688 - 48335610
Alignment:
Q  10 atattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| ||||||||||||  |||||||||| |||| |||| |||| | |||||||||||||||||| |||| ||||    
T  48335688 atattttataaagaaaaaagtaatattggcacgaaaactatagcaatataaagataaagtaaaaaataatgtgaatatg 48335610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 49896607 - 49896681
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  |||||||| |||| ||| || || ||||||||||||||||||||||||| |||| ||||    
T  49896607 tttacaaagaaaaagttggtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgactatg 49896681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 30169970 - 30170035
Alignment:
Q  23 aaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| ||| ||||||| | | ||||||||| ||||||||||||||||||||||||| |||||||||    
T  30169970 aaaagagtagtattggtatgaaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 30170035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 13263328 - 13263411
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 87  Q
    |||||| ||| ||| |||||||||||  | ||||| |||| ||| || || ||||||||||||||||||||||||||||||||||    
T  13263328 gacaatcataatttgcaaagaaaaaatagatattg-cacgaaaatcaaagcaatagagagataaagtaaaaaataaagtgagtat 13263411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 27326693 - 27326765
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagta 86  Q
    ||||||||||||||  ||||||| ||||| |||||| || |||||||| |||||||||||| ||| |||||||    
T  27326693 tttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagaaataaagtaaaaagtaatgtgagta 27326765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 13086152 - 13086078
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||||| ||||| ||| || || |||||||||||||| |||||| ||| |||||||||    
T  13086152 tttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaaataaaaagtaatgtgagtatg 13086078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 22819779 - 22819705
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||||| ||||| ||| || || |||| |||||||||||||||| ||| |||||||||    
T  22819779 tttacaaagaaaaagttggtatttgcacgaaaatcaaagcaataaagagataaagtaaaaagtaatgtgagtatg 22819705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 31657776 - 31657702
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| |||||||  |||||||  |||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  31657776 tttacatagaaaaagttggtatttacacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 31657702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 51573577 - 51573647
Alignment:
Q  18 caaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||  |||||| | ||| ||| || || ||||||||||||||||||||||||| |||||||||    
T  51573577 caaagaaaaaataggtatttgtacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatg 51573647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 13139289 - 13139204
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||| |||| ||||||||||||||  ||||||| ||||| |||||| |  |||||||||||||| |||||  ||| |||||||||    
T  13139289 gacaactataatttacaaagaaaaagttggtatttgcacgaaaaccaaaaaaatagagagataaattaaaaggtaatgtgagtatg 13139204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 2256281 - 2256333
Alignment:
Q  24 aaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaat 76  Q
    ||||||| ||||||  ||||||| ||||| |||||||||||||||||||||||    
T  2256281 aaaaagtagtattgaaacggaaatcatagcaatagagagataaagtaaaaaat 2256333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 23822194 - 23822250
Alignment:
Q  20 aagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 78  Q
    |||||||||||| ||||||||||||||||| |  |||  ||||||||||||||||||||    
T  23822194 aagaaaaaagtgatattggcacggaaaccaaaacaat--agagataaagtaaaaaataa 23822250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 45143614 - 45143686
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||||| ||||| |||||| | ||||  |||||||||||||||||||| |||| ||||    
T  45143614 tttacaaagaaaaagttggtatttgcacgaaaaccaaaataat--agagataaagtaaaaaataatgtgattatg 45143686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 45152383 - 45152455
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||||| ||||| |||||| | ||||  |||||||||||||||||||| |||| ||||    
T  45152383 tttacaaagaaaaagttggtatttgcacgaaaaccaaaataat--agagataaagtaaaaaataatgtgattatg 45152455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 47099150 - 47099078
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||| | | ||||| |||||  ||||| || ||||||||||||||||||||| ||| |||||||||    
T  47099150 tttacaaagaaaatattagtatttgcacg--aaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 47099078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 6494852 - 6494898
Alignment:
Q  32 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 78  Q
    |||||| |||||||||||||  |||||||| ||||||||||||||||    
T  6494852 gtattgacacggaaaccataacaatagagaaataaagtaaaaaataa 6494898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 18882916 - 18882990
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||  |||||| | ||| ||| || || ||||||||||||||||||||| ||  |||||||||    
T  18882916 tttacaaagaaaaaataggtatttgtacgaaaatcaaagcaatagagagataaagtaaaaagtattgtgagtatg 18882990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 21617273 - 21617239
Alignment:
Q  54 aatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||||||||||| |||||||||    
T  21617273 aatagagagataaagtaaaaaataatgtgagtatg 21617239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 38338863 - 38338937
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| ||||||||||  |||||| ||||  ||| || || ||||||||||||||||||||| ||| |||||||||    
T  38338863 tttataaagaaaaaataggtatttgcacaaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatg 38338937  T

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Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 45851885 - 45851816
Alignment:
Q  18 caaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||  ||||||| |||| ||| || ||||||| |||||||||||||||||| | |||||||||    
T  45851885 caaagaaaaaataggtattg-cacgaaaatcaaagtaataaagagataaagtaaaaaatgatgtgagtatg 45851816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 52846159 - 52846242
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| ||| ||||||||||||||  | ||||| ||||| |||||| || |||  |||||||||||||||| ||| |||||||||    
T  52846159 gacaatcataatttacaaagaaaaagtttgtatttgcacgaaaaccaaagcaat--agagataaagtaaaaagtaatgtgagtatg 52846242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 12138983 - 12138922
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaa 75  Q
    ||||||||||||||   |||||| ||||  ||| || |||||||||||||||||||||||||    
T  12138983 tttacaaagaaaaagtaggtatttgcacaaaaatcaaagtaatagagagataaagtaaaaaa 12138922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 34995434 - 34995377
Alignment:
Q  31 ggtattggcacggaaaccatagtaatagagagataaagtaaaaa-ataaagtgagtat 87  Q
    ||||||| ||||||||||| ||||||||||||  |||||||||| |||| ||||||||    
T  34995434 ggtattgacacggaaaccaaagtaatagagagtgaaagtaaaaacataaggtgagtat 34995377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 23662258 - 23662318
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    ||||||||||||||| || |||||||||| ||| || | ||| ||||||||||| ||||||    
T  23662258 tttacaaagaaaaaattgatattggcacgaaaatcaaaataacagagagataaaataaaaa 23662318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 33860776 - 33860716
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    ||||||||||||||    ||||| |||||||||||| |  |||||||||||||||||||||    
T  33860776 tttacaaagaaaaagtaagtatttgcacggaaaccaaaacaatagagagataaagtaaaaa 33860716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 37514073 - 37514133
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    ||||||||||||||   ||| |||||||| ||| || || |||||||||||||||||||||    
T  37514073 tttacaaagaaaaagtaggttttggcacgaaaatcaaagcaatagagagataaagtaaaaa 37514133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 49768276 - 49768332
Alignment:
Q  31 ggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 87  Q
    |||||| ||||| ||| || || |||||||||||||||||||||||||  |||||||    
T  49768276 ggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatatgagtat 49768332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 55601672 - 55601716
Alignment:
Q  44 aaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||| |||||||||||| ||||||| |||| |||||||||    
T  55601672 aaaccatagcaatagagagatatagtaaaatataatgtgagtatg 55601716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 56271490 - 56271430
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    ||||||||||||||   |||||| ||||| |||||| || |||||||||||||| ||||||    
T  56271490 tttacaaagaaaaagtaggtatttgcacgaaaaccaaagcaatagagagataaaataaaaa 56271430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 390952 - 390865
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||| |||||||||    
T  390952 ttgacaatcatattttacaaagaaaaaagtggtattgacacggaaactatagcaatagagagataaagtaaaaaataatgtgagtatg 390865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 37508426 - 37508513
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  37508426 ttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaagtaatgtgagtatg 37508513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39020087 - 39020174
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  39020087 ttgacaatcatattttacaaagaaaaaagtggtattgacacggaaaccatagcaatagagagataaagtaaaaagtaatgtgagtatg 39020174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 44677412 - 44677499
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  44677412 ttgacaaccatactttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 44677499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 10206901 - 10206988
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||| |||||||||    
T  10206901 ttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaacagagagataaagtaaaaagtaatgtgagtatg 10206988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 49363179 - 49363266
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||||    
T  49363179 ttgacaactatattttataaagaaaaaagtggtattggcacggaaaccatatcaatagagagataaagtaaaaagtaatgtgagtatg 49363266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 28419142 - 28419229
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| || ||||||    
T  28419142 ttgacaaccatattttacaaagaaaaaagtggtattggcatggaaaccataacaatagagagataaagtaaaaaataatgtaagtatg 28419229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 32767819 - 32767732
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| ||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  32767819 ttgacaaccatactttacaaagaaaaaagtggcattgacacggaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 32767732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 30909172 - 30909090
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtga 83  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| ||| ||||    
T  30909172 ttgacaatcatattttacaaagaaaaaagtggtattggcacgaaaaccataacaatagagagataaagtaaaaagtaatgtga 30909090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 33375990 - 33375916
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||    
T  33375990 tttacaaagataaaagtggtattggcacggaaactatagcaatagagagataaagtaaaaaataatgtgagtatg 33375916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 11633756 - 11633669
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  |||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||| ||||    
T  11633756 ttgacaaccatattttacaaaaagaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaagtaatgtgaatatg 11633669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 43905116 - 43905029
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  |||||||||||||||||||||||||||| ||| |||||||||  ||||||||||||||||||||| ||| |||||||||    
T  43905116 ttgacaaccatattttacaaagaaaaaagtggtattgacacagaaaccataacaatagagagataaagtaaaaagtaatgtgagtatg 43905029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 8821760 - 8821686
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||||    
T  8821760 tttacaaagaaaaaagtgatattgacacagaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 8821686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 22371334 - 22371247
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| ||| | ||||||||||||| |||||||||||  |||||||||| ||||||||||||||||||||||||| || ||||||    
T  22371334 ttgacaatcatactctacaaagaaaaaattggtattggcaaagaaaccatagcaatagagagataaagtaaaaaataatgtaagtatg 22371247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39671025 - 39671112
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  |||||||||||||||||||||| ||||| |||||||| ||||  ||||||||||||||||||||| ||| |||||||||    
T  39671025 ttgacaaccatattttacaaagaaaaaagtgatattgacacggaaatcataacaatagagagataaagtaaaaagtaatgtgagtatg 39671112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 36121964 - 36121878
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 87  Q
    |||||||  |||||||||||||||||| |||||||||||||  ||| ||||| ||||||||||||||||||||| ||| ||||||||    
T  36121964 ttgacaaccatattttacaaagaaaaatgtggtattggcacaaaaatcatagcaatagagagataaagtaaaaagtaacgtgagtat 36121878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 49417704 - 49417631
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||| || ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  49417704 tttacaaagaaaaa-gtagtattggcacggaaaccatagcaatagagagataaaataaaaaataatgtgagtatg 49417631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 54028072 - 54027998
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||||||||||| |||||||| ||||  ||||||||||||||||||||||||| || ||||||    
T  54028072 tttacaaagaaaaaagtggtattgacacggaaatcataacaatagagagataaagtaaaaaataatgtaagtatg 54027998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 54773681 - 54773755
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaa 75  Q
    |||||||  ||| |||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||    
T  54773681 ttgacaaccatactttacaaagaaaaaagtggtattgacacggaaaccatagcaagagagagataaagtaaaaaa 54773755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 29634000 - 29634077
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 78  Q
    |||||||  ||||||||||||||||||||||||||| ||||||||| ||||  ||||||||||||| |||||||||||    
T  29634000 ttgacaaccatattttacaaagaaaaaagtggtatttgcacggaaatcatatcaatagagagataatgtaaaaaataa 29634077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 46982831 - 46982918
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||  |||| |||||||| |||||||| ||| |||  ||||||||    
T  46982831 ttgacaactatattttacaaagaaaaaagtggtattagcacggaaataatagcaatagagatataaagtagaaagtaatatgagtatg 46982918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 54195483 - 54195396
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaa-aaaataaagtgagtat 87  Q
    |||||||  ||| |||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||| ||||||| ||||||||    
T  54195483 ttgacaaccataatttacaaagaaaaaagtgatattgacacgaaaactatagtaatagagagataaagtaaaaaaataatgtgagtat 54195396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 55013145 - 55013079
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaa 67  Q
    |||||||| |||||||||||||||||||||| ||||| |||||||||||||| |||| |||||||||    
T  55013145 ttgacaatcatattttacaaagaaaaaagtgatattgacacggaaaccatagcaataaagagataaa 55013079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 46984582 - 46984647
Alignment:
Q  23 aaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| |||||||  ||||||||    
T  46984582 aaaaaagtggtattggcacggaaaccataacaatagagagataaagtagaaaataatatgagtatg 46984647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39907474 - 39907561
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||| |||||||| || ||| |||||||| ||||| |||||||| |||||||||||||||| |||||||||    
T  39907474 ttgacaaccataatttacaaaaaaaaaagtagtgttgacacggaaatcatagcaatagagaaataaagtaaaaaataatgtgagtatg 39907561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 39697163 - 39697237
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||| || |||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  39697163 tttacaaagaaaaaattgatatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 39697237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 52937313 - 52937239
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||| ||||||| ||||  ||| || |||||||||||||||||||||||| ||| |||||||||    
T  52937313 tttacaaagaaaaaattggtatttgcacaaaaatcaaagtaatagagagataaagtaaaaagtaatgtgagtatg 52937239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 55400129 - 55400055
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| |||||||||| ||||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  55400129 tttataaagaaaaaattggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 55400055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 21196254 - 21196180
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||   ||||| ||||| ||| || |||||||||||||||||||||||||||| || ||||||    
T  21196254 tttacaaagaaaaaatatgtatttgcacgaaaatcaaagtaatagagagataaagtaaaaaataatgtaagtatg 21196180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 24095347 - 24095421
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||   |||||| ||||| |||||| || |||||||| |||||||||||||||| |||||||||    
T  24095347 tttacaaagaaaaagtaggtatttgcacgaaaaccaaagcaatagagaaataaagtaaaaaataatgtgagtatg 24095421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 26996435 - 26996372
Alignment:
Q  23 aaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| |||||||| |||||||||||||| |||  |||||||||||||||||||| |||||||||    
T  26996435 aaaaaaatggtattgacacggaaaccatagcaat--agagataaagtaaaaaataatgtgagtatg 26996372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 37927146 - 37927220
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| ||||||||||  |||||| | |||||||||| || ||||||||||||||||||||||| | |||||||||    
T  37927146 tttataaagaaaaaataggtatttgtacggaaaccaaagcaatagagagataaagtaaaaaattatgtgagtatg 37927220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 46253752 - 46253678
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||   ||||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  46253752 tttacaaagaaaatgttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 46253678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 49761449 - 49761363
Alignment:
Q  2 tgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||| ||| |||| |||||||||   |||||| ||||  |||||| || ||||||||||||||||||||||||| |||||||||    
T  49761449 tgacaatcataatttataaagaaaaagtaggtatttgcacaaaaaccaaagcaatagagagataaagtaaaaaataatgtgagtatg 49761363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 24480382 - 24480463
Alignment:
Q  4 acaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagt 85  Q
    ||||| ||| ||||||||||||||   |||||| ||||  |||||| ||||||||| |||||||||||||||||| ||||||    
T  24480382 acaatcataatttacaaagaaaaagtaggtatttgcacaaaaaccaaagtaatagatagataaagtaaaaaataatgtgagt 24480463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 50638309 - 50638366
Alignment:
Q  31 ggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| |||||||||||| || ||||||||||||||||||||||| | |||||||||    
T  50638309 ggtatttgcacggaaaccaaagcaatagagagataaagtaaaaaattatgtgagtatg 50638366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 13934544 - 13934607
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 78  Q
    |||||||||||||| ||  |||||||||||||||||||  |||||||| ||||||||||||||||    
T  13934544 tttacaaagaaaaa-gtattattggcacggaaaccataacaatagagaaataaagtaaaaaataa 13934607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 24645486 - 24645412
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||  |||| | ||||| |||||| |  ||||||||||||||||||||| ||| |||||||||    
T  24645486 tttacaaagaaaaaataggtacttgcacgaaaaccaaaacaatagagagataaagtaaaaagtaatgtgagtatg 24645412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 37035491 - 37035541
Alignment:
Q  39 cacggaaaccatagtaatagagagataaagt-aaaaaataaagtgagtatg 88  Q
    ||||||||||| ||||||||||||||||||| ||||||||| |||||||||    
T  37035491 cacggaaaccaaagtaatagagagataaagtaaaaaaataatgtgagtatg 37035541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 46019592 - 46019518
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||| |  |||||| | ||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  46019592 tttacaaagaaaagataggtatttgtacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 46019518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 50206911 - 50206985
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  || |||| ||||| |||||| |  ||||||||||||||||||||| ||| |||||||||    
T  50206911 tttacaaagaaaaagttgatatttgcacgaaaaccaaaacaatagagagataaagtaaaaagtaatgtgagtatg 50206985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 51465855 - 51465929
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||||| ||||| ||| || || ||||||||||||||||||||| |||  ||||||||    
T  51465855 tttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatatgagtatg 51465929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 21195842 - 21195891
Alignment:
Q  25 aaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    |||||| |||||| |||||||| ||||| |||||||||||||||||||||    
T  21195842 aaaagtagtattgacacggaaatcatagcaatagagagataaagtaaaaa 21195891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 24482905 - 24482978
Alignment:
Q  15 ttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||  ||||||| ||||| |||||| |  |||| |||||||||||||||| ||| |||||||||    
T  24482905 ttacaaagaaaaagttggtatttgcacgaaaaccaaaacaatatagagataaagtaaaaagtaatgtgagtatg 24482978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 52485585 - 52485528
Alignment:
Q  32 gtattggcacggaaaccatagtaatagagagataaagtaaaaa-ataaagtgagtatg 88  Q
    ||||||||||| |||||| || ||||||||||||||||||||| |||| |||||||||    
T  52485585 gtattggcacgaaaaccaaagcaatagagagataaagtaaaaatataatgtgagtatg 52485528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 23770705 - 23770758
Alignment:
Q  33 tattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||| ||||||||||| ||||||||||||| ||||||||||  ||||||||||||    
T  23770705 tattgacacggaaaccaaagtaatagagagagaaagtaaaaa--aaagtgagtatg 23770758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 35201468 - 35201531
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagata 65  Q
    |||||||| ||| |||||||||||||| || |||||| |||| ||||||||| ||||||||||||    
T  35201468 ttgacaatcataatttacaaagaaaaa-gtagtattgacacgaaaaccatagcaatagagagata 35201531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 51973296 - 51973383
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| ||||||||||||||| | |||||| ||   ||||||||  |||||||||||||||| |||||||| || ||||||    
T  51973296 ttgacaaccataatttacaaagaaaaaaatagtattgacataaaaaccataacaatagagagataaagttaaaaataatgtaagtatg 51973383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 9753459 - 9753409
Alignment:
Q  24 aaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    |||| ||||||||| |||  |||||| ||||||||||||||||||||||||    
T  9753459 aaaatgtggtattgacacaaaaaccaaagtaatagagagataaagtaaaaa 9753409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 20080202 - 20080129
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| |||||||||   |||||| |||||||||||| |  ||||||||||||||||| ||||||| |||||||||    
T  20080202 tttataaagaaaaagtaggtatttgcacggaaaccaaaacaatagagagataaagta-aaaataatgtgagtatg 20080129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 31376711 - 31376780
Alignment:
Q  18 caaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||  ||||||| |||| ||| || || ||||||||||||||||||||||| | |||||||||    
T  31376711 caaagaaaaaataggtattg-cacgaaaatcaaagcaatagagagataaagtaaaaaattatgtgagtatg 31376780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 3953405 - 3953490
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| ||| |||| |||||||||  || |||| ||| | |||||| || |||||||||||| |||||||| ||| |||||||||    
T  3953405 gacaatcataatttataaagaaaaagttgatatttgcatgaaaaccaaagcaatagagagatagagtaaaaagtaatgtgagtatg 3953490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 34057883 - 34057968
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||| |||| |||| |||||||||  ||||| | ||||| ||| || || |||||| |||||||||||||| ||| |||||||||    
T  34057883 gacaactataatttataaagaaaaagttggtaattgcacgaaaaacaaagcaatagaaagataaagtaaaaagtaacgtgagtatg 34057968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 44813406 - 44813463
Alignment:
Q  32 gtattggcacggaaaccatagtaatagagagataaagtaaaaa-ataaagtgagtatg 88  Q
    |||||| |||| |||||| || ||||||||||||||||||||| |||| |||||||||    
T  44813406 gtattgacacgaaaaccaaagcaatagagagataaagtaaaaatataatgtgagtatg 44813463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 21005106 - 21005190
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 87  Q
    |||||| ||| |||| |||||||||  || |||| ||||| |||| | || ||| ||||||||||||||||| ||| ||||||||    
T  21005106 gacaatcataatttataaagaaaaagttgatatttgcacgaaaactaaagcaattgagagataaagtaaaaagtaacgtgagtat 21005190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 54694071 - 54694123
Alignment:
Q  31 ggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtga 83  Q
    |||||| ||||| ||| || || ||||||||||||||||||||||||| ||||    
T  54694071 ggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataacgtga 54694123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 46082049 - 46082136
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  46082049 ttgacaactatattttacaaagaaaaaagtggtattgacacggaaaccatagcaatagagagataaagtaaaaagtaatgtgagtatg 46082136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 756999 - 756912
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  756999 ttgacaaccatactttacaaagaaaaaaatggtattggcacggaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 756912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 902781 - 902694
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||| ||| |||||||||    
T  902781 ttgacaatcatattttacaaagaaaaaagtggtattagcacggaaatcatagcaatagagagataaagtaaaaagtaatgtgagtatg 902694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1852879 - 1852966
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||| |||||||||    
T  1852879 ttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagacaaagaaaaaaataatgtgagtatg 1852966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3024678 - 3024765
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| ||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||  ||||||||    
T  3024678 ttgacaatcatattttacaaagaaaaaattgatattggcacggaaaccatagcaatagagagataaagtaaaaaataatatgagtatg 3024765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 3603254 - 3603167
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||| |||||||||    
T  3603254 ttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaactaaaaagtaatgtgagtatg 3603167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20565046 - 20565133
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||| |||||||||    
T  20565046 ttgacaaccatattttacaaagaaaaaagtggtattgccacggaaaccatagtaatagagagataaagtaaagagtaatgtgagtatg 20565133  T

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Target: chr1; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 33024499 - 33024586
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  33024499 ttgacaaccatattttacaaagaaaaaagtgatattggcacggaaaccatagcaatagagagataaagaaaaaaataatgtgagtatg 33024586  T

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Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 38303616 - 38303703
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| | |||||||    
T  38303616 ttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatggcaatagagagataaagtaaaaaataatgcgagtatg 38303703  T

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Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 8411655 - 8411733
Alignment:
Q  10 atattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||| |||||||||    
T  8411655 atattttacaaagaaaaaagtggtattggcacggaaaccaaaacaatagagagataaagtaaaaaataatgtgagtatg 8411733  T

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Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 4514382 - 4514469
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  |||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||| |||| ||||    
T  4514382 ttgacaaacatattttacaaagaaaaaagtgatattggcacggaaaccatagcaatagaaagataaagtaaaaaataatgtgaatatg 4514469  T

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Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 7128261 - 7128174
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||| ||||    
T  7128261 ttgacaaccatactttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtagaaaataatgtgaatatg 7128174  T

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Target: chr1; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 46172346 - 46172422
Alignment:
Q  12 attttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| |||||||||| |||||||||    
T  46172346 attttacaaagaaaaaagtggtattggcacgaaaactatagcaatagagagataaaataaaaaataatgtgagtatg 46172422  T

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Target: chr1; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 9008368 - 9008281
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||||||||||||||||||||||  |||||||| | ||||||||||||||||||||||||| |||||||||    
T  9008368 ttgacaaccatactttacaaagaaaaaagtggtattggcatagaaaccatggcaatagagagataaagtaaaaaataatgtgagtatg 9008281  T

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Target: chr1; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 26837595 - 26837508
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  |||||||||||||||||||||||||||| ||| ||||| |||| ||||||||||||||||||||| ||| |||||||||    
T  26837595 ttgacaaccatattttacaaagaaaaaagtggtattgacacagaaactatagcaatagagagataaagtaaaaagtaacgtgagtatg 26837508  T

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Target: chr1; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 36779197 - 36779284
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| |||||||||||||||||||||| ||||| |||||||| ||||| ||||||||||||||||||||| ||| || ||||||    
T  36779197 ttgacaatcatattttacaaagaaaaaagtgatattgacacggaaatcatagcaatagagagataaagtaaaaagtaatgtaagtatg 36779284  T

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Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26585807 - 26585893
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 87  Q
    |||||||  ||| |||||||||||||||||||||||| |||||||||||||  ||||||| ||||||||||||||||| ||||||||    
T  26585807 ttgacaaccatactttacaaagaaaaaagtggtattgacacggaaaccataacaatagagcgataaagtaaaaaataatgtgagtat 26585893  T

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Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 21486268 - 21486332
Alignment:
Q  24 aaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  21486268 aaaaagtagtattggcacggaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 21486332  T

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Target: chr1; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 51191931 - 51191844
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||| ||||  ||||||||||||||||||||  ||| |||||||||    
T  51191931 ttgacaaccatattttacaaagaaaaaaatggtattggcacggaaagcataacaatagagagataaagtaaaatgtaatgtgagtatg 51191844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 47214337 - 47214264
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||| || ||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  47214337 tttacaaagaaaaa-gtagtattggcacggaaaccataacaatagagagataaagtaaaaaataatgtgagtatg 47214264  T

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Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 51286309 - 51286382
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||| || ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  51286309 tttacaaagaaaaa-gtagtattggcacggaaaccatagcaatagagagataaaataaaaaataatgtgagtatg 51286382  T

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Target: chr1; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 16987080 - 16986994
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||| | |||||||||||||| || |||||| |||||||| ||||| |||||| |||||||||||||||||| |||||||||    
T  16987080 ttgacaattaaaatttacaaagaaaaa-gtagtattgacacggaaatcatagcaatagaaagataaagtaaaaaataatgtgagtatg 16986994  T

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Target: chr1; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21340664 - 21340578
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||| ||||||| || ||||| |||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  21340664 ttgacaaccatattttacaa-gaaaaaaatgttattgacacggaaaccatagcaatagagagataaagtaaaaagtaatgtgagtatg 21340578  T

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Target: chr1; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 34008322 - 34008236
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||| || | |||||||||||||| || ||||||||| |||||||||||||||||  |||||||||||||||||| |||||||||    
T  34008322 ttgacaactaaaatttacaaagaaaaa-gtagtattggcatggaaaccatagtaatagtaagataaagtaaaaaataatgtgagtatg 34008236  T

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Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 36673660 - 36673746
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||||||||| || |||||| |||||||||||||| |||||||||||||||||||||||||  ||||||||    
T  36673660 ttgacaaccataatttacaaagaaaaa-gtagtattgacacggaaaccatagcaatagagagataaagtaaaaaataacatgagtatg 36673746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 32319251 - 32319324
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||| || |||||| |||||||||||||||||||||||||| |||| |||||||| |||||||||    
T  32319251 tttacaaagaaaaa-gtagtattgacacggaaaccatagtaatagagagatgaagtgaaaaataatgtgagtatg 32319324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 50781500 - 50781585
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| ||| |||| |||||||||| ||||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  50781500 gacaatcataatttataaagaaaaaattggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 50781585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 1790651 - 1790564
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||| || |||||||||||||||| ||  ||||||| ||||||||||||| |||  ||||||||    
T  1790651 ttgacaaccatattttacaaagaaaaaaatgatattggcacggaaaccttatcaatagagggataaagtaaaaagtaatttgagtatg 1790564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 13489792 - 13489718
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  13489792 tttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 13489718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 50328082 - 50328156
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  50328082 tttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaacgtgagtatg 50328156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 52362612 - 52362538
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| |||||||||  ||||||| ||||| |||||| || ||||||||||||||||||||||||| |||||||||    
T  52362612 tttataaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaaataatgtgagtatg 52362538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 32915003 - 32915087
Alignment:
Q  4 acaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||| ||| ||||||||||||||  ||||||| ||||| |||||| |  ||||||||||||||||||||| ||| |||||||||    
T  32915003 acaatcataatttacaaagaaaaagttggtatttgcacgaaaaccaaaacaatagagagataaagtaaaaagtaatgtgagtatg 32915087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 29586095 - 29586049
Alignment:
Q  42 ggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||    
T  29586095 ggaaaccataataatagagagataaagtaaaaaataatgtgagtatg 29586049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 40316885 - 40316959
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| |||||||||  ||||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  40316885 tttataaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 40316959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 44632657 - 44632584
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||| || | |||| ||||||| | |||| ||||||||||||||||||||||||| |||||||||    
T  44632657 tttacaaagaaaaa-gtagcattgacacggaatctatagcaatagagagataaagtaaaaaataatgtgagtatg 44632584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 34040439 - 34040515
Alignment:
Q  14 tttacaaagaaaaaagtggtat--tggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||||  | ||||| ||| || |||||||||||||||||||||||||||| |||||||||    
T  34040439 tttacaaagaaaaagttggtatatttgcacgaaaatcaaagtaatagagagataaagtaaaaaataatgtgagtatg 34040515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 34254281 - 34254366
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||| |||| ||||||||||||||  | ||||| ||||| |||||| || |||| |||||||||||||||| ||| |||||||||    
T  34254281 gacaactataatttacaaagaaaaagtttgtatttgcacgaaaaccaaagcaataaagagataaagtaaaaagtaatgtgagtatg 34254366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 50882039 - 50882115
Alignment:
Q  2 tgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 78  Q
    ||||||| ||| |||| ||||||||||   ||||| ||||| ||| || ||||||||||||||||||||||||||||    
T  50882039 tgacaatcataatttataaagaaaaaatgagtatttgcacgaaaatcaaagtaatagagagataaagtaaaaaataa 50882115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 19969490 - 19969577
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||||||||   ||||||  ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  19969490 ttgacaaccataatttacaaagaaaacgttggtatgtgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 19969577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 10889987 - 10890061
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||||  ||||| ||| || || ||||||||||||||||||||| ||| |||||||||    
T  10889987 tttacaaagaaaaagttggtatgtgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatg 10890061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 15015528 - 15015454
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||||| ||||| |||||| |  |||||||| |||||||||||||||| || ||||||    
T  15015528 tttacaaagaaaaagttggtatttgcacgaaaaccaaaacaatagagatataaagtaaaaaataatgtaagtatg 15015454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 48220089 - 48220159
Alignment:
Q  18 caaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||  ||||||| ||||  ||| || || ||||||||||||||||||||||||| |||||||||    
T  48220089 caaagaaaaagttggtatttgcacaaaaatcaaagaaatagagagataaagtaaaaaataatgtgagtatg 48220159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 50824871 - 50824797
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||   ||||||| || | |||||| || |||||||||||||||||||||||||  ||||||||    
T  50824871 tttacaaagaaaaagtaggtattgacatgaaaaccaaagcaatagagagataaagtaaaaaataatatgagtatg 50824797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 52714842 - 52714916
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||| | ||||| |||||| |  ||||||||||||||||||||| ||| |||||||||    
T  52714842 tttacaaagaaaaagttggtaattgcacgaaaaccaaaacaatagagagataaagtaaaaagtaacgtgagtatg 52714916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 46543373 - 46543457
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||| |||| ||| |||||  || |||| ||||| |||||| || ||||||||||||||||||||||||  |||||||||    
T  46543373 gacaattataatttaaaaa-aaaaagttgatatttgcacgaaaaccaaagcaatagagagataaagtaaaaaatagtgtgagtatg 46543457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 3226001 - 3226073
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagta 86  Q
    |||||||||||||||    |||| | ||| |||||| || ||||||||||||||||||||||||| |||||||    
T  3226001 tttacaaagaaaaaatatatatttgtacgaaaaccaaagcaatagagagataaagtaaaaaataatgtgagta 3226073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 24673195 - 24673132
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 78  Q
    ||||||||||||||| | |||||| ||||||||| | || |||||||||||||| ||||||||||    
T  24673195 tttacaaagaaaaaa-tagtattgacacggaaactagagcaatagagagataaactaaaaaataa 24673132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 35539202 - 35539278
Alignment:
Q  2 tgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 78  Q
    |||||| |||| ||||||||||||||    ||||| |||||||||||| |  || ||||||||||||||||||||||    
T  35539202 tgacaaatataatttacaaagaaaaagtatgtatttgcacggaaaccaaaacaacagagagataaagtaaaaaataa 35539278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 38713712 - 38713636
Alignment:
Q  2 tgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 78  Q
    ||||||| ||| |||| ||||||||||  |||||| ||||| ||| || || |||| ||||||||||||||||||||    
T  38713712 tgacaatcataatttataaagaaaaaatgggtatttgcacgaaaatcaaagcaataaagagataaagtaaaaaataa 38713636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 4469358 - 4469433
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 78  Q
    |||||| ||| |||||||||||||||   |||||  ||| ||||||| || ||| |||||||||||||||||||||    
T  4469358 gacaatcataatttacaaagaaaaaatatgtatttacacagaaaccaaagcaattgagagataaagtaaaaaataa 4469433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 37178824 - 37178769
Alignment:
Q  23 aaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataa 78  Q
    ||||||||||||||| |||||||||||||| |||| |||| ||||  |||||||||    
T  37178824 aaaaaagtggtattgacacggaaaccatagcaataaagagctaaataaaaaaataa 37178769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 8200181 - 8200131
Alignment:
Q  38 gcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||| |||||| || ||||||| ||||||||||||||||| |||||||||    
T  8200181 gcacgaaaaccaaagcaatagagggataaagtaaaaaataatgtgagtatg 8200131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 35136974 - 35136900
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  | ||||| ||||  ||| || || ||||||||||||||||||||| ||| |||||||||    
T  35136974 tttacaaagaaaaagtttgtatttgcacaaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatg 35136900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 36577353 - 36577427
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||| |||||||||  ||||||| ||||| ||| || || |||| |||||||||||||||| ||| |||||||||    
T  36577353 tttataaagaaaaagttggtatttgcacgaaaatcaaagcaataaagagataaagtaaaaagtaatgtgagtatg 36577427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 37588617 - 37588690
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||| | || ||||| |||| ||| || || ||||||||||||||||||||||| | |||||||||    
T  37588617 tttacaaagaaaatattgatattg-cacgaaaatcaaagcaatagagagataaagtaaaaaattatgtgagtatg 37588690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 44789089 - 44789158
Alignment:
Q  18 caaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||  ||||||| |||| ||| || || ||||||||||||||||||||||| | |||||||||    
T  44789089 caaagaaaaaataggtattg-cacgaaaatcaaagcaatagagagataaagtaaaaaatgatgtgagtatg 44789158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 46911418 - 46911349
Alignment:
Q  18 caaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||  ||||||| |||| ||| || || ||||||||||||||||||||||| | |||||||||    
T  46911418 caaagaaaaaataggtattg-cacgaaaatcaaagcaatagagagataaagtaaaaaatgatgtgagtatg 46911349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 47721539 - 47721465
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||    |||||| |||| ||| || || ||||||||||||||||||||||||| |||| ||||    
T  47721539 tttacaaagaaaaagtaagtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgaatatg 47721465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 47728531 - 47728457
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||    |||||| |||| ||| || || ||||||||||||||||||||||||| |||| ||||    
T  47728531 tttacaaagaaaaagtaagtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgaatatg 47728457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 49241435 - 49241520
Alignment:
Q  3 gacaattatattttacaaagaaaaaagt-ggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| ||| |||||||| | |||||| |||||| ||||| ||||||  | |||||| |||||||||||||||||| |||||||||    
T  49241435 gacaatcataatttacaaa-agaaaagtaggtatttgcacgaaaaccaatgcaatagacagataaagtaaaaaataatgtgagtatg 49241520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 49660285 - 49660235
Alignment:
Q  39 cacggaaaccatagtaatagagagataaagtaa-aaaataaagtgagtatg 88  Q
    ||||||||||| ||||||||||||| ||||||| ||||||| |||||||||    
T  49660285 cacggaaaccaaagtaatagagagagaaagtaaaaaaataatgtgagtatg 49660235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 8447878 - 8447793
Alignment:
Q  2 tgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 87  Q
    ||||||| ||| ||||||||||||||  || |||| ||||  |||| | |  ||||||||||||||||||||||| | ||||||||    
T  8447878 tgacaatcataatttacaaagaaaaagttgatatttgcacaaaaactaaaacaatagagagataaagtaaaaaatgatgtgagtat 8447793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 88
Target Start/End: Original strand, 33054070 - 33054103
Alignment:
Q  55 atagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||||||||||| |||||||||    
T  33054070 atagagagataaagtaaaaaataatgtgagtatg 33054103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 48326098 - 48326037
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaa 75  Q
    ||||||||||||||  ||||||| | ||| ||| || || ||||||||||||||||||||||    
T  48326098 tttacaaagaaaaagttggtatttgtacgaaaatcaaagcaatagagagataaagtaaaaaa 48326037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 48624966 - 48624933
Alignment:
Q  54 aatagagagataaagtaaaaaataaagtgagtat 87  Q
    ||||||||||||||||||||||||| ||||||||    
T  48624966 aatagagagataaagtaaaaaataatgtgagtat 48624933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 50242423 - 50242382
Alignment:
Q  32 gtattggcacggaaaccatagtaatagagagataaagtaaaa 73  Q
    ||||||||||| |||||| ||||||||||||| |||||||||    
T  50242423 gtattggcacgaaaaccaaagtaatagagagagaaagtaaaa 50242382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41507122 - 41507210
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaa-aaaataaagtgagtatg 88  Q
    ||||||| |||| ||||||||||||||   ||||||| || | |||||| | ||||||| ||||||||||| || |||| |||||||||    
T  41507122 ttgacaactataatttacaaagaaaaagtaggtattgacatgaaaaccaaaataatagatagataaagtaagaacataatgtgagtatg 41507210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 48261259 - 48261195
Alignment:
Q  25 aaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa-ataaagtgagtatg 88  Q
    ||||| |||||||||||  |||||| || |||||||||| |||||||||| |||| |||||||||    
T  48261259 aaaagaggtattggcacaaaaaccaaagcaatagagagagaaagtaaaaacataatgtgagtatg 48261195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 3610898 - 3610976
Alignment:
Q  10 atattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  3610898 atattttacaaagaaaaaagtggtattgacacggaaaccatagcaatagagagataaagtaaaaagtaatgtgagtatg 3610976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 11547470 - 11547544
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  11547470 tttacaaagaaaaaagtggtattgacacggaaaccatagcaatagagagataaagtaaaaaataatgtgagtatg 11547544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 2075379 - 2075466
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||| |||||||||    
T  2075379 ttgacaaccataatttacaaagaaaaaagtggtattggcacggaaactataacaatagagagataaagtaaaaaataatgtgagtatg 2075466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 2777245 - 2777331
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||| ||| |||||||||    
T  2777245 ttgacaattatattttacaaagaaaaaagtgatattagcacggaaaccatagcaatagagagat-aagtaaaaagtaatgtgagtatg 2777331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 34504163 - 34504076
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| ||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||| ||| |||||||||    
T  34504163 ttgacaatcatattttacaaagaaaaaattggtattgacacggaaaccatagcaatagagagataaagtgaaaagtaatgtgagtatg 34504076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 14986672 - 14986746
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaa 75  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  14986672 ttgacaatcatactttacaaagaaaaaagtggtattggcacggaaaccatagcaataaagagataaagtaaaaaa 14986746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 30036722 - 30036797
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaat 76  Q
    |||||||| ||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||    
T  30036722 ttgacaatcatactttacaaagaaaaaaatggtattggcacggaaaccatagcattagagagataaagtaaaaaat 30036797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 4820387 - 4820307
Alignment:
Q  10 atattttacaaagaaaaaagtggtattggcacggaaacc--atagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||||||||||||||||||| |||||  |||  ||||||||||||||||||||||||| |||||||||    
T  4820387 atattttacaaagaaaaaagtggtattggcacgaaaaccatataacaatagagagataaagtaaaaaataatgtgagtatg 4820307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 5327519 - 5327593
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaa 75  Q
    |||||||  ||| |||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||    
T  5327519 ttgacaaccatactttacaaagaaaaaagtggtattgacacggaaaccatagcaagagagagataaagtaaaaaa 5327593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 335204 - 335119
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| ||| ||||||||||||||||| ||||||||||||||||||||| |||  ||||||||||| ||||||||  ||||||||    
T  335204 ttgacaatcataatttacaaagaaaaaagtagtattggcacggaaaccatagcaat--agagataaagttaaaaataatatgagtatg 335119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 30152458 - 30152545
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||| |||||| ||||||||| ||||||||||||| | ||||||||||||||||||||| | |||||||||    
T  30152458 ttgacaaccatactttacaaataaaaaaatggtattggtacggaaaccatagcattagagagataaagtaaaaaattatgtgagtatg 30152545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 14693181 - 14693266
Alignment:
Q  2 tgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 87  Q
    |||||| |||| ||||||||||||||   |||||| |||||||||||| || || |||||||||||||||||||||| ||||||||    
T  14693181 tgacaaatataatttacaaagaaaaagtaggtatttgcacggaaaccaaagcaacagagagataaagtaaaaaataatgtgagtat 14693266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 35213491 - 35213576
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| ||| ||||||||||||||  ||||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  35213491 gacaatcataatttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 35213576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 13658974 - 13658888
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||||||||| || |||||| |||||||||||||  ||||||||||| ||||||||||||| |||||||||    
T  13658974 ttgacaaccataatttacaaagaaaaa-gtagtattgacacggaaaccatatcaatagagagatcaagtaaaaaataatgtgagtatg 13658888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 754379 - 754453
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  754379 tttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 754453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 3199102 - 3199016
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| ||| |||| ||||||||| || |||||| |||||||||||||| |||| ||||||||| | |||||||| |||||||||    
T  3199102 ttgacaatcataatttataaagaaaaa-gtagtattgacacggaaaccatagcaatatagagataaaatgaaaaataatgtgagtatg 3199016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22341103 - 22341189
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||| |||||||||||||| || |||| |  ||||||||||||| ||||||||||||||||||||||| | |||||||||    
T  22341103 ttgacaacaataatttacaaagaaaaa-gtagtatagagacggaaaccatagcaatagagagataaagtaaaaaatgatgtgagtatg 22341189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 14699605 - 14699679
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||   |||||| ||||| |||||| || || |||||||||||||||||||||| |||||||||    
T  14699605 tttacaaagaaaaagtaggtatttgcacgaaaaccaaagcaacagagagataaagtaaaaaataatgtgagtatg 14699679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 32459457 - 32459518
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaa 75  Q
    ||||||||||||||  ||||||| ||||| |||||| || ||||||||||||||||||||||    
T  32459457 tttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaaa 32459518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 13143323 - 13143397
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  | ||||| ||||| ||| || || ||||||||||||||||||||| ||| |||||||||    
T  13143323 tttacaaagaaaaagtttgtatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatg 13143397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 20822825 - 20822883
Alignment:
Q  30 tggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  20822825 tggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatg 20822883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 1369490 - 1369430
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    ||||||||||||||  ||||||| ||||| ||| || || |||||||||||||||||||||    
T  1369490 tttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaa 1369430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 6531163 - 6531198
Alignment:
Q  53 taatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||||||||||||||||| |||||||||    
T  6531163 taatagagagataaagtaaaaaataatgtgagtatg 6531198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 10335656 - 10335606
Alignment:
Q  39 cacggaaaccatagtaatagagagataaagtaa-aaaataaagtgagtatg 88  Q
    ||||||||||| ||||||||||||| ||||||| ||||||| |||||||||    
T  10335656 cacggaaaccaaagtaatagagagagaaagtaaaaaaataatgtgagtatg 10335606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 18141242 - 18141316
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||| ||  ||||||  ||||| ||| || || ||||||||||||||||||||| ||| |||||||||    
T  18141242 tttacaaagaataagttggtatgtgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatg 18141316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 32046788 - 32046754
Alignment:
Q  54 aatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||||||||||| |||||||||    
T  32046788 aatagagagataaagtaaaaaataatgtgagtatg 32046754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 33421885 - 33421816
Alignment:
Q  18 caaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||||||  ||||||| |||| ||| || || ||||||||||||||||||||||| | |||||||||    
T  33421885 caaagaaaaaataggtattg-cacgaaaatcaaagcaatagagagataaagtaaaaaatgatgtgagtatg 33421816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 23628470 - 23628429
Alignment:
Q  33 tattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    |||| |||||||||||| | ||||||||||||||||||||||    
T  23628470 tatttgcacggaaaccaaaataatagagagataaagtaaaaa 23628429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 24842480 - 24842424
Alignment:
Q  31 ggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||| |||||||||||| |  ||||||||||||||||| ||||||| |||||||||    
T  24842480 ggtatttgcacggaaaccaaaaaaatagagagataaagta-aaaataatgtgagtatg 24842424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 26832758 - 26832702
Alignment:
Q  32 gtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||| ||||| |||||| |  ||||||||||||||||||||||| | |||||||||    
T  26832758 gtatttgcacgaaaaccaaaacaatagagagataaagtaaaaaatgatgtgagtatg 26832702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 150 - 63
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  ||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| ||| |||||||||    
T  150 ttgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccataacaatagagagataaagtaaaaagtaatgtgagtatg 63  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 122973 - 122887
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||  |||||||||||| |||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| || ||||||    
T  122973 ttgacaaccatattttacaaa-aaaaaattggtattggcacggaaaccatagcaatagagaaataaagtaaaaaataatgtaagtatg 122887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 9346 - 9260
Alignment:
Q  1 ttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtat 87  Q
    |||||||  |||||||| ||||||||||||||||||||||||||||  |||| ||||||||||||||||||||| |||  |||||||    
T  9346 ttgacaaccatattttataaagaaaaaagtggtattggcacggaaattatagcaatagagagataaagtaaaaagtaatatgagtat 9260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 19770 - 19692
Alignment:
Q  10 atattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||||||||||||||||  || |||||||||| ||||| ||||||||||||| | ||| |||||||||    
T  19770 atattttacaaagaaaaaagtggtattgatacagaaaccatagaaatagggagataaagtaaagagtaatgtgagtatg 19692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 38566 - 38481
Alignment:
Q  3 gacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||| |||| ||||||||||||||  ||||||| ||||| |||||| || ||||||||||||||||||||| ||| |||||||||    
T  38566 gacaactataatttacaaagaaaaagttggtattcgcacgaaaaccaaagcaatagagagataaagtaaaaagtaacgtgagtatg 38481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2341 - 2253
Alignment:
Q  1 ttgacaattatattttacaaagaaaa-aagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| ||| |||| ||| |||| || |||||||| |||||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  2341 ttgacaatcatactttataaaaaaaataaatggtattgacacggaaaccatagcaatagagagataaagtaaaaaataatgtgactatg 2253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 11106 - 11020
Alignment:
Q  2 tgacaattatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||| ||| ||||||||||||||   |||||| ||||| ||| || |  ||||||||||||||||||||||||| |||||||||    
T  11106 tgacaatcataatttacaaagaaaaagtgggtatttgcacgaaaatcaaaacaatagagagataaagtaaaaaataatgtgagtatg 11020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 23210 - 23132
Alignment:
Q  10 atattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    |||||||| ||||||||||||  |||||||||| |||| |||| |||| | |||||||||||||||||| |||| ||||    
T  23210 atattttataaagaaaaaagtaatattggcacgaaaactatagcaatataaagataaagtaaaaaataatgtgaatatg 23132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 134245 - 134318
Alignment:
Q  15 ttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||||||  ||||||| |||| |||||| |  |||| |||||||||||||||||||| |||||||||    
T  134245 ttacaaagaaaaaataggtattgacacgaaaaccaaaacaataaagagataaagtaaaaaataatgtgagtatg 134318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1956 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1956
Description:

Target: scaffold1956; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 900 - 825
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaa-aaaataaagtgagtatg 88  Q
    |||||||||||||||  | |||| ||||| |||||| | ||||||||||||||||||| ||||||| |||||||||    
T  900 tttacaaagaaaaaatggatatttgcacgaaaaccaaaataatagagagataaagtaaaaaaataacgtgagtatg 825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0416 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 6963 - 6914
Alignment:
Q  39 cacggaaaccatagtaatagagagataaagtaaaaaataaagtgagtatg 88  Q
    ||||||||||| | ||||||||||| |||||||||||||| |||||||||    
T  6963 cacggaaaccaaattaatagagagagaaagtaaaaaataatgtgagtatg 6914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 12062 - 11993
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataaagtga 83  Q
    ||||||||||||||  ||||||  ||||| |||||| |  ||||||||||||||||||||| ||| ||||    
T  12062 tttacaaagaaaaagttggtatgtgcacgaaaaccaaaacaatagagagataaagtaaaaagtaatgtga 11993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 8344 - 8284
Alignment:
Q  14 tttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaa 74  Q
    ||||||||||||||  || |||| ||||| |||||| || ||||||| |||||||||||||    
T  8344 tttacaaagaaaaagttgatatttgcacgaaaaccaaagcaatagagggataaagtaaaaa 8284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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