View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9264A_low_413 (Length: 241)
Name: NF9264A_low_413
Description: NF9264A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9264A_low_413 |
 | |
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| [»] scaffold0319 (1 HSPs) |
| | |
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| [»] scaffold0022 (1 HSPs) |
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| [»] scaffold0130 (1 HSPs) |
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| [»] scaffold0016 (2 HSPs) |
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| [»] scaffold0040 (1 HSPs) |
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| [»] scaffold0241 (1 HSPs) |
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| [»] scaffold0108 (1 HSPs) |
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| [»] scaffold0001 (1 HSPs) |
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| [»] scaffold0282 (1 HSPs) |
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| [»] scaffold0005 (1 HSPs) |
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| [»] scaffold0064 (1 HSPs) |
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| [»] scaffold0656 (1 HSPs) |
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| [»] scaffold0026 (1 HSPs) |
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| [»] scaffold0023 (2 HSPs) |
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| [»] scaffold0019 (1 HSPs) |
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| [»] scaffold0107 (1 HSPs) |
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| [»] scaffold0013 (4 HSPs) |
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| [»] scaffold0046 (1 HSPs) |
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| [»] scaffold0362 (1 HSPs) |
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| [»] scaffold0053 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 145; Significance: 2e-76; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 1735489 - 1735317
Alignment:
| Q |
26 |
tccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctt |
125 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
1735489 |
tccacaggcaagatggaaaccacattacagactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcgtcttcttttgaatgatctt |
1735390 |
T |
|
| Q |
126 |
tcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctg |
198 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
1735389 |
tcttcagaattgacaatgggggtgaaattcgttctgttgctggcttcttaaccatctcgaacacagctttctg |
1735317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 26 - 231
Target Start/End: Original strand, 17422857 - 17423062
Alignment:
| Q |
26 |
tccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctt |
125 |
Q |
| |
|
|||||||| | ||| ||||||||||||||||||||||| || || ||||||||| |||||||||| ||||||||||||||||| ||||||| |||||||| |
|
|
| T |
17422857 |
tccacaggtaggatagaaaccacattgcaaactatgtcgaggctcgggtcagatcccgtgaaattcgaagtcatctcctcatcctctttgggatgatctt |
17422956 |
T |
|
| Q |
126 |
tcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggt |
225 |
Q |
| |
|
|||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||| |||||| |
|
|
| T |
17422957 |
tcttcaagattgacaatgggggtgagattctctctgttgctggtttcttaaccatttcgaacacctctttctgcttatcctccgttttgtcaacattggt |
17423056 |
T |
|
| Q |
226 |
gatgtc |
231 |
Q |
| |
|
|||||| |
|
|
| T |
17423057 |
gatgtc |
17423062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 28 - 231
Target Start/End: Original strand, 22348769 - 22348972
Alignment:
| Q |
28 |
cacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttc |
127 |
Q |
| |
|
|||||| | ||| |||||||||||||| || || |||||||| ||||||||| | |||||||||||||||| || ||||| ||||||| |||||||||| |
|
|
| T |
22348769 |
cacaggtaggatcgaaaccacattgcatacgatatcaagactggggtcagatccaatgaaatttgaagtcatttcttcatcctctttgggatgatctttc |
22348868 |
T |
|
| Q |
128 |
ttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtga |
227 |
Q |
| |
|
|| | |||||||||||||||||| |||| |||| |||||||||| |||||||||||||||||| ||||||||||||| | ||||||||| |||||||| |
|
|
| T |
22348869 |
tttaaaattgacaatgggggtgagattctctctattgctggttttttaaccatttcgaacacaactttctgcttgcctttccctttgtcaacattggtga |
22348968 |
T |
|
| Q |
228 |
tgtc |
231 |
Q |
| |
|
|||| |
|
|
| T |
22348969 |
tgtc |
22348972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 142; Significance: 1e-74; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 26 - 231
Target Start/End: Original strand, 14693229 - 14693434
Alignment:
| Q |
26 |
tccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctt |
125 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||| |
|
|
| T |
14693229 |
tccacaggcaagatagaaaccacattgcaaactatgtcgaggtttgggtcagattccgtgaaatttgaagtcatctccttatcctctttggaatggtctt |
14693328 |
T |
|
| Q |
126 |
tcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggt |
225 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||| |||| ||||||||||||||| |
|
|
| T |
14693329 |
tcttcaagattgacaatgggggtgaaattctctctgttgctggttttttaaccatttcgaacacggctttctgcttgtcctccgttttgtcaatattggt |
14693428 |
T |
|
| Q |
226 |
gatgtc |
231 |
Q |
| |
|
|||||| |
|
|
| T |
14693429 |
gatgtc |
14693434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 207
Target Start/End: Complemental strand, 10782360 - 10782167
Alignment:
| Q |
14 |
tggacatcattatccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctt |
113 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| |
|
|
| T |
10782360 |
tggacatcatattccacaggcaaaatggaaaccacattacaaactatgtcaagacttgggtcagattctgtgaaattcgaagtcatttcctcatcttctt |
10782261 |
T |
|
| Q |
114 |
tggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctc |
207 |
Q |
| |
|
| | |||||||||| ||||||| ||||||||||| |||||||||||||||||||| ||||||||||| || |||||||||||||||||| |||| |
|
|
| T |
10782260 |
ttggatgatctttcatcagaatcgacaatgggggcgaaattcgctctgttgctggcttcttaaccatctcaaacacagctttctgcttgtcctc |
10782167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 41 - 228
Target Start/End: Complemental strand, 10150964 - 10150777
Alignment:
| Q |
41 |
gaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgaca |
140 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||||||| |||||||||||||| |||||||| |
|
|
| T |
10150964 |
gaaaccacattgcatactatgtcaagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgaca |
10150865 |
T |
|
| Q |
141 |
atgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgat |
228 |
Q |
| |
|
|||||||||| |||| |||||| ||||||| |||||||||||||||||| |||| ||||||||||| ||||||||| ||||||||| |
|
|
| T |
10150864 |
atgggggtgagattctctctgtgactggttttttaaccatttcgaacacatcttttcgcttgccctctcctttgtcaacattggtgat |
10150777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 30 - 219
Target Start/End: Original strand, 7401993 - 7402182
Alignment:
| Q |
30 |
caggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttctt |
129 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||| || ||||| |
|
|
| T |
7401993 |
caggcaggattgaaaccacattgcaaactatgtcgagactcgggtcacattccgtgaaatttgaagtcatctcctcatcctctttggaacaatacttctt |
7402092 |
T |
|
| Q |
130 |
cagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaat |
219 |
Q |
| |
|
|| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| || |||| | ||||||||| |
|
|
| T |
7402093 |
caaaattgacaatgggggtgaaattctttctgttgctgccttcttaaccatttcgaacacagctttctgtttatcctccattttgtcaat |
7402182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 41 - 201
Target Start/End: Original strand, 13306894 - 13307054
Alignment:
| Q |
41 |
gaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgaca |
140 |
Q |
| |
|
|||||||||||||||||||| || ||||| ||||||||| |||||||||| |||||||| || ||||| ||||||| |||||||||||||| |||||||| |
|
|
| T |
13306894 |
gaaaccacattgcaaactatatcgagactagggtcagatcccgtgaaattcgaagtcatatcttcatcctctttgggatgatctttcttcaaaattgaca |
13306993 |
T |
|
| Q |
141 |
atgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgctt |
201 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
13306994 |
atgggggtgagattctctctgttgctggtttcttaaccatttcgaacacagttttctgctt |
13307054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 138; Significance: 3e-72; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 18133578 - 18133743
Alignment:
| Q |
66 |
gacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgc |
165 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18133578 |
gacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaacgatctttcttcagaattgacaatgggggtgaaattcgctctgttgc |
18133677 |
T |
|
| Q |
166 |
tggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
231 |
Q |
| |
|
||||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
18133678 |
tggtttcttaaccatctcgaacacaactttttgcttgccctcccttttgtcaatattggtgatgtc |
18133743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 26 - 201
Target Start/End: Original strand, 14342659 - 14342834
Alignment:
| Q |
26 |
tccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctt |
125 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
14342659 |
tccacaggcaggattgaaaccacattgcaaactatgtcgaggctcgggtcagattccgtgaaatttgaagtcatctcctcatcctctttggaacaatctt |
14342758 |
T |
|
| Q |
126 |
tcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgctt |
201 |
Q |
| |
|
|||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14342759 |
tcttcaaaattgacaatgggggtgaaattctttttgttgctggtttcttaaccatttcgaacacagctttctgctt |
14342834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 41 - 226
Target Start/End: Original strand, 18171652 - 18171837
Alignment:
| Q |
41 |
gaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgaca |
140 |
Q |
| |
|
|||||||||||| | |||||||| ||||| ||||||||| | |||||||| |||||||| || ||||| || |||| |||||||||||||| ||||||| |
|
|
| T |
18171652 |
gaaaccacattgtacactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctccttgggatgatctttcttcaagattgaca |
18171751 |
T |
|
| Q |
141 |
atgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtg |
226 |
Q |
| |
|
||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| |
|
|
| T |
18171752 |
atgggggcgaaattctttctgttgctggttttttaaccatttcgaacacagctttctgcttaccctctcctttgtcaacattggtg |
18171837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 26 - 231
Target Start/End: Complemental strand, 9831 - 9626
Alignment:
| Q |
26 |
tccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctt |
125 |
Q |
| |
|
|||||||| | ||| |||||||||||||| |||||||| ||||| ||||||||| | ||||||||||||||||| || ||||| ||||||| ||| |||| |
|
|
| T |
9831 |
tccacaggtaggatagaaaccacattgcatactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgttctt |
9732 |
T |
|
| Q |
126 |
tcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggt |
225 |
Q |
| |
|
|||| | |||||||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||||||| |||||| ||||||||| |||||| |
|
|
| T |
9731 |
tctttaaaattgacaatgggggtgagattctctctgttgctggctttttaaccatttcgaacacagctttctgcttaccctctcctttgtcaacattggt |
9632 |
T |
|
| Q |
226 |
gatgtc |
231 |
Q |
| |
|
|||||| |
|
|
| T |
9631 |
gatgtc |
9626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 41 - 231
Target Start/End: Complemental strand, 11537 - 11347
Alignment:
| Q |
41 |
gaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgaca |
140 |
Q |
| |
|
|||||||||||||| ||||||| ||||| ||||||||||| ||||||||||||||||| || ||||| ||||||| |||||||||||| | |||||||| |
|
|
| T |
11537 |
gaaaccacattgcatactatgttgagactagggtcagattcagtgaaatttgaagtcatttcttcatcctctttgggatgatctttctttaaaattgaca |
11438 |
T |
|
| Q |
141 |
atgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
231 |
Q |
| |
|
||||||| || |||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
11437 |
atgggggcgagattctctctgttgctggttttttaaccatttcgaacacagctttctgcttaccctctgttttgtcaacattggtgatgtc |
11347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 41 - 231
Target Start/End: Original strand, 23200647 - 23200837
Alignment:
| Q |
41 |
gaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgaca |
140 |
Q |
| |
|
|||||||||||||| ||||| || ||||| ||||||||| |||||||||| |||||||| || ||||| ||||||| |||||||||||||| |||||||| |
|
|
| T |
23200647 |
gaaaccacattgcacactatatcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgaca |
23200746 |
T |
|
| Q |
141 |
atgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
231 |
Q |
| |
|
||||||| || |||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
23200747 |
atgggggcgagattctctctgttgctggtttcttaaccatttcgaacacagccttctgcttaccctctgttttgtcaacattggtgatgtc |
23200837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 41 - 231
Target Start/End: Complemental strand, 22638494 - 22638304
Alignment:
| Q |
41 |
gaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgaca |
140 |
Q |
| |
|
|||||||||||||| |||||||| ||||| ||||||||| | |||||||| |||||||| || ||||| ||||||| |||||||||||||| |||||||| |
|
|
| T |
22638494 |
gaaaccacattgcacactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgaca |
22638395 |
T |
|
| Q |
141 |
atgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
231 |
Q |
| |
|
||||||| || |||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||| || ||||||||| |
|
|
| T |
22638394 |
atgggggcgagattctctctgttgctggtttcttaaccatttcgaacacagccttctgcttaccctctgttttatcaacatcggtgatgtc |
22638304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 41 - 231
Target Start/End: Original strand, 23626276 - 23626466
Alignment:
| Q |
41 |
gaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgaca |
140 |
Q |
| |
|
|||||||||||||| |||||||| ||||| ||||||||| | |||||||| |||||||| || |||| || |||| ||||||||| |||| ||||||| |
|
|
| T |
23626276 |
gaaaccacattgcacactatgtcgagactagggtcagatccagtgaaattcgaagtcatttctacatcctccttgggatgatcttttttcaatattgaca |
23626375 |
T |
|
| Q |
141 |
atgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
231 |
Q |
| |
|
||||||| || |||| |||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
23626376 |
atgggggcgagattctctctgttgctggtttcttaaccattttgaacacagctttctgcttaccctctgttttgtcaacattggtgatgtc |
23626466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 231
Target Start/End: Complemental strand, 24912070 - 24911884
Alignment:
| Q |
44 |
accacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatg |
143 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||||||| | ||||||||||||||||| || ||||| ||||||| ||| || ||||| | |||||||| | |
|
|
| T |
24912070 |
accacattgcatactatgtcgagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatggtccttctttaagattgacaa-g |
24911972 |
T |
|
| Q |
144 |
ggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
231 |
Q |
| |
|
|||||||||||| || |||||||||||| |||||||||||||| |||||| ||||||| || | |||||||||||||||||||||| |
|
|
| T |
24911971 |
ggggtgaaattctctttgttgctggttttttaaccatttcgaaaacagctctctgctttcctttccctttgtcaatattggtgatgtc |
24911884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 41 - 231
Target Start/End: Original strand, 13289385 - 13289575
Alignment:
| Q |
41 |
gaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgaca |
140 |
Q |
| |
|
|||||||||||||| |||||||| ||||| ||||||||| | |||||||| |||||||| || ||||| ||||||| |||||||||||| | |||||||| |
|
|
| T |
13289385 |
gaaaccacattgcatactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctctttgggatgatctttctttaaaattgaca |
13289484 |
T |
|
| Q |
141 |
atgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
231 |
Q |
| |
|
||||||| || |||| |||||||||||| || ||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| |
|
|
| T |
13289485 |
atgggggcgagattctctctgttgctggctttttaaccatttcgaacacagctttctgcttaccctctcctttgtcaacattggtgatgtc |
13289575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 26 - 231
Target Start/End: Original strand, 14772570 - 14772775
Alignment:
| Q |
26 |
tccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctt |
125 |
Q |
| |
|
|||||||| | ||| || ||||||||||| ||||| || ||||| ||||||||| | ||||||||||||||||| || ||||| ||||||| |||||||| |
|
|
| T |
14772570 |
tccacaggtaggatcgagaccacattgcatactatatcgagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgatctt |
14772669 |
T |
|
| Q |
126 |
tcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggt |
225 |
Q |
| |
|
|||| |||||||||||||||||||| |||| ||||||||||||||| |||||||||||||| |||||| |||| || || | ||||||||| |||||| |
|
|
| T |
14772670 |
tctttagaattgacaatgggggtgagattctctctgttgctggttttttaaccatttcgaatacagctctctgttttcctttccctttgtcaacattggt |
14772769 |
T |
|
| Q |
226 |
gatgtc |
231 |
Q |
| |
|
|||||| |
|
|
| T |
14772770 |
gatgtc |
14772775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 35 - 231
Target Start/End: Complemental strand, 23435287 - 23435091
Alignment:
| Q |
35 |
aagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaa |
134 |
Q |
| |
|
||||| |||||||||||||| |||||||| ||||| ||||||||| |||||||||| |||||||| || ||||| || |||| |||||||||||||| || |
|
|
| T |
23435287 |
aagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatcctccttgggatgatctttcttcaaaa |
23435188 |
T |
|
| Q |
135 |
ttgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
231 |
Q |
| |
|
||||||||||||| || |||| |||| ||||||||||||||||||||||||||||| | |||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
23435187 |
ttgacaatgggggcgagattctctctattgctggtttcttaaccatttcgaacacaaccttctgcttaccctctgttttgtcaacattggtgatgtc |
23435091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 26 - 231
Target Start/End: Original strand, 19035181 - 19035386
Alignment:
| Q |
26 |
tccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctt |
125 |
Q |
| |
|
|||||||| | ||| || ||||||||||| | || |||||||| ||||||||| | |||||||| |||||||| || ||||| | ||||| || || || |
|
|
| T |
19035181 |
tccacaggtaggatcgagaccacattgcatataatatcaagactggggtcagatccagtgaaattcgaagtcatttcttcatcctttttgggattatttt |
19035280 |
T |
|
| Q |
126 |
tcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggt |
225 |
Q |
| |
|
|||||| |||||||||||| | ||| |||| ||||||||||||||| ||||| |||||||||| |||||| |||||||||||| ||||||||| |||||| |
|
|
| T |
19035281 |
tcttcaaaattgacaatggagatgagattctctctgttgctggttttttaactatttcgaacatagctttttgcttgccctctcctttgtcaacattggt |
19035380 |
T |
|
| Q |
226 |
gatgtc |
231 |
Q |
| |
|
|||||| |
|
|
| T |
19035381 |
gatgtc |
19035386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0130 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0130
Description:
Target: scaffold0130; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 41 - 231
Target Start/End: Complemental strand, 43321 - 43131
Alignment:
| Q |
41 |
gaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgaca |
140 |
Q |
| |
|
|||||||||||||| |||||||| ||||| ||||||||| |||||||||| ||||||| || ||||| || |||| |||||||||||||| |||||||| |
|
|
| T |
43321 |
gaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcagttcttcatcctccttgggatgatctttcttcaaaattgaca |
43222 |
T |
|
| Q |
141 |
atgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
231 |
Q |
| |
|
||||||| || |||| |||||||||||||||||||||||||| |||||||||||||||||| |||||| ||| |||| |||||||||||| |
|
|
| T |
43221 |
atgggggcgagattctctctgttgctggtttcttaaccattttgaacacagctttctgcttaccctctgttttatcaacattggtgatgtc |
43131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 41 - 231
Target Start/End: Original strand, 126577 - 126767
Alignment:
| Q |
41 |
gaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgaca |
140 |
Q |
| |
|
|||||||||||||| ||||| || ||||| ||||||||| | |||||||| |||||||| || ||||| ||||||| |||||||||||||| |||||||| |
|
|
| T |
126577 |
gaaaccacattgcacactatatcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgaca |
126676 |
T |
|
| Q |
141 |
atgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
231 |
Q |
| |
|
||||||| || |||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||| || ||||||||| |
|
|
| T |
126677 |
atgggggcgagattctctctgttgctggtttcttaaccatttcgaacacagccttctgcttaccctctgttttatcaacatcggtgatgtc |
126767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 180
Target Start/End: Original strand, 179311 - 179447
Alignment:
| Q |
44 |
accacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatg |
143 |
Q |
| |
|
||||||||||| ||||| || | ||||||||||| | | |||||| || ||||| || ||||| ||||| | ||| |||||||||| ||||||||| | |
|
|
| T |
179311 |
accacattgcacactatatcgaagcttgggtcagacttggagaaattcgacgtcatttcttcatcctctttaggatggtctttcttcaaaattgacaaag |
179410 |
T |
|
| Q |
144 |
ggggtgaaattcgctctgttgctggtttcttaaccat |
180 |
Q |
| |
|
| || || |||| ||||| |||| ||| |||||||| |
|
|
| T |
179411 |
gaggggagattctttctgtggctgattttttaaccat |
179447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 41 - 231
Target Start/End: Complemental strand, 29798 - 29608
Alignment:
| Q |
41 |
gaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgaca |
140 |
Q |
| |
|
|||||||||||||| |||||||| || || ||||||||| | ||||||| ||| ||||| || ||||| ||||||| |||||||||||||| |||||||| |
|
|
| T |
29798 |
gaaaccacattgcatactatgtctaggctggggtcagatccggtgaaatctgaggtcatttcttcatcctctttgggatgatctttcttcaaaattgaca |
29699 |
T |
|
| Q |
141 |
atgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
231 |
Q |
| |
|
| |||||||| |||| |||| | |||||||| |||||||||||||||||| |||| |||||||||| | ||||||||||||||||||||| |
|
|
| T |
29698 |
acgggggtgagattctctctatggctggttttttaaccatttcgaacacatctttttgcttgccctttcttttgtcaatattggtgatgtc |
29608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 26 - 231
Target Start/End: Complemental strand, 11665 - 11460
Alignment:
| Q |
26 |
tccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctt |
125 |
Q |
| |
|
|||||||| | ||| || ||||||||||| || || |||||||| ||||||||| | ||||||||||||||||| || ||||| ||||||| |||||||| |
|
|
| T |
11665 |
tccacaggtaggattgagaccacattgcatacgatatcaagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgatctt |
11566 |
T |
|
| Q |
126 |
tcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggt |
225 |
Q |
| |
|
|||| | |||||||||||||||||| |||| ||||||||||||||| |||||||||||||| ||||||||||| || || | ||||||| | |||||| |
|
|
| T |
11565 |
tctttataattgacaatgggggtgagattctctctgttgctggttttttaaccatttcgaatacagctttctgttttcctttccctttgtctacattggt |
11466 |
T |
|
| Q |
226 |
gatgtc |
231 |
Q |
| |
|
|||||| |
|
|
| T |
11465 |
gatgtc |
11460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 26 - 231
Target Start/End: Complemental strand, 26399 - 26194
Alignment:
| Q |
26 |
tccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctt |
125 |
Q |
| |
|
|||||||| | |||||| ||||| ||||| |||||||| ||||| ||||||||| | |||||||| ||||||||||| ||||| || ||| | |||| |
|
|
| T |
26399 |
tccacaggtaggatggacaccacgttgcatactatgtcgagactagggtcagatccagtgaaattcgaagtcatctcttcatcctccttgagagagtctt |
26300 |
T |
|
| Q |
126 |
tcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggt |
225 |
Q |
| |
|
|||||| |||||||||||||||||| |||| |||||||||||| || |||||||||||||||||||||||||| || ||||| ||||||||| |||||| |
|
|
| T |
26299 |
tcttcaaaattgacaatgggggtgagattctctctgttgctggctttttaaccatttcgaacacagctttctgtttatcctctcctttgtcaacattggt |
26200 |
T |
|
| Q |
226 |
gatgtc |
231 |
Q |
| |
|
|||||| |
|
|
| T |
26199 |
gatgtc |
26194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 26 - 231
Target Start/End: Original strand, 126763 - 126968
Alignment:
| Q |
26 |
tccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctt |
125 |
Q |
| |
|
|||||||| | ||| || ||||||||||| || || |||||||| ||||||||| ||||||||||||||||||| || ||||| || |||| |||||||| |
|
|
| T |
126763 |
tccacaggtaggatcgagaccacattgcatacgatatcaagactggggtcagatcccgtgaaatttgaagtcatttcttcatcctcattgggatgatctt |
126862 |
T |
|
| Q |
126 |
tcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggt |
225 |
Q |
| |
|
|||| | |||| ||||||||||||| |||| |||||||| |||||| ||||||||||||||||| ||||||||||| |||| ||||||||| ||||| |
|
|
| T |
126863 |
tctttaaaattcacaatgggggtgagattctctctgttgttggttttttaaccatttcgaacaccgctttctgctttcccttccctttgtcaacattgga |
126962 |
T |
|
| Q |
226 |
gatgtc |
231 |
Q |
| |
|
|||||| |
|
|
| T |
126963 |
gatgtc |
126968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 26 - 231
Target Start/End: Original strand, 22805841 - 22806046
Alignment:
| Q |
26 |
tccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctt |
125 |
Q |
| |
|
|||||||| | ||| || ||||||||||| ||||| || ||| | ||||||||| | ||||||||||||||||| || ||||| ||||||| |||||||| |
|
|
| T |
22805841 |
tccacaggtaggattgagaccacattgcatactatatcgagattggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgatctt |
22805940 |
T |
|
| Q |
126 |
tcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggt |
225 |
Q |
| |
|
|||| |||||||||||||||||||| |||| ||||||||||||||| ||||||||||| || |||||| ||||||| || | ||||||||| |||||| |
|
|
| T |
22805941 |
tctttagaattgacaatgggggtgagattctctctgttgctggttttttaaccatttcaaatacagctctctgctttcctttccctttgtcaacattggt |
22806040 |
T |
|
| Q |
226 |
gatgtc |
231 |
Q |
| |
|
|||||| |
|
|
| T |
22806041 |
gatgtc |
22806046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 41380414 - 41380531
Alignment:
| Q |
114 |
tggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctacttt |
213 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| | || |
|
|
| T |
41380414 |
tggaatgatctttcttcaaaattgacaatgggggtgaaattcgctctgttgctggcttcttaaccatctcgaacacagctttctgcttgccctccatctt |
41380513 |
T |
|
| Q |
214 |
gtcaatattggtgatgtc |
231 |
Q |
| |
|
|||||| |||||| |||| |
|
|
| T |
41380514 |
gtcaatgttggtggtgtc |
41380531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 26 - 231
Target Start/End: Complemental strand, 21511181 - 21510976
Alignment:
| Q |
26 |
tccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctt |
125 |
Q |
| |
|
|||||| | ||||| || ||||||||||| | || |||||||| ||||||||| | ||||||||||||||||| || ||||| || |||| |||||||| |
|
|
| T |
21511181 |
tccacaagtaagatcgagaccacattgcatatgatatcaagactggggtcagatccagtgaaatttgaagtcatttcttcatcctccttgggatgatctt |
21511082 |
T |
|
| Q |
126 |
tcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggt |
225 |
Q |
| |
|
|||| | |||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| ||||||||||| || | ||||||||| ||||| |
|
|
| T |
21511081 |
tctttaaaattgacaatgggggtgagattctctctgttgctggttttttaaccatttcgaacaccgctttctgctttcctttccctttgtcaacattgga |
21510982 |
T |
|
| Q |
226 |
gatgtc |
231 |
Q |
| |
|
|||||| |
|
|
| T |
21510981 |
gatgtc |
21510976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0282 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0282
Description:
Target: scaffold0282; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 44 - 231
Target Start/End: Original strand, 5559 - 5746
Alignment:
| Q |
44 |
accacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatg |
143 |
Q |
| |
|
||||||||||| ||||| || ||||| ||||||||| | ||||||||||||||||| || ||||| ||||||| |||||||||||| ||||||||||||| |
|
|
| T |
5559 |
accacattgcatactatatcgagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgatctttctttagaattgacaatg |
5658 |
T |
|
| Q |
144 |
ggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
231 |
Q |
| |
|
||||||| |||| ||||||||||||||| | ||||||||| || ||| || ||||||| || | ||||||||| |||||||||||| |
|
|
| T |
5659 |
ggggtgagattctctctgttgctggtttttaaaccatttcaaatacaactctctgctttcctttccctttgtcaacattggtgatgtc |
5746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 26 - 231
Target Start/End: Complemental strand, 67160 - 66955
Alignment:
| Q |
26 |
tccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctt |
125 |
Q |
| |
|
|||||||| | ||| || ||||||||||| ||||| || ||||| ||||||||| | ||||||||||||||||| || ||||| ||||||| |||||||| |
|
|
| T |
67160 |
tccacaggtaggattgagaccacattgcatactatatcgagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgatctt |
67061 |
T |
|
| Q |
126 |
tcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggt |
225 |
Q |
| |
|
|||| |||||||||||||||||||| |||| ||||||||||||||| | ||||||||| || ||| || |||| || || | ||||||||| |||||| |
|
|
| T |
67060 |
tctttagaattgacaatgggggtgagattctctctgttgctggtttttaaaccatttcaaatacaactctctgatttcctttccctttgtcaacattggt |
66961 |
T |
|
| Q |
226 |
gatgtc |
231 |
Q |
| |
|
|||||| |
|
|
| T |
66960 |
gatgtc |
66955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 37596 - 37798
Alignment:
| Q |
26 |
tccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctt |
125 |
Q |
| |
|
|||||||| | ||| || ||||| || || |||||||| ||||| ||||||||| | |||||||| |||||||| || ||||| || |||| | |||| |
|
|
| T |
37596 |
tccacaggtaggatagacaccacgttacatactatgtcgagactagggtcagatccagtgaaattcgaagtcatatcttcatcctccttgggaaagtctt |
37695 |
T |
|
| Q |
126 |
tcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggt |
225 |
Q |
| |
|
|||||| ||||||||||||||||||||||| || ||||||||| || |||||||||||||||||||||||||| || ||||| ||||| ||| |||||| |
|
|
| T |
37696 |
tcttcaaaattgacaatgggggtgaaattctctatgttgctggctttttaaccatttcgaacacagctttctgtttaacctctcctttgacaaaattggt |
37795 |
T |
|
| Q |
226 |
gat |
228 |
Q |
| |
|
||| |
|
|
| T |
37796 |
gat |
37798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0656 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0656
Description:
Target: scaffold0656; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 44 - 231
Target Start/End: Complemental strand, 5214 - 5028
Alignment:
| Q |
44 |
accacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatg |
143 |
Q |
| |
|
||||||||||| |||||||| ||||| |||||||| | |||||||| |||||||| || ||||| || |||| ||| |||||||| | |||||||| | |
|
|
| T |
5214 |
accacattgcatactatgtcgagactgaggtcagatccagtgaaattcgaagtcatttcttcatcctccttgggatggtctttctttaagattgacaagg |
5115 |
T |
|
| Q |
144 |
ggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
231 |
Q |
| |
|
||||||| |||| |||||||||||| || |||||||||||||| |||||| | ||||| |||| | |||||||||||||||||||||| |
|
|
| T |
5114 |
ggggtgagattctctctgttgctggctttttaaccatttcgaaaacagctatttgctt-ccctttcctttgtcaatattggtgatgtc |
5028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 41 - 231
Target Start/End: Original strand, 138991 - 139181
Alignment:
| Q |
41 |
gaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgaca |
140 |
Q |
| |
|
|||||||||||||| |||||||| ||||| |||||||| | |||||||| |||||||| || ||||| ||||||| ||| |||||||| | ||||||| |
|
|
| T |
138991 |
gaaaccacattgcatactatgtcgagactagggtcagacccagtgaaattcgaagtcatttcttcatcctctttgggatggtctttctttaagattgaca |
139090 |
T |
|
| Q |
141 |
atgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
231 |
Q |
| |
|
| || ||||| || | || |||||||||||| |||||||||||||| |||||| ||||||| || | ||||||||| |||||||||||| |
|
|
| T |
139091 |
agggaggtgagatcctctttgttgctggttttttaaccatttcgaatacagctctctgctttcctttccctttgtcaacattggtgatgtc |
139181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 93 - 231
Target Start/End: Complemental strand, 65376 - 65238
Alignment:
| Q |
93 |
aagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagc |
192 |
Q |
| |
|
||||||| || ||||| ||||||| |||||||||||| | |||||||||||||||| | |||| ||||||||||||||| |||||||||||||||||| | |
|
|
| T |
65376 |
aagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggttagattctctctgttgctggttttttaaccatttcgaacacaac |
65277 |
T |
|
| Q |
193 |
tttctgcttgccctctactttgtcaatattggtgatgtc |
231 |
Q |
| |
|
||||||||| | | ||||||||| |||||||||||| |
|
|
| T |
65276 |
tttctgctttactttccctttgtcaacattggtgatgtc |
65238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 93 - 231
Target Start/End: Complemental strand, 74554 - 74416
Alignment:
| Q |
93 |
aagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagc |
192 |
Q |
| |
|
||||||| || ||||| ||||||| |||||||||||| | |||||||||||||||| | |||| ||||||||||||||| |||||||||||||||||| | |
|
|
| T |
74554 |
aagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggttagattctctctgttgctggttttttaaccatttcgaacacaac |
74455 |
T |
|
| Q |
193 |
tttctgcttgccctctactttgtcaatattggtgatgtc |
231 |
Q |
| |
|
||||||||| | | ||||||||| |||||||||||| |
|
|
| T |
74454 |
tttctgctttactttccctttgtcaacattggtgatgtc |
74416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 44 - 231
Target Start/End: Original strand, 159086 - 159273
Alignment:
| Q |
44 |
accacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatg |
143 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||||||| | |||||||| |||||||| || ||||| || |||| ||| | |||||||| ||||| || | |
|
|
| T |
159086 |
accacattgcatactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctccttgggatggtttttcttcaagattgataagg |
159185 |
T |
|
| Q |
144 |
ggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
231 |
Q |
| |
|
| ||||| |||| ||||||||||| || ||||||||||| || || ||||||||||| || | |||||||||||||||||||||| |
|
|
| T |
159186 |
gcggtgagattctttctgttgctggctttttaaccatttcaaaaacggctttctgcttccctttccctttgtcaatattggtgatgtc |
159273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 1992 - 1844
Alignment:
| Q |
83 |
gtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccattt |
182 |
Q |
| |
|
|||||||| |||||||| || ||||| | |||| ||| |||||||| | |||||||| |||||||| |||| ||||||||||||||| |||||||||| |
|
|
| T |
1992 |
gtgaaattcgaagtcatttcttcatcctacttgggatggtctttctttaagattgacaaggggggtgagattctctctgttgctggttttttaaccattt |
1893 |
T |
|
| Q |
183 |
cgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
231 |
Q |
| |
|
|||| |||||| ||||||| || | ||||||||| |||||||||||| |
|
|
| T |
1892 |
cgaaaacagctctctgctttcctttccctttgtcaacattggtgatgtc |
1844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 45; Significance: 9e-17; HSPs: 4)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 180
Target Start/End: Complemental strand, 75541 - 75405
Alignment:
| Q |
44 |
accacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatg |
143 |
Q |
| |
|
||||||||||| ||||| || ||||||| ||||||||| ||||||||||| ||||| || ||||| ||||| | ||| |||||||||| |||||| || | |
|
|
| T |
75541 |
accacattgcatactatatcgagacttgagtcagattctgtgaaatttgacgtcatttcttcatcctctttaggatggtctttcttcaaaattgataaag |
75442 |
T |
|
| Q |
144 |
ggggtgaaattcgctctgttgctggtttcttaaccat |
180 |
Q |
| |
|
| || || |||| || || |||||||| |||||||| |
|
|
| T |
75441 |
gaggggagattctttccgtggctggttttttaaccat |
75405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 138
Target Start/End: Complemental strand, 83970 - 83876
Alignment:
| Q |
44 |
accacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattga |
138 |
Q |
| |
|
||||||||||| ||||| || ||||||||||||||||| ||||||||||| ||||| | ||||| ||||| | ||| |||||||||| |||||| |
|
|
| T |
83970 |
accacattgcatactatatcgagacttgggtcagattctgtgaaatttgacgtcattttttcatcctctttagtatggtctttcttcaaaattga |
83876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 138
Target Start/End: Complemental strand, 121642 - 121548
Alignment:
| Q |
44 |
accacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattga |
138 |
Q |
| |
|
||||||||||| ||||| || ||||||||||||||||| ||||||||||| ||||| | ||||| ||||| | ||| |||||||||| |||||| |
|
|
| T |
121642 |
accacattgcatactatatcgagacttgggtcagattctgtgaaatttgacgtcattttttcatcctctttagtatggtctttcttcaaaattga |
121548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 148897 - 148842
Alignment:
| Q |
44 |
accacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcat |
99 |
Q |
| |
|
||||||||||| ||||| || |||||||||||||||| ||||||||||| ||||| |
|
|
| T |
148897 |
accacattgcatactatatcgagacttgggtcagattttgtgaaatttgacgtcat |
148842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 33739 - 33613
Alignment:
| Q |
26 |
tccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctt |
125 |
Q |
| |
|
||||||||||| | || ||||||||||| |||||||| ||||| ||||||||| | ||||||| |||||||| || ||||| ||||||| ||| |||| |
|
|
| T |
33739 |
tccacaggcaaaactgacaccacattgcacactatgtcgagactggggtcagatccaatgaaattcgaagtcatttcttcatcctctttgggatggtctt |
33640 |
T |
|
| Q |
126 |
tcttcagaattgacaatgggggtgaaa |
152 |
Q |
| |
|
|||||| ||||| || || ||||||| |
|
|
| T |
33639 |
tcttcaagattgataagggaggtgaaa |
33613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0362 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0362
Description:
Target: scaffold0362; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 194
Target Start/End: Complemental strand, 14631 - 14463
Alignment:
| Q |
26 |
tccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctt |
125 |
Q |
| |
|
||||||||||| | || || |||||||| | ||| || ||||| |||| |||| | |||||||| |||||||| || ||||| || || | ||||||| |
|
|
| T |
14631 |
tccacaggcaaaactgacacgacattgcatattatatcgagactggggttagatccagtgaaattcgaagtcatttcttcatcctccttaggatgatctc |
14532 |
T |
|
| Q |
126 |
tcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctt |
194 |
Q |
| |
|
|||||| |||||| || || || || |||| || || |||||||| |||||||||||||| ||||||| |
|
|
| T |
14531 |
tcttcaaaattgataagggaggggagattctttccgtggctggttttttaaccatttcgaaaacagctt |
14463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 138
Target Start/End: Original strand, 42285 - 42379
Alignment:
| Q |
44 |
accacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattga |
138 |
Q |
| |
|
||||||||||| ||||| || |||||||| |||||||| |||||||| || ||||| || ||||| || || | ||||| |||||||| |||||| |
|
|
| T |
42285 |
accacattgcacactatatcgagacttggatcagattcagtgaaattcgacgtcatttcttcatcctccttaggatgatttttcttcaaaattga |
42379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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