View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9264A_low_430 (Length: 238)

Name: NF9264A_low_430
Description: NF9264A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9264A_low_430
NF9264A_low_430
[»] scaffold1643 (1 HSPs)
scaffold1643 (9-232)||(325-557)
[»] chr3 (18 HSPs)
chr3 (1-232)||(6942083-6942323)
chr3 (9-230)||(6528661-6528891)
chr3 (9-232)||(7586026-7586258)
chr3 (9-232)||(6841219-6841445)
chr3 (1-232)||(6945415-6945655)
chr3 (9-229)||(6556363-6556592)
chr3 (9-229)||(6523131-6523360)
chr3 (9-145)||(8588078-8588214)
chr3 (9-232)||(6733829-6734061)
chr3 (9-232)||(6781602-6781834)
chr3 (1-129)||(8452782-8452910)
chr3 (9-129)||(8469715-8469835)
chr3 (2-112)||(6481757-6481867)
chr3 (179-232)||(8452969-8453022)
chr3 (171-220)||(6450452-6450501)
chr3 (174-231)||(6730369-6730426)
chr3 (166-231)||(6481629-6481694)
chr3 (161-221)||(6796406-6796466)
[»] scaffold0425 (1 HSPs)
scaffold0425 (9-229)||(9411-9640)
[»] scaffold2053 (1 HSPs)
scaffold2053 (1-129)||(13-141)


Alignment Details
Target: scaffold1643 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: scaffold1643
Description:

Target: scaffold1643; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 9 - 232
Target Start/End: Original strand, 325 - 557
Alignment:
Q  9 aaaggcaaggaggaggagtgccatccttttattgaaaggtaaccaagagaattatagcaacgtagatccaaagagggacattccacaaagccagtaaaat 108  Q
    ||||||||||||||||||||||||||||||||||| ||    | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  325 aaaggcaaggaggaggagtgccatccttttattgatagtctccaaagagaattatagcaatgtagatccaaagagggacattccacaaagccagtaaaat 424  T
Q  109 ccaataccaactcttcaagaaagggaaaattgattaaattttggtg---------cacggtgtactgattatcacaaaggaataaccttttcaggctcgt 199  Q
    |||||  |||||||||||||||||||||||||||||||||||||||         | |||||||||||||||||||||||||||||||||||| ||| ||    
T  425 ccaattgcaactcttcaagaaagggaaaattgattaaattttggtgcggggagaactcggtgtactgattatcacaaaggaataaccttttcaagctggt 524  T
Q  200 cggcaattcatttaccaaaattctatcacatct 232  Q
    || ||||||||||||||||||||||||||||||    
T  525 cgacaattcatttaccaaaattctatcacatct 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 149; Significance: 8e-79; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 6942083 - 6942323
Alignment:
Q  1 gtagtgaaaaaggcaaggaggaggagtgccatccttttattgaaaggtaaccaagagaattatagcaacgtagatccaaagagggacattccacaaagcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   |  ||| |||||||||||||||| ||||||||| |||||||||||||||||    
T  6942083 gtagtgaaaaaggcaaggaggaggagtgccatccttttattgaaagtgtagaaagggaattatagcaacgtaaatccaaagaaggacattccacaaagcc 6942182  T
Q  101 agtaaaatccaataccaactcttcaagaaagggaaaattgattaaattttggtgca---------cggtgtactgattatcacaaaggaataaccttttc 191  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||         ||||||||||||||| |||||||||||| ||||||    
T  6942183 agtaaaatccaacaccaactcttcgagaaagggaaaattgattacattttggtgcaaggagaactcggtgtactgattataacaaaggaataaacttttc 6942282  T
Q  192 aggctcgtcggcaattcatttaccaaaattctatcacatct 232  Q
    | ||| |||||||||||||||||||||||||||||||||||    
T  6942283 aagctggtcggcaattcatttaccaaaattctatcacatct 6942323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 230
Target Start/End: Complemental strand, 6528891 - 6528661
Alignment:
Q  9 aaaggcaaggaggaggagtgccatccttttattgaaaggtaaccaagagaattatagcaacgtagatccaaagagggacattccacaaagccagtaaaat 108  Q
    ||||||||||||||||||||||||||||||||||| ||    | |||||||||||||||||||| ||||||||| ||||||| |||| ||||| |  |||    
T  6528891 aaaggcaaggaggaggagtgccatccttttattgatagtctccaaagagaattatagcaacgtaaatccaaagaaggacatttcacagagccactccaat 6528792  T
Q  109 ccaataccaactcttcaagaaagggaaaattgattaaattttggtgca---------cggtgtactgattatcacaaaggaataaccttttcaggctcgt 199  Q
    ||||  ||||||||||||||||||||||||| |||| |||||| ||||         ||||||||||||||||||||||||||||||||||||  |||||    
T  6528791 ccaaccccaactcttcaagaaagggaaaatttattacattttgctgcatggataactcggtgtactgattatcacaaaggaataaccttttcaaactcgt 6528692  T
Q  200 cggcaattcatttaccaaaattctatcacat 230  Q
    ||| |||||||||||||||||||||||||||    
T  6528691 cggaaattcatttaccaaaattctatcacat 6528661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 232
Target Start/End: Original strand, 7586026 - 7586258
Alignment:
Q  9 aaaggcaaggaggaggagtgccatccttttattgaaaggtaaccaagagaattatagcaacgtagatccaaagagggacattccacaaagccagtaaaat 108  Q
    |||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||| ||||||||||||||| |  ||| ||||  | ||||    
T  7586026 aaaggcaaggaggaggagtgccatccttttattgaaagatcacgaagagaattatagcaacgtaaatccaaagagggacagtttacacagcctctgaaat 7586125  T
Q  109 ccaataccaactcttcaagaaagggaaaattgattaaattttggtgca---------cggtgtactgattatcacaaaggaataaccttttcaggctcgt 199  Q
    | ||   |||| ||||||||||| ||| |||||||| |||||||| ||         |||||||||||||||||||||||||||| |||||||   | ||    
T  7586126 caaacttcaacacttcaagaaagagaatattgattagattttggtccacggagaactcggtgtactgattatcacaaaggaataaacttttcaaatttgt 7586225  T
Q  200 cggcaattcatttaccaaaattctatcacatct 232  Q
    |||||||||||||||||||||||||||||||||    
T  7586226 cggcaattcatttaccaaaattctatcacatct 7586258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 232
Target Start/End: Complemental strand, 6841445 - 6841219
Alignment:
Q  9 aaaggcaaggaggaggagtgccatccttttattgaaaggtaaccaagagaattatagcaacgtagatccaaagagggacattccacaaagccagtaaaat 108  Q
    ||||||||||||||||||  |||||||| |||||||||      ||||||||||||||||| || ||||||||| ||||||| |||| ||||||          
T  6841445 aaaggcaaggaggaggagccccatccttctattgaaagtctttgaagagaattatagcaacttaaatccaaagaaggacatttcacagagccag------ 6841352  T
Q  109 ccaataccaactcttcaagaaagggaaaattgattaaattttggtgcacgg---------tgtactgattatcacaaaggaataaccttttcaggctcgt 199  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||         |||| |||||||||||||||| ||||||||||| ||| ||    
T  6841351 ccaattccaactcttcaagaaagggaaaattgattaaattttggtccacggagaactccgtgtattgattatcacaaaggagtaaccttttcaagctggt 6841252  T
Q  200 cggcaattcatttaccaaaattctatcacatct 232  Q
    |||||||||||||||||||||||||||||||||    
T  6841251 cggcaattcatttaccaaaattctatcacatct 6841219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 6945415 - 6945655
Alignment:
Q  1 gtagtgaaaaaggcaaggaggaggagtgccatccttttattgaaaggtaaccaagagaattatagcaacgtagatccaaagagggacattccacaaagcc 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||     ||||| ||||||||||||||| ||||||||||||||| |  ||| ||||    
T  6945415 gtagtgaaaaaggcaaggaggaggaatgccatccttttattgaaagtctttcaagataattatagcaacgtaaatccaaagagggacagtttacacagcc 6945514  T
Q  101 agtaaaatccaataccaactcttcaagaaagggaaaattgattaaattttggtgca---------cggtgtactgattatcacaaaggaataaccttttc 191  Q
      | ||||||||   ||||| |||||||||| ||| |||||||| |||||||| ||         |||||||||||||||||||||| ||||||||||||    
T  6945515 tctgaaatccaacctcaacttttcaagaaagagaatattgattagattttggtccacggagaactcggtgtactgattatcacaaagtaataaccttttc 6945614  T
Q  192 aggctcgtcggcaattcatttaccaaaattctatcacatct 232  Q
    |   | |||||||||||||||||||||||||||||||||||    
T  6945615 aaatttgtcggcaattcatttaccaaaattctatcacatct 6945655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 229
Target Start/End: Complemental strand, 6556592 - 6556363
Alignment:
Q  9 aaaggcaaggaggaggagtgccatccttttattgaaaggtaaccaagagaattatagcaacgtagatccaaagagggacattccacaaagccagtaaaat 108  Q
    ||||||||||||||||||  ||| |||||||||||||| | || |||| ||||||||||||||| ||||||||| ||||||| |||| ||||| |  |||    
T  6556592 aaaggcaaggaggaggagcaccagccttttattgaaagatcacgaagaaaattatagcaacgtaaatccaaagaaggacatttcacagagccactccaat 6556493  T
Q  109 ccaataccaactcttcaagaaagggaaaattgattaaattttggtgcacg---------gtgtactgattatcacaaaggaataaccttttcaggctcgt 199  Q
     |||  ||||| ||||||||||||||||||||||||||||||||||||||         |||||| ||||    | ||||| |||| |||||||||| ||    
T  6556492 tcaactccaacgcttcaagaaagggaaaattgattaaattttggtgcacggagaactccgtgtaccgatttcgccgaaggagtaactttttcaggctagt 6556393  T
Q  200 cggcaattcatttaccaaaattctatcaca 229  Q
    ||||||||||||||||||||||||||||||    
T  6556392 cggcaattcatttaccaaaattctatcaca 6556363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 229
Target Start/End: Complemental strand, 6523360 - 6523131
Alignment:
Q  9 aaaggcaaggaggaggagtgccatccttttattgaaaggtaaccaagagaattatagcaacgtagatccaaagagggacattccacaaagccagtaaaat 108  Q
    ||||||||||||||||||  ||| |||||||||||||| | || |||| ||||||||||||||| ||||||||||||||| |  ||| ||||  | ||||    
T  6523360 aaaggcaaggaggaggagcaccagccttttattgaaagatcacgaagaaaattatagcaacgtaaatccaaagagggacagtttacacagcctctgaaat 6523261  T
Q  109 ccaataccaactcttcaagaaagggaaaattgattaaattttggtgcacg---------gtgtactgattatcacaaaggaataaccttttcaggctcgt 199  Q
    ||||   ||| |||||||||||||||||||||||||||||||||| ||||         |||| | |||| |  ||||||| |||| |||||||||| ||    
T  6523260 ccaacttcaagtcttcaagaaagggaaaattgattaaattttggtccacggagaactccgtgttccgattttgccaaaggagtaactttttcaggctagt 6523161  T
Q  200 cggcaattcatttaccaaaattctatcaca 229  Q
    ||||||||||||||||||||||||||||||    
T  6523160 cggcaattcatttaccaaaattctatcaca 6523131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 8588078 - 8588214
Alignment:
Q  9 aaaggcaaggaggaggagtgccatccttttattgaaaggtaaccaagagaattatagcaacgtagatccaaagagggacattccacaaagccagtaaaat 108  Q
    |||||||||||| ||||| ||||||||||||||||||| |  |  |||||||||| |||||| ||||||||||||||||| ||||| |||||||||||||    
T  8588078 aaaggcaaggagtaggagcgccatccttttattgaaagtttccggagagaattatggcaacgcagatccaaagagggacactccactaagccagtaaaat 8588177  T
Q  109 ccaataccaactcttcaagaaagggaaaattgattaa 145  Q
    ||||   ||||||||||||||| | ||||||||||||    
T  8588178 ccaaatacaactcttcaagaaatgtaaaattgattaa 8588214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 232
Target Start/End: Original strand, 6733829 - 6734061
Alignment:
Q  9 aaaggcaaggaggaggagtgccatccttttattgaaaggtaaccaagagaattatagcaacgtagatccaaagagggacattccacaaagccagtaaaat 108  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||  | ||||||||| ||||| |  ||||| ||| |  |||    
T  6733829 aaaggcaaggaggaggagtgccatccttttattgaaagatcaccaagagaattataacaacacaaatccaaagaaggacactttacaaaaccactccaat 6733928  T
Q  109 ccaataccaactcttcaagaaagggaaaattgattaaattttggtgca---------cggtgtactgattatcacaaaggaataaccttttcaggctcgt 199  Q
    ||||   |||||| ||||||| || | | |||| ||| ||| | | ||         ||||||||||||| ||| |||||| |||| ||||||  || ||    
T  6733929 ccaaattcaactcgtcaagaatggtatagttgactaagtttggctccacagagaactcggtgtactgattttcagaaaggactaactttttcaaactggt 6734028  T
Q  200 cggcaattcatttaccaaaattctatcacatct 232  Q
     ||||||||||||||||||||||||||||||||    
T  6734029 aggcaattcatttaccaaaattctatcacatct 6734061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 232
Target Start/End: Complemental strand, 6781834 - 6781602
Alignment:
Q  9 aaaggcaaggaggaggagtgccatccttttattgaaaggtaaccaagagaattatagcaacgtagatccaaagagggacattccacaaagccagtaaaat 108  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||  | ||||||||| ||||| |  ||||| ||| |  |||    
T  6781834 aaaggcaaggaggaggagtgccatccttttattgaaagatcaccaagagaattataacaacacaaatccaaagaaggacactttacaaaaccactccaat 6781735  T
Q  109 ccaataccaactcttcaagaaagggaaaattgattaaattttggtgca---------cggtgtactgattatcacaaaggaataaccttttcaggctcgt 199  Q
    ||||   |||||| ||||||| || | | |||| ||| ||| | | ||         ||||||||||||| ||| |||||| |||| ||||||  || ||    
T  6781734 ccaaattcaactcgtcaagaatggtatagttgactaagtttggctccacagagaactcggtgtactgattttcagaaaggactaactttttcaaactggt 6781635  T
Q  200 cggcaattcatttaccaaaattctatcacatct 232  Q
     ||||||||||||||||||||||||||||||||    
T  6781634 aggcaattcatttaccaaaattctatcacatct 6781602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 8452782 - 8452910
Alignment:
Q  1 gtagtgaaaaaggcaaggaggaggagtgccatccttttattgaaaggtaaccaagagaattatagcaacgtagatccaaagagggacattccacaaagcc 100  Q
    |||||||||||| |||||||||||||  ||||| | |||||||||| | ||||||||||||||||||||  | |||||||| ||||||||  | | ||||    
T  8452782 gtagtgaaaaagacaaggaggaggagcaccatcttgttattgaaagttcaccaagagaattatagcaacacaaatccaaagtgggacattttaaagagcc 8452881  T
Q  101 agtaaaatccaataccaactcttcaagaa 129  Q
    | | ||||||||  ||||| |||||||||    
T  8452882 attcaaatccaactccaacacttcaagaa 8452910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 129
Target Start/End: Original strand, 8469715 - 8469835
Alignment:
Q  9 aaaggcaaggaggaggagtgccatccttttattgaaaggtaaccaagagaattatagcaacgtagatccaaagagggacattccacaaagccagtaaaat 108  Q
    ||||||||||||||||||||||||||| |||||||||| | || ||||||| ||||||| || | |||||||||| ||||||  ||| ||||  ||||||    
T  8469715 aaaggcaaggaggaggagtgccatcctgttattgaaagatcacgaagagaactatagcatcgcaaatccaaagagagacattttacagagcctataaaat 8469814  T
Q  109 ccaataccaactcttcaagaa 129  Q
    | ||   ||||||||||||||    
T  8469815 caaacttcaactcttcaagaa 8469835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 6481867 - 6481757
Alignment:
Q  2 tagtgaaaaaggcaaggaggaggagtgccatccttttattgaaaggtaaccaagagaattatagcaacgtagatccaaagagggacattccacaaagcca 101  Q
    ||||||||| | ||||||||||||| |||| ||| ||||||||||   || |||||||||||| ||||| | ||||||||||||||| || |||||||||    
T  6481867 tagtgaaaaggacaaggaggaggagcgccaccctattattgaaagcgtacgaagagaattataacaacgcaaatccaaagagggacactcaacaaagcca 6481768  T
Q  102 gtaaaatccaa 112  Q
     | ||||||||    
T  6481767 ctcaaatccaa 6481757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 8452969 - 8453022
Alignment:
Q  179 gaataaccttttcaggctcgtcggcaattcatttaccaaaattctatcacatct 232  Q
    ||||||| |||||| ||| |||||||||||||||||||||||||||||||||||    
T  8452969 gaataactttttcaagctggtcggcaattcatttaccaaaattctatcacatct 8453022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 6450501 - 6450452
Alignment:
Q  171 tcacaaaggaataaccttttcaggctcgtcggcaattcatttaccaaaat 220  Q
    |||||||||| |||| |||||| ||| |||||||||||||||||||||||    
T  6450501 tcacaaaggactaactttttcaagctagtcggcaattcatttaccaaaat 6450452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 6730426 - 6730369
Alignment:
Q  174 caaaggaataaccttttcaggctcgtcggcaattcatttaccaaaattctatcacatc 231  Q
    ||||||| |||| |||||| ||| ||||||||||||||||||||||| || |||||||    
T  6730426 caaaggactaactttttcaagctagtcggcaattcatttaccaaaatgctttcacatc 6730369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 6481694 - 6481629
Alignment:
Q  166 gattatcacaaaggaataaccttttcaggctcgtcggcaattcatttaccaaaattctatcacatc 231  Q
    |||| |||||||||| |||| |||||| ||| ||||||||||| |||| |||||| || |||||||    
T  6481694 gattttcacaaaggactaactttttcaagctggtcggcaattcctttatcaaaatgctgtcacatc 6481629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 6796466 - 6796406
Alignment:
Q  161 gtactgattatcacaaaggaataaccttttcaggctcgtcggcaattcatttaccaaaatt 221  Q
    ||||||||| | ||||||||  ||| |||||| ||| || |||||||||||||||||||||    
T  6796466 gtactgatttttacaaaggacaaactttttcaagcttgttggcaattcatttaccaaaatt 6796406  T

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Target: scaffold0425 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 9 - 229
Target Start/End: Complemental strand, 9640 - 9411
Alignment:
Q  9 aaaggcaaggaggaggagtgccatccttttattgaaaggtaaccaagagaattatagcaacgtagatccaaagagggacattccacaaagccagtaaaat 108  Q
    ||||||||||||||||| |||||||||| |||||| ||    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9640 aaaggcaaggaggaggaatgccatccttgtattgatagtctccaaagagaattatagcaacgtagatccaaagagggacattccacaaagccagtaaaat 9541  T
Q  109 ccaataccaactcttcaagaaagggaaaattgattaaattttggtgca---------cggtgtactgattatcacaaaggaataaccttttcaggctcgt 199  Q
    |||||  ||||  |||||||||||||||||||||||||||||||| ||         | |||||| |||| |  ||||||| ||| ||||||| ||| ||    
T  9540 ccaattgcaacgattcaagaaagggaaaattgattaaattttggtccacagagaactcagtgtaccgattttgccaaaggagtaaacttttcaagctggt 9441  T
Q  200 cggcaattcatttaccaaaattctatcaca 229  Q
    ||||||||||||||||||||||||||||||    
T  9440 cggcaattcatttaccaaaattctatcaca 9411  T

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Target: scaffold2053 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold2053
Description:

Target: scaffold2053; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 141 - 13
Alignment:
Q  1 gtagtgaaaaaggcaaggaggaggagtgccatccttttattgaaaggtaaccaagagaattatagcaacgtagatccaaagagggacattccacaaagcc 100  Q
    |||||||||||||||| ||||| |||||||||||||||||||| ||    | |||||||||||||||||||| ||||||||||||||| |  ||| ||||    
T  141 gtagtgaaaaaggcaacgaggatgagtgccatccttttattgatagtctccaaagagaattatagcaacgtaaatccaaagagggacagtttacacagcc 42  T
Q  101 agtaaaatccaataccaactcttcaagaa 129  Q
      | ||||||||   ||||||||||||||    
T  41 tctgaaatccaacttcaactcttcaagaa 13  T

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