View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9264A_low_526 (Length: 229)
Name: NF9264A_low_526
Description: NF9264A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9264A_low_526 |
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Alignment Details
Target: chr1 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 11 - 224
Target Start/End: Original strand, 24417146 - 24417362
Alignment:
| Q |
11 |
aatatatatcgtctggaagagttgcacaatttactttcagttacacaatgacgaacaaaaccaattaagaactccattaagaggttcagaaggaagatga |
110 |
Q |
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| T |
24417146 |
aatatatatcgtgtggaagagttgcacaatttactttcagttacacaatgacaaacaaaaccaattaagaactccattaagaggttcagaaggaagatga |
24417245 |
T |
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| Q |
111 |
tgaagacactgttttgactgtcataccattcactaagaatattatgatttttacaatatcaaaggccttgaagcaactaccaaagctt---aagacctag |
207 |
Q |
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| T |
24417246 |
tgaagacactgttttgactgtcataccattcactaagaatattatgatttttacaatatcaaaggccttgaagcaactaccaaagcttaagaagacctag |
24417345 |
T |
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| Q |
208 |
aacagaaccacatacgt |
224 |
Q |
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|||||||| |||||||| |
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| T |
24417346 |
aacagaacaacatacgt |
24417362 |
T |
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