View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9264A_low_545 (Length: 226)
Name: NF9264A_low_545
Description: NF9264A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9264A_low_545 |
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Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 5750180 - 5750390
Alignment:
| Q |
1 |
ggtggactcaattaatatataccatactaccatttgcacatgcatatacacacaacacctaaaattgaagaataaagtatttaacatagctaaccaaaac |
100 |
Q |
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| T |
5750180 |
ggtggactcaattaatatataccatactaccatttgcacatgcatatacacacaacacctaaaattgaagaataaagtatttaacatagctaaccaaaac |
5750279 |
T |
|
| Q |
101 |
aaacgaagataataaaaccaagattattacatgagtaaattaaccaagaggtcacaaaaatcaactaatttgaacttgaagactctaaattaaattggtc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
5750280 |
aaacgaagataataaaaccaagattattacatgagtaaattaaccaagaggtcacaaaaatcaactaatttgaacttgaagactctaaattaaatttgtc |
5750379 |
T |
|
| Q |
201 |
aattaacgtag |
211 |
Q |
| |
|
||||||||||| |
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| T |
5750380 |
aattaacgtag |
5750390 |
T |
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