View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9264_high_30 (Length: 428)
Name: NF9264_high_30
Description: NF9264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9264_high_30 |
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Alignment Details
Target: chr8 (Bit Score: 223; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 165 - 411
Target Start/End: Complemental strand, 9638536 - 9638285
Alignment:
| Q |
165 |
tccagtagaatgaactaaactcgttcatacaatatgatgaatcaat----aaatcatggctaagagagaggtccatatttaatggagattatataaactt |
260 |
Q |
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| T |
9638536 |
tccagtagaatgaactaaactcgctcatacaatatgatgaatcaatgtttaaatcatggctaagagagaggtccatatttaatggagattatataaactt |
9638437 |
T |
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| Q |
261 |
acgtgaaaattgttcaacactcaactaaacacgttctaagttccaccagatatttggatacgctttgtttcgccgcc-acagtgtgcttatgaggtattt |
359 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
9638436 |
acgtgaaaattgttcaacactcaactaaacacgttctaagttccaccagatatttggatacgctttgtttcgccgccaacagtgtgcttatgaggtattt |
9638337 |
T |
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| Q |
360 |
ttaaacatagcaattatagataaacaataattatgttcacaagtgttatcac |
411 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9638336 |
ttaaacatagcaattatagataaacaataattatgttcacaagtgttatcac |
9638285 |
T |
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