View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9264_high_34 (Length: 377)
Name: NF9264_high_34
Description: NF9264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9264_high_34 |
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Alignment Details
Target: chr1 (Bit Score: 320; Significance: 1e-180; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 3 - 359
Target Start/End: Original strand, 9884064 - 9884415
Alignment:
| Q |
3 |
tttcggcctattttaacttttgaagacaaattatggttggctcatacttgtatgacaatgaaagagctactataaaggatgattaaggtttacacttaga |
102 |
Q |
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| T |
9884064 |
tttcggcctattttaacttt-gaagacaaattatggttggctcatacttgtatgacaatgaaagagctactataaaggatgattaaggtttacacttaga |
9884162 |
T |
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| Q |
103 |
tgatgttgtaaatcaatcatgttgttctcacgtactggcactaatctcagatttgtattttgtaatatcctctttgttgagagttataatcttaggaaat |
202 |
Q |
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| T |
9884163 |
tgatgttgtaaatcaatcatgttgttctcacgtacaggcactaatcccagatttgtattttgtaatatcctctttgttgagagttataatcttaggaaat |
9884262 |
T |
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| Q |
203 |
aacattataccacgaggtggtaacatgtacataaagtaacatagatgatgttgtaaatcaatcaagttgttctcatgcatatgcattgatctaagatttg |
302 |
Q |
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| T |
9884263 |
aacattataccacgaggtggtaac----acataaagtaacatagatgatgttgtaaatcaatcaagttgttctcatgcatatgcattgatctaagatttg |
9884358 |
T |
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| Q |
303 |
tgcatgcatatacaaactcaaagtgttgtaattggctcactagtgtaaacacccttt |
359 |
Q |
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| T |
9884359 |
tgcatacatatacaaactcaaagtgttgtaattggctcactagtgtaaacacccttt |
9884415 |
T |
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