View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9264_low_134 (Length: 263)
Name: NF9264_low_134
Description: NF9264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9264_low_134 |
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Alignment Details
Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 7 - 253
Target Start/End: Complemental strand, 41178798 - 41178552
Alignment:
| Q |
7 |
aatcaattttgacccctccagaagtgaaaccaaacattaagcatagtgattctgattaaataaaattaacgtttggcaatccaattcttgcattataatt |
106 |
Q |
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| T |
41178798 |
aatcaattttgacccctccagaggtgaaaccaaacattaagcatagtgattctgattaaataaaattaacgtttggcaatccaattcttgcattataatt |
41178699 |
T |
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| Q |
107 |
tgtagttattttgtaagttttgatgctcctgcgtttgactgcgtctgtttatgtttagagagggggtgatgtaagtaatttactctttaggttgtttcat |
206 |
Q |
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| T |
41178698 |
tgtagttattttgtaagttttgatgctcctgcgtttgattgcgtctgtttatgtttagagagggggtgatgtaagtaatttactctttaggttgtttcat |
41178599 |
T |
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| Q |
207 |
tgttttttacatttgttttggtgaatcatgagaactattagtctgtg |
253 |
Q |
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| T |
41178598 |
tgttttttacatttgttttggtgaatcatgagaactattagtctgtg |
41178552 |
T |
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