View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9264_low_161 (Length: 213)
Name: NF9264_low_161
Description: NF9264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9264_low_161 |
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Alignment Details
Target: chr6 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 35045335 - 35045134
Alignment:
| Q |
1 |
ttcatgctattgttcctaatgaaaataccttgctaattaactcaaaatttggttgagacataatttaaacctaattaaatannnnnnnn-gaaagataaa |
99 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
35045335 |
ttcatgctattgttcctaatgaaaataccttgctaattaactcaaaatttggttgagacataatttaaacctaattaaatatatttttttgaaagataaa |
35045236 |
T |
|
| Q |
100 |
cctaattacatattatttaacttagagatcaaactgatactttccgaacaatagccttaattaaaatgcattaaccatttatgtctagacctttgttagc |
199 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35045235 |
cctaattacatattatttaacttagagatcaaactaatactttccaaacaatagccttaattaaaatgcattaaccatttatgtctagacctttgttagc |
35045136 |
T |
|
| Q |
200 |
tc |
201 |
Q |
| |
|
|| |
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|
| T |
35045135 |
tc |
35045134 |
T |
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