View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9264_low_67 (Length: 410)
Name: NF9264_low_67
Description: NF9264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9264_low_67 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 379; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 16 - 410
Target Start/End: Original strand, 32029656 - 32030050
Alignment:
| Q |
16 |
agaggaagagcttcaagaacttcaaggttagtcatgcaatgtttgtgatacaaaaccatgttttaaaatattaattatgcaataaaaatttgttctttgg |
115 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |
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| T |
32029656 |
agaggaagagctccaagaacttcaaggttagtcatgcaatgtttgtgatacaaaaccatgttttaaaatattgattatgcaataaaaatttgtgctttgg |
32029755 |
T |
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| Q |
116 |
agtaatttgatatgtttcaccacaccttgaactttgaatgaactgaattgagtaggtactcaacttctgaacacaacactgtctgtgaaagaatatgtga |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32029756 |
agtaatttgatatgtttcaccacaccttgaactttgaatgaactgaattgagtaggtactcaacttctgaacacaacactgtctgtgaaagaatatgtga |
32029855 |
T |
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| Q |
216 |
agaatgaatgtctgaaactggaaaaagaaatcattctccctaataagaagctttttccttctcctgtgacgctggatgacttcttctgggcatttggaat |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32029856 |
agaatgaatgtctgaaactggaaaaagaaatcattctccctaataagaagctttttccttctcctgtgacgctggatgacttcttctgggcatttggaat |
32029955 |
T |
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| Q |
316 |
tctcagatcaagggcattttctcgccttcgcaatgaaaatctagttgtgattccactggcagacttggtaagaaccttttcatttctctgcttct |
410 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
32029956 |
tctcagatcaagggcattttctcgccttcgcaatgaaaatctagttgtgattccactggcagacttggtaagaaccttttcatttctcttcttct |
32030050 |
T |
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