View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9264_low_96 (Length: 342)
Name: NF9264_low_96
Description: NF9264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9264_low_96 |
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Alignment Details
Target: chr1 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 7 - 325
Target Start/End: Original strand, 52808022 - 52808340
Alignment:
| Q |
7 |
ttggtgttagagcataagacaaacaaatacttgcatgattggtttatggatgaaacctggcaattatggtattttgctgtggtgcgaattggtaattaat |
106 |
Q |
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| T |
52808022 |
ttggtgttagagcataagacaaacaaatacttgcatgattggtctatggatgaaacctggcaattatggtattttgttgtggtgcgaattggtaattaat |
52808121 |
T |
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| Q |
107 |
caccttattaactatgtttggctgtactaataaacaactctatcggttagttaagaaactaaactaccagttacaaacaaagtttaagttacagcctatg |
206 |
Q |
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| T |
52808122 |
caccttattaactatgtttggctgtactaataaacaactctatcggttagttaagaaactaaactaccagttacaaacaaagtttaagttacagcctatg |
52808221 |
T |
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| Q |
207 |
ggacaaatctgaaattggttgaacttaatttagaaaaactaaatctatttagctcagaatcttgttttccaagttgtgattatgtagtgtcattttattg |
306 |
Q |
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| T |
52808222 |
ggacaaatctgaaattggttgaacttaatttagaaaaactaaatctatttagctcagaatcttgttttccaagttgtgattatgtagtgtcattttattg |
52808321 |
T |
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| Q |
307 |
tcttgacatttgttctcct |
325 |
Q |
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| T |
52808322 |
tcttgacatttgttctcct |
52808340 |
T |
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