View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9265_low_29 (Length: 411)
Name: NF9265_low_29
Description: NF9265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9265_low_29 |
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Alignment Details
Target: chr5 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 125 - 406
Target Start/End: Original strand, 27344012 - 27344292
Alignment:
| Q |
125 |
aatatggaatgattcctttaaaataagcttaagctatgctatgcttgatttgaactagagccaagacatttgaatttagtggtttctagttgttatgttt |
224 |
Q |
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| T |
27344012 |
aatatggaatgattcctttaaaataagcttaagctatgttatgcttgatttgaaatagagccaagacatttgaatt-agtggtttctagttgttatgttt |
27344110 |
T |
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| Q |
225 |
tcattcaaagaatgggaaattgtgaataaaatcagtataagggtgctttgcttcaagcattattgtgatccatgattgggaataaatccaatataatgtg |
324 |
Q |
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| T |
27344111 |
tcattcaaagaatgggaaattgtgaataaaatcagtataagggtgctttgcttcaagcattattgtgatccatgattaggaataaatccaatataatgtg |
27344210 |
T |
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| Q |
325 |
aagaaatagtattttcactttataaaagtaactgcagaaattttgcttgcatttgcagactacttctgatttgttatcttct |
406 |
Q |
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|||||| |||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
27344211 |
aagaaagagtaatttcgctttataaaagtaactgcagaaattttgcttgcacttgcagactacttctgatttgttatcttct |
27344292 |
T |
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