View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9265_low_43 (Length: 266)
Name: NF9265_low_43
Description: NF9265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9265_low_43 |
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Alignment Details
Target: chr5 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 5 - 248
Target Start/End: Complemental strand, 6684281 - 6684038
Alignment:
| Q |
5 |
taaattaattgctcgaattgaggtgtttcttcaacaaactttctcacttcacgatctctaatattaatcgtgaaactattcaaattgttcattattttac |
104 |
Q |
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| T |
6684281 |
taaattaattgctcgaattgaggtgtttcttcaacaaactttctcgcttcacgatctctaatattaatcgtgaaactattcaaattgttcattattttac |
6684182 |
T |
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| Q |
105 |
caagtttggtttgaactcctttagctaagaccatattttttcccaatcatgatattgaaggatgggaccttttctcgaaaaaccttgtatcttggacata |
204 |
Q |
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| T |
6684181 |
caagtttggtttgaactcctttagctaagaccatattttttcccaatcatgatattgaaggatgggaccttttctcgaaaaaccttgtatcttggacata |
6684082 |
T |
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| Q |
205 |
taggcattcttttggatcttgtaccttatagtaatagtacactt |
248 |
Q |
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| T |
6684081 |
taggcattcttttggatcttgtaccttatagtaatagtacactt |
6684038 |
T |
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