View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9266_low_46 (Length: 321)
Name: NF9266_low_46
Description: NF9266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9266_low_46 |
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Alignment Details
Target: chr1 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 17 - 311
Target Start/End: Original strand, 36414551 - 36414845
Alignment:
| Q |
17 |
aaatctttccttgttcctccaaacttaacccgaattctctcggatccagctgatacaggttcagaatttcttctcttttcggtcaaatgaactggtcgaa |
116 |
Q |
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| T |
36414551 |
aaatctttccttgttcctccaaacttaacccgaattctctcggatccagctgatacaggttcagaatttcttctcttttcggtcaaatgaaccggtcgaa |
36414650 |
T |
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| Q |
117 |
ttctacaaaacactctaatgctccctgaacatcataataaaattattcaaccctttaatcaaaataacataacagaattttaatccatacatcaacatat |
216 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36414651 |
ttctacaaaacactctaatgctccctgaacatcaaaataaaattattcaaccctttaatcaaaataacataacagaattttaatccatacatcaacatat |
36414750 |
T |
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| Q |
217 |
aatagaatccccaatcaacactacaagaaccaccttttatatccaatatcttactcagtgcttctctcctcttttcatccacttttctctgcttc |
311 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36414751 |
aatagaatccccaatcaacactacaagaactaccttttatatccaatatcttactcagtgcttctctcctcttttcatccacttttctctgcttc |
36414845 |
T |
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