View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9266_low_61 (Length: 262)
Name: NF9266_low_61
Description: NF9266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9266_low_61 |
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Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 52353398 - 52353162
Alignment:
| Q |
4 |
gctatggaccagatgttagtacctggtcctagcccagtgtatgtaaagtatatttagagcaaggagacaaggttgttagttaataaatataggttgagct |
103 |
Q |
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| T |
52353398 |
gctatggactagatgttagtccctggtcctagcccagtgtatgtaaagtatatttagagcaaggagacaaggttgttagttaataaatataggttgagct |
52353299 |
T |
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| Q |
104 |
gttatgataggggg-catgcaattggtgtgtcagttaggctgggatctttcccccaggccgtggagaaaataaataaatcatttatagtattttaggtgc |
202 |
Q |
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| T |
52353298 |
gttatgataggggggcatgcaattggtgtgtcagttaggctgggatctttcccccaggccgtggagaaaatacataaatcatgtatagtattttaggtgc |
52353199 |
T |
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| Q |
203 |
ttagtgttgtaacaaacttggacttgactgcaaaatg |
239 |
Q |
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| T |
52353198 |
ttagtgttgtaacaaacttggacttgactgcaaaatg |
52353162 |
T |
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