View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9267_low_37 (Length: 267)

Name: NF9267_low_37
Description: NF9267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9267_low_37
NF9267_low_37
[»] chr4 (49 HSPs)
chr4 (1-252)||(35161059-35161310)
chr4 (1-97)||(23292926-23293022)
chr4 (1-97)||(35157925-35158021)
chr4 (1-97)||(8423658-8423754)
chr4 (1-97)||(28964188-28964284)
chr4 (1-77)||(49431049-49431125)
chr4 (4-77)||(21945529-21945602)
chr4 (1-97)||(12895214-12895310)
chr4 (13-97)||(34306744-34306828)
chr4 (1-54)||(54580006-54580059)
chr4 (5-96)||(3947702-3947798)
chr4 (1-93)||(12797282-12797374)
chr4 (1-97)||(715545-715643)
chr4 (1-97)||(752871-752969)
chr4 (1-97)||(36635347-36635449)
chr4 (5-99)||(16073421-16073515)
chr4 (1-67)||(29205467-29205533)
chr4 (38-96)||(30982808-30982866)
chr4 (4-97)||(2361915-2362008)
chr4 (9-74)||(38846975-38847040)
chr4 (1-77)||(40179596-40179672)
chr4 (1-73)||(4157459-4157531)
chr4 (1-97)||(42640552-42640643)
chr4 (1-60)||(4157172-4157231)
chr4 (1-75)||(8402705-8402778)
chr4 (37-99)||(19482738-19482800)
chr4 (1-74)||(9996863-9996936)
chr4 (38-99)||(22234817-22234878)
chr4 (1-77)||(40481659-40481740)
chr4 (3-95)||(482185-482272)
chr4 (34-78)||(5654522-5654566)
chr4 (37-97)||(29205527-29205587)
chr4 (26-97)||(5414101-5414172)
chr4 (42-93)||(20743210-20743261)
chr4 (34-93)||(27706110-27706169)
chr4 (43-94)||(28084589-28084640)
chr4 (50-97)||(37203324-37203371)
chr4 (34-100)||(53381527-53381594)
chr4 (39-101)||(3064864-3064926)
chr4 (1-47)||(10499260-10499306)
chr4 (35-97)||(11650678-11650740)
chr4 (48-98)||(30094083-30094133)
chr4 (26-92)||(30838269-30838335)
chr4 (2-31)||(14126117-14126146)
chr4 (34-95)||(19312402-19312463)
chr4 (38-99)||(24613628-24613689)
chr4 (37-97)||(903992-904052)
chr4 (48-100)||(18513172-18513224)
chr4 (1-77)||(36509052-36509128)
[»] chr5 (41 HSPs)
chr5 (1-99)||(43564904-43565002)
chr5 (1-95)||(21190998-21191092)
chr5 (1-97)||(21576685-21576781)
chr5 (1-100)||(28588611-28588710)
chr5 (1-75)||(30502350-30502424)
chr5 (1-75)||(30542693-30542767)
chr5 (1-97)||(16304366-16304460)
chr5 (28-97)||(30098387-30098456)
chr5 (1-100)||(6770566-6770658)
chr5 (1-73)||(42893383-42893455)
chr5 (34-97)||(21522817-21522880)
chr5 (34-97)||(21533383-21533446)
chr5 (34-96)||(21542097-21542159)
chr5 (1-97)||(31084346-31084447)
chr5 (45-97)||(5182673-5182725)
chr5 (34-98)||(14873578-14873642)
chr5 (1-61)||(18421817-18421877)
chr5 (1-97)||(21194063-21194159)
chr5 (6-57)||(32630715-32630766)
chr5 (34-97)||(39698608-39698671)
chr5 (1-47)||(15884011-15884057)
chr5 (7-77)||(26312798-26312868)
chr5 (4-98)||(27932261-27932355)
chr5 (5-75)||(30099000-30099070)
chr5 (37-94)||(39268541-39268598)
chr5 (34-95)||(43001861-43001922)
chr5 (54-98)||(6326252-6326296)
chr5 (37-77)||(15382544-15382584)
chr5 (1-48)||(6247645-6247692)
chr5 (48-95)||(21351852-21351899)
chr5 (1-95)||(23015926-23016025)
chr5 (38-93)||(30183620-30183675)
chr5 (4-42)||(6326292-6326330)
chr5 (26-96)||(6401557-6401627)
chr5 (34-97)||(19820328-19820388)
chr5 (1-93)||(4105282-4105374)
chr5 (45-77)||(17088358-17088390)
chr5 (37-97)||(17123107-17123166)
chr5 (46-98)||(23289997-23290049)
chr5 (45-97)||(35017110-35017162)
chr5 (1-97)||(42029775-42029871)
[»] chr3 (44 HSPs)
chr3 (1-99)||(40993273-40993371)
chr3 (1-97)||(55401098-55401194)
chr3 (4-97)||(20503491-20503584)
chr3 (1-77)||(10954975-10955051)
chr3 (2-90)||(3631708-3631796)
chr3 (35-99)||(41961577-41961641)
chr3 (1-97)||(11252001-11252095)
chr3 (1-97)||(27505269-27505370)
chr3 (1-75)||(28918024-28918100)
chr3 (1-97)||(23657762-23657858)
chr3 (1-97)||(35222961-35223057)
chr3 (1-95)||(25775532-25775624)
chr3 (1-75)||(7171524-7171598)
chr3 (1-96)||(8789489-8789586)
chr3 (1-97)||(18426972-18427068)
chr3 (4-95)||(24204983-24205074)
chr3 (8-100)||(26492142-26492234)
chr3 (34-97)||(15796223-15796286)
chr3 (34-97)||(34185052-34185115)
chr3 (36-99)||(49651714-49651777)
chr3 (37-95)||(4987222-4987280)
chr3 (34-96)||(14216959-14217021)
chr3 (34-96)||(14223088-14223150)
chr3 (1-97)||(13845465-13845561)
chr3 (4-96)||(15999951-16000049)
chr3 (34-100)||(14209180-14209246)
chr3 (35-73)||(14832167-14832205)
chr3 (1-96)||(32804485-32804576)
chr3 (46-100)||(40052380-40052434)
chr3 (1-58)||(25093525-25093582)
chr3 (34-95)||(29508506-29508567)
chr3 (1-57)||(2941581-2941637)
chr3 (1-73)||(24633365-24633437)
chr3 (2-53)||(3865698-3865749)
chr3 (6-96)||(15864861-15864950)
chr3 (1-60)||(45451576-45451635)
chr3 (1-43)||(7928473-7928515)
chr3 (1-43)||(8383280-8383322)
chr3 (43-97)||(17276792-17276846)
chr3 (1-43)||(49505148-49505190)
chr3 (43-100)||(5407196-5407253)
chr3 (1-29)||(25948895-25948923)
chr3 (42-98)||(27903702-27903758)
chr3 (1-97)||(51206293-51206389)
[»] chr2 (39 HSPs)
chr2 (1-95)||(2438661-2438755)
chr2 (8-98)||(15972903-15972993)
chr2 (1-96)||(28596492-28596587)
chr2 (1-97)||(37559000-37559096)
chr2 (4-97)||(18840953-18841046)
chr2 (1-98)||(20242666-20242763)
chr2 (1-97)||(38117099-38117195)
chr2 (1-75)||(5367215-5367289)
chr2 (1-74)||(30404813-30404886)
chr2 (1-71)||(5040757-5040827)
chr2 (35-97)||(26769579-26769641)
chr2 (4-98)||(34993921-34994015)
chr2 (34-100)||(37419810-37419876)
chr2 (1-80)||(31808100-31808179)
chr2 (34-97)||(35056935-35056998)
chr2 (5-75)||(12224250-12224320)
chr2 (4-94)||(21091749-21091839)
chr2 (1-77)||(37411204-37411280)
chr2 (29-97)||(42511322-42511390)
chr2 (2-75)||(29176455-29176528)
chr2 (1-97)||(24009319-24009414)
chr2 (41-97)||(31456560-31456616)
chr2 (34-101)||(4207923-4207990)
chr2 (34-97)||(11223793-11223855)
chr2 (34-77)||(14996179-14996221)
chr2 (49-92)||(23058389-23058432)
chr2 (34-97)||(30717459-30717522)
chr2 (34-97)||(36096304-36096367)
chr2 (4-74)||(18570998-18571068)
chr2 (1-43)||(19536391-19536433)
chr2 (19-97)||(19580225-19580303)
chr2 (51-101)||(29176364-29176414)
chr2 (34-95)||(15657931-15657992)
chr2 (34-95)||(19942321-19942382)
chr2 (4-100)||(34006927-34007024)
chr2 (41-97)||(18054716-18054772)
chr2 (26-97)||(22084756-22084830)
chr2 (34-74)||(27084325-27084365)
chr2 (1-37)||(32749825-32749861)
[»] chr7 (42 HSPs)
chr7 (4-97)||(21880178-21880271)
chr7 (1-98)||(15680832-15680929)
chr7 (1-97)||(598231-598327)
chr7 (1-100)||(5409768-5409872)
chr7 (4-92)||(13770717-13770810)
chr7 (1-96)||(32287404-32287499)
chr7 (1-97)||(43027404-43027505)
chr7 (1-100)||(9778523-9778627)
chr7 (1-97)||(21864831-21864927)
chr7 (7-96)||(7197238-7197327)
chr7 (9-97)||(24105709-24105797)
chr7 (1-77)||(26733327-26733403)
chr7 (4-75)||(8234172-8234243)
chr7 (1-96)||(20549814-20549909)
chr7 (34-97)||(24339709-24339772)
chr7 (1-97)||(32093954-32094056)
chr7 (2-98)||(1401049-1401143)
chr7 (2-75)||(33994236-33994309)
chr7 (12-96)||(10359633-10359717)
chr7 (1-97)||(18212973-18213069)
chr7 (1-97)||(25481925-25482021)
chr7 (1-97)||(42720830-42720926)
chr7 (34-96)||(11665370-11665432)
chr7 (39-97)||(29763129-29763187)
chr7 (4-77)||(5835273-5835346)
chr7 (51-95)||(9408265-9408309)
chr7 (34-97)||(1433515-1433578)
chr7 (34-97)||(2334316-2334379)
chr7 (34-97)||(17852056-17852119)
chr7 (1-96)||(18035806-18035900)
chr7 (26-97)||(21930687-21930758)
chr7 (5-96)||(22484052-22484143)
chr7 (47-97)||(30813866-30813916)
chr7 (1-75)||(39138467-39138541)
chr7 (41-78)||(3294263-3294300)
chr7 (48-97)||(6490786-6490835)
chr7 (4-75)||(12278861-12278932)
chr7 (45-97)||(14729770-14729822)
chr7 (6-97)||(23751928-23752018)
chr7 (1-77)||(27093373-27093449)
chr7 (1-77)||(27184852-27184928)
chr7 (1-89)||(41020519-41020607)
[»] chr6 (48 HSPs)
chr6 (1-97)||(28152121-28152217)
chr6 (1-97)||(34595157-34595253)
chr6 (4-99)||(28715321-28715416)
chr6 (34-97)||(16766764-16766827)
chr6 (2-99)||(4877967-4878063)
chr6 (1-97)||(7378002-7378098)
chr6 (1-96)||(17841530-17841625)
chr6 (3-94)||(32978842-32978933)
chr6 (4-98)||(6898220-6898314)
chr6 (1-95)||(7265535-7265629)
chr6 (1-99)||(33001227-33001325)
chr6 (5-101)||(29020939-29021036)
chr6 (1-73)||(9658902-9658974)
chr6 (1-97)||(24645504-24645600)
chr6 (1-97)||(32511606-32511702)
chr6 (1-99)||(17327588-17327691)
chr6 (35-100)||(8365445-8365510)
chr6 (1-100)||(8776905-8777009)
chr6 (1-97)||(13360313-13360408)
chr6 (1-92)||(12627522-12627613)
chr6 (4-74)||(7977793-7977863)
chr6 (1-96)||(31384943-31385048)
chr6 (34-99)||(10339052-10339117)
chr6 (47-94)||(9025448-9025495)
chr6 (49-100)||(12868613-12868664)
chr6 (38-97)||(17302628-17302687)
chr6 (34-97)||(17435266-17435329)
chr6 (1-74)||(3398641-3398719)
chr6 (1-99)||(7740664-7740762)
chr6 (1-47)||(19040375-19040421)
chr6 (1-98)||(16833331-16833428)
chr6 (4-75)||(12696350-12696426)
chr6 (1-33)||(17341668-17341700)
chr6 (26-97)||(3209447-3209518)
chr6 (4-94)||(12235462-12235552)
chr6 (1-75)||(853821-853895)
chr6 (2-98)||(1191642-1191735)
chr6 (15-77)||(1315969-1316031)
chr6 (1-99)||(13364643-13364741)
chr6 (42-96)||(31959214-31959268)
chr6 (1-42)||(1700375-1700416)
chr6 (1-53)||(31579211-31579261)
chr6 (37-97)||(7248428-7248488)
chr6 (34-74)||(10827507-10827547)
chr6 (4-96)||(12690442-12690534)
chr6 (10-58)||(23771610-23771658)
chr6 (8-52)||(30851630-30851674)
chr6 (1-73)||(32298571-32298643)
[»] chr1 (53 HSPs)
chr1 (8-98)||(37598861-37598951)
chr1 (1-97)||(18337352-18337448)
chr1 (1-97)||(22515827-22515923)
chr1 (1-95)||(1486646-1486745)
chr1 (1-96)||(40258874-40258969)
chr1 (1-100)||(51410048-51410147)
chr1 (1-99)||(5898204-5898302)
chr1 (1-95)||(42359391-42359485)
chr1 (1-74)||(1815280-1815353)
chr1 (1-77)||(40181894-40181970)
chr1 (1-97)||(46348323-46348419)
chr1 (37-99)||(40917819-40917881)
chr1 (34-98)||(6427531-6427595)
chr1 (1-101)||(29163317-29163417)
chr1 (48-99)||(29144318-29144369)
chr1 (38-99)||(9828115-9828176)
chr1 (4-77)||(18190068-18190141)
chr1 (8-99)||(9690211-9690303)
chr1 (1-77)||(38078621-38078697)
chr1 (34-97)||(32461393-32461456)
chr1 (1-97)||(52903272-52903365)
chr1 (1-78)||(43492453-43492530)
chr1 (1-101)||(18471323-18471418)
chr1 (1-96)||(5927281-5927376)
chr1 (1-96)||(10577676-10577771)
chr1 (1-96)||(12918968-12919063)
chr1 (42-97)||(18556385-18556440)
chr1 (1-92)||(26830611-26830701)
chr1 (1-75)||(31015066-31015134)
chr1 (47-98)||(46940747-46940798)
chr1 (34-97)||(47989564-47989627)
chr1 (1-99)||(2896059-2896157)
chr1 (34-95)||(16297223-16297284)
chr1 (42-95)||(17778617-17778670)
chr1 (34-97)||(25361953-25362012)
chr1 (38-98)||(34741906-34741966)
chr1 (1-97)||(36878484-36878585)
chr1 (37-77)||(6427594-6427634)
chr1 (48-100)||(15765828-15765880)
chr1 (34-98)||(31694638-31694702)
chr1 (1-47)||(22881606-22881652)
chr1 (8-97)||(27965940-27966027)
chr1 (1-51)||(30749863-30749913)
chr1 (1-51)||(30771314-30771364)
chr1 (6-100)||(39130704-39130798)
chr1 (1-30)||(5944306-5944335)
chr1 (36-97)||(5944352-5944413)
chr1 (1-98)||(7918153-7918247)
chr1 (26-74)||(17831485-17831534)
chr1 (17-58)||(21530728-21530769)
chr1 (34-99)||(25934683-25934748)
chr1 (1-30)||(35919283-35919312)
chr1 (51-99)||(21365990-21366038)
[»] scaffold0652 (1 HSPs)
scaffold0652 (1-96)||(403-498)
[»] scaffold0050 (1 HSPs)
scaffold0050 (4-94)||(70304-70394)
[»] chr8 (43 HSPs)
chr8 (1-95)||(3025574-3025668)
chr8 (4-97)||(24413499-24413592)
chr8 (1-99)||(40332214-40332312)
chr8 (1-97)||(36450694-36450790)
chr8 (2-100)||(5813616-5813714)
chr8 (10-95)||(926730-926815)
chr8 (38-98)||(8343387-8343447)
chr8 (34-97)||(15816058-15816121)
chr8 (25-100)||(29510230-29510305)
chr8 (1-99)||(18407742-18407840)
chr8 (1-95)||(20679337-20679431)
chr8 (1-75)||(31557019-31557093)
chr8 (1-97)||(3951476-3951572)
chr8 (1-97)||(14134722-14134818)
chr8 (34-97)||(22652043-22652106)
chr8 (15-77)||(126307-126369)
chr8 (34-100)||(22197668-22197734)
chr8 (3-97)||(33405324-33405418)
chr8 (1-98)||(8342995-8343087)
chr8 (37-77)||(22943309-22943349)
chr8 (1-77)||(31580087-31580163)
chr8 (6-97)||(39820457-39820547)
chr8 (34-97)||(6065586-6065649)
chr8 (6-77)||(15023217-15023288)
chr8 (1-60)||(20873092-20873151)
chr8 (1-96)||(43737752-43737847)
chr8 (34-100)||(4673351-4673417)
chr8 (1-55)||(9414857-9414911)
chr8 (1-91)||(38079022-38079112)
chr8 (1-44)||(4948675-4948718)
chr8 (38-97)||(12570438-12570497)
chr8 (38-97)||(12570664-12570723)
chr8 (26-97)||(21465471-21465542)
chr8 (48-99)||(27213595-27213646)
chr8 (34-97)||(34450961-34451024)
chr8 (1-97)||(37283755-37283846)
chr8 (39-93)||(4122182-4122236)
chr8 (1-51)||(4786324-4786374)
chr8 (4-54)||(22596020-22596070)
chr8 (34-96)||(29447040-29447102)
chr8 (35-97)||(41837667-41837729)
chr8 (36-104)||(949198-949266)
chr8 (41-97)||(11803333-11803389)
[»] scaffold0003 (1 HSPs)
scaffold0003 (34-97)||(241661-241724)
[»] scaffold0083 (1 HSPs)
scaffold0083 (4-97)||(45470-45563)
[»] scaffold0053 (1 HSPs)
scaffold0053 (13-97)||(8833-8917)
[»] scaffold0793 (1 HSPs)
scaffold0793 (1-97)||(4821-4919)
[»] scaffold0361 (1 HSPs)
scaffold0361 (1-74)||(14553-14623)
[»] scaffold0475 (1 HSPs)
scaffold0475 (8-98)||(3338-3428)
[»] scaffold0086 (1 HSPs)
scaffold0086 (38-97)||(2999-3058)
[»] scaffold0019 (1 HSPs)
scaffold0019 (34-100)||(71792-71858)
[»] scaffold0009 (2 HSPs)
scaffold0009 (4-97)||(174493-174586)
scaffold0009 (4-97)||(180006-180099)
[»] scaffold0512 (1 HSPs)
scaffold0512 (15-97)||(4976-5058)
[»] scaffold0450 (1 HSPs)
scaffold0450 (35-97)||(8564-8626)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-75)||(90866-90940)
[»] scaffold0004 (1 HSPs)
scaffold0004 (34-96)||(92878-92940)
[»] scaffold0246 (1 HSPs)
scaffold0246 (1-77)||(19598-19679)
[»] scaffold0380 (1 HSPs)
scaffold0380 (39-99)||(8662-8722)
[»] scaffold0171 (2 HSPs)
scaffold0171 (1-37)||(23534-23570)
scaffold0171 (1-30)||(23443-23472)
[»] scaffold0136 (1 HSPs)
scaffold0136 (34-98)||(3777-3841)
[»] scaffold0008 (1 HSPs)
scaffold0008 (3-37)||(263372-263406)
[»] scaffold0697 (1 HSPs)
scaffold0697 (17-58)||(1683-1724)
[»] scaffold0103 (1 HSPs)
scaffold0103 (47-96)||(51892-51941)
[»] scaffold0044 (2 HSPs)
scaffold0044 (1-30)||(53203-53232)
scaffold0044 (34-90)||(53247-53303)
[»] scaffold0223 (1 HSPs)
scaffold0223 (1-37)||(20195-20231)
[»] scaffold0057 (1 HSPs)
scaffold0057 (34-99)||(24091-24157)


Alignment Details
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 35161059 - 35161310
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  35161059 atcacataattcagtgtaattataagtatcagagtcggacacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcataggtt 35161158  T
Q  101 tagtgttatgcattattaagtaatgaatttgattttttgtttgtttgtaaaaactcggtatccaggatgaatcccatcgtccacagcggggtccatttat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35161159 tagtgttatgcattattaagtaatgaatttgattttttgtttgtttgtaaaaactcggtatccaggatgaatcccatcgtccacagcggagtccatttat 35161258  T
Q  201 atatgggctaagccacataaattggaaccggaaggattcaaacctgatatct 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35161259 atatgggctaagccacataaattggaaccggaaggattcaaacctgatatct 35161310  T

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Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 23293022 - 23292926
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||||| |||||| ||||||| | |||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||    
T  23293022 atcacataattcagtataattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

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Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 35158021 - 35157925
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||| |||||||||||||||||| | ||| |||||||||| ||||| |||||||||||||| |||||||| || ||||||||||||||||    
T  35158021 atcacataatttagtgtaattataagtgtcggtgtctgacacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcatag 35157925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 8423754 - 8423658
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||  ||||||||||||| |||||||||||| || || ||||||||| ||||||    
T  8423754 atcacataattcagtgtaattataaatgtcggtgtcggacacgacagctgtccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcatag 8423658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 28964284 - 28964188
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||||||||| ||||||| | |||||||||||||| | |||||||| || |||||||||||||||  | ||||| ||||||||||    
T  28964284 atcacataattcagtgtaattacaagtgtctgtgtcggacacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcatag 28964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 49431049 - 49431125
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    |||||||||||||||||||||| ||||||| | |||||||||||||||||||| ||||||| |||||||| ||||||    
T  49431049 atcacataattcagtgtaattaaaagtgtcggtgtcggacacgacacgtgtccaacaccgggacacgccttatccga 49431125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 21945529 - 21945602
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    ||||||||||||||||||| ||||||| | |||||||| ||||| |||||||||||| ||||||||||||||||    
T  21945529 acataattcagtgtaattacaagtgtcggtgtcggacatgacacatgtccgacaccgcaacacgcctaatccga 21945602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 12895310 - 12895214
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||  ||||||||||||||||| | ||||||||||||| || ||||||| ||| |||||||||||||||  | ||| ||||||||||||    
T  12895310 atcacataattttgtgtaattataagtgtcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatag 12895214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 34306828 - 34306744
Alignment:
Q  13 agtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||  |||||||||||| ||  ||||| ||||||||||||    
T  34306828 agtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcatag 34306744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 54580059 - 54580006
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccg 54  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  54580059 atcacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccg 54580006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 3947798 - 3947702
Alignment:
Q  5 cataattcagtgtaattataagtgtca-----gagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    |||||||||||||||||| ||||||||     | |||||||||||||||||||||||||| | |||| ||||||||||  | |||||||||||||||    
T  3947798 cataattcagtgtaattacaagtgtcagtgtcgtgtcggacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 12797374 - 12797282
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttc 93  Q
    |||||||||||||||||||||| ||||||| | ||||||||||| || |||| |||||||| ||| | |||||||||  ||||| ||||||||    
T  12797374 atcacataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtctgacaccgggacaagtctaatccgaggaatgttcgtgcttc 12797282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 715643 - 715545
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtc--ggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||||||||| ||||||  | |||  | ||||||||| |||||||||| || |||||||||||||||  | ||||||||||||||||    
T  715643 atcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 715545  T

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Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 752969 - 752871
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtc--ggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||||||||| ||||||  | |||  | ||||||||| |||||||||| || |||||||||||||||  | ||||||||||||||||    
T  752969 atcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 36635347 - 36635449
Alignment:
Q  1 atcacataattcagtgtaattataagtgtc------agagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttca 94  Q
    |||||||||||||||||||||||| ||||       || ||| ||||||||||| ||| |||||||| |||||||||||||||| | |||||||||||||    
T  36635347 atcacataattcagtgtaattatatgtgttcgtgtgagtgtcagacacgacacgcgtcagacaccgggacacgcctaatccgaagagtgtccgtgcttca 36635446  T
Q  95 tag 97  Q
    |||    
T  36635447 tag 36635449  T

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Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 16073421 - 16073515
Alignment:
Q  5 cataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    |||||||||||||||||| ||||||| | ||||||||||| || ||||||||||    |||||||||||||||  | ||||| ||||||||||||    
T  16073421 cataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcataggt 16073515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 29205467 - 29205533
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacg 67  Q
    |||||||||||||||||||||| ||||||| | || ||||||||||| ||||||||||||| |||||    
T  29205467 atcacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtccgacaccgggacacg 29205533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 30982866 - 30982808
Alignment:
Q  38 gacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    |||||||||||||||||||||||| ||||||||||||| || | |||||||||||||||    
T  30982866 gacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 2362008 - 2361915
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||| |||||||||| ||||||| | |||||||||||| |||||| |||||||  |||| ||||||| ||  | ||||||||||||||||    
T  2362008 acataatttagtgtaattaaaagtgtcggtgtcggacacgactcgtgtctgacaccgagacacacctaatctgacgagtgtccgtgcttcatag 2361915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 38847040 - 38846975
Alignment:
Q  9 attcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatc 74  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||| |||||  |||||||    
T  38847040 attcagtgtaattacaagtgtcagtgtcggatacgacacgtgtccgacaccagaacatacctaatc 38846975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 40179672 - 40179596
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    |||||||||||||||||||||||| | ||| | |||||||||||||| ||| |||||||   |||||||||||||||    
T  40179672 atcacataattcagtgtaattatatgcgtcggtgtcggacacgacacatgttcgacaccatgacacgcctaatccga 40179596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4157459 - 4157531
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaat 73  Q
    ||||||||||| |||| ||||| ||||||| | |||||||||||||| ||||||||||||  | |||||||||    
T  4157459 atcacataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacaccgagaaacgcctaat 4157531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 42640552 - 42640643
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||||||||| ||||||| | ||||     |||||||||||| |||| | |||||||||||||||  | | ||||||||||||||    
T  42640552 atcacataattcagtgtaattacaagtgtcggtgtcg-----gacacgtgtccggcaccaggacacgcctaatccgaggagtttccgtgcttcatag 42640643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 4157172 - 4157231
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccg 60  Q
    ||||||||||| |||| ||||| ||||||| | |||||||||||||| ||||||||||||    
T  4157172 atcacataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacaccg 4157231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 8402778 - 8402705
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatcc 75  Q
    |||| ||||||||||||||||||| || |||| ||| |||||||||| |||||||||| || ||| |||||||||    
T  8402778 atcatataattcagtgtaattatatgtctcagtgtcagacacgacacttgtccgacacagg-acatgcctaatcc 8402705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 19482738 - 19482800
Alignment:
Q  37 ggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    |||||||||||||||||||||| || |||| ||||||||||  | ||| ||||||||||||||    
T  19482738 ggacacgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcataggt 19482800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9996863 - 9996936
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatc 74  Q
    ||||||||||||||| |||||||| || || | ||| ||||  ||||||||||||||| ||||||| |||||||    
T  9996863 atcacataattcagtataattatatgtctcggtgtcagacataacacgtgtccgacactggaacacacctaatc 9996936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 22234878 - 22234817
Alignment:
Q  38 gacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    |||||||||||||||||||||| | ||||  ||||||||| || ||| ||||||||||||||    
T  22234878 gacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcataggt 22234817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 40481659 - 40481740
Alignment:
Q  1 atcacataattcagtgtaattataagtgtca-----gagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    |||||||||||||||||||||| |||||| |     | || |||||||||||||||||||||||| ||||| | ||||||||    
T  40481659 atcacataattcagtgtaattacaagtgttatgtcggtgttggacacgacacgtgtccgacaccgaaacacacttaatccga 40481740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 482272 - 482185
Alignment:
Q  3 cacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    ||||||||||||||||||||||| |||| | ||||     |||||||||| |||||| ||||||| |||||||||  | ||||| ||||||||    
T  482272 cacataattcagtgtaattataactgtcggtgtcg-----gacacgtgtctgacacctgaacacgtctaatccgatgagtgtccatgcttcat 482185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 5654566 - 5654522
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaa 78  Q
    ||||||||||| |||| ||||||||||||| ||||||||||||||    
T  5654566 gtcggacacgatacgtatccgacaccggaatacgcctaatccgaa 5654522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 29205527 - 29205587
Alignment:
Q  37 ggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||| |||||||||| || |||||||||||||||  | ||| ||||||||||||    
T  29205527 ggacacgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatag 29205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 5414172 - 5414101
Alignment:
Q  26 gtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||| ||||||||||||||||||| ||||| || |||| ||| |||| |  | ||||||||||||||||    
T  5414172 gtgtcagtgtcggacacgacacgtgtctgacacagggacacaccttatccaaggagtgtccgtgcttcatag 5414101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 20743261 - 20743210
Alignment:
Q  42 cgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttc 93  Q
    |||||||||||||||||||||||||  |||||||||  | ||||||||||||    
T  20743261 cgacacgtgtccgacaccggaacacatctaatccgatgagtgtccgtgcttc 20743210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 27706169 - 27706110
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttc 93  Q
    |||||||||||||||| ||||| ||||| |||||||||||| ||  ||||| ||||||||    
T  27706169 gtcggacacgacacgtatccgataccgggacacgcctaatctgaggaatgtacgtgcttc 27706110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 28084589 - 28084640
Alignment:
Q  43 gacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttca 94  Q
    |||||||||||||||| || |||||||||||||||  | |||||||||||||    
T  28084589 gacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 37203324 - 37203371
Alignment:
Q  50 gtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||| ||||| ||||||||| || ||||||||||||||||    
T  37203324 gtccgacaccgggacacgtctaatccgagaagtgtccgtgcttcatag 37203371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 53381594 - 53381527
Alignment:
Q  34 gtcggacac-gacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    ||||||||| ||| ||| ||||||||||| |||| ||||||||||  | |||||||||||||||||||    
T  53381594 gtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcataggtt 53381527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 3064926 - 3064864
Alignment:
Q  39 acacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggttt 101  Q
    ||||||||| |||||||| | |  |||||||||||||||  | ||||||||||||||||||||    
T  3064926 acacgacacatgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcataggttt 3064864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10499306 - 10499260
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacac 47  Q
    ||||||||||| |||||||||||| ||||||| ||||||| ||||||    
T  10499306 atcacataatttagtgtaattatatgtgtcagtgtcggacccgacac 10499260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 11650740 - 11650678
Alignment:
Q  35 tcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||| || ||||||| | ||||||| |||||||||| | ||||||| ||||||||    
T  11650740 tcggacacgacatgtatccgacaacagaacacgtctaatccgaagagtgtccgttcttcatag 11650678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 30094083 - 30094133
Alignment:
Q  48 gtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    ||||| |||||||| |||||||||||||||| | |||||||||| ||||||    
T  30094083 gtgtcggacaccgggacacgcctaatccgaagagtgtccgtgctacatagg 30094133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 30838269 - 30838335
Alignment:
Q  26 gtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgctt 92  Q
    ||||||| ||||||| ||||||||||||||||||   |||||||||| ||||  | |||||||||||    
T  30838269 gtgtcagtgtcggacgcgacacgtgtccgacaccaagacacgcctaacccgaggagtgtccgtgctt 30838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 31
Target Start/End: Complemental strand, 14126146 - 14126117
Alignment:
Q  2 tcacataattcagtgtaattataagtgtca 31  Q
    ||||||||||||||||||||||||||||||    
T  14126146 tcacataattcagtgtaattataagtgtca 14126117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 19312402 - 19312463
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    |||||| ||||||||||||||||||||  ||||| |||||| || || |||||||| |||||    
T  19312402 gtcggatacgacacgtgtccgacaccgagacacgtctaatctgagaagtgtccgtgtttcat 19312463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 24613689 - 24613628
Alignment:
Q  38 gacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    ||||||||||||||| |||||| | ||||| ||||||| |  | ||||||||||||||||||    
T  24613689 gacacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgcttcataggt 24613628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 903992 - 904052
Alignment:
Q  37 ggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||| ||||||||||| || ||||  ||||||| | |||||||| ||||||||||    
T  903992 ggacacgacatgtgtccgacactgggacacatctaatccaagaaatgtccttgcttcatag 904052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 18513224 - 18513172
Alignment:
Q  48 gtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    |||||||||||| | |||||||||||| ||  | |||||||||||||||||||    
T  18513224 gtgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcataggtt 18513172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 36509128 - 36509052
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    ||||||||||  |||||||||||| ||||| | ||||||| ||||||||||| || ||| | |||||  ||||||||    
T  36509128 atcacataatcaagtgtaattatatgtgtcggcgtcggacgcgacacgtgtctgataccaggacacgtttaatccga 36509052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 8e-30; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 43564904 - 43565002
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||| ||||||||| |||| ||||||||||||||| || ||||||||||||||||||    
T  43564904 atcacataatttagtgtaattataagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcataggt 43565002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 21191092 - 21190998
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    |||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||| |||| |||||||||||||||  | ||||||||||||||    
T  21191092 atcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 21576781 - 21576685
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||||||||| |||||||   ||||||||||||||||||| ||||| || |||||||||||||||  | ||||||||||||||||    
T  21576781 atcacataattcagtgtaattacaagtgtcgatgtcggacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 28588710 - 28588611
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    |||||||||||||||||||||||| ||||| | |||||||||||||| | || |||||| | |||||| ||||||||| | ||||| |||||||||||||    
T  28588710 atcacataattcagtgtaattataggtgtcggtgtcggacacgacacatatctgacaccaggacacgcttaatccgaagagtgtccatgcttcataggtt 28588611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 30502424 - 30502350
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatcc 75  Q
    ||||| |||||||||||||||||| ||||| | |||||||||||||| |||||||||| || ||| |||||||||    
T  30502424 atcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatcc 30502350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 30542767 - 30542693
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatcc 75  Q
    ||||| |||||||||||||||||| ||||| | |||||||||||||| |||||||||| || ||| |||||||||    
T  30542767 atcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatcc 30542693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 16304460 - 16304366
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||| |||||| ||||||||| |  |||||||  |||||||||||||||| |||||||||  ||||| |||||||||  ||||||||||||||||||    
T  16304460 atcatataatttagtgtaattgt--gtgtcagtatcggacacgacacgtgcccgacaccgagacacgtctaatccgaggaatgtccgtgcttcatag 16304366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 30098387 - 30098456
Alignment:
Q  28 gtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||| ||||||||||||||||||| |||||| | |||| ||||||||||  ||||||||||||||||||    
T  30098387 gtcagtgtcggacacgacacgtgtcagacaccaggacacacctaatccgaggaatgtccgtgcttcatag 30098456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 6770566 - 6770658
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    |||||||||||||||||| ||||  ||||||| |||||||||||||| ||||     | || |||||||||||||||| | |||||||||||||||||||    
T  6770566 atcacataattcagtgtacttat--gtgtcagtgtcggacacgacacatgtc-----ctggtacacgcctaatccgaagagtgtccgtgcttcataggtt 6770658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42893383 - 42893455
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaat 73  Q
    |||||||||| ||||||||||| ||||||| | ||| ||||| |||||||||||||||| | |||||||||||    
T  42893383 atcacataatccagtgtaattacaagtgtcggtgtcagacacaacacgtgtccgacaccaggacacgcctaat 42893455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 21522817 - 21522880
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||||||||||| |||||| ||||||||||||| || | ||||||||| ||||||    
T  21522817 gtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21522880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 21533383 - 21533446
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||||||||||| |||||| ||||||||||||| || | ||||||||| ||||||    
T  21533383 gtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21533446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 21542097 - 21542159
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    |||||||||||||||||||||||||||| ||||||| ||||| |  ||||||||||| |||||    
T  21542097 gtcggacacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcatcata 21542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 31084346 - 31084447
Alignment:
Q  1 atcacataattcagtgtaattataagtgtca-----gagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    ||||||||||||| |||||||| |||||||      | ||||||||||||||||||||||||| || ||| |||||||||||  | |||||||| |||||    
T  31084346 atcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacgacacgtgtccgacactgggacatgcctaatccgaggagtgtccgtggttcat 31084445  T
Q  96 ag 97  Q
    ||    
T  31084446 ag 31084447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 5182725 - 5182673
Alignment:
Q  45 cacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||| |||||||||||  |||||||||||||| ||||||||||||||||||||    
T  5182725 cacgagtccgacaccgagacacgcctaatccggaaaatgtccgtgcttcatag 5182673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 14873578 - 14873642
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    ||||||| | |||||||||| ||||||| |||||||||||||||  | |||||||||||||||||    
T  14873578 gtcggacgcaacacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcatagg 14873642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18421877 - 18421817
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccgg 61  Q
    |||||||||| ||||||||||||| ||||| | |||||||||||||| |||||| ||||||    
T  18421877 atcacataatccagtgtaattatatgtgtcggcgtcggacacgacacatgtccggcaccgg 18421817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 21194159 - 21194063
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||| |||||||||||||||| || |  | || ||||||||||| |||| ||||||||  ||||||||||||||  | ||||||||||| ||||    
T  21194159 atcacatcattcagtgtaattataggtattggtgttggacacgacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctttatag 21194063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 32630766 - 32630715
Alignment:
Q  6 ataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgaca 57  Q
    |||||||| |||||||||| ||||||| |||||| |||||||||||||||||    
T  32630766 ataattcaatgtaattatatgtgtcagtgtcggatacgacacgtgtccgaca 32630715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 39698608 - 39698671
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||| || ||||||||||  |||||||||||||||  | ||||||||||||||||    
T  39698608 gtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15884011 - 15884057
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacac 47  Q
    |||||||||||||||||||||| ||||||| | ||||||||||||||    
T  15884011 atcacataattcagtgtaattacaagtgtcggtgtcggacacgacac 15884057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 26312798 - 26312868
Alignment:
Q  7 taattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    |||||||||||||||||| || || | ||||||||||| ||||||| |||||| | |||| ||||||||||    
T  26312798 taattcagtgtaattatatgtatcggtgtcggacacgatacgtgtctgacaccaggacacacctaatccga 26312868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 27932261 - 27932355
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    ||||||||||||||||||| || | |  | ||||||||||||||||||| |||||| | ||||||||||| |||  | |||  ||||||||||||    
T  27932261 acataattcagtgtaattacaaatcttggtgtcggacacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcatagg 27932355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 30099070 - 30099000
Alignment:
Q  5 cataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatcc 75  Q
    |||||||| ||||||||||| ||||| | |||||| |||||||||||| ||||| || |||||||| ||||    
T  30099070 cataattctgtgtaattatatgtgtcggtgtcggatacgacacgtgtctgacacggggacacgccttatcc 30099000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 39268598 - 39268541
Alignment:
Q  37 ggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttca 94  Q
    |||||||||| ||||||||||| || |||||||||||||||  | |||||||||||||    
T  39268598 ggacacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 43001861 - 43001922
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    |||||||||||||||||||  ||||| | |||||||||||||||  | ||||||||||||||    
T  43001861 gtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 6326296 - 6326252
Alignment:
Q  54 gacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    |||||||||||||||||||| ||| || |||||||||||||||||    
T  6326296 gacaccggaacacgcctaattcgagaagtgtccgtgcttcatagg 6326252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 15382544 - 15382584
Alignment:
Q  37 ggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  15382544 ggacacgacacatgtccgacaccgggacacgcctaatccga 15382584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6247645 - 6247692
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacg 48  Q
    |||||||||||||||||||||| ||||||| | |||||||||| ||||    
T  6247645 atcacataattcagtgtaattacaagtgtcggtgtcggacacggcacg 6247692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 21351899 - 21351852
Alignment:
Q  48 gtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    ||||||||||| |||||||| |||||||||| | ||||||||||||||    
T  21351899 gtgtccgacactggaacacgtctaatccgaagagtgtccgtgcttcat 21351852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 23016025 - 23015926
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagt-----cggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    |||||||||||||||||||||||| |||||   ||     ||||||||||| ||||||||||  || |||||||||||||||  | |||||| |||||||    
T  23016025 atcacataattcagtgtaattataggtgtcgatgttgtatcggacacgacatgtgtccgacattgggacacgcctaatccgaggagtgtccgagcttcat 23015926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 30183620 - 30183675
Alignment:
Q  38 gacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttc 93  Q
    ||||||||||||||||||||| || ||||||||||| ||| || |||| |||||||    
T  30183620 gacacgacacgtgtccgacactgggacacgcctaattcgagaagtgtctgtgcttc 30183675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 6326330 - 6326292
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacac 42  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  6326330 acataattcagtgtaattacaagtgtcagcgtcggacac 6326292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 6401557 - 6401627
Alignment:
Q  26 gtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    ||||||| ||||||||||||||||||| ||||| || | |||||| |||| |  | |||||||||||||||    
T  6401557 gtgtcagtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 6401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 19820388 - 19820328
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||   ||||||||||||| |||||||||||| ||  | ||||||||||||||||    
T  19820388 gtcggacacgac---tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcatag 19820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 4105282 - 4105374
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttc 93  Q
    |||||||||||||||||||||| ||||||  |  || ||| ||| | ||||| || || || |||||||||||||||  | ||||||||||||    
T  4105282 atcacataattcagtgtaattacaagtgtaggtatcagactcgatatgtgtctgatactgggacacgcctaatccgaggagtgtccgtgcttc 4105374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 17088358 - 17088390
Alignment:
Q  45 cacgtgtccgacaccggaacacgcctaatccga 77  Q
    ||||||||||||||||| |||||||||||||||    
T  17088358 cacgtgtccgacaccgggacacgcctaatccga 17088390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 17123107 - 17123166
Alignment:
Q  37 ggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||| || |||||||||| ||| ||||||||||||||  | ||||||||||||||||    
T  17123107 ggacacgaaacatgtccgacacggga-cacgcctaatccgaggagtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 23290049 - 23289997
Alignment:
Q  46 acgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    ||||||| |||||||| ||||| ||||||| |  |||||||||||||||||||    
T  23290049 acgtgtctgacaccgggacacgtctaatccaagcaatgtccgtgcttcatagg 23289997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 35017110 - 35017162
Alignment:
Q  45 cacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||| ||| ||| |||||||||||||||  | ||||||||||||||||    
T  35017110 cacgtgtccaacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 35017162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 42029775 - 42029871
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||| |||||||||| || || | |||||||||||||| |||| | |||    |||||||| ||||||  | ||||||||| ||||||    
T  42029775 atcacataattcaatgtaattatatgtatcggtgtcggacacgacacatgtctgtcacgtagacacgccttatccgaggagtgtccgtgcatcatag 42029871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 40993371 - 40993273
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    |||||||||||||||||||||||| ||||| | |||||||||||||| ||||||||||||| |||||||||||||||  | ||||| ||||||||||||    
T  40993371 atcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcataggt 40993273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 55401098 - 55401194
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||| |||||||||| ||||||| | |||||||||||||||||||||||||||  |||||||||||||||  | ||||||||||||||||    
T  55401098 atcacataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 20503491 - 20503584
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||||||||| ||||||| | || ||||||||||| |||| |||||||| |||||||||||||||  | ||||||||||||||||    
T  20503491 acataattcagtgtaattacaagtgtcggtgttggacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 10954975 - 10955051
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    |||||||||||||||||||| | ||||||| | ||||||||||||||||||||||||| || |||||||||||||||    
T  10954975 atcacataattcagtgtaatcacaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccga 10955051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 3631708 - 3631796
Alignment:
Q  2 tcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgc 90  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||| | ||||||||| |||||  | |||||||||    
T  3631708 tcacataattcagtgtaattatatgtgccagtgtcggacacgacacatgtccgacaccaggacacgcctagtccgaggagtgtccgtgc 3631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 41961641 - 41961577
Alignment:
Q  35 tcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    |||||||||||||||||||||||| || ||||||||||||||| || ||||||||||||||||||    
T  41961641 tcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcataggt 41961577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 11252001 - 11252095
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||||||||||  ||||| | ||| ||||| ||||||||||| || |||||||||||||||||||  | |||| |||||||||||    
T  11252001 atcacataattcagtgtaattat--gtgtcggtgtcagacacaacacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgcttcatag 11252095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 27505269 - 27505370
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcg-----gacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    ||||||||||| |||||||||| ||||||| | ||||     |||||||||||||||||||||||| ||| |||||||||||  | ||||||||||||||    
T  27505269 atcacataattaagtgtaattacaagtgtcggtgtcgtgtctgacacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcat 27505368  T
Q  96 ag 97  Q
    ||    
T  27505369 ag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28918024 - 28918100
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcg--gacacgacacgtgtccgacaccggaacacgcctaatcc 75  Q
    |||||||||||||||||||||| ||||||| | ||||  ||||||||||||||||||||| || |||||||||||||    
T  28918024 atcacataattcagtgtaattacaagtgtcggtgtcgtggacacgacacgtgtccgacactgggacacgcctaatcc 28918100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 23657762 - 23657858
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||| |||||||||||||||||||| | || | |||||||| ||||  ||||||| ||||| |||| ||||||||||||| ||||||| ||||||||    
T  23657762 atcatataattcagtgtaattataaatatcggtgtcggacatgacatttgtccgataccgggacacacctaatccgaaaagtgtccgtacttcatag 23657858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 35222961 - 35223057
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||| |||||||||| ||||| | |||||||| |||||||||| ||||| || |||||| | ||||||  | ||||||||||||||||    
T  35222961 atcacataattcaatgtaattatatgtgtcggtgtcggacatgacacgtgtctgacacggggacacgctttatccgaggagtgtccgtgcttcatag 35223057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 25775532 - 25775624
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    |||||||||||||||||||||| ||||||| | ||||||||||   ||||||||||||| | |||||||||||||||  | ||| ||||||||||    
T  25775532 atcacataattcagtgtaattacaagtgtcggtgtcggacacg--tcgtgtccgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 25775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 7171524 - 7171598
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatcc 75  Q
    |||| ||||||| ||||||||| ||||||  | |||||||||||||||||||||||||||  |||||||||||||    
T  7171524 atcatataattcggtgtaattacaagtgttggtgtcggacacgacacgtgtccgacaccgcgacacgcctaatcc 7171598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 8789586 - 8789489
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacg--acacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    |||||||||||| ||||||||||| ||||| | ||||||||||  |||| |||| |||||||  |||||||||||||||  | |||||||||||||||    
T  8789586 atcacataattccgtgtaattatatgtgtcggtgtcggacacgacacacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttcata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 18426972 - 18427068
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||| |||||||||||  |||| | |||||| |||||||||||||| |||||| |||| ||||||| ||  | |||||||| |||||||    
T  18426972 atcacataattcggtgtaattatatatgtcggtgtcggatacgacacgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcatag 18427068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 24205074 - 24204983
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacac-gacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    ||||||| ||||||||||||||||||| | ||||||||| ||| ||||||||||||| | ||||||||||| |||  | ||||||||||||||    
T  24205074 acataatacagtgtaattataagtgtc-gtgtcggacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 24204983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 26492234 - 26492142
Alignment:
Q  8 aattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    ||||||||||||||| |||| || | |||||||||||||| |||| ||||||   ||||| |||||||||  |||||||| ||||||||||||    
T  26492234 aattcagtgtaattacaagtatcggtgtcggacacgacacatgtctgacaccaagacacgtctaatccgaggaatgtccgcgcttcataggtt 26492142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 15796286 - 15796223
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||| |||||||||| ||||||||||||||||||||| || | ||| ||||||||||||    
T  15796286 gtcggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttcatag 15796223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 34185115 - 34185052
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||| |||| |||||||||||||| |||||||||||||||  | ||||||||||||||||    
T  34185115 gtcggacaagacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 49651777 - 49651714
Alignment:
Q  36 cggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    |||||||||||| | ||||||||||| |||| |||||||||| || ||||||||||||||||||    
T  49651777 cggacacgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgcttcataggt 49651714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 4987280 - 4987222
Alignment:
Q  37 ggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    ||||||||||||||||||||||||| |||||||||||||||  | ||||||| ||||||    
T  4987280 ggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 14216959 - 14217021
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    |||||||||||||||||| |||||| || |||| |||||||||| || |||||||||||||||    
T  14216959 gtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 14223088 - 14223150
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    |||||||||||||||||| |||||| || |||| |||||||||| || |||||||||||||||    
T  14223088 gtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 13845561 - 13845465
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||| ||| ||||||||||||| ||||| | ||||||||||| ||||||| ||||| |  |||||||| |||| |  | ||||||||||||||||    
T  13845561 atcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgagacgtgtctgacacggagacacgccttatccaaggagtgtccgtgcttcatag 13845465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 16000049 - 15999951
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacg------acacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    |||||||||||||||| || ||||||| | ||||||||||      |||||||||||||||||| ||||||||||||| |  | ||||||||| |||||    
T  16000049 acataattcagtgtaactacaagtgtcggtgtcggacacgtacacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 14209180 - 14209246
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    |||||||||||||||||| ||||| ||| | || |||||||| | || |||||||||||||||||||    
T  14209180 gtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcataggtt 14209246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 14832167 - 14832205
Alignment:
Q  35 tcggacacgacacgtgtccgacaccggaacacgcctaat 73  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  14832167 tcggacacgacacgtgtccgacaccgggacacgcctaat 14832205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 32804576 - 32804485
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    ||||||||||| |||||||||||| |||||    ||||||||||||| |||||| ||| | || |||||||||| ||  | |||||||||||||||    
T  32804576 atcacataatttagtgtaattatatgtgtc----tcggacacgacacatgtccgccactgaaaaacgcctaatctgaggagtgtccgtgcttcata 32804485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 40052380 - 40052434
Alignment:
Q  46 acgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    |||||||||||||||| |||||||||||||||  | ||| |||||||||||||||    
T  40052380 acgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcataggtt 40052434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25093525 - 25093582
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacac 58  Q
    |||||| ||||||||||||||||| ||||| | ||||||||| |||| ||||||||||    
T  25093525 atcacacaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacac 25093582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 29508506 - 29508567
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    ||||||||||||||  |||||||||||| ||||| ||||||| | || ||||||||||||||    
T  29508506 gtcggacacgacacacgtccgacaccgggacacgtctaatccaagaagtgtccgtgcttcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 2941581 - 2941637
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgaca 57  Q
    |||||| ||| ||||||||||||| ||||| | ||||||||||||||||||| ||||    
T  2941581 atcacaaaatacagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgaca 2941637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24633437 - 24633365
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaat 73  Q
    ||||| ||||||| |||||||||| ||||| | || ||||||||||| ||||  ||||||| |||||||||||    
T  24633437 atcacgtaattcaatgtaattatatgtgtcggtgttggacacgacacttgtctaacaccggtacacgcctaat 24633365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 3865698 - 3865749
Alignment:
Q  2 tcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtcc 53  Q
    |||||||||||||| |||||| ||||||| | ||| ||||||||||||||||    
T  3865698 tcacataattcagtataattacaagtgtcggtgtctgacacgacacgtgtcc 3865749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 15864861 - 15864950
Alignment:
Q  6 ataattcagtgtaattataagtgtcagagtcggacac-gacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    |||||| |||||||| ||| ||||| | ||||||||| |||||||||| ||||| ||| |||||||||||| || | |||||||||||||||    
T  15864861 ataatttagtgtaatcataggtgtc-gtgtcggacaccgacacgtgtctgacacggga-cacgcctaatccaaagagtgtccgtgcttcata 15864950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 45451576 - 45451635
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccg 60  Q
    |||||||| |||||| |||| ||| ||||| | |||||||||||||| ||||||||||||    
T  45451576 atcacatacttcagtataataatatgtgtcggtgtcggacacgacacatgtccgacaccg 45451635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7928473 - 7928515
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacg 43  Q
    |||||||||||||||||||||||| ||||| | ||||||||||    
T  7928473 atcacataattcagtgtaattatatgtgtcggtgtcggacacg 7928515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8383280 - 8383322
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacg 43  Q
    |||| ||||||||||||||||||||||||| | ||||||||||    
T  8383280 atcatataattcagtgtaattataagtgtcggtgtcggacacg 8383322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 17276792 - 17276846
Alignment:
Q  43 gacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||||||||  || | |||||||||| || ||||||||||||||||    
T  17276792 gacacgtgtccgacaccgagacgcacctaatccgagaagtgtccgtgcttcatag 17276846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 49505190 - 49505148
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacg 43  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||    
T  49505190 atcacataatttagtgtaattatatgtgtcagtgtcggacacg 49505148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 5407253 - 5407196
Alignment:
Q  43 gacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    |||||||||||||| || | ||||||||||||| || | ||||| |||||||||||||    
T  5407253 gacacgtgtccgacgccaggacacgcctaatccaaagagtgtccatgcttcataggtt 5407196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 25948923 - 25948895
Alignment:
Q  1 atcacataattcagtgtaattataagtgt 29  Q
    |||||||||||||||||||||||||||||    
T  25948923 atcacataattcagtgtaattataagtgt 25948895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 27903702 - 27903758
Alignment:
Q  42 cgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    |||| |||||| ||||| ||| || ||||||||||| || |||||||||||||||||    
T  27903702 cgacgcgtgtctgacactggatcatgcctaatccgagaagtgtccgtgcttcatagg 27903758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 51206389 - 51206293
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||||||||| || ||||||| | |||||||||    || |||||||||||| | ||  ||||||| |  | ||||||||||||||||    
T  51206389 atcacataattcagtgtaaatacaagtgtcggtgtcggacacatgtcgcgtccgacaccgggatacctctaatccaaggagtgtccgtgcttcatag 51206293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 2438755 - 2438661
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    |||||||||||||||||||||| ||||||| | |||||||||||||| ||||||||||||| |||||||||||||||  | ||||||||||||||    
T  2438755 atcacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 15972903 - 15972993
Alignment:
Q  8 aattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||||| |||| |||| ||||||||||| |||||||||||||||||||    
T  15972903 aattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcatagg 15972993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28596492 - 28596587
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    ||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||  | |||| ||||||||||  | |||||||||||||||    
T  28596492 atcacataagtcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 37559000 - 37559096
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||| |||||||| ||||||| | |||||||  ||||||||||||||||||| |||||| ||||||||  | ||||||||||||||||    
T  37559000 atcacataattcaatgtaattacaagtgtcggtgtcggacttgacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcatag 37559096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 18841046 - 18840953
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||| |||||||||| ||||||| | ||| |||||||||| ||||||||||||| |||| ||||||||||  | ||||||||||||||||    
T  18841046 acataattaagtgtaattacaagtgtcggtgtcagacacgacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 20242763 - 20242666
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    |||||||||||||||||||||||| ||||| | ||||||||| ||||||||| |||||  | |||||||| ||||||| | |||| ||||||||||||    
T  20242763 atcacataattcagtgtaattatatgtgtcggtgtcggacacaacacgtgtctgacacgaggacacgccttatccgaagagtgtctgtgcttcatagg 20242666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 38117195 - 38117099
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||| ||| ||||||||| ||||||  | ||||||||| |||||||||||||||||| |||||||||||||||    ||||||||||||||||    
T  38117195 atcacatacttcggtgtaattacaagtgttggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 5367215 - 5367289
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatcc 75  Q
    |||||||||||||||||||||||| ||||| | |||||||||||||| | |||||| |||| |||||||||||||    
T  5367215 atcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatatccgactccgggacacgcctaatcc 5367289  T

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Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30404886 - 30404813
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatc 74  Q
    |||||||||||||||||||||| ||||||| | |||||||||||||| ||||||||||| | ||| ||||||||    
T  30404886 atcacataattcagtgtaattacaagtgtcggcgtcggacacgacacatgtccgacaccaggacatgcctaatc 30404813  T

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Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 5040757 - 5040827
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgccta 71  Q
    ||||||||||||| |||||||| ||||||| | ||||||||||||| ||||||||| |||| |||||||||    
T  5040757 atcacataattcaatgtaattacaagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgccta 5040827  T

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Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 26769579 - 26769641
Alignment:
Q  35 tcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||||    
T  26769579 tcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

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Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 34994015 - 34993921
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    |||||||||| |||||||||| ||||||| |||| |||||||| ||||||||||| || ||||||||||| | |  | ||| |||||||||||||    
T  34994015 acataattcaatgtaattatatgtgtcagtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcatagg 34993921  T

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Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 37419810 - 37419876
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    |||||||||||  ||||||||||||||| |||||||||||||||  | |||||||||||||||||||    
T  37419810 gtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcataggtt 37419876  T

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Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 31808100 - 31808179
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaa 80  Q
    |||||||||||||||||||||||| ||||||| || | ||||||||| ||| ||||||| | |||| |||||||| ||||    
T  31808100 atcacataattcagtgtaattatatgtgtcagtgttgaacacgacacatgttcgacacctggacacacctaatccaaaaa 31808179  T

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Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 35056935 - 35056998
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||||||||||||||| | ||||||||||||| ||  | ||||||||||||||||    
T  35056935 gtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcatag 35056998  T

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Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 12224250 - 12224320
Alignment:
Q  5 cataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatcc 75  Q
    |||||| || |||||||| ||||||| | ||||||||||| ||||||||||||| || |||||||||||||    
T  12224250 cataatccaatgtaattacaagtgtcggtgtcggacacgatacgtgtccgacactgggacacgcctaatcc 12224320  T

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Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 21091749 - 21091839
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttca 94  Q
    ||||| ||||||||||||| ||||||||| ||| |||| | ||| |||| |||||||| |||| |||| |||||| | |||||||||||||    
T  21091749 acatacttcagtgtaattacaagtgtcagtgtcagacaagccacctgtcggacaccgggacacacctattccgaagagtgtccgtgcttca 21091839  T

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Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 37411280 - 37411204
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    ||||||||||||||||| |||||| |||||   |||| ||||||| |||||||||||| || ||||||||| |||||    
T  37411280 atcacataattcagtgtgattatatgtgtcgatgtcgaacacgacgcgtgtccgacactgggacacgcctagtccga 37411204  T

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Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 42511390 - 42511322
Alignment:
Q  29 tcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||| ||||||||| ||||||||||||||| || ||||| |||||||||  | ||||||||||||||||    
T  42511390 tcagtgtcggacacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 29176528 - 29176455
Alignment:
Q  2 tcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatcc 75  Q
    ||||||||||||||||||||||||||||  | || ||||||| ||| |||||||||| |  |||| ||||||||    
T  29176528 tcacataattcagtgtaattataagtgttggtgttggacacggcacatgtccgacactgagacacacctaatcc 29176455  T

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Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 24009319 - 24009414
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||| ||| |||||||| | || ||||| | ||||||||||||||||||| ||||| || |||||||| |||| |  | ||||||||||||||||    
T  24009319 atcacaaaatgcagtgtaaat-tatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 24009414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 31456616 - 31456560
Alignment:
Q  41 acgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||| ||||| ||  ||| |||||||| ||||||||||||||||||||||    
T  31456616 acgacacgtgttcgacatcgagacatgcctaatcggaaaaatgtccgtgcttcatag 31456560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 4207923 - 4207990
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggttt 101  Q
    |||||||||||||||||| |||||||| ||||||  ||||||||| | ||| | || |||||||||||    
T  4207923 gtcggacacgacacgtgttcgacaccgaaacacgtttaatccgaagagtgttcatgtttcataggttt 4207990  T

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Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 11223855 - 11223793
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||| |||| |||||||| |||||||||||| ||  | ||||||||||||||||    
T  11223855 gtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 11223793  T

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Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 14996221 - 14996179
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||    
T  14996221 gtcggacac-acacgtgtctgacaccggaacacgcctaatccga 14996179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 23058432 - 23058389
Alignment:
Q  49 tgtccgacaccggaacacgcctaatccgaaaaatgtccgtgctt 92  Q
    ||||||||||||| ||||||||||||||| || |||||||||||    
T  23058432 tgtccgacaccgggacacgcctaatccgagaagtgtccgtgctt 23058389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 30717522 - 30717459
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||||| |||||| || | ||||||||||| |  | ||||||||||||||||    
T  30717522 gtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 30717459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 36096367 - 36096304
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||||||||| ||||| || |||||||| | || || | ||||||||||||||||    
T  36096367 gtcggacacgacacgtgtctgacacggggacacgccttaaccaaagagtgtccgtgcttcatag 36096304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 18570998 - 18571068
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatc 74  Q
    |||||||||| |||||| ||| ||||||| |||| |||||| || | ||||||||| | ||||||||||||    
T  18570998 acataattcaatgtaatcatatgtgtcagtgtcgaacacgatacatatccgacaccaggacacgcctaatc 18571068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19536433 - 19536391
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacg 43  Q
    |||||||||||||||||||||| ||||||| | ||||||||||    
T  19536433 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 19536391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 19580303 - 19580225
Alignment:
Q  19 attataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||| || | ||||||||| |||||||||| |||||  |||||  |||||||||| | |||| |||||||||||    
T  19580303 attataagtatcggtgtcggacacaacacgtgtccaacaccaaaacacatctaatccgaagagtgtctgtgcttcatag 19580225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 29176414 - 29176364
Alignment:
Q  51 tccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggttt 101  Q
    |||||||||| |||||||||||||||| || ||| | ||||||||||||||    
T  29176414 tccgacaccgaaacacgcctaatccgagaagtgttcatgcttcataggttt 29176364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 15657931 - 15657992
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    ||||||| ||||||||||||||| |||| ||||||||| |||||  | ||||| ||||||||    
T  15657931 gtcggacgcgacacgtgtccgacgccgggacacgcctagtccgaggagtgtccatgcttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 19942321 - 19942382
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    |||||||||| || ||||| |||||||| |||||||||||||||  | ||||| ||||||||    
T  19942321 gtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 34007024 - 34006927
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacg-acacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    ||||||||||||||||| ||| ||||| | || ||||||  |  |||||| ||||||||||||| |||||| | |  | |||||||||||||||||||    
T  34007024 acataattcagtgtaatcataggtgtcggtgtgggacacctattcgtgtctgacaccggaacacacctaattcaaggagtgtccgtgcttcataggtt 34006927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 18054772 - 18054716
Alignment:
Q  41 acgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||| ||||| | ||||||||| |||| |  ||||||||||||||||||    
T  18054772 acgacacgtgtctgacacggaaacacgccttatccaaggaatgtccgtgcttcatag 18054716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 22084830 - 22084756
Alignment:
Q  26 gtgtcagagtcggacacgacacgtgtccgacacc---ggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||| ||||||||| ||||||||| ||||||   || |||||||||||||||  | |||| |||||||||||    
T  22084830 gtgtcagtgtcggacacaacacgtgtctgacaccaccgggacacgcctaatccgatgagtgtctgtgcttcatag 22084756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 27084325 - 27084365
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatc 74  Q
    |||||||||||||||||||| ||||||  ||||||||||||    
T  27084325 gtcggacacgacacgtgtccaacaccgagacacgcctaatc 27084365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 32749861 - 32749825
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcg 37  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  32749861 atcacataattcagtgtaataataagtgtcagtgtcg 32749825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 7e-27; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 21880178 - 21880271
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||||||||| ||||||| | |||||||||||||| ||||||||||| | ||||||||||||||| || ||||||||||||||||    
T  21880178 acataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcatag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 15680832 - 15680929
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    ||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||  ||||| ||||| |||  | |||||||||||||||||    
T  15680832 atcacataatttagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcatagg 15680929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 598231 - 598327
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||| ||||| | ||||||| |||||||| | ||| |||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||    
T  598231 atcacgtaattaaatgtaattgtaagtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 5409872 - 5409768
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcg-----gacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    |||||||||||||||| ||||| ||||||| | ||||     |||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||    
T  5409872 atcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 5409773  T
Q  96 aggtt 100  Q
    |||||    
T  5409772 aggtt 5409768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 13770717 - 13770810
Alignment:
Q  4 acataattcagtgtaattataagtgtca-----gagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgctt 92  Q
    ||||||||||||||||||| |||||||      | ||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||    
T  13770717 acataattcagtgtaattacaagtgtcgttgtcgtgtcggacacaacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 32287499 - 32287404
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    |||||||||||||||| || |||| ||||| | |||||||| |||| |||||||||||||| |||| ||||||||||  | |||||||||||||||    
T  32287499 atcacataattcagtgcaagtatatgtgtcggtgtcggacatgacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 43027505 - 43027404
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcg-----gacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    |||||||||| |||||||| || ||||||| | ||||     |||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||    
T  43027505 atcacataatgcagtgtaaatacaagtgtcggtgtcgtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcat 43027406  T
Q  96 ag 97  Q
    ||    
T  43027405 ag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 9778523 - 9778627
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcg-----gacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    ||||||||||||||| |||||| ||||||| | ||||     ||||| |||||||||||||||||| ||||||||||||| |  | ||||||||||||||    
T  9778523 atcacataattcagtataattacaagtgtcggtgtcgtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcat 9778622  T
Q  96 aggtt 100  Q
    |||||    
T  9778623 aggtt 9778627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 21864831 - 21864927
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||| |||||| |||||||||| |||||||   |||||||||||||||||||||||||||| ||||| ||||| |||  | |||| |||||||||||    
T  21864831 atcatataatttagtgtaattacaagtgtcgctgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatag 21864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 7197327 - 7197238
Alignment:
Q  7 taattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    ||||||| |||||||| ||||||| | ||||||||| |||| ||||||||||||| | || | || ||||| ||||||||||||||||||    
T  7197327 taattcaatgtaattacaagtgtcggtgtcggacacaacacatgtccgacaccgggatactcttattccgagaaatgtccgtgcttcata 7197238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 24105709 - 24105797
Alignment:
Q  9 attcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||| ||||||| ||||||| ||| ||| |||||||||||||| |||||||||| ||||  | |||  |||||||||||    
T  24105709 attcagtgtaattacaagtgtcggagtcgggcacaacatgtgtccgacaccgggacacgcctaacccgaggagtgtttgtgcttcatag 24105797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26733327 - 26733403
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    ||||||||||||||| |||||| | ||||| | |||||||||||| | ||||||| || ||||||||||||||||||    
T  26733327 atcacataattcagtctaattaaatgtgtcggtgtcggacacgacgcatgtccgatacgggaacacgcctaatccga 26733403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 8234172 - 8234243
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatcc 75  Q
    ||||||||||||||| ||| ||||| | | |||||||||||||| ||||||||||||  |||||||||||||    
T  8234172 acataattcagtgtagttacaagtgccggtgtcggacacgacacatgtccgacaccgagacacgcctaatcc 8234243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 20549814 - 20549909
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    ||||| |||||||||||||||||| ||||| | ||||||||| |||| |||||||||  |  |||||||||||||||  | || ||||||||||||    
T  20549814 atcacgtaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacaatgagacacgcctaatccgaggagtgcccgtgcttcata 20549909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 24339709 - 24339772
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||| ||||||||||| |||||||||||||||  | || |||||||||||||    
T  24339709 gtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcatag 24339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 32094056 - 32093954
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcg-----gacacgacacgtgtccgacacc-ggaacacgcctaatccgaaaaatgtccgtgcttca 94  Q
    |||||||||||||||||||||| || |||| | ||||     |||||||||||||||||||||| || |||||||||||||||  | ||| |||||||||    
T  32094056 atcacataattcagtgtaattacaaatgtcggtgtcgtgtcggacacgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttca 32093957  T
Q  95 tag 97  Q
    |||    
T  32093956 tag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 1401049 - 1401143
Alignment:
Q  2 tcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    |||||||||||||||||||||||||| || | ||| |||||||||  ||||||||| ||| |||| ||||||| ||  | ||||| |||||||||||    
T  1401049 tcacataattcagtgtaattataagtatcggtgtccgacacgaca--tgtccgacatcgggacacacctaatctgaggagtgtccatgcttcatagg 1401143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 33994236 - 33994309
Alignment:
Q  2 tcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatcc 75  Q
    ||||||||||||||| ||||| ||||||| | ||| |||||||||| ||||| ||||||  |||||||||||||    
T  33994236 tcacataattcagtgcaattacaagtgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatcc 33994309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 10359633 - 10359717
Alignment:
Q  12 cagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    ||||||||||||| |||||   |||||| |||||  |||||||||||||  ||||| |||||||||||  |||||||||||||||    
T  10359633 cagtgtaattataggtgtcgatgtcggatacgacttgtgtccgacaccgagacacgtctaatccgaaaggtgtccgtgcttcata 10359717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 18213069 - 18212973
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||| |||||||||||| ||||| | |||||||||||| | | || ||||| || |||||||| ||||||  | |||| |||||||||||    
T  18213069 atcacataatttagtgtaattatatgtgtcggtgtcggacacgacccctttctgacacggggacacgccttatccgaggagtgtctgtgcttcatag 18212973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 25481925 - 25482021
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||||||||| ||||||  | ||||||||||| | ||||||||||  | ||||||| |||| | || | | ||||||||||||||    
T  25481925 atcacataattcagtgtaattacaagtgttggtgtcggacacgatatgtgtccgacattgaaacacgcttaattcaaagagtatccgtgcttcatag 25482021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 42720926 - 42720830
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||| | |||||||||| ||||||| ||| ||||| ||| |||| | ||||||||||||| ||||| ||| || |||  |||||||||||    
T  42720926 atcacataattaaatgtaattatatgtgtcagtgtctgacacaacatgtgtacaacaccggaacacgtctaattcgataagtgtttgtgcttcatag 42720830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 11665432 - 11665370
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    |||| |||||||||||||||||||||| |||||  ||||| |||  |||||||||||||||||    
T  11665432 gtcgaacacgacacgtgtccgacaccgaaacacatctaatacgaggaatgtccgtgcttcata 11665370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 29763187 - 29763129
Alignment:
Q  39 acacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||||||||| | | |||||||||||||||  | ||||||||||||||||    
T  29763187 acacgacacgtgtccgacatcaggacacgcctaatccgaggagtgtccgtgcttcatag 29763129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 5835273 - 5835346
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    ||||||||||||||||||||| ||||| | ||| |||| |||| ||||| || ||||| |||||| ||||||||    
T  5835273 acataattcagtgtaattatatgtgtcggtgtcagacatgacatgtgtctgataccgggacacgcttaatccga 5835346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 9408309 - 9408265
Alignment:
Q  51 tccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    |||||||||  ||||||||||||||||| ||||||||||||||||    
T  9408309 tccgacaccaaaacacgcctaatccgaagaatgtccgtgcttcat 9408265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 1433515 - 1433578
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||| |||| |||||||||||| | ||||| |||||||||  | ||||||||||||||||    
T  1433515 gtcggacaagacatgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatag 1433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 2334316 - 2334379
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||| |||||||||| | |||||| |||||||||  | |||||||| |||||||    
T  2334316 gtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgtccgtgtttcatag 2334379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 17852056 - 17852119
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||| ||||||||||||||||||  |||| |||||| |||  | ||||||||||||||||    
T  17852056 gtcggacatgacacgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcatag 17852119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 18035900 - 18035806
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    |||||||||||||| ||||||| | ||||||| ||  || | ||||| |||| ||||| |||||||| |||||||||  | |||||||||||||||    
T  18035900 atcacataattcagcgtaattacatgtgtcagtgtgagataggacacatgtctgacac-ggaacacgtctaatccgaggagtgtccgtgcttcata 18035806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 21930687 - 21930758
Alignment:
Q  26 gtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||| || |||||| | ||||||||||| ||||||||| ||||||||||| |  |||| ||||||||||    
T  21930687 gtgtcagtgttggacacaagacgtgtccgacgccggaacacacctaatccgaagagagtccatgcttcatag 21930758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 22484052 - 22484143
Alignment:
Q  5 cataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    ||||||||||| |||||||| ||||| | ||| |||| ||||| ||||||||| ||  ||| | || |||||| || |||||||||||||||    
T  22484052 cataattcagtataattatatgtgtcggtgtcagacatgacacatgtccgacatcgagacatgtctgatccgagaagtgtccgtgcttcata 22484143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 30813866 - 30813916
Alignment:
Q  47 cgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||| | |||||||||||||||||  | ||||||||||||||||    
T  30813866 cgtgtccgacatcagaacacgcctaatccgaggagtgtccgtgcttcatag 30813916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 39138467 - 39138541
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatcc 75  Q
    ||||||||||||||||||||||||  |||| | ||||||||||| || ||||  |||| || |||||||| ||||    
T  39138467 atcacataattcagtgtaattatatatgtcggtgtcggacacgatacatgtctaacacggggacacgccttatcc 39138541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 3294300 - 3294263
Alignment:
Q  41 acgacacgtgtccgacaccggaacacgcctaatccgaa 78  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  3294300 acgacacgtgtccaacaccgggacacgcctaatccgaa 3294263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 6490786 - 6490835
Alignment:
Q  48 gtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||| |||||| ||||||||  | ||||||||||||||||    
T  6490786 gtgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcatag 6490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 12278861 - 12278932
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggaca-cgacacgtgtccgacaccggaacacgcctaatcc 75  Q
    ||||||||||||||||||||| ||||| | |||||||| | || |||||| |||||||| |||| ||||||||    
T  12278861 acataattcagtgtaattatatgtgtc-gtgtcggacaccaacgcgtgtctgacaccgggacacacctaatcc 12278932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 14729770 - 14729822
Alignment:
Q  45 cacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||||||| |||||| ||||||||  | ||||||| ||||||||    
T  14729770 cacgtgtccgacaccgggacacgcttaatccgaggagtgtccgtacttcatag 14729822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 23751928 - 23752018
Alignment:
Q  6 ataattcagtgtaattataagtgtcagagtcggacac-gacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||| |||||||| ||| ||||| | ||||||||| ||| |||||| ||||| ||| |||||||||||||| || |||| |||||||||||    
T  23751928 ataatttagtgtaatcataggtgtc-gtgtcggacaccgacgcgtgtcagacacggga-cacgcctaatccgataagtgtctgtgcttcatag 23752018  T

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Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 27093449 - 27093373
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    ||||||||||| |||||||||||| | ||| | ||  ||||||||| |||||||||||  | |||| ||||||||||    
T  27093449 atcacataatttagtgtaattatatgcgtcggtgttagacacgacatgtgtccgacactaggacacacctaatccga 27093373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 27184852 - 27184928
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    ||||||||||| |||||||||||| | ||| | ||  ||||||||| |||||||||||  | |||| ||||||||||    
T  27184852 atcacataatttagtgtaattatatgcgtcggtgttagacacgacatgtgtccgacactaggacacacctaatccga 27184928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 41020519 - 41020607
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtg 89  Q
    ||||||||||| |||||||||||| | ||| | || | ||||||||| | ||  ||||||| ||||| ||||||| || ||||||||||    
T  41020519 atcacataatttagtgtaattatatgcgtcggtgttgaacacgacacatatctaacaccgggacacgtctaatccaaagaatgtccgtg 41020607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 28152121 - 28152217
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||| ||| |||||||||||  | ||| ||||||||||||    
T  28152121 atcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 34595157 - 34595253
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||||||||| ||||||| | ||||||||||||||||||| |||||||| |||| ||||||||||  | ||||||||||||||||    
T  34595157 atcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 28715321 - 28715416
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    ||||||||||||||||||| ||||||| | |||||||||||||||||| ||||||||| ||||||||||| ||| || ||| ||||||||||||||    
T  28715321 acataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcataggt 28715416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 16766764 - 16766827
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  16766764 gtcggacacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 4877967 - 4878063
Alignment:
Q  2 tcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    |||||||||| ||| |||||| ||||||| | |||||||||||||| |||||||||| || |||||||||||||||  | ||||||||||||||||||    
T  4877967 tcacataattaagtataattacaagtgtcggtgtcggacacgacacatgtccgacacagg-acacgcctaatccgaggagtgtccgtgcttcataggt 4878063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 7378002 - 7378098
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||| |||||||||| ||||| | ||||||||||||| |  ||||||||||| ||||| |||||| || || ||||||||||||||||    
T  7378002 atcacataattcaatgtaattatatgtgtcggtgtcggacacgacatgcatccgacaccgggacacggctaatctgagaagtgtccgtgcttcatag 7378098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 17841625 - 17841530
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    ||||||||||| |||||||||| ||||| | | ||||||||||||| ||||||||||| |  |||||||||||||||  | |||||||||||||||    
T  17841625 atcacataatttagtgtaattacaagtgacggtgtcggacacgacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 32978933 - 32978842
Alignment:
Q  3 cacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttca 94  Q
    ||||||||| |||||||||| ||||||| | |||||||||||||| ||||||||||||| ||||| ||||||| |  | |||||||||||||    
T  32978933 cacataattaagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 6898314 - 6898220
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    |||||||| |||||||||| ||||||| | |||||||||||  ||||||| |||||| ||||||||||||||||  | ||| |||||||||||||    
T  6898314 acataattaagtgtaattacaagtgtcggtgtcggacacgaagcgtgtccaacaccgaaacacgcctaatccgatgagtgttcgtgcttcatagg 6898220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 7265629 - 7265535
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    |||||||||||||||||||||||| ||||| | ||||||||| | || ||||||||||||||| | |||||||||||  |  |||||||||||||    
T  7265629 atcacataattcagtgtaattatatgtgtcggtgtcggacacaatacatgtccgacaccggaatatgcctaatccgaggagcgtccgtgcttcat 7265535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 33001325 - 33001227
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    ||||||||||| | |||||||||| ||||| | ||||||||||||||||||| ||||||| || ||||||||||| || | |||  |||||||||||||    
T  33001325 atcacataattaaatgtaattatatgtgtcggtgtcggacacgacacgtgtctgacaccgaaatacgcctaatccaaagagtgtttgtgcttcataggt 33001227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 29020939 - 29021036
Alignment:
Q  5 cataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccga-aaaatgtccgtgcttcataggttt 101  Q
    |||||||||||||||||||| ||||  | |||||||||||||||||| ||||||||   ||||||||||||||  || ||||| ||||||||||||||    
T  29020939 cataattcagtgtaattataggtgtttgtgtcggacacgacacgtgttcgacaccgaggcacgcctaatccgattaagtgtccatgcttcataggttt 29021036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 9658902 - 9658974
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaat 73  Q
    ||||||||||||||||||||||||  |||| | ||  ||||||||||||||| ||||||||||||||||||||    
T  9658902 atcacataattcagtgtaattatatttgtcggtgttagacacgacacgtgtctgacaccggaacacgcctaat 9658974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 24645504 - 24645600
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||||| || ||| ||||||| | ||| ||||||||||||||||||||||   ||||| |||||||||| | |||| |||||||||||    
T  24645504 atcacataattcagtatagttacaagtgtcggtgtcagacacgacacgtgtccgacaccaagacacgtctaatccgaagagtgtctgtgcttcatag 24645600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 32511702 - 32511606
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||||||||||||||||  | |||||| ||||||  |||| |||| |||| ||||||||||| ||  | ||||||||||||||||    
T  32511702 atcacataattcagtgtaattataagtgttggtgtcggatacgacatatgtctgacatcggagcacgcctaatcggaggagtgtccgtgcttcatag 32511606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 17327691 - 17327588
Alignment:
Q  1 atcacataattcagtgtaattataagtgtca-----gagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    ||||||||||| ||||||| |||| ||||||     | ||||||||||||||||||| ||||| || |||||||||||||||  | ||||||||||||||    
T  17327691 atcacataatttagtgtaactatatgtgtcagtgtcgtgtcggacacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcat 17327592  T
Q  96 aggt 99  Q
    ||||    
T  17327591 aggt 17327588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 8365510 - 8365445
Alignment:
Q  35 tcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    |||||||||||||||||||||||| || |||||||||||||||  | | |||||||||||||||||    
T  8365510 tcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcataggtt 8365445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 8777009 - 8776905
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacga-----cacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    |||||| ||||||||||||||| ||||||  | |||||||||||     ||||||||||||||||  |||| ||||||||||  | ||||||||||||||    
T  8777009 atcacaaaattcagtgtaattacaagtgttggtgtcggacacgacacgacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcat 8776910  T
Q  96 aggtt 100  Q
    |||||    
T  8776909 aggtt 8776905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 13360408 - 13360313
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||||||||||| || || | ||| ||||| |||  |||||||||| |  |||||||||||||||| | ||||||||||||||||    
T  13360408 atcacataattcagtgtaattatatgtttcggtgtcagacacaacaa-tgtccgacactgagacacgcctaatccgaagagtgtccgtgcttcatag 13360313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 12627613 - 12627522
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgctt 92  Q
    |||||||||||||||||||| ||| |||||   ||||||||| |||| ||||||||||||  |||| |||||||||| |||| || ||||||    
T  12627613 atcacataattcagtgtaataatatgtgtcgatgtcggacaccacacatgtccgacaccgagacactcctaatccgagaaatatcagtgctt 12627522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 7977863 - 7977793
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatc 74  Q
    ||||||||||||||||||| ||||||| | ||||||||| |||  ||||||||| || |||||||||||||    
T  7977863 acataattcagtgtaattacaagtgtcggtgtcggacacaacatatgtccgacaacgaaacacgcctaatc 7977793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 31384943 - 31385048
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcg----------gacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgc 90  Q
    |||||||||||||||||||||| ||||||||| ||||          |||||||||||||||| ||||||| ||||||||||||| |  | |||||||||    
T  31384943 atcacataattcagtgtaattacaagtgtcagtgtcgtgtagtgttggacacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgc 31385042  T
Q  91 ttcata 96  Q
    ||||||    
T  31385043 ttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 10339117 - 10339052
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    |||||||||||||| |||||||||| || |||||||||||| ||  | ||||||||||||||||||    
T  10339117 gtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataggt 10339052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 9025495 - 9025448
Alignment:
Q  47 cgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttca 94  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||||    
T  9025495 cgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 12868664 - 12868613
Alignment:
Q  49 tgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    |||||||||| |||||||||||||||||| || |||| ||||||||||||||    
T  12868664 tgtccgacacgggaacacgcctaatccgataagtgtcggtgcttcataggtt 12868613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 17302628 - 17302687
Alignment:
Q  38 gacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||| |||||||||||||| |||||||| |||||||| || |||||||||| |||||||    
T  17302628 gacacaacacgtgtccgacatcggaacacacctaatccaaagaatgtccgtgtttcatag 17302687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 17435266 - 17435329
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||||| |||||| || ||||| |||||| ||||| ||||||| ||||||||    
T  17435266 gtcggacacgacacgtgttcgacactgggacacgtctaatctgaaaagtgtccgtacttcatag 17435329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3398641 - 3398719
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcg-----gacacgacacgtgtccgacaccggaacacgcctaatc 74  Q
    |||| |||||||||||||||||||||| || | ||||     |||||||||| ||||||||||||||||||| ||||||    
T  3398641 atcatataattcagtgtaattataagtatcggtgtcgtgttggacacgacacatgtccgacaccggaacacgtctaatc 3398719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 7740664 - 7740762
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    |||||| |||| |||||||||||| ||||||| ||||||||||||||||  |||| ||| | ||||||||   | || || |||||||| |||||||||    
T  7740664 atcacaaaattgagtgtaattatatgtgtcagtgtcggacacgacacgtacccgataccaggacacgcctgccctgagaagtgtccgtgtttcataggt 7740762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19040375 - 19040421
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacac 47  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||||    
T  19040375 atcacataattcagtgtaattatatgtgtctgtgtcggacacgacac 19040421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 16833331 - 16833428
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    |||||||| ||||||||||||| ||||||| | ||  ||||||||||| |||||||||| | |||| || |||||||  | |||| || |||||||||    
T  16833331 atcacatacttcagtgtaattacaagtgtcggtgttagacacgacacgcgtccgacaccaggacacaccgaatccgaggagtgtctgtacttcatagg 16833428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 12696350 - 12696426
Alignment:
Q  4 acataattcagtgtaattataagtgtca-----gagtcggacacgacacgtgtccgacaccggaacacgcctaatcc 75  Q
    ||||||||||||||||||| ||||||||     | ||||||||||||||||||| |||||||| |||| ||| ||||    
T  12696350 acataattcagtgtaattacaagtgtcagtgtcgtgtcggacacgacacgtgtctgacaccgggacacaccttatcc 12696426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17341700 - 17341668
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcaga 33  Q
    |||||||||||||||||||||||||||||||||    
T  17341700 atcacataattcagtgtaattataagtgtcaga 17341668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 3209447 - 3209518
Alignment:
Q  26 gtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||| |||| |||||||||| |||||||||| | |||||||||||||||  | |||  |||||||||||    
T  3209447 gtgtcagtgtcgaacacgacacgcgtccgacacccggacacgcctaatccgaggagtgtttgtgcttcatag 3209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 12235552 - 12235462
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacac-gacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttca 94  Q
    ||||||||||||||||| ||| ||||| | ||| ||||| |||  ||||||| |||||| |||| |||||||| |||| |||||||||||||    
T  12235552 acataattcagtgtaatcataggtgtc-gtgtccgacaccgacgtgtgtccggcaccgggacacccctaatccaaaaagtgtccgtgcttca 12235462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 853895 - 853821
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatcc 75  Q
    ||||||||||| |||| ||||| ||||||| | |||||| |||||| ||||||||||  |  |||||||||||||    
T  853895 atcacataattaagtgcaattacaagtgtcggtgtcggatacgacatgtgtccgacatagagacacgcctaatcc 853821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 1191735 - 1191642
Alignment:
Q  2 tcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    ||||| ||||||||||||||| |||||||   || ||||||||| |||||||||||||   |||| ||||||||||  |  ||| ||||||||||||    
T  1191735 tcacaaaattcagtgtaattacaagtgtcgatgttggacacgacgcgtgtccgacacc---acacacctaatccgaggaccgtctgtgcttcatagg 1191642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 1315969 - 1316031
Alignment:
Q  15 tgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    |||||||| ||||||| | ||||| |||| || |||||||||||| |||||||||||| ||||    
T  1315969 tgtaattacaagtgtcggtgtcgggcacgtcatgtgtccgacaccagaacacgcctaacccga 1316031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 13364741 - 13364643
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    |||| ||||||||||||||| ||| ||||| | || |||||||| || |||| |||||| | ||||| ||| |||||  | |||| |||||||||||||    
T  13364741 atcatataattcagtgtaatcatatgtgtcggtgttggacacgatacatgtctgacaccaggacacgtctattccgacgagtgtctgtgcttcataggt 13364643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 31959214 - 31959268
Alignment:
Q  42 cgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    ||||| |||||||||||||| |||| ||||||||||  | |||||||||||||||    
T  31959214 cgacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1700375 - 1700416
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacac 42  Q
    |||||||| ||||||||||||||||||||| | |||||||||    
T  1700375 atcacatatttcagtgtaattataagtgtcggtgtcggacac 1700416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31579261 - 31579211
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtcc 53  Q
    |||||||||||||||||||||||  ||||| | |||||||||||||| |||||    
T  31579261 atcacataattcagtgtaattat--gtgtcggtgtcggacacgacacatgtcc 31579211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 7248428 - 7248488
Alignment:
Q  37 ggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||| ||| |||||||||||||| ||||| | |||||||  | ||||||||||||||||    
T  7248428 ggacacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcatag 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 10827547 - 10827507
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatc 74  Q
    ||||||||| |||||||||||||| ||||| ||||||||||    
T  10827547 gtcggacacaacacgtgtccgacatcggaatacgcctaatc 10827507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 12690442 - 12690534
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    |||||||||| |||||||||| |||||   ||||||||| ||| |||||  ||| | ||||||||||||| | | ||||||| ||| ||||||    
T  12690442 acataattcaatgtaattatatgtgtcgatgtcggacactacatgtgtctaacatcagaacacgcctaattcaagaaatgtctgtgtttcata 12690534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 23771610 - 23771658
Alignment:
Q  10 ttcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacac 58  Q
    ||||||||||||| || |||| | ||||||||||||| |||||||||||    
T  23771610 ttcagtgtaattacaaatgtcggtgtcggacacgacatgtgtccgacac 23771658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 30851630 - 30851674
Alignment:
Q  8 aattcagtgtaattataagtgtcagagtcggacacgacacgtgtc 52  Q
    |||||| |||||||||| ||||| | |||||||||||||||||||    
T  30851630 aattcaatgtaattatatgtgtcggtgtcggacacgacacgtgtc 30851674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 32298643 - 32298571
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaat 73  Q
    ||||||||||| |||||||||||| ||||  | ||| |||| ||||  ||||| ||||| |||||||||||||    
T  32298643 atcacataatttagtgtaattatatgtgttggtgtcagacatgacatatgtccaacaccagaacacgcctaat 32298571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 37598861 - 37598951
Alignment:
Q  8 aattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||  || |||||||||||||||  | |||||||||||||||||    
T  37598861 aattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatagg 37598951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 18337352 - 18337448
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||||| || ||| |||| ||||||  | ||||||||||||||||    
T  18337352 atcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcatag 18337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 22515923 - 22515827
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||| |||||||||| ||||||| | |||||||||||||| | ||||||||||  |||||||||||||||  | ||||||||||||||||    
T  22515923 atcacataatttagtgtaattacaagtgtcggtgtcggacacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 1486745 - 1486646
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcg-----gacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    |||||||||||||||||||||||||||||| | ||||     |||||||||||||||||||||||| |||||||||||||||  | |||| |||||||||    
T  1486745 atcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 40258969 - 40258874
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    |||||||||||||||||||||| ||||||| | ||| |||||||||| ||||||||||| | |||||||||||||||  | ||||| |||||||||    
T  40258969 atcacataattcagtgtaattacaagtgtcggtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 51410048 - 51410147
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    |||||||||||||||||||||| ||||||| | |||||||||||||||| ||||||||||  ||||||||||||| |  | | | |||||||||||||||    
T  51410048 atcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcataggtt 51410147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 5898302 - 5898204
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    |||||||||||||||||||||||| | ||| | ||| |||||||||||||||| ||||||| ||||| |||||||||  | ||||||||||| ||||||    
T  5898302 atcacataattcagtgtaattatatgcgtcggtgtcagacacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctttataggt 5898204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 42359485 - 42359391
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    |||||| ||||||||||||||| ||||||| | |||||||| |||  |||||||||||||| |||||||||||||||  | ||||||||||||||    
T  42359485 atcacaaaattcagtgtaattacaagtgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1815280 - 1815353
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatc 74  Q
    |||||||||||||||||||||| ||||||| | ||| |||||||||| ||||||||||||| ||||||||||||    
T  1815280 atcacataattcagtgtaattacaagtgtcggtgtccgacacgacacatgtccgacaccgggacacgcctaatc 1815353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 40181894 - 40181970
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    |||||||||||||||||||||||| || || | ||||||||| |||||||||| ||||||| |||||||||||||||    
T  40181894 atcacataattcagtgtaattatatgtatcggtgtcggacacaacacgtgtcctacaccgggacacgcctaatccga 40181970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 46348419 - 46348323
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||| |||||| |||||||||| ||||||| | |||||||||||||||||||||||||||  |||||||| ||||||    ||||||||||||||||    
T  46348419 atcatataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatag 46348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 40917819 - 40917881
Alignment:
Q  37 ggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    ||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||||    
T  40917819 ggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcataggt 40917881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 6427531 - 6427595
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    |||||||||||||||||||||||||||| |||||||||||| ||  | |||||||||||||||||    
T  6427531 gtcggacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatagg 6427595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 29163417 - 29163317
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    ||||||||||||| | |||||||| ||||| | ||||||||||||||||| | |||||||| ||||| |||||| || || ||| |||||||||| ||||    
T  29163417 atcacataattcaatttaattatatgtgtcggtgtcggacacgacacgtgcctgacaccgggacacggctaatcagagaagtgttcgtgcttcattggtt 29163318  T
Q  101 t 101  Q
    |    
T  29163317 t 29163317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 29144369 - 29144318
Alignment:
Q  48 gtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  29144369 gtgtccgacaccggaacacgcctaatccgaagagtgtccgtgcttcataggt 29144318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 9828115 - 9828176
Alignment:
Q  38 gacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    |||||||||||||||||||||||| ||||| |||||||||  | ||||||||||||||||||    
T  9828115 gacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcataggt 9828176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 18190141 - 18190068
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    ||||||||||||||||||| |||||||   ||| ||||| |||||||||||||||||| |||| ||||||||||    
T  18190141 acataattcagtgtaattacaagtgtcgatgtcagacacaacacgtgtccgacaccgggacacacctaatccga 18190068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 9690303 - 9690211
Alignment:
Q  8 aattcagtgtaattataagtgtcagagtcggacac-gacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    ||||||||||||| ||| ||||| | ||||| ||| ||||||||||||||||||| |||||||||||||| | | |||  |||||||||||||    
T  9690303 aattcagtgtaatcatatgtgtcggcgtcggccactgacacgtgtccgacaccgggacacgcctaatccggagagtgtttgtgcttcataggt 9690211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 38078697 - 38078621
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    ||||||||||||| |||||||| ||||||| | |||||||||||||| ||| | ||||| | |||||||||||||||    
T  38078697 atcacataattcaatgtaattacaagtgtcggtgtcggacacgacacatgttcaacaccaggacacgcctaatccga 38078621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 32461456 - 32461393
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||||||||| ||||| || ||||||||||||| | || ||||||||||||||||    
T  32461456 gtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcatag 32461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 52903272 - 52903365
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||| ||||||||||||||||||| ||||| | ||||||||||    |||||||||||||| ||||| || || |||| | ||||||||||||||||    
T  52903272 atcatataattcagtgtaattatatgtgtcggtgtcggacacg---tgtgtccgacaccgggacacggcttattcgaagagtgtccgtgcttcatag 52903365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 43492530 - 43492453
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaa 78  Q
    ||||| |||||| ||||||||||  ||||| | ||| ||||| |||| ||||||||||||| ||||||||||||||||    
T  43492530 atcacgtaattcggtgtaattatgtgtgtcggtgtcagacacaacacatgtccgacaccggcacacgcctaatccgaa 43492453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 18471323 - 18471418
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    ||||||||||||||| |||||| ||||||| |      |||||||||||||||||||||| ||||| |||||| |||  | ||||||| |||||||||||    
T  18471323 atcacataattcagtataattacaagtgtcggt-----acacgacacgtgtccgacaccgaaacacacctaattcgaggagtgtccgtacttcataggtt 18471417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 5927376 - 5927281
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    |||| |||||| | |||||||| ||||||||| |||||||| ||||  ||||||||| || |||| |||||||| ||  | |||||||||||||||    
T  5927376 atcatataatttaatgtaattacaagtgtcagtgtcggacatgacaaatgtccgacatcgaaacatgcctaatctgaggagtgtccgtgcttcata 5927281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 10577771 - 10577676
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    |||||| ||| ||||||||||||| ||||| | | |||||||||| |||||| ||||| || |||||||| |||| |  | |||||||||||||||    
T  10577771 atcacaaaatgcagtgtaattatatgtgtcgggggcggacacgacgcgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 10577676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 12918968 - 12919063
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    ||||||||||||| ||| |||||| ||||  |  |||||||||||||||||| ||||| || ||||| || |||||| || ||| |||||||||||    
T  12918968 atcacataattcaatgtgattatatgtgttggtatcggacacgacacgtgtctgacacggggacacggcttatccgagaagtgttcgtgcttcata 12919063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 18556440 - 18556385
Alignment:
Q  42 cgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||| |||||||| || ||||||||||||||| || ||||||||||||||||    
T  18556440 cgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 18556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 26830611 - 26830701
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgctt 92  Q
    ||||||||||| | |||||||||||||||| | ||| ||||| |||||||| ||| ||||| |||||||||||| ||  | |||||||||||    
T  26830611 atcacataattaaatgtaattataagtgtc-gtgtcagacactacacgtgttcgataccgggacacgcctaatcagaggagtgtccgtgctt 26830701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 31015066 - 31015134
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatcc 75  Q
    |||||||||||||||||||||| |||||||      |||||||||||||||| |||| ||| |||||||||||||    
T  31015066 atcacataattcagtgtaattacaagtgtc------ggacacgacacgtgtctgacatcgggacacgcctaatcc 31015134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 46940798 - 46940747
Alignment:
Q  47 cgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    |||||||||||||||||||||||||||||||  | ||| |||||||||||||    
T  46940798 cgtgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcatagg 46940747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 47989564 - 47989627
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||| |||| |||| ||| |||||||||||||||  | ||||||||||||||||    
T  47989564 gtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2896157 - 2896059
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    ||||||||||||||||||  ||||  |||| | ||| ||||||||| |||||||| ||||| |||| |||||||| | || ||||| || |||||||||    
T  2896157 atcacataattcagtgtagctatatatgtcggtgtcagacacgacatgtgtccgagaccgggacacacctaatccaagaagtgtccatgtttcataggt 2896059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 16297284 - 16297223
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    ||||||||||||  |||||||||||| | |||||||||||||||  | ||||||||||||||    
T  16297284 gtcggacacgacgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 17778617 - 17778670
Alignment:
Q  42 cgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    |||||||||||||||||||| ||| ||||||||||| || ||| ||||||||||    
T  17778617 cgacacgtgtccgacaccgggacatgcctaatccgagaagtgttcgtgcttcat 17778670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 25361953 - 25362012
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||  ||||||||||||||||||  |||||||||| | ||||||||||||||||    
T  25361953 gtcggacacgaca--tgtccgacaccggaacac--ctaatccgaagagtgtccgtgcttcatag 25362012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 34741906 - 34741966
Alignment:
Q  38 gacacgaca-cgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    ||||||||| |||||||||||| ||| ||||||||||||||| | |||||||||||||||||    
T  34741906 gacacgacaacgtgtccgacacggga-cacgcctaatccgaagagtgtccgtgcttcatagg 34741966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 36878484 - 36878585
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacacc-----ggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    |||||||||||||||||||||||| ||||| | ||| ||||||| || ||||||||||      || ||||||||||||| |  | ||||||||||||||    
T  36878484 atcacataattcagtgtaattataggtgtcggtgtctgacacgaaacatgtccgacacgacacggggacacgcctaatcccaggagtgtccgtgcttcat 36878583  T
Q  96 ag 97  Q
    ||    
T  36878584 ag 36878585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 6427594 - 6427634
Alignment:
Q  37 ggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  6427594 ggacacgacacgtgtccgataccgggacacgcctaatccga 6427634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 15765828 - 15765880
Alignment:
Q  48 gtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    ||||| ||||| || |||||||||||||||| | |||||||||||||||||||    
T  15765828 gtgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcataggtt 15765880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 31694702 - 31694638
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    ||||||||| |||| | | |||||||||||||||||||||| ||  | |||||||||||||||||    
T  31694702 gtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtccgtgcttcatagg 31694638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22881652 - 22881606
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacac 47  Q
    ||||||||||| |||||||||| ||||||| | ||||||||||||||    
T  22881652 atcacataatttagtgtaattacaagtgtcggtgtcggacacgacac 22881606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 27966027 - 27965940
Alignment:
Q  8 aattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||||  |||| | ||| |||||| | |||| | |||||||| |||||||||||||||  | ||||| ||||||||||    
T  27966027 aattcagtgtaattata--tgtccgtgtcagacacgcctcgtgcctgacaccgggacacgcctaatccgaggagtgtccatgcttcatag 27965940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30749863 - 30749913
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgt 51  Q
    |||||||||||||||||||||||| ||||| | ||||||||| ||| ||||    
T  30749863 atcacataattcagtgtaattatatgtgtcggtgtcggacaccacatgtgt 30749913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30771314 - 30771364
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgt 51  Q
    |||||||||||||||||||||||| ||||| | ||||||||| ||| ||||    
T  30771314 atcacataattcagtgtaattatatgtgtcggtgtcggacaccacatgtgt 30771364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 39130798 - 39130704
Alignment:
Q  6 ataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    |||||| |||||||||||| ||||| | ||||||||| |||||||  |||||  || |||||| |||||| || | ||||| |||||| ||||||    
T  39130798 ataatttagtgtaattatatgtgtcggtgtcggacacaacacgtgctcgacattgggacacgcttaatccaaagagtgtccatgcttcgtaggtt 39130704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 5944306 - 5944335
Alignment:
Q  1 atcacataattcagtgtaattataagtgtc 30  Q
    ||||||||||||||||||||||||||||||    
T  5944306 atcacataattcagtgtaattataagtgtc 5944335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 5944352 - 5944413
Alignment:
Q  36 cggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||| |||| ||||||||||||| | |||||||||||||  | ||| ||||||||||||    
T  5944352 cggacacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcatag 5944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 7918247 - 7918153
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcg-gacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    |||||||||||||||||||||||| ||||||| |||| | ||    |||| || |||||| | |||| ||||||||||  | |||||||||||||||||    
T  7918247 atcacataattcagtgtaattatatgtgtcagtgtcgtgtca----acgtttctgacaccaggacacacctaatccgaggagtgtccgtgcttcatagg 7918153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 17831534 - 17831485
Alignment:
Q  26 gtgtcagagtcggacac-gacacgtgtccgacaccggaacacgcctaatc 74  Q
    ||||||| ||||||||| |||| |||||||||||||| ||||||||||||    
T  17831534 gtgtcagtgtcggacaccgacatgtgtccgacaccgggacacgcctaatc 17831485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 21530728 - 21530769
Alignment:
Q  17 taattataagtgtcagagtcggacacgacacgtgtccgacac 58  Q
    |||||||||||||| | |||||||||||||| ||||||||||    
T  21530728 taattataagtgtcggtgtcggacacgacacatgtccgacac 21530769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 25934683 - 25934748
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    ||||||||||||||||||| ||||| || | |||||| |||| |  | ||||||||||||||||||    
T  25934683 gtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcataggt 25934748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 35919312 - 35919283
Alignment:
Q  1 atcacataattcagtgtaattataagtgtc 30  Q
    ||||||||||||||||||||||||||||||    
T  35919312 atcacataattcagtgtaattataagtgtc 35919283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 21366038 - 21365990
Alignment:
Q  51 tccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    ||||||||||  |||||||||||||||  | ||||||||||||||||||    
T  21366038 tccgacaccgagacacgcctaatccgaggagtgtccgtgcttcataggt 21365990  T

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Target: scaffold0652 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 498 - 403
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    |||||| ||||||||||||||| ||||||| | |||||||||||| ||||||||||||||| |||| ||||||||||  | |||||||||||||||    
T  498 atcacaaaattcagtgtaattacaagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

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Target: scaffold0050 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 70304 - 70394
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttca 94  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||| | ||| |||||||||||  | ||| |||||||||    
T  70304 acataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttca 70394  T

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Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3025574 - 3025668
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||| |  ||||| |||||||||  | ||||||||||||||    
T  3025574 atcacataattcagtgtaattataggtgtcagtgtcggacacgacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttcat 3025668  T

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Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 24413592 - 24413499
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||| ||||||||||||||||| |||||||||||  ||||||| ||| ||| ||||| ||||||||| || ||||||||||||||||    
T  24413592 acataattcagggtaattataagtgtcagtgtcggacacgatgcgtgtccaacagcgggacacgtctaatccgagaagtgtccgtgcttcatag 24413499  T

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Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 40332214 - 40332312
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    |||||||||||||||||||||| ||||||| | || ||||||||||||||||| ||||||| || ||||||||||||  | |||||||| |||| ||||    
T  40332214 atcacataattcagtgtaattacaagtgtcggtgtgggacacgacacgtgtcccacaccgggacgcgcctaatccgaggagtgtccgtgtttcacaggt 40332312  T

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Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 36450790 - 36450694
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||| ||||||||||||||| ||||||  | |||||||||||| ||||||||||||| | |||||||||||||||  | |||| |||||||||||    
T  36450790 atcacagaattcagtgtaattacaagtgtaggtgtcggacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

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Target: chr8; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 5813616 - 5813714
Alignment:
Q  2 tcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    ||||||| || ||||||| || ||||||| | |||||||||||||||||||||||||||| |||||||||||  ||  | |||||||||||| ||||||    
T  5813616 tcacatattttagtgtaaatacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttcgtaggtt 5813714  T

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Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 926815 - 926730
Alignment:
Q  10 ttcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||||||||| ||| || | ||||||  | ||||||||||||||    
T  926815 ttcagtgtaattataagtgtcggtgtcggacgcgacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcat 926730  T

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Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 8343387 - 8343447
Alignment:
Q  38 gacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    |||||||||||||||||||||||| |||||||||||||||| | |||| ||||||||||||    
T  8343387 gacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatagg 8343447  T

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Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 15816121 - 15816058
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||  ||||||||||| ||||||||||||||| || ||||||||||||||||    
T  15816121 gtcggacacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 15816058  T

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Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 29510305 - 29510230
Alignment:
Q  25 agtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    |||||| | |||||||||||| ||||||||||||||| |||| ||||||||||  | |||||||||||||||||||    
T  29510305 agtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcataggtt 29510230  T

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Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 18407742 - 18407840
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    |||||||||||||||||||||| |||||||   | |||||||||||| ||||||||||  | |||||||||||  ||  | ||||||||||||||||||    
T  18407742 atcacataattcagtgtaattacaagtgtcgctgccggacacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcataggt 18407840  T

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Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 20679431 - 20679337
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcat 95  Q
    |||||||| ||||||||||||||||||||| | ||| ||| | |||||||||||||||||| |||||||| | ||||  | ||||| ||||||||    
T  20679431 atcacatagttcagtgtaattataagtgtcggtgtcagacgcaacacgtgtccgacaccgggacacgccttaaccgaggagtgtccatgcttcat 20679337  T

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Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 31557019 - 31557093
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatcc 75  Q
    |||||||||||||||||||||| |||| || | ||| |||||||||| ||||||||||| | |||||||||||||    
T  31557019 atcacataattcagtgtaattacaagtttcggtgtcagacacgacacatgtccgacaccaggacacgcctaatcc 31557093  T

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Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 3951572 - 3951476
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||| ||| ||||||| ||||| ||||| | ||| ||||||||||||||| ||||| |||||||||||||||| |  | | ||||||||||||||    
T  3951572 atcacaaaatgcagtgtacttatatgtgtcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcatag 3951476  T

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Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 14134722 - 14134818
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||||||||||||||  |||| | |||  |||||||||||||||| |||| | ||||||||||| |||  | |||||||| |||||||    
T  14134722 atcacataattcagtgtaattatatatgtcggtgtcaaacacgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtttcatag 14134818  T

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Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 22652043 - 22652106
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||| |||||||||||||| ||||| |||||||||  | ||||||||||||||||    
T  22652043 gtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

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Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 126369 - 126307
Alignment:
Q  15 tgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    |||||||||| ||||||| |||||||||||||||||||| | ||||| ||||| |||||||||    
T  126369 tgtaattatatgtgtcagtgtcggacacgacacgtgtccaataccgggacacggctaatccga 126307  T

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Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 22197734 - 22197668
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    |||||||| |||||||||||||||||||| ||||||||||| ||  | ||||||||||| |||||||    
T  22197734 gtcggacatgacacgtgtccgacaccggatcacgcctaatctgaggagtgtccgtgctttataggtt 22197668  T

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Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 33405418 - 33405324
Alignment:
Q  3 cacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||| |||||||||||| ||||| | |||||||||||||| |||| |||||| | ||||| ||||||| |  | |||||||||| |||||    
T  33405418 cacataatttagtgtaattatatgtgtcggtgtcggacacgacacatgtctgacacctggacacggctaatccaatgagtgtccgtgctccatag 33405324  T

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Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 8342995 - 8343087
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    ||||||||||| |||||||||| ||||||| | |||| ||| |     ||||||||||||| |||||||||||||||| | |||| ||||||||||||    
T  8342995 atcacataatttagtgtaattacaagtgtcggtgtcgtacatg-----tgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatagg 8343087  T

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Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 22943349 - 22943309
Alignment:
Q  37 ggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  22943349 ggacacgacacgtgtccgacaccgggacacgcctaatccga 22943309  T

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Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 31580163 - 31580087
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    ||||||||||| |||||||||||| |||||   ||||||| |||||| ||| |||||||| ||||| ||||||||||    
T  31580163 atcacataattgagtgtaattataggtgtcgatgtcggacgcgacacatgttcgacaccgaaacacacctaatccga 31580087  T

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Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 39820457 - 39820547
Alignment:
Q  6 ataattcagtgtaattataagtgtcagagtcggacac-gacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||| |||||||| ||| ||||| | ||||||||| ||| |||||||||||| ||| |||||||||||||| || ||||||||||||||||    
T  39820457 ataatttagtgtaatcataggtgtc-gtgtcggacaccgacgcgtgtccgacacggga-cacgcctaatccgagaagtgtccgtgcttcatag 39820547  T

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Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 6065649 - 6065586
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||| |||||||||||||||||||| |||| | |  | ||||||||||||||||    
T  6065649 gtcggacacgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcatag 6065586  T

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Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 15023288 - 15023217
Alignment:
Q  6 ataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    ||||||||||||||||| |||||||   |||||| |||||||||||||||  | |||||||| |||||||||    
T  15023288 ataattcagtgtaattacaagtgtcgatgtcggatacgacacgtgtccgatgctggaacacgtctaatccga 15023217  T

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Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 20873092 - 20873151
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccg 60  Q
    ||||||||||| |||||||||| ||||||| | ||||||||||| |||||||||| ||||    
T  20873092 atcacataatttagtgtaattacaagtgtcggtgtcggacacgatacgtgtccgataccg 20873151  T

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Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 43737847 - 43737752
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    |||||| ||| ||||||||||||| ||||| | ||||||||||||| ||||| ||||| || | |||||| |||| |  | |||||||||||||||    
T  43737847 atcacaaaatacagtgtaattatatgtgtcggtgtcggacacgacaggtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 43737752  T

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Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 4673417 - 4673351
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    |||||||||||| | | ||||||||||||||||||||||||| |  | |||| ||||||||||||||    
T  4673417 gtcggacacgacgcatatccgacaccggaacacgcctaatccaaggagtgtctgtgcttcataggtt 4673351  T

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Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 9414911 - 9414857
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccga 55  Q
    |||||||||||||||| ||||||||||||  | ||| ||||||||||||||||||    
T  9414911 atcacataattcagtgcaattataagtgttggtgtcagacacgacacgtgtccga 9414857  T

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Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 38079022 - 38079112
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgct 91  Q
    ||||||| |||||||||||||||| | |||   |||||||||||| | |||||||||||||  ||||  ||||| ||||| ||||||||||    
T  38079022 atcacatgattcagtgtaattatatgcgtcgatgtcggacacgacgcatgtccgacaccgggccacgtataatctgaaaagtgtccgtgct 38079112  T

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Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4948675 - 4948718
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacga 44  Q
    |||||||||||||||||||||| ||||||| | |||||||||||    
T  4948675 atcacataattcagtgtaattacaagtgtcggtgtcggacacga 4948718  T

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Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 12570497 - 12570438
Alignment:
Q  38 gacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||| |||||||||||||||| | |||||||||||| ||| | ||||||||||| ||||    
T  12570497 gacactacacgtgtccgacaccaggacacgcctaatctgaagattgtccgtgctttatag 12570438  T

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Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 12570723 - 12570664
Alignment:
Q  38 gacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||| |||||||||||||||| | |||||||||||| ||| | ||||||||||| ||||    
T  12570723 gacactacacgtgtccgacaccaggacacgcctaatctgaagattgtccgtgctttatag 12570664  T

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Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 21465471 - 21465542
Alignment:
Q  26 gtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||| |||||||||||||||||||| |||| || | |||||||||  ||  | ||||||||||||||||    
T  21465471 gtgtcagtgtcggacacgacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgcttcatag 21465542  T

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Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 27213595 - 27213646
Alignment:
Q  48 gtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    ||||| |||||||| ||||| ||||||||| || ||||||||||||||||||    
T  27213595 gtgtcggacaccgggacacggctaatccgagaagtgtccgtgcttcataggt 27213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 34451024 - 34450961
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||||||||| ||||| || |||||||| |||| |  | ||||||||||||||||    
T  34451024 gtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 34450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 37283846 - 37283755
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||||||||||  ||||| | || ||||||||||||||||    ||||| ||||| |||||||||  | || |||||||||||||    
T  37283846 atcacataattcagtgtaattat--gtgtcggtgtgggacacgacacgtgtc---taccgggacacgtctaatccgaggagtgcccgtgcttcatag 37283755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 4122236 - 4122182
Alignment:
Q  39 acacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttc 93  Q
    |||||||||||||  |||||||||||||| ||||||| || | ||||||||||||    
T  4122236 acacgacacgtgttggacaccggaacacgtctaatccaaagagtgtccgtgcttc 4122182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4786374 - 4786324
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgt 51  Q
    |||||||||||||||||||||||| ||||| | |||||| |||||| ||||    
T  4786374 atcacataattcagtgtaattatatgtgtcggtgtcggatacgacatgtgt 4786324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 22596020 - 22596070
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccg 54  Q
    ||||||||||||||||||| ||||||  | ||||||| |||||||||||||    
T  22596020 acataattcagtgtaattacaagtgttggtgtcggacgcgacacgtgtccg 22596070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 29447102 - 29447040
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    ||||||||||||| ||||| |||||| | ||||||||||||| |  | |||||||||||||||    
T  29447102 gtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 41837729 - 41837667
Alignment:
Q  35 tcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||| || ||||||| | ||||||| |||||||||| | ||||||| ||||||||    
T  41837729 tcggacacgacatgtatccgacaacagaacacgtctaatccgaagagtgtccgttcttcatag 41837667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 949266 - 949198
Alignment:
Q  36 cggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtttagt 104  Q
    |||| ||||||| | ||||||||||  |||| ||||||| ||  ||||| |||||||||||||||||||    
T  949266 cggatacgacacatatccgacaccgagacactcctaatctgaggaatgttcgtgcttcataggtttagt 949198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 11803333 - 11803389
Alignment:
Q  41 acgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||| |||||||||| || ||||| |||||||||  | ||||||||||||||||    
T  11803333 acgacacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgcttcatag 11803389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 241661 - 241724
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||    
T  241661 gtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 45563 - 45470
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||||||||||| ||||||| | ||||||||||||||||||| |||||||  ||| ||||||||| || | ||| ||||||||||||    
T  45563 acataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgcgacatgcctaatccaaagattgtacgtgcttcatag 45470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 8833 - 8917
Alignment:
Q  13 agtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||  |||||||||||| ||  | | ||||||||||||||    
T  8833 agtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcatag 8917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 4919 - 4821
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtc--ggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||||||||||| ||||||  | |||  | ||||||||| |||||||||| || |||||||||||||||  | ||||||||||||||||    
T  4919 atcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 4821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14553 - 14623
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatc 74  Q
    |||||||||||||||||||||| |||||   | |||||||||||||||||||||||||||  ||||||||||||    
T  14553 atcacataattcagtgtaattacaagtg---gtgtcggacacgacacgtgtccgacaccgagacacgcctaatc 14623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 3338 - 3428
Alignment:
Q  8 aattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    |||| |||||||||| ||||||||| |||||||| ||||||||   ||||| || |||||||||||||||  | |||||||||||||||||    
T  3338 aattaagtgtaattacaagtgtcagtgtcggacaagacacgtggtggacactgggacacgcctaatccgaggagtgtccgtgcttcatagg 3428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 2999 - 3058
Alignment:
Q  38 gacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||||||| |||||||||||||||||||||||||  | |||||||||| |||||    
T  2999 gacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgctccatag 3058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 71792 - 71858
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggtt 100  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||  | |||| ||||||||||||||    
T  71792 gtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcataggtt 71858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 174586 - 174493
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||| ||||||| || |||| | || ||||||| || |||||||||| ||||||||||||||||| |  ||||| ||| ||||||||    
T  174586 acataattcagcgtaattacaaatgtcggtgttggacacgtcatgtgtccgacatcggaacacgcctaatccaaggaatgttcgtacttcatag 174493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 180099 - 180006
Alignment:
Q  4 acataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    ||||||||||| ||||||| || |||| | || ||||||| || |||||||||| ||||||||||||||||| |  ||||| ||| ||||||||    
T  180099 acataattcagcgtaattacaaatgtcggtgttggacacgtcatgtgtccgacatcggaacacgcctaatccaaggaatgttcgtacttcatag 180006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 5058 - 4976
Alignment:
Q  15 tgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||| ||||||| | ||||||||||||||||||||||||  |  ||| |||||||||||  | |||| |||||||||||    
T  5058 tgtaattacaagtgtcggtgtcggacacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcatag 4976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 8626 - 8564
Alignment:
Q  35 tcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatag 97  Q
    |||||||||| ||||||||||||| || ||||||||||| |||  | ||||||||||||||||    
T  8626 tcggacacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcatag 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 90866 - 90940
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcggacacgacacgtgtccgacaccggaacacgcctaatcc 75  Q
    |||| |||||||||||||||||||  ||||   ||| ||||| ||||||||||||||||  ||||||||||||||    
T  90866 atcatataattcagtgtaattatatatgtcgatgtcagacacaacacgtgtccgacaccaaaacacgcctaatcc 90940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 92878 - 92940
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    |||||||||||||| |||| |||||| | |||||||||||||||  | |||||||||||||||    
T  92878 gtcggacacgacacatgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcata 92940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19598 - 19679
Alignment:
Q  1 atcacataattcagtgtaattataagtgtca-----gagtcggacacgacacgtgtccgacaccggaacacgcctaatccga 77  Q
    |||||||||||||||||||||| |||||| |     | || |||||||||||||||||||||||| ||||| | ||||||||    
T  19598 atcacataattcagtgtaattacaagtgttatgtcggtgttggacacgacacgtgtccgacaccgaaacacacttaatccga 19679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 8662 - 8722
Alignment:
Q  39 acacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    |||||||||||||||||||| || | ||||||||||| |  | ||||||||||||||||||    
T  8662 acacgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcataggt 8722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 23534 - 23570
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcg 37  Q
    |||||||||||||||||||||||||||||||| ||||    
T  23534 atcacataattcagtgtaattataagtgtcagtgtcg 23570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 23443 - 23472
Alignment:
Q  1 atcacataattcagtgtaattataagtgtc 30  Q
    ||||||||||||||||||||||||||||||    
T  23443 atcacataattcagtgtaattataagtgtc 23472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 3841 - 3777
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcatagg 98  Q
    |||||||||||||| ||||||||| ||  |||||||||||||||  | ||||| |||||||||||    
T  3841 gtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcatagg 3777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 263406 - 263372
Alignment:
Q  3 cacataattcagtgtaattataagtgtcagagtcg 37  Q
    |||||||||||||||||||||||||||||| ||||    
T  263406 cacataattcagtgtaattataagtgtcagtgtcg 263372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 1683 - 1724
Alignment:
Q  17 taattataagtgtcagagtcggacacgacacgtgtccgacac 58  Q
    |||||||||||||| | |||||||||||||| ||||||||||    
T  1683 taattataagtgtcggtgtcggacacgacacatgtccgacac 1724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 51892 - 51941
Alignment:
Q  47 cgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcata 96  Q
    ||||||| ||||||| |||||||||||||||  ||||||| |||||||||    
T  51892 cgtgtccaacaccgggacacgcctaatccgaggaatgtccatgcttcata 51941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 53203 - 53232
Alignment:
Q  1 atcacataattcagtgtaattataagtgtc 30  Q
    ||||||||||||||||||||||||||||||    
T  53203 atcacataattcagtgtaattataagtgtc 53232  T

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Target: scaffold0044; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 53247 - 53303
Alignment:
Q  34 gtcggacacgacacgtgtccgacaccggaacacgcctaatccgaaaaatgtccgtgc 90  Q
    |||||||| ||||||||||||||||||| |||||  |||||| | || |||||||||    
T  53247 gtcggacatgacacgtgtccgacaccgggacacgtttaatccaagaagtgtccgtgc 53303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 20195 - 20231
Alignment:
Q  1 atcacataattcagtgtaattataagtgtcagagtcg 37  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  20195 atcacataattcagtgtaattacaagtgtcagtgtcg 20231  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 24091 - 24157
Alignment:
Q  34 gtcggacacgacacgtgt--ccgacaccggaacacgcctaatccgaaaaatgtccgtgcttcataggt 99  Q
    ||||||||| ||||||||  ||||||| ||| ||||||||||||||  | ||||||||||||||||||    
T  24091 gtcggacacaacacgtgtgtccgacactgga-cacgcctaatccgatgagtgtccgtgcttcataggt 24157  T

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