View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9267_low_44 (Length: 206)
Name: NF9267_low_44
Description: NF9267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9267_low_44 |
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Alignment Details
Target: chr8 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 41698061 - 41697885
Alignment:
| Q |
11 |
agattatacttattaatttcaagaaggaaattcttgcatttgttccgaaagaaggattgaaaagtttagaagatgattcctcaaacgagtgttctacagt |
110 |
Q |
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| T |
41698061 |
agattttacttattaatttcaagaaggaaattcttgcatttgttccgaaagaaggattgaaaagtttagaagatgattcctcaaatgagtgttctacagt |
41697962 |
T |
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| Q |
111 |
tcttgttgttgatgaatctatggcaattgcagcacacaatgaggatgcaaatgttgttcttgttggtcacacgtaag |
187 |
Q |
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| T |
41697961 |
tcttgttgttgatgaatctatggcaattgcagcacacaatgaggatgcaaatgttgttcttgttggtcacacgtaag |
41697885 |
T |
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