View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9271_low_21 (Length: 224)
Name: NF9271_low_21
Description: NF9271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9271_low_21 |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 17 - 208
Target Start/End: Original strand, 2422854 - 2423045
Alignment:
| Q |
17 |
tacagcttttgtgacatgccttgttgccttgcaataaaatactgatattgatgtgttacccaaaattgaaaataatttgatgccaacatgttacaaaaac |
116 |
Q |
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| T |
2422854 |
tacagcttttgtgacatgccttgttgccttgcaataaaatactgatattgatgtcttacccaaaattgaaaataatttgatgccaacatgttacaaaaac |
2422953 |
T |
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| Q |
117 |
aaatgctttctccatcactactactactttcacaaggaataatggctaactagtcatacttccaatcacacaccaaatcccctaacagcttt |
208 |
Q |
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| T |
2422954 |
aaatgctttctccatcactactactactttcacaaggaataatggctaactagtcatacttccaatcacacaccaaatcccctaacagcttt |
2423045 |
T |
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