View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9277_low_1 (Length: 725)

Name: NF9277_low_1
Description: NF9277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9277_low_1
NF9277_low_1
[»] chr7 (25 HSPs)
chr7 (37-707)||(38326624-38327297)
chr7 (424-486)||(27462428-27462490)
chr7 (423-486)||(19416520-19416583)
chr7 (423-478)||(10244733-10244788)
chr7 (423-486)||(16577852-16577915)
chr7 (423-486)||(16587747-16587810)
chr7 (427-486)||(19599155-19599214)
chr7 (423-486)||(40752831-40752894)
chr7 (423-480)||(18714454-18714511)
chr7 (411-464)||(21286344-21286397)
chr7 (423-471)||(44558781-44558829)
chr7 (423-486)||(21105609-21105672)
chr7 (423-486)||(31038514-31038577)
chr7 (427-486)||(41237916-41237975)
chr7 (409-468)||(41527552-41527611)
chr7 (423-486)||(46987092-46987155)
chr7 (423-486)||(47607902-47607965)
chr7 (423-485)||(5352335-5352397)
chr7 (412-486)||(5579688-5579762)
chr7 (427-485)||(19626518-19626576)
chr7 (424-486)||(27833393-27833455)
chr7 (423-485)||(46737791-46737853)
chr7 (412-461)||(3672569-3672618)
chr7 (423-468)||(8615029-8615074)
chr7 (423-484)||(43579047-43579108)
[»] chr4 (43 HSPs)
chr4 (423-486)||(56551584-56551647)
chr4 (423-485)||(47814244-47814306)
chr4 (423-486)||(2431003-2431066)
chr4 (423-482)||(10564461-10564520)
chr4 (423-486)||(11949755-11949818)
chr4 (419-486)||(22630352-22630419)
chr4 (427-486)||(43034334-43034393)
chr4 (412-486)||(28435240-28435314)
chr4 (423-488)||(42139850-42139915)
chr4 (423-479)||(20383494-20383550)
chr4 (423-486)||(3936633-3936696)
chr4 (423-486)||(7230286-7230349)
chr4 (423-486)||(9946433-9946496)
chr4 (423-486)||(16304090-16304153)
chr4 (412-486)||(6087742-6087816)
chr4 (423-479)||(675924-675980)
chr4 (423-483)||(16431622-16431682)
chr4 (430-486)||(49041973-49042029)
chr4 (423-486)||(836227-836290)
chr4 (412-486)||(2888868-2888943)
chr4 (423-486)||(5924655-5924718)
chr4 (423-486)||(11198334-11198397)
chr4 (423-486)||(19588160-19588223)
chr4 (412-471)||(19854560-19854619)
chr4 (427-486)||(19908702-19908761)
chr4 (423-478)||(20799394-20799449)
chr4 (423-486)||(23247590-23247653)
chr4 (423-486)||(23809955-23810018)
chr4 (423-486)||(24664983-24665046)
chr4 (427-486)||(24885792-24885851)
chr4 (427-486)||(32711790-32711849)
chr4 (423-486)||(35287499-35287562)
chr4 (423-486)||(43782297-43782360)
chr4 (423-466)||(51458684-51458727)
chr4 (423-486)||(54857607-54857670)
chr4 (423-486)||(10519141-10519208)
chr4 (412-486)||(19479469-19479543)
chr4 (412-478)||(22040645-22040711)
chr4 (423-464)||(2186347-2186388)
chr4 (423-484)||(14577501-14577562)
chr4 (412-465)||(34247435-34247488)
chr4 (427-480)||(40070966-40071019)
chr4 (423-464)||(52270044-52270085)
[»] chr2 (31 HSPs)
chr2 (423-486)||(22523004-22523067)
chr2 (423-484)||(7206131-7206192)
chr2 (423-486)||(35820293-35820356)
chr2 (427-486)||(27848167-27848227)
chr2 (412-480)||(29734686-29734754)
chr2 (423-486)||(10735823-10735886)
chr2 (423-486)||(22061293-22061356)
chr2 (423-486)||(24592838-24592901)
chr2 (423-486)||(25186234-25186297)
chr2 (423-486)||(29544633-29544696)
chr2 (427-486)||(34977214-34977273)
chr2 (423-486)||(44526134-44526197)
chr2 (423-485)||(8781643-8781705)
chr2 (412-486)||(41859847-41859921)
chr2 (423-484)||(41763872-41763933)
chr2 (423-463)||(9686463-9686503)
chr2 (423-479)||(20565074-20565130)
chr2 (423-479)||(43117189-43117245)
chr2 (427-486)||(2256981-2257040)
chr2 (423-486)||(20455897-20455960)
chr2 (423-486)||(30089055-30089118)
chr2 (423-486)||(30125659-30125722)
chr2 (427-486)||(31815879-31815938)
chr2 (423-486)||(42066718-42066781)
chr2 (423-486)||(44810711-44810774)
chr2 (423-485)||(19212964-19213026)
chr2 (423-465)||(25598575-25598617)
chr2 (424-486)||(41778936-41778998)
chr2 (423-484)||(4927443-4927504)
chr2 (425-486)||(11953954-11954014)
chr2 (440-485)||(42791318-42791363)
[»] scaffold0011 (2 HSPs)
scaffold0011 (412-486)||(7717-7791)
scaffold0011 (423-486)||(185269-185332)
[»] chr3 (35 HSPs)
chr3 (412-486)||(38130951-38131025)
chr3 (423-486)||(25340916-25340979)
chr3 (423-486)||(25441492-25441555)
chr3 (414-486)||(48849755-48849826)
chr3 (427-486)||(4601854-4601913)
chr3 (423-486)||(14827531-14827594)
chr3 (423-478)||(24428473-24428528)
chr3 (423-486)||(29631192-29631255)
chr3 (423-486)||(35863805-35863868)
chr3 (423-486)||(45431954-45432017)
chr3 (423-486)||(45885469-45885532)
chr3 (412-486)||(53996294-53996368)
chr3 (423-466)||(977953-977996)
chr3 (423-486)||(2662098-2662161)
chr3 (423-486)||(11358240-11358303)
chr3 (419-478)||(16663236-16663295)
chr3 (423-486)||(16792966-16793029)
chr3 (423-466)||(21914847-21914890)
chr3 (423-486)||(22722408-22722471)
chr3 (423-486)||(27185483-27185546)
chr3 (423-486)||(32843254-32843317)
chr3 (423-486)||(34899103-34899166)
chr3 (427-486)||(51882192-51882251)
chr3 (423-486)||(52119382-52119445)
chr3 (440-486)||(8075808-8075854)
chr3 (424-486)||(22799718-22799780)
chr3 (423-485)||(38034802-38034864)
chr3 (428-466)||(42398001-42398039)
chr3 (423-465)||(43345020-43345062)
chr3 (423-481)||(44579642-44579700)
chr3 (427-480)||(2186425-2186478)
chr3 (423-464)||(10498709-10498750)
chr3 (426-471)||(11969657-11969702)
chr3 (422-463)||(17507714-17507755)
chr3 (423-480)||(23147976-23148033)
[»] chr6 (25 HSPs)
chr6 (412-485)||(655742-655815)
chr6 (423-486)||(26400870-26400933)
chr6 (412-486)||(14296949-14297023)
chr6 (427-486)||(8569719-8569778)
chr6 (423-486)||(17151242-17151305)
chr6 (423-486)||(29740488-29740551)
chr6 (423-486)||(32053794-32053857)
chr6 (423-485)||(20744144-20744206)
chr6 (427-471)||(1918465-1918509)
chr6 (430-486)||(21598970-21599026)
chr6 (427-486)||(2726409-2726468)
chr6 (423-486)||(4455588-4455651)
chr6 (423-486)||(5040825-5040888)
chr6 (423-478)||(7081654-7081709)
chr6 (423-478)||(8637437-8637492)
chr6 (423-486)||(13376318-13376381)
chr6 (423-466)||(18254113-18254156)
chr6 (423-486)||(21847200-21847263)
chr6 (427-478)||(31971539-31971590)
chr6 (423-486)||(33824887-33824950)
chr6 (423-484)||(2473609-2473670)
chr6 (423-464)||(8810646-8810687)
chr6 (423-480)||(9392666-9392723)
chr6 (441-486)||(15187087-15187132)
chr6 (441-486)||(15473474-15473519)
[»] scaffold0180 (1 HSPs)
scaffold0180 (423-486)||(17738-17800)
[»] chr8 (28 HSPs)
chr8 (423-486)||(32051524-32051587)
chr8 (428-486)||(12800892-12800950)
chr8 (429-486)||(12748913-12748970)
chr8 (423-488)||(13286137-13286201)
chr8 (410-486)||(8717467-8717543)
chr8 (412-464)||(12910820-12910872)
chr8 (424-488)||(36781415-36781479)
chr8 (423-486)||(444419-444482)
chr8 (423-486)||(11708992-11709055)
chr8 (427-486)||(13357433-13357492)
chr8 (423-486)||(19163528-19163591)
chr8 (423-486)||(27587227-27587290)
chr8 (412-486)||(6235543-6235617)
chr8 (412-486)||(7996935-7997009)
chr8 (424-486)||(25136836-25136898)
chr8 (423-477)||(42208470-42208524)
chr8 (414-478)||(32421566-32421630)
chr8 (423-467)||(43962035-43962079)
chr8 (427-486)||(15001267-15001326)
chr8 (427-486)||(17898089-17898148)
chr8 (427-486)||(32944832-32944891)
chr8 (423-486)||(40679721-40679784)
chr8 (424-486)||(24838162-24838224)
chr8 (423-465)||(30427737-30427779)
chr8 (428-486)||(37141368-37141426)
chr8 (423-468)||(11771713-11771758)
chr8 (423-476)||(24195255-24195308)
chr8 (423-480)||(37938501-37938558)
[»] chr5 (28 HSPs)
chr5 (423-486)||(22522793-22522856)
chr5 (423-484)||(16133059-16133120)
chr5 (427-480)||(20721060-20721113)
chr5 (410-471)||(20927632-20927693)
chr5 (423-486)||(6489013-6489076)
chr5 (423-486)||(6624782-6624845)
chr5 (427-486)||(13864354-13864413)
chr5 (423-486)||(17090872-17090935)
chr5 (423-486)||(28207138-28207201)
chr5 (423-486)||(37932336-37932399)
chr5 (423-486)||(40715941-40716004)
chr5 (412-486)||(18331702-18331776)
chr5 (412-485)||(10704324-10704397)
chr5 (425-486)||(26655472-26655533)
chr5 (425-486)||(26927057-26927118)
chr5 (412-464)||(18489090-18489142)
chr5 (427-471)||(35109410-35109454)
chr5 (423-486)||(3445239-3445302)
chr5 (423-486)||(16036833-16036896)
chr5 (423-486)||(26409259-26409322)
chr5 (423-486)||(34436857-34436920)
chr5 (412-486)||(11720889-11720962)
chr5 (410-480)||(12189985-12190055)
chr5 (424-486)||(23036699-23036761)
chr5 (423-485)||(34191439-34191501)
chr5 (427-485)||(40837896-40837954)
chr5 (423-480)||(31602823-31602880)
chr5 (427-468)||(41650949-41650990)
[»] chr1 (27 HSPs)
chr1 (423-486)||(8269360-8269423)
chr1 (423-486)||(34521182-34521245)
chr1 (423-482)||(25532979-25533038)
chr1 (423-486)||(34632175-34632238)
chr1 (423-486)||(42045364-42045427)
chr1 (423-486)||(45139998-45140061)
chr1 (423-486)||(52441503-52441566)
chr1 (423-485)||(18166608-18166670)
chr1 (424-486)||(39302952-39303014)
chr1 (424-480)||(13615610-13615666)
chr1 (423-471)||(19620582-19620630)
chr1 (423-479)||(26803450-26803506)
chr1 (412-480)||(33153878-33153946)
chr1 (423-466)||(3509953-3509996)
chr1 (427-486)||(6000135-6000194)
chr1 (431-486)||(8736449-8736504)
chr1 (427-486)||(9265828-9265887)
chr1 (423-486)||(17139509-17139572)
chr1 (427-486)||(27172714-27172773)
chr1 (423-486)||(41884797-41884860)
chr1 (423-486)||(42888581-42888644)
chr1 (423-486)||(47528439-47528502)
chr1 (423-485)||(41763148-41763210)
chr1 (423-484)||(26755622-26755683)
chr1 (423-480)||(40680490-40680547)
chr1 (423-480)||(43611430-43611487)
chr1 (423-464)||(49183179-49183220)
[»] scaffold0735 (1 HSPs)
scaffold0735 (423-486)||(1534-1597)
[»] scaffold0118 (1 HSPs)
scaffold0118 (423-477)||(40004-40058)
[»] scaffold0021 (1 HSPs)
scaffold0021 (412-486)||(161136-161210)
[»] scaffold0983 (1 HSPs)
scaffold0983 (424-485)||(3308-3369)
[»] scaffold0896 (1 HSPs)
scaffold0896 (423-464)||(3147-3188)
[»] scaffold0122 (1 HSPs)
scaffold0122 (412-461)||(31172-31221)
[»] scaffold0040 (1 HSPs)
scaffold0040 (423-480)||(58859-58916)
[»] scaffold0026 (1 HSPs)
scaffold0026 (425-486)||(75333-75394)
[»] scaffold0005 (1 HSPs)
scaffold0005 (423-484)||(239813-239874)


Alignment Details
Target: chr7 (Bit Score: 539; Significance: 0; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 539; E-Value: 0
Query Start/End: Original strand, 37 - 707
Target Start/End: Complemental strand, 38327297 - 38326624
Alignment:
Q  37 tgtgtacggctattgactcgagtgtgaagttgtttgggtccacggaagagtgcaccacgagtctcttccttaatggcttcctcttccttatgattttgcc 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38327297 tgtgtacggctattgactcgagtgtgaagttgtttgggtccacggaagagtgcaccacgagtctcttccttaatggcttcctcttccttatgattttgcc 38327198  T
Q  137 catagatactgcaactacaaacatcaaaaacattgtttggctatgaagttattcgaacgaggacaattataatgaattagattagatttatgtttatggt 236  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38327197 catagatactgcaactacaaacatcaaacacattgtttggctatgaagttattcgaacaaggacaattataatgaattagattagatttatgtttatggt 38327098  T
Q  237 ccctaaaattttgccaatgttttattccctgtgatttgtttatccctctaaaacctgaaattacttgtttggtcttagtaaaatgaacaaattttgattt 336  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38327097 ccctaaaattttgccagtgttttattccctgtgatttgtttatccctctaaaacctgaaattacttgtttggtcttagtaaaatgaacaaattttgattt 38326998  T
Q  337 tgtccatacaaaaatctctcttgtttaaattcctttgaaatgtttcccttgtgtttaaaaatgtcctaatacttatccttgggagattagctcagttggt 436  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  38326997 tgtccatacaaaaatctctcttgtttaaattcctttgaaatgtttcccttgtgtttaaaaatgtcctaatatttatccttgtgagtttagctcagttggt 38326898  T
Q  437 attgacaatacataatacatgcaaggtccgaggttgaaaccccggccaccgc---nnnnnnnntgtcctaatattcgatttggttcaaattttannnnnn 533  Q
    || ||||| |||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||          
T  38326897 atggacaaaacataatacatgcaaggtccgaggttgaaaccccggccaccgcaaaaaaaaaaagttcctaatattcgatttggttcaaattttatttttt 38326798  T
Q  534 nncaacaacaatcttagttatttgatacaattcggcttaaaaactagttcgattcnnnnnnntacattccaatttttgtaaaggtaattttggttcagct 633  Q
      |||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||||||||||||||||||||||||||||||||||    
T  38326797 ttcaacaacaatcttagttatttgatacaattcggcttaaaaaccagttcgattcaaaaaaatacattccaatttttgtaaaggtaattttggttcagct 38326698  T
Q  634 tgaaactacataaccagtgcaccaaatctctcgcaattcggtttgtgacgaatcagtaacggcttggttctgtg 707  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38326697 tgaaactacataaccaatgcaccaaatctctcgcaattcagtttgtgacgaatcagtaacggcttggttctgtg 38326624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 424 - 486
Target Start/End: Complemental strand, 27462490 - 27462428
Alignment:
Q  424 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||||||| |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  27462490 tagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 27462428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 19416520 - 19416583
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||| | |||||||||||| |||| ||||||||||||||    
T  19416520 ttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccggccacc 19416583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 478
Target Start/End: Original strand, 10244733 - 10244788
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccc 478  Q
    |||||||||||||||| |||||| ||||||| |||||||||||| |||| ||||||    
T  10244733 ttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccc 10244788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 16577915 - 16577852
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||||||||||| |||||||||| | |||| ||||| ||||||||    
T  16577915 ttagctcagttggtagggacaatacataatatatgcaaggtctggggttcaaacctcggccacc 16577852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 16587747 - 16587810
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||||||||||| |||||||||| | |||| ||||| ||||||||    
T  16587747 ttagctcagttggtagggacaatacataatatatgcaaggtctggggttcaaacctcggccacc 16587810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 427 - 486
Target Start/End: Original strand, 19599155 - 19599214
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||| |||||| ||||||| |||||||||||| |||| |||||||| |||||    
T  19599155 ctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 19599214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 40752894 - 40752831
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||| |||| |||||||||||||| |||||| ||||| ||||  |||||||||||||    
T  40752894 ttagctcagttagtatggacaatacataatatatgcaatgtccggggttcgaaccccggccacc 40752831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 423 - 480
Target Start/End: Original strand, 18714454 - 18714511
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 480  Q
    |||||||||||||||  |||||| ||||||| |||||||||||| |||| ||||||||    
T  18714454 ttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcaaaccccg 18714511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 411 - 464
Target Start/End: Original strand, 21286344 - 21286397
Alignment:
Q  411 atccttgggagattagctcagttggtattgacaatacataatacatgcaaggtc 464  Q
    ||||||| ||| |||||||| ||||||| |||||||||||||| ||||||||||    
T  21286344 atccttgagagcttagctcaattggtatggacaatacataatatatgcaaggtc 21286397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 44558829 - 44558781
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 471  Q
    |||||||||||||||| |||||| ||||||| |||||||||| ||||||    
T  44558829 ttagctcagttggtatggacaatgcataatatatgcaaggtctgaggtt 44558781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 21105609 - 21105672
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| || ||| ||||||| ||||||||| |||||||  ||||||| |||||    
T  21105609 ttagctcagttggtatggaaaatgcataatatatgcaaggttcgaggttcgaaccccgaccacc 21105672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 31038577 - 31038514
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| |||| |  |||||||||| | |||| ||||||||||||||    
T  31038577 ttagctcagttggtatggacaatgcatattgtatgcaaggtctggggttcaaaccccggccacc 31038514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 486
Target Start/End: Complemental strand, 41237975 - 41237916
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||| |||||||| ||||| ||||||||| ||||||| ||||| || |||||    
T  41237975 ctcagttggtatggacaatacgtaatatatgcaaggttcgaggttcaaacctcgaccacc 41237916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 468
Target Start/End: Original strand, 41527552 - 41527611
Alignment:
Q  409 ttatccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgag 468  Q
    ||||||| | ||| |||||| ||||||||| |||||| ||||||| ||||||||||||||    
T  41527552 ttatcctcgtgagcttagcttagttggtatggacaatgcataatatatgcaaggtccgag 41527611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 46987092 - 46987155
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||| ||||||| |||||||||||| ||||  |||||||| ||||    
T  46987092 ttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaaccccggacacc 46987155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 47607965 - 47607902
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||| ||||||||| |||||||||||  |||| |||| |||||||||    
T  47607965 ttagctcagttggtagggacattacataatatatgcaaggtccagggttcaaactccggccacc 47607902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 423 - 485
Target Start/End: Original strand, 5352335 - 5352397
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 485  Q
    |||||||||||||||  |||||||||||||| || ||||||||||| ||  || |||||||||    
T  5352335 ttagctcagttggtaaggacaatacataatatatacaaggtccgagattcgaatcccggccac 5352397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 412 - 486
Target Start/End: Original strand, 5579688 - 5579762
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||| ||| |||||||||||||||  |||| | ||||||| |||||||||| | |||| |||||||| |||||    
T  5579688 tccttgtgagcttagctcagttggtagggacagtgcataatatatgcaaggtctggggttcaaaccccgaccacc 5579762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 427 - 485
Target Start/End: Complemental strand, 19626576 - 19626518
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 485  Q
    |||||||||| | |||||| ||||||| |||||||||||| |||| |||| ||||||||    
T  19626576 ctcagttggtttggacaatgcataatatatgcaaggtccggggttcaaacaccggccac 19626518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 424 - 486
Target Start/End: Complemental strand, 27833455 - 27833393
Alignment:
Q  424 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||||||  |||||| ||||||| ||| |||||||| |||| |||||||| |||||    
T  27833455 tagctcagttggtaaggacaatgcataatatatgtaaggtccggggttcaaaccccgaccacc 27833393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 423 - 485
Target Start/End: Original strand, 46737791 - 46737853
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 485  Q
    ||||||||||| || | |||||| ||||||| |||||||||||| |||| |||| ||||||||    
T  46737791 ttagctcagtttgtttggacaatgcataatatatgcaaggtccggggttcaaacaccggccac 46737853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 461
Target Start/End: Complemental strand, 3672618 - 3672569
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaag 461  Q
    |||||| ||| |||||||||||| ||| |||||||||||||| |||||||    
T  3672618 tccttgtgagtttagctcagttgatatggacaatacataatatatgcaag 3672569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 468
Target Start/End: Original strand, 8615029 - 8615074
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgag 468  Q
    |||||||||||||||  |||||| ||||||| ||||||||||||||    
T  8615029 ttagctcagttggtaaggacaatgcataatatatgcaaggtccgag 8615074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 484
Target Start/End: Complemental strand, 43579108 - 43579047
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcca 484  Q
    |||||||||||||||  |||||| |||||||||||||| ||||  ||||  |||||||||||    
T  43579108 ttagctcagttggtagggacaatgcataatacatgcaaagtcctgggttcgaaccccggcca 43579047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 56551647 - 56551584
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  56551647 ttagctcagttggtaaggacaatgcataatatatgcaaggtccgaggttcaaaccccggccacc 56551584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 423 - 485
Target Start/End: Complemental strand, 47814306 - 47814244
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 485  Q
    |||||||||||||||| ||||| |||||||| |||||||||||| |||| |||||||||||||    
T  47814306 ttagctcagttggtatggacaacacataatatatgcaaggtccggggttcaaaccccggccac 47814244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 2431003 - 2431066
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||||||||||||||||||||| | |||||||||  |||||| |||||||| |||||    
T  2431003 ttagctcagttggtattgacaatacataaaatatgcaaggtatgaggttcaaaccccgaccacc 2431066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 423 - 482
Target Start/End: Complemental strand, 10564520 - 10564461
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggc 482  Q
    |||||||||||||||| |||||||||||||| ||| |||||| |||||| ||||||||||    
T  10564520 ttagctcagttggtatggacaatacataatatatgtaaggtctgaggttcaaaccccggc 10564461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 11949818 - 11949755
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||||| |||||||||||| |||| |||||||| |||||    
T  11949818 ttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 11949755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 419 - 486
Target Start/End: Complemental strand, 22630419 - 22630352
Alignment:
Q  419 gagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||| ||||||||||| ||||||| ||||||| |||||||||| |||||| |||||||| |||||    
T  22630419 gagattatctcagttggtagtgacaatgcataatatatgcaaggtctgaggttcaaaccccgaccacc 22630352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 427 - 486
Target Start/End: Complemental strand, 43034393 - 43034334
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||| |||||| ||||||| |||||||||| |||||| ||||||||||||||    
T  43034393 ctcagttggtatggacaatgcataatatatgcaaggtctgaggttcaaaccccggccacc 43034334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 486
Target Start/End: Complemental strand, 28435314 - 28435240
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||| ||| |||||||||||||||| |||||| ||||||| ||||||||| || |||| ||||||| ||||||    
T  28435314 tccttgtgagtttagctcagttggtatggacaatgcataatatatgcaaggttcggggttcaaaccccagccacc 28435240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 488
Target Start/End: Original strand, 42139850 - 42139915
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccaccgc 488  Q
    |||||| | ||||||| |||||| |||||||||||||| ||||| |||| ||||||||||||||||    
T  42139850 ttagcttatttggtatggacaatgcataatacatgcaatgtccggggttcaaaccccggccaccgc 42139915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 423 - 479
Target Start/End: Original strand, 20383494 - 20383550
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacccc 479  Q
    |||||||||||||||| |||||| ||||||| |||||||||||| |||| |||||||    
T  20383494 ttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaacccc 20383550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 3936633 - 3936696
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||||||||  ||||| ||||||| |||||||||||| ||||  |||||||||||||    
T  3936633 ttagctcagttggtatgaacaatgcataatatatgcaaggtccggggttcgaaccccggccacc 3936696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 7230286 - 7230349
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||| ||||||| |||||||||||| |||| ||||| ||||||||    
T  7230286 ttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcaaacctcggccacc 7230349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 9946433 - 9946496
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||| | |||||||||||| |||| |||||||| |||||    
T  9946433 ttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccgaccacc 9946496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 16304153 - 16304090
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||||| |||||||||||| | || ||||| ||||||||    
T  16304153 ttagctcagttggtatggacaatgcataatatatgcaaggtccgggattcaaaccgcggccacc 16304090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 486
Target Start/End: Original strand, 6087742 - 6087816
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||| ||| |||||||||||||||| || ||| ||||||| |||||||||| | |||| ||||||| ||||||    
T  6087742 tccttgtgagcttagctcagttggtatagataatgcataatatatgcaaggtctggggttcaaaccccagccacc 6087816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 479
Target Start/End: Original strand, 675924 - 675980
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacccc 479  Q
    |||||||||||||| | |||||| ||||||| |||||||||||| |||| |||||||    
T  675924 ttagctcagttggtttggacaatgcataatatatgcaaggtccggggttcaaacccc 675980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 483
Target Start/End: Original strand, 16431622 - 16431682
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcc 483  Q
    |||||||||||||||| |||||| ||||| | |||||||||| | |||| |||||||||||    
T  16431622 ttagctcagttggtatggacaatgcataaaatatgcaaggtctggggttcaaaccccggcc 16431682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 486
Target Start/End: Complemental strand, 49042029 - 49041973
Alignment:
Q  430 agttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||| ||| |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  49042029 agttgatatagacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 49041973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 836290 - 836227
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||| || |||| ||||||||||||||||| |||| ||| |||||    
T  836290 ttagctcagttggtagggacaatgcaaaatatatgcaaggtccgaggttcaaactccgaccacc 836227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 486
Target Start/End: Original strand, 2888868 - 2888943
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaa-tacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||| ||| |||||||||||||||  ||||| |  |||||| |||||||||||| |||| ||||||||||||||    
T  2888868 tccttgtgagcttagctcagttggtagggacaaatgtataatatatgcaaggtccgcggttcaaaccccggccacc 2888943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 5924655 - 5924718
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||| ||| |||||||||||||| ||| |||||||| |||| ||||| || |||||    
T  5924655 ttagctcagttgctatggacaatacataatatatggaaggtccggggttcaaacctcgaccacc 5924718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 11198334 - 11198397
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||| | || |||||  ||||||| |||||||||||| |||| ||||||||||||||    
T  11198334 ttagctcagttagaatggacaaggcataatatatgcaaggtccggggttcaaaccccggccacc 11198397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 19588160 - 19588223
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||| ||||||| |||||| ||||| | |||||||||||  |||| ||||||||||||||    
T  19588160 ttagctcaattggtatggacaatgcataaaatatgcaaggtccagggttcaaaccccggccacc 19588223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 19854560 - 19854619
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 471  Q
    |||||| ||| |||||||||||||||| |||||| ||||||| ||||||| |||| ||||    
T  19854560 tccttgtgagcttagctcagttggtatggacaatgcataatatatgcaagatccggggtt 19854619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 486
Target Start/End: Original strand, 19908702 - 19908761
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||  |||||| ||||||| |||||||||||||||||  ||||||| |||||    
T  19908702 ctcagttggtaaggacaatgcataatatatgcaaggtccgaggttcgaaccccgaccacc 19908761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 478
Target Start/End: Complemental strand, 20799449 - 20799394
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccc 478  Q
    |||||||||||||||  |||||| ||||||| |||||||||||| |||| ||||||    
T  20799449 ttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccc 20799394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 23247653 - 23247590
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||| |||||||| |||||  ||||||| |||||||||| | |||| ||||||||||||||    
T  23247653 ttagctcggttggtatggacaacgcataatatatgcaaggtctggggtttaaaccccggccacc 23247590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 23809955 - 23810018
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||  ||||||| ||||||||| |  |||| ||||||||||||||    
T  23809955 ttagctcagttggtatggacaaagcataatatatgcaaggttcagggttcaaaccccggccacc 23810018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 24665046 - 24664983
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| || ||| ||||||| |||||||||||| ||||  ||||||| |||||    
T  24665046 ttagctcagttggtatggagaatgcataatatatgcaaggtccggggttcgaaccccgaccacc 24664983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 486
Target Start/End: Complemental strand, 24885851 - 24885792
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||| |||||||||||| | |||||||||||||| || | |||| |||||||    
T  24885851 ctcagttggtatggacaatacataaaatatgcaaggtccgagtttcataccctggccacc 24885792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 486
Target Start/End: Complemental strand, 32711849 - 32711790
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||| |||||| ||||| | ||||| ||||||||||| |||||| |||||||    
T  32711849 ctcagttggtatggacaatgcataaaatatgcatggtccgaggtttaaaccctggccacc 32711790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 35287562 - 35287499
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||||||||  ||||| ||||| | |||||||||||| ||||  |||||||||||||    
T  35287562 ttagctcagttggtatgaacaatgcataaaatatgcaaggtccggggttccaaccccggccacc 35287499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 43782360 - 43782297
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||||||| ||||||| ||||||| |||||||||| | |||| ||||| || |||||    
T  43782360 ttagctcagttggtaatgacaatgcataatatatgcaaggtctgcggttcaaacctcgaccacc 43782297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 466
Target Start/End: Original strand, 51458684 - 51458727
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccg 466  Q
    |||||||||||||||| |||||||||||| | ||||||||||||    
T  51458684 ttagctcagttggtatggacaatacataaaatatgcaaggtccg 51458727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 54857670 - 54857607
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||| ||||||||  ||||| ||||| | |||||||||||| |||| ||||||||||||||    
T  54857670 ttagctcggttggtataaacaatgcataaaatatgcaaggtccggggttcaaaccccggccacc 54857607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 10519141 - 10519208
Alignment:
Q  423 ttagctcagttggtattgacaatacataata----catgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| |||||||    |||||||||| ||||||| ||||||||| ||||    
T  10519141 ttagctcagttggtatagacaatgcataatatatacatgcaaggttcgaggttcaaaccccggtcacc 10519208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 412 - 486
Target Start/End: Complemental strand, 19479543 - 19479469
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||| ||| |||||||||||  |||  ||||| ||||||| |||||||||||| |||| |||||||| |||||    
T  19479543 tccttgtgagcttagctcagttaatatgaacaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 19479469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 412 - 478
Target Start/End: Original strand, 22040645 - 22040711
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccc 478  Q
    |||||| ||| |||||||||||| ||| |||||| ||||||| ||||||||| || |||| ||||||    
T  22040645 tccttgcgagtttagctcagttgatatggacaatgcataatatatgcaaggttcggggttcaaaccc 22040711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 464
Target Start/End: Complemental strand, 2186388 - 2186347
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtc 464  Q
    |||||||||||||||| |||||| ||||||| ||||||||||    
T  2186388 ttagctcagttggtatggacaatgcataatatatgcaaggtc 2186347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 484
Target Start/End: Complemental strand, 14577562 - 14577501
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcca 484  Q
    |||||||||||||||  |||||| ||||||| |||||| |||||  ||| ||||||||||||    
T  14577562 ttagctcagttggtaaggacaatgcataatatatgcaaagtccggagttcaaaccccggcca 14577501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 465
Target Start/End: Original strand, 34247435 - 34247488
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtcc 465  Q
    |||||| ||| |||||||||||||||  |||||| ||||||| |||||||||||    
T  34247435 tccttgtgagtttagctcagttggtaaggacaatgcataatatatgcaaggtcc 34247488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 427 - 480
Target Start/End: Complemental strand, 40071019 - 40070966
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 480  Q
    ||||||||||||  ||||| ||||||| ||||||||||||| ||| ||||||||    
T  40071019 ctcagttggtatgaacaatgcataatatatgcaaggtccgaagttcaaaccccg 40070966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 464
Target Start/End: Complemental strand, 52270085 - 52270044
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtc 464  Q
    |||||||||||||||| |||||| ||||||| ||||||||||    
T  52270085 ttagctcagttggtatggacaatgcataatatatgcaaggtc 52270044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 22523067 - 22523004
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||||||||||| ||||||||| ||||||| ||| ||||||||||    
T  22523067 ttagctcagttggtatggacaatacataatatatgcaaggttcgaggttcaaatcccggccacc 22523004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 423 - 484
Target Start/End: Original strand, 7206131 - 7206192
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcca 484  Q
    |||||||||||||||  |||||| ||||||| ||||||||||||||||| ||||||||||||    
T  7206131 ttagctcagttggtagagacaatgcataatatatgcaaggtccgaggtttaaaccccggcca 7206192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 35820356 - 35820293
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||| |||||||||||||||||||| |||| ||||| ||||||||    
T  35820356 ttagctcagttggtagggacaatgcataatacatgcaaggtccggggttcaaacctcggccacc 35820293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 427 - 486
Target Start/End: Original strand, 27848167 - 27848227
Alignment:
Q  427 ctcagttggtattgacaa-tacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||||| | ||||||| |||||||||||| |||| ||||||||||||||    
T  27848167 ctcagttggtattgacaaatgcataatatatgcaaggtccggggttcaaaccccggccacc 27848227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 412 - 480
Target Start/End: Original strand, 29734686 - 29734754
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 480  Q
    |||||| ||| |||||||||||| ||| |||||| ||||||| |||||||||||| |||| ||||||||    
T  29734686 tccttgtgagtttagctcagttgatatggacaatgcataatatatgcaaggtccgtggttcaaaccccg 29734754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 10735886 - 10735823
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  ||| || ||||||| |||||||||||| |||| ||||||||||||||    
T  10735886 ttagctcagttggtagggacgatgcataatatatgcaaggtccggggttcaaaccccggccacc 10735823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 22061293 - 22061356
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||| |||||||  ||||||||||| | ||||||||||||| ||| ||||||||||||||    
T  22061293 ttagctcaattggtatgtacaatacataaaatatgcaaggtccgatgttcaaaccccggccacc 22061356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 24592901 - 24592838
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||| ||||||| |||||||||| | |||| ||||||||||||||    
T  24592901 ttagctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaaccccggccacc 24592838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 25186297 - 25186234
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||| ||| |||||| ||||||| |||||||||||| |||| ||||||| ||||||    
T  25186297 ttagctcagttgatatggacaatgcataatatatgcaaggtccggggttcaaaccccagccacc 25186234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 29544633 - 29544696
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||| ||||||  |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  29544633 ttagctcaattggtagggacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 29544696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 427 - 486
Target Start/End: Original strand, 34977214 - 34977273
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||||||||    
T  34977214 ctcagttggtatggacaatgcataatatatgcaaggtccggagtttaaaccccggccacc 34977273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 44526134 - 44526197
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||||| | |||||||||| | || ||||||||||||||    
T  44526134 ttagctcagttggtatggacaatgcataatatacgcaaggtccgggattcaaaccccggccacc 44526197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 423 - 485
Target Start/End: Complemental strand, 8781705 - 8781643
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 485  Q
    |||||||||||||||| |||||| ||||||  |||||||||||| |||| |||||||| ||||    
T  8781705 ttagctcagttggtatggacaatgcataatgtatgcaaggtccggggttcaaaccccgaccac 8781643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 486
Target Start/End: Original strand, 41859847 - 41859921
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||| ||| ||| |||||||||||| |||||| ||||| | |||||||||| | |||| ||||||||||||||    
T  41859847 tccttgtgagtttaactcagttggtatggacaatgcataaaatatgcaaggtctggggttcaaaccccggccacc 41859921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 423 - 484
Target Start/End: Complemental strand, 41763933 - 41763872
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcca 484  Q
    |||||||||||||||| |||||| |||| || ||||| |||||| |||| ||||||||||||    
T  41763933 ttagctcagttggtatggacaatgcatagtatatgcacggtccggggttcaaaccccggcca 41763872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 463
Target Start/End: Original strand, 9686463 - 9686503
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggt 463  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  9686463 ttagctcagttggtatagacaatacataatatatgcaaggt 9686503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 479
Target Start/End: Complemental strand, 20565130 - 20565074
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacccc 479  Q
    |||||||||||||||  |||||| ||||||| |||||||||||| |||| |||||||    
T  20565130 ttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaacccc 20565074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 479
Target Start/End: Complemental strand, 43117245 - 43117189
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacccc 479  Q
    |||||||||||||||  |||||| ||||||| |||||||||| |||||| |||||||    
T  43117245 ttagctcagttggtaaggacaatgcataatatatgcaaggtctgaggttcaaacccc 43117189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 486
Target Start/End: Original strand, 2256981 - 2257040
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||| |||||| ||||||| |||||||||| | ||||  |||||||||||||    
T  2256981 ctcagttggtatggacaatgcataatatatgcaaggtctggggttcgaaccccggccacc 2257040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 20455897 - 20455960
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||| ||||||| |||||| ||||||| |||||||||||| ||||  || ||||||||||    
T  20455897 ttagctcaattggtatggacaatgcataatatatgcaaggtccggggttcgaatcccggccacc 20455960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 30089055 - 30089118
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||| ||||||| || ||||||||| |||| ||||| ||||||||    
T  30089055 ttagctcagttggtagggacaatgcataatatatacaaggtccggggttcaaacctcggccacc 30089118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 30125659 - 30125722
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||| ||||||| || ||||||||| |||| ||||| ||||||||    
T  30125659 ttagctcagttggtagggacaatgcataatatatacaaggtccggggttcaaacctcggccacc 30125722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 486
Target Start/End: Complemental strand, 31815938 - 31815879
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||  |||||| ||||||| |||||||||||| |||| |||||||| |||||    
T  31815938 ctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 31815879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 42066718 - 42066781
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| || |||| |||||||||||| ||||  |||| ||||||||    
T  42066718 ttagctcagttggtatggacaatgcacaatatatgcaaggtccggggtttgaacctcggccacc 42066781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 44810711 - 44810774
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||| |||||||||  | |||||||||||| |||||||||||| |||| ||||||| ||||||    
T  44810711 ttagcccagttggtagaggcaatacataatatatgcaaggtccggggttcaaaccccagccacc 44810774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 423 - 485
Target Start/End: Original strand, 19212964 - 19213026
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 485  Q
    |||||||||||| | | |||||||||||||| ||||||||| ||| ||| |||||| ||||||    
T  19212964 ttagctcagttgttttggacaatacataatatatgcaaggttcgaagttcaaaccctggccac 19213026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 423 - 465
Target Start/End: Complemental strand, 25598617 - 25598575
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtcc 465  Q
    |||||||||||||||| |||||| ||||||| |||||||||||    
T  25598617 ttagctcagttggtatggacaatgcataatatatgcaaggtcc 25598575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 424 - 486
Target Start/End: Complemental strand, 41778998 - 41778936
Alignment:
Q  424 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||| | | |||||| ||||||| |||||||||||||||||  || ||||||||||    
T  41778998 tagctcagttgatttggacaatgcataatatatgcaaggtccgaggttcgaatcccggccacc 41778936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 484
Target Start/End: Complemental strand, 4927504 - 4927443
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcca 484  Q
    |||||||||||||||  |||||  ||||||| ||| |||||||| |||| ||||||||||||    
T  4927504 ttagctcagttggtagggacaaagcataatatatgtaaggtccggggttcaaaccccggcca 4927443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 486
Target Start/End: Original strand, 11953954 - 11954014
Alignment:
Q  425 agctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||  |||||||||||||| |||||| |||| || || ||||||||||||||    
T  11953954 agctcagttggtagggacaatacataatatatgcaatgtccaagatt-aaaccccggccacc 11954014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 440 - 485
Target Start/End: Original strand, 42791318 - 42791363
Alignment:
Q  440 gacaatacataatacatgcaaggtccgaggttgaaaccccggccac 485  Q
    |||||| ||||||| |||||||||||| |||| |||||||||||||    
T  42791318 gacaatgcataatatatgcaaggtccggggttcaaaccccggccac 42791363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 412 - 486
Target Start/End: Original strand, 7717 - 7791
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||| ||| ||| |||||||||||| |||||| ||||| ||||||||||||||||||| |||||||| |||||    
T  7717 tccttgcgagcttaactcagttggtatggacaatgcataaaacatgcaaggtccgaggttcaaaccccgaccacc 7791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 185269 - 185332
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||| | ||||||| |||| |||| ||||||||| ||||    
T  185269 ttagctcagttggtatggacaatgcataaaatatgcaagatccggggttcaaaccccggtcacc 185332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 412 - 486
Target Start/End: Complemental strand, 38131025 - 38130951
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||| ||| ||| |||||||||||| |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  38131025 tccttgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 38130951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 25340979 - 25340916
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||| | |||||||||||| |||| ||||||||||||||    
T  25340979 ttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccggccacc 25340916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 25441555 - 25441492
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||||| |||||||||| | |||| ||||||||||||||    
T  25441555 ttagctcagttggtatggacaatgcataatatatgcaaggtctggggttcaaaccccggccacc 25441492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 414 - 486
Target Start/End: Complemental strand, 48849826 - 48849755
Alignment:
Q  414 cttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||| ||| ||| |||||||||||| |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  48849826 cttgtgagcttaactcagttggtat-gacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 48849755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 427 - 486
Target Start/End: Original strand, 4601854 - 4601913
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||| | |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  4601854 ctcagttggtttggacaatgcataataaatgcaaggtccggggttcaaaccccggccacc 4601913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 14827531 - 14827594
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||| | ||||||| |||| |||| ||||||||||||||    
T  14827531 ttagctcagttggtatggacaatgcataaaatatgcaagatccggggtttaaaccccggccacc 14827594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 478
Target Start/End: Complemental strand, 24428528 - 24428473
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccc 478  Q
    |||||||||||||||| |||||| ||||||| |||||| |||||||||| ||||||    
T  24428528 ttagctcagttggtatggacaatgcataatatatgcaaagtccgaggttcaaaccc 24428473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 29631192 - 29631255
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||||| ||||||||| || | || ||||||||||||||    
T  29631192 ttagctcagttggtatggacaatgcataatatatgcaaggttcgggattcaaaccccggccacc 29631255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 35863868 - 35863805
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||||||||||| |||||||||| | |||| ||||| ||||||||    
T  35863868 ttagctcagttggtaaggacaatacataatatatgcaaggtctggggttcaaacctcggccacc 35863805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 45431954 - 45432017
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||| ||||||| |||||||||||| |||| |||||| |||||||    
T  45431954 ttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccctggccacc 45432017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 45885532 - 45885469
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||  | ||||||| |||||||||| |||||| ||||||||||||||    
T  45885532 ttagctcagttggtatggaccttgcataatatatgcaaggtctgaggttcaaaccccggccacc 45885469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 486
Target Start/End: Original strand, 53996294 - 53996368
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||| ||| |||||||||||||||| |||||| ||||||| |||||||||| | ||||  || ||||||||||    
T  53996294 tccttgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggggttcgaatcccggccacc 53996368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 466
Target Start/End: Complemental strand, 977996 - 977953
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccg 466  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||    
T  977996 ttagctcagttggtatggacaatgcataatatatgcaaggtccg 977953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 2662098 - 2662161
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||| ||||||| ||||||||| ||| ||| |||| |||||||||    
T  2662098 ttagctcagttggtaaagacaatgcataatatatgcaaggttcgaagtttaaactccggccacc 2662161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 11358240 - 11358303
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||| |||||||  |||||| ||||||| ||||||| |||| |||| ||||||||||||||    
T  11358240 ttagctcggttggtagcgacaattcataatatatgcaagatccggggttcaaaccccggccacc 11358303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 419 - 478
Target Start/End: Complemental strand, 16663295 - 16663236
Alignment:
Q  419 gagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccc 478  Q
    ||||||| |||||||||||| || ||| ||||||| |||||||||||| |||| ||||||    
T  16663295 gagattatctcagttggtatggataatgcataatatatgcaaggtccggggttcaaaccc 16663236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 16793029 - 16792966
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||| |||||||||| |||||| ||||||| |||||||||||  |||| ||||||||| ||||    
T  16793029 ttagcacagttggtatagacaatgcataatatatgcaaggtccagggttcaaaccccggtcacc 16792966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 466
Target Start/End: Complemental strand, 21914890 - 21914847
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccg 466  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||    
T  21914890 ttagctcagttggtaatgacaatacataatgtatgcaaggtccg 21914847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 22722408 - 22722471
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||| ||||  ||||| ||||| | ||||||||||||||||| |||||||| |||||    
T  22722408 ttagctcagttagtatgaacaatgcataaaatatgcaaggtccgaggttcaaaccccgaccacc 22722471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 27185483 - 27185546
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||||||||||| |||||||||| | |||| ||||| || |||||    
T  27185483 ttagctcagttggtagggacaatacataatatatgcaaggtctggggttcaaacctcgaccacc 27185546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 32843317 - 32843254
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||| | |||||| ||||| | |||||||||| | |||| ||||||||||||||    
T  32843317 ttagctcagttggtttggacaatgcataaaatatgcaaggtctggggttcaaaccccggccacc 32843254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 34899103 - 34899166
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||| |||  |||||| ||||||| |||||||||||| |||| |||||||| |||||    
T  34899103 ttagctcagttcgtagggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 34899166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 486
Target Start/End: Complemental strand, 51882251 - 51882192
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||| |||||| ||||||| ||||||| |||  |||| ||||||||||||||    
T  51882251 ctcagttggtatggacaatgcataatatatgcaagatccagggttcaaaccccggccacc 51882192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 52119382 - 52119445
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||| ||||||| ||||||||| || ||||  |||||||||||||    
T  52119382 ttagctcagttggtaaggacaatgcataatatatgcaaggttcggggttcgaaccccggccacc 52119445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 440 - 486
Target Start/End: Original strand, 8075808 - 8075854
Alignment:
Q  440 gacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||| ||||||| |||||||||| |||||| ||||||||||||||    
T  8075808 gacaatgcataatatatgcaaggtctgaggttcaaaccccggccacc 8075854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 424 - 486
Target Start/End: Complemental strand, 22799780 - 22799718
Alignment:
Q  424 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||| |||  |||||| ||||| ||||||||||||||||||| ||||| || |||||    
T  22799780 tagctcagtttgtaaggacaatgcataaaacatgcaaggtccgaggttcaaacctcgaccacc 22799718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 423 - 485
Target Start/End: Complemental strand, 38034864 - 38034802
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 485  Q
    ||||||||||||||   |||||||||||| | |||||||||||| |||| ||||| |||||||    
T  38034864 ttagctcagttggttgggacaatacataaaatatgcaaggtccggggttcaaacctcggccac 38034802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 428 - 466
Target Start/End: Complemental strand, 42398039 - 42398001
Alignment:
Q  428 tcagttggtattgacaatacataatacatgcaaggtccg 466  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  42398039 tcagttggtattgacaatgcataatatatgcaaggtccg 42398001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 423 - 465
Target Start/End: Complemental strand, 43345062 - 43345020
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtcc 465  Q
    ||||||||||||||||  ||||||||||||| |||||||||||    
T  43345062 ttagctcagttggtatgaacaatacataatatatgcaaggtcc 43345020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 423 - 481
Target Start/End: Original strand, 44579642 - 44579700
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccgg 481  Q
    |||||||||||||||| |||||| ||||| | |||||||||||| ||||  ||||||||    
T  44579642 ttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcgaaccccgg 44579700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 427 - 480
Target Start/End: Complemental strand, 2186478 - 2186425
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 480  Q
    |||||||||||| |||||||||||||| ||| |||||| | |||| ||||||||    
T  2186478 ctcagttggtatggacaatacataatatatgtaaggtctggggttcaaaccccg 2186425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 464
Target Start/End: Complemental strand, 10498750 - 10498709
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtc 464  Q
    |||||||||||||||| |||||| ||||||| ||||||||||    
T  10498750 ttagctcagttggtatggacaatgcataatatatgcaaggtc 10498709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 426 - 471
Target Start/End: Complemental strand, 11969702 - 11969657
Alignment:
Q  426 gctcagttggtattgacaatacataatacatgcaaggtccgaggtt 471  Q
    ||||||||||||  || ||| |||||||||||||||||||||||||    
T  11969702 gctcagttggtaaggaaaatgcataatacatgcaaggtccgaggtt 11969657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 422 - 463
Target Start/End: Complemental strand, 17507755 - 17507714
Alignment:
Q  422 attagctcagttggtattgacaatacataatacatgcaaggt 463  Q
    ||||||||||||| |||||||||| ||||||| |||||||||    
T  17507755 attagctcagttgatattgacaatgcataatatatgcaaggt 17507714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 480
Target Start/End: Complemental strand, 23148033 - 23147976
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 480  Q
    |||||||||||||||  |||||||||||||| |||| ||||||| ||||  |||||||    
T  23148033 ttagctcagttggtaaggacaatacataatatatgcgaggtccggggttcgaaccccg 23147976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 412 - 485
Target Start/End: Complemental strand, 655815 - 655742
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 485  Q
    |||||| ||| |||||||||||||||| |||||| ||||||| |||||||||||| ||||  ||||||||||||    
T  655815 tccttgtgagcttagctcagttggtatcgacaatgcataatatatgcaaggtccggggttcgaaccccggccac 655742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 26400870 - 26400933
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||| ||||||| |||||||||||||| |||||||||||| ||||  |||||||||||||    
T  26400870 ttagctcaattggtatggacaatacataatatatgcaaggtccggggtttgaaccccggccacc 26400933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 486
Target Start/End: Complemental strand, 14297023 - 14296949
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||| ||| |||||| ||||||||| |||||||||||| | ||| |||||||| |||| ||||||||||||||    
T  14297023 tccttgtgagcttagctgagttggtatggacaatacataaaatatgtaaggtccggggttcaaaccccggccacc 14296949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 427 - 486
Target Start/End: Original strand, 8569719 - 8569778
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||| ||||||| |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  8569719 ctcaattggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 8569778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 17151242 - 17151305
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||| |||||||| ||||||||||||||| |||||||||| | |||| ||||| ||||||||    
T  17151242 ttagctaagttggtagtgacaatacataatatatgcaaggtctggggttcaaacctcggccacc 17151305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 29740488 - 29740551
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||| ||||||| |||||| ||||||| | |||||||||| |||| ||||||||||||||    
T  29740488 ttagctcaattggtatggacaatgcataatatacgcaaggtccggggttcaaaccccggccacc 29740551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 32053794 - 32053857
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||||| ||||||||| || |||| |||| |||||||||    
T  32053794 ttagctcagttggtatggacaatgcataatatatgcaaggttcgtggttcaaactccggccacc 32053857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 423 - 485
Target Start/End: Original strand, 20744144 - 20744206
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 485  Q
    |||||||||||||||| |||||| ||||||| |||||||||| | |||| |||||||| ||||    
T  20744144 ttagctcagttggtatggacaatgcataatatatgcaaggtctggggttcaaaccccgaccac 20744206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 427 - 471
Target Start/End: Complemental strand, 1918509 - 1918465
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggtt 471  Q
    |||||||||||| |||||| ||||||| |||||||||||||||||    
T  1918509 ctcagttggtatagacaatgcataatatatgcaaggtccgaggtt 1918465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 486
Target Start/End: Original strand, 21598970 - 21599026
Alignment:
Q  430 agttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||  ||||||||||||| ||||||||| || |||| ||||||||||||||    
T  21598970 agttggtatgaacaatacataatatatgcaaggtacggggtttaaaccccggccacc 21599026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 486
Target Start/End: Complemental strand, 2726468 - 2726409
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||| |||||| ||||||| |||||||||||| ||||  |||||||| ||||    
T  2726468 ctcagttggtatggacaatgcataatatatgcaaggtccggggttcgaaccccggtcacc 2726409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 4455651 - 4455588
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||  ||||||| |||||||||| | |||| |||||||| |||||    
T  4455651 ttagctcagttggtatggacaaggcataatatatgcaaggtctggggttcaaaccccgaccacc 4455588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 5040888 - 5040825
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  ||||| |||||||| ||||||||||||  ||| |||| |||||||||    
T  5040888 ttagctcagttggtaaagacaaaacataatatatgcaaggtccggtgttcaaactccggccacc 5040825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 478
Target Start/End: Complemental strand, 7081709 - 7081654
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccc 478  Q
    |||||||||||| ||  |||||||||||||| ||||||||||  ||||||||||||    
T  7081709 ttagctcagttgataaagacaatacataatatatgcaaggtctaaggttgaaaccc 7081654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 478
Target Start/End: Complemental strand, 8637492 - 8637437
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccc 478  Q
    |||| ||||||||||  |||||| ||||||| ||||||||||||||||| ||||||    
T  8637492 ttagttcagttggtagggacaatgcataatatatgcaaggtccgaggttcaaaccc 8637437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 13376318 - 13376381
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||| ||||||| |||||| ||||||||||||| |||||| ||||  ||||| |||||||    
T  13376318 ttagctcaattggtatggacaatgcataatacatgcatggtccggggttctaaccctggccacc 13376381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 466
Target Start/End: Complemental strand, 18254156 - 18254113
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccg 466  Q
    |||||||||||||||  |||||| ||||||||||||||||||||    
T  18254156 ttagctcagttggtaaggacaatgcataatacatgcaaggtccg 18254113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 21847200 - 21847263
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||||||||||| ||||||||| || ||||  || ||||||||||    
T  21847200 ttagctcagttggtagggacaatacataatatatgcaaggtacggggttcgaatcccggccacc 21847263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 478
Target Start/End: Original strand, 31971539 - 31971590
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccc 478  Q
    |||||||||||  |||||| ||||||| ||||||||||||||||| ||||||    
T  31971539 ctcagttggtaaggacaatgcataatatatgcaaggtccgaggttcaaaccc 31971590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 33824887 - 33824950
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||| ||  |||||| ||||||| |||||||||||| |||| ||||| ||||||||    
T  33824887 ttagctcagttgataaggacaatgcataatatatgcaaggtccggggttcaaacctcggccacc 33824950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 484
Target Start/End: Original strand, 2473609 - 2473670
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcca 484  Q
    ||||||||||| |||  |||||||||||||| |||||||||  | |||| ||||||||||||    
T  2473609 ttagctcagttagtagggacaatacataatatatgcaaggtatggggtttaaaccccggcca 2473670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 464
Target Start/End: Original strand, 8810646 - 8810687
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtc 464  Q
    |||||||||||||||  |||||||||||||| ||||||||||    
T  8810646 ttagctcagttggtaaagacaatacataatatatgcaaggtc 8810687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 480
Target Start/End: Complemental strand, 9392723 - 9392666
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 480  Q
    |||||||||||| |||  | ||| ||||||| ||||||||||||||||| ||||||||    
T  9392723 ttagctcagttgttatgaaaaatgcataatatatgcaaggtccgaggtttaaaccccg 9392666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 441 - 486
Target Start/End: Original strand, 15187087 - 15187132
Alignment:
Q  441 acaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||| ||||||| ||||||||||||||||| |||||||| |||||    
T  15187087 acaatgcataatatatgcaaggtccgaggttcaaaccccgaccacc 15187132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 441 - 486
Target Start/End: Complemental strand, 15473519 - 15473474
Alignment:
Q  441 acaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||| ||||||| ||||||||||||||||| |||||||| |||||    
T  15473519 acaatgcataatatatgcaaggtccgaggttcaaaccccgaccacc 15473474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 17738 - 17800
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| |||||||||||||||||||| |||| ||||||| ||||||    
T  17738 ttagctcagttggtatggacaatgcataatacatgcaaggtccg-ggttcaaaccccagccacc 17800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 32051587 - 32051524
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||| | |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  32051587 ttagctcagttggtttggacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 32051524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 428 - 486
Target Start/End: Complemental strand, 12800950 - 12800892
Alignment:
Q  428 tcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||| |||||||||||||| |||||||||||| |||| |||||||| |||||    
T  12800950 tcagttggtatggacaatacataatatatgcaaggtccggggttcaaaccccgaccacc 12800892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 429 - 486
Target Start/End: Original strand, 12748913 - 12748970
Alignment:
Q  429 cagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||| |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  12748913 cagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 12748970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 488
Target Start/End: Original strand, 13286137 - 13286201
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccaccgc 488  Q
    |||||||||||||||| |||||| ||||||| ||||||| |||| |||| ||||||||||||||||    
T  13286137 ttagctcagttggtatagacaatgcataatatatgcaagatccg-ggttcaaaccccggccaccgc 13286201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 410 - 486
Target Start/End: Complemental strand, 8717543 - 8717467
Alignment:
Q  410 tatccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||| | ||| |||||||||||||||| |||||| ||||||| ||||||||| || |||| ||||| ||||||||    
T  8717543 tatcctcgtgagtttagctcagttggtatggacaatgcataatatatgcaaggttcggggttcaaacctcggccacc 8717467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 412 - 464
Target Start/End: Complemental strand, 12910872 - 12910820
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtc 464  Q
    |||||| |||||||||||||||||||| |||||| ||||||| ||||||||||    
T  12910872 tccttgtgagattagctcagttggtatggacaatgcataatatatgcaaggtc 12910820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 424 - 488
Target Start/End: Original strand, 36781415 - 36781479
Alignment:
Q  424 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccaccgc 488  Q
    ||||||||||||||  |||||||||||||| |||||| ||||| |||| |||||||| |||||||    
T  36781415 tagctcagttggtaaggacaatacataatatatgcaaagtccggggtttaaaccccgaccaccgc 36781479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 444419 - 444482
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||| ||||||  |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  444419 ttagctcaattggtaaggacaatgcataatatatgcaaggtccggggtttaaaccccggccacc 444482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 11708992 - 11709055
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||| ||||||| ||||||||||||| ||| |||||||| |||||    
T  11708992 ttagctcagttggtagggacaatgcataatatatgcaaggtccgaagttcaaaccccgaccacc 11709055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 427 - 486
Target Start/End: Complemental strand, 13357492 - 13357433
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||| |||||| ||||||| ||||||||| ||||||| ||||| ||||||||    
T  13357492 ctcagttggtatggacaatgcataatatatgcaaggtacgaggttcaaacctcggccacc 13357433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 19163591 - 19163528
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||||  |||||||||||| |||| |||||||| |||||    
T  19163591 ttagctcagttggtatggacaatgcataatttatgcaaggtccggggttcaaaccccgaccacc 19163528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 27587227 - 27587290
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||| ||| ||| |||||||||||| |||| ||||||||||||||    
T  27587227 ttagctcagttggtaaggacaatgcatgatatatgcaaggtccggggttcaaaccccggccacc 27587290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 486
Target Start/End: Complemental strand, 6235617 - 6235543
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||| ||| |||||||||||||||| ||| || ||||||| ||| |||||||| | || ||||||||||||||    
T  6235617 tccttgtgagtttagctcagttggtatggacgatgcataatatatgtaaggtccgggattcaaaccccggccacc 6235543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 486
Target Start/End: Original strand, 7996935 - 7997009
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||| ||| |||||||||||||||| |||||  ||||||| |||||||||| | |||| |||||||| |||||    
T  7996935 tccttgtgagcttagctcagttggtatggacaacgcataatatatgcaaggtctggggttcaaaccccgaccacc 7997009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 424 - 486
Target Start/End: Complemental strand, 25136898 - 25136836
Alignment:
Q  424 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||||||| |||||  ||||| | ||||||||||||||||| ||||| ||||||||    
T  25136898 tagctcagttggtatggacaaggcataaaatatgcaaggtccgaggttcaaacctcggccacc 25136836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 423 - 477
Target Start/End: Complemental strand, 42208524 - 42208470
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacc 477  Q
    |||||||||||||||  |||||| ||||||| ||||||||||||||||| |||||    
T  42208524 ttagctcagttggtaaggacaatgcataatatatgcaaggtccgaggttcaaacc 42208470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 478
Target Start/End: Original strand, 32421566 - 32421630
Alignment:
Q  414 cttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccc 478  Q
    |||| ||| ||| |||||||||||| ||||||| |||||| |||||||||||| |||| ||||||    
T  32421566 cttgtgagcttaactcagttggtatggacaatatataatatatgcaaggtccggggttcaaaccc 32421630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 467
Target Start/End: Complemental strand, 43962079 - 43962035
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccga 467  Q
    |||||||||||||||  |||||||||||||| |||||||||||||    
T  43962079 ttagctcagttggtaaggacaatacataatatatgcaaggtccga 43962035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 486
Target Start/End: Complemental strand, 15001326 - 15001267
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||| | |||||| ||||| | ||||||||||| ||||| ||||||||||||||    
T  15001326 ctcagttggtttcgacaatgcataaaatatgcaaggtccaaggttcaaaccccggccacc 15001267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 486
Target Start/End: Original strand, 17898089 - 17898148
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||| ||||| |||||||| |||||||||||| | ||  |||||||||||||    
T  17898089 ctcagttggtatggacaaaacataatatatgcaaggtccgggattctaaccccggccacc 17898148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 486
Target Start/End: Complemental strand, 32944891 - 32944832
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||| |||||| ||||| | |||||||||| |||||| |||||||| |||||    
T  32944891 ctcagttggtatggacaatgcataaaatatgcaaggtctgaggttcaaaccccgaccacc 32944832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 40679784 - 40679721
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| | ||||| |||| | |||||||||||| |||| ||||| ||||||||    
T  40679784 ttagctcagttggtatggtcaatatataaaatatgcaaggtccggggttcaaacctcggccacc 40679721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 424 - 486
Target Start/End: Complemental strand, 24838224 - 24838162
Alignment:
Q  424 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||   |||||| ||||| | |||||||||||| |||| ||||||||||||||    
T  24838224 tagctcagttggttaggacaatgcataaaatatgcaaggtccggggttcaaaccccggccacc 24838162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 423 - 465
Target Start/End: Original strand, 30427737 - 30427779
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtcc 465  Q
    |||||||||||||||| |||||| ||||||| |||||||||||    
T  30427737 ttagctcagttggtatggacaatgcataatatatgcaaggtcc 30427779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 428 - 486
Target Start/End: Original strand, 37141368 - 37141426
Alignment:
Q  428 tcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||| |||||| ||||||| ||||||||| || |||| |||| |||||||||    
T  37141368 tcagttggtatggacaatgcataatatatgcaaggttcggggttcaaactccggccacc 37141426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 468
Target Start/End: Original strand, 11771713 - 11771758
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgag 468  Q
    |||||||||||| ||  |||||||||||||| ||||||||||||||    
T  11771713 ttagctcagttgatagagacaatacataatatatgcaaggtccgag 11771758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 476
Target Start/End: Original strand, 24195255 - 24195308
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaac 476  Q
    |||||||||||| |||  ||||||||||||| |||||||||||| |||| ||||    
T  24195255 ttagctcagttgatatgaacaatacataatatatgcaaggtccggggttcaaac 24195308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 480
Target Start/End: Original strand, 37938501 - 37938558
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 480  Q
    |||||||||||||||| || ||| ||||||| |||||| |||||||||| ||| ||||    
T  37938501 ttagctcagttggtatggataatgcataatatatgcaaagtccgaggttcaaatcccg 37938558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 22522856 - 22522793
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||| |||||||| |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  22522856 ttagctcggttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 22522793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 484
Target Start/End: Complemental strand, 16133120 - 16133059
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcca 484  Q
    |||||||||||||||  |||||| ||||||| |||||||||| |||||| ||||||||||||    
T  16133120 ttagctcagttggtaaggacaatgcataatatatgcaaggtcagaggtttaaaccccggcca 16133059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 427 - 480
Target Start/End: Original strand, 20721060 - 20721113
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 480  Q
    |||||||||||| |||||||||||||| |||||||||||| |||| ||||||||    
T  20721060 ctcagttggtatggacaatacataatatatgcaaggtccggggttcaaaccccg 20721113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 410 - 471
Target Start/End: Original strand, 20927632 - 20927693
Alignment:
Q  410 tatccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 471  Q
    |||| ||| ||| |||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  20927632 tatctttgtgagcttagctcagttggtatggacaatacataatatatgcaagatccgaggtt 20927693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 6489013 - 6489076
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||| ||||||| |||||||||| | |||| ||||||||||||||    
T  6489013 ttagctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaaccccggccacc 6489076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 6624782 - 6624845
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||||| || |||||| ||||||| |||||||||||| ||||  |||||||||||||    
T  6624782 ttagctcagttggcatggacaatgcataatatatgcaaggtccggggttcgaaccccggccacc 6624845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 427 - 486
Target Start/End: Original strand, 13864354 - 13864413
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||||  ||||||||||||| |||||||||||| |||| |||||||| |||||    
T  13864354 ctcagttggtatgaacaatacataatatatgcaaggtccggggttcaaaccccgaccacc 13864413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 17090872 - 17090935
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| || ||| ||||||  |||||||||||| |||| ||||||||||||||    
T  17090872 ttagctcagttggtatggataatgcataattaatgcaaggtccggggttcaaaccccggccacc 17090935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 28207138 - 28207201
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||| | |||||||||||||||||  || ||||||||||    
T  28207138 ttagctcagttggtatggacaatgcataaaatatgcaaggtccgaggttcgaatcccggccacc 28207201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 37932336 - 37932399
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||||| |||||||||||| ||||  ||||| |||||||    
T  37932336 ttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcgaaccctggccacc 37932399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 40716004 - 40715941
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||| ||| ||| |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  40716004 ttagctcaattgatatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 40715941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 486
Target Start/End: Original strand, 18331702 - 18331776
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||| ||| |||||||| ||||||| |||||| ||||| | |||||||||||| |||| || |||||||||||    
T  18331702 tccttgtgagcttagctcacttggtatggacaatgcataaaatatgcaaggtccggggttcaagccccggccacc 18331776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 485
Target Start/End: Complemental strand, 10704397 - 10704324
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 485  Q
    |||||| ||| |||||||||||||||| |||||| ||||| | |||||||||||| |||| ||||  |||||||    
T  10704397 tccttgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaactacggccac 10704324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 486
Target Start/End: Original strand, 26655472 - 26655533
Alignment:
Q  425 agctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||| |||||| ||||||| ||| |||||||| ||||  |||||||||||||    
T  26655472 agctcagttggtatggacaatgcataatatatgtaaggtccggggttcgaaccccggccacc 26655533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 486
Target Start/End: Original strand, 26927057 - 26927118
Alignment:
Q  425 agctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||| |||||| ||||||| ||| |||||||| ||||  |||||||||||||    
T  26927057 agctcagttggtatggacaatgcataatatatgtaaggtccggggttcgaaccccggccacc 26927118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 464
Target Start/End: Complemental strand, 18489142 - 18489090
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtc 464  Q
    |||||| ||| |||||||||||||||| |||||| ||||||| ||||||||||    
T  18489142 tccttgtgagtttagctcagttggtatagacaatgcataatatatgcaaggtc 18489090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 427 - 471
Target Start/End: Original strand, 35109410 - 35109454
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggtt 471  Q
    |||||||||||  |||||||||||||| |||||||||||||||||    
T  35109410 ctcagttggtaaagacaatacataatatatgcaaggtccgaggtt 35109454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 3445302 - 3445239
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||| ||||||  |||||||||||| |||| ||| ||||||||||    
T  3445302 ttagctcagttggtaaggacaatgcataatgtatgcaaggtccggggttcaaatcccggccacc 3445239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 16036833 - 16036896
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||||| || |||||||||||||| |||||||||||  |||| |||| | |||||||    
T  16036833 ttagctcagttggcatggacaatacataatatatgcaaggtccatggttcaaactctggccacc 16036896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 26409259 - 26409322
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||||| ||| |||||||| ||||  ||||||| |||||    
T  26409259 ttagctcagttggtatggacaatgcataatatatgtaaggtccggggttcgaaccccgcccacc 26409322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 34436857 - 34436920
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||| ||||||| |||||||| ||| |||| |||||||| |||||    
T  34436857 ttagctcagttggtagggacaatgcataatatatgcaagggccggggttcaaaccccgcccacc 34436920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 412 - 486
Target Start/End: Original strand, 11720889 - 11720962
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||| ||| ||| |||||||||||  |||||| ||||||| ||||||||| || |||| ||||||||||||||    
T  11720889 tccttgtgagcttaactcagttggtagggacaatgcataatatatgcaaggt-cggggttcaaaccccggccacc 11720962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 410 - 480
Target Start/End: Original strand, 12189985 - 12190055
Alignment:
Q  410 tatccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 480  Q
    |||||||| ||  |||||| ||||||||| |||||||||||||| ||| |||||| | |||| ||||||||    
T  12189985 tatccttgtgaacttagcttagttggtatggacaatacataatatatgtaaggtcgggggttcaaaccccg 12190055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 424 - 486
Target Start/End: Complemental strand, 23036761 - 23036699
Alignment:
Q  424 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||||||| ||||| |||||||| |||||||||  |||||| ||||| | ||||||    
T  23036761 tagctcagttggtatggacaaaacataatatatgcaaggttagaggttcaaacctcagccacc 23036699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 423 - 485
Target Start/End: Original strand, 34191439 - 34191501
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 485  Q
    ||||||||||||||   |||||| ||||| | |||||||||||| |||| |||||||||||||    
T  34191439 ttagctcagttggttgggacaatgcataaaatatgcaaggtccggggttcaaaccccggccac 34191501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 427 - 485
Target Start/End: Complemental strand, 40837954 - 40837896
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 485  Q
    |||||||||||| ||||||| |||| | |||||||||||| |||| |||||||| ||||    
T  40837954 ctcagttggtatggacaatatataaaatatgcaaggtccggggttcaaaccccgaccac 40837896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 480
Target Start/End: Complemental strand, 31602880 - 31602823
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 480  Q
    ||||||||||||||||  ||||| ||||||| ||||||||| |||| || ||||||||    
T  31602880 ttagctcagttggtatgaacaatgcataatatatgcaaggttcgagattcaaaccccg 31602823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 427 - 468
Target Start/End: Complemental strand, 41650990 - 41650949
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgag 468  Q
    |||||||||||| |||||| ||||||| ||||||||||||||    
T  41650990 ctcagttggtatggacaatgcataatatatgcaaggtccgag 41650949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 8269423 - 8269360
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||||||||||| |||||||||||| |||| |||||||| |||||    
T  8269423 ttagctcagttggtaaggacaatacataatatatgcaaggtccggggttcaaaccccgaccacc 8269360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 34521245 - 34521182
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||||| |||||||||||| |||| ||||| ||||||||    
T  34521245 ttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaacctcggccacc 34521182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 482
Target Start/End: Original strand, 25532979 - 25533038
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggc 482  Q
    |||| ||||||||||| |||||| ||||||| |||||||||||| |||| ||||||||||    
T  25532979 ttagttcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggc 25533038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 34632175 - 34632238
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| ||||||  |||||| ||||||| ||||||||| ||| ||||||||||    
T  34632175 ttagctcagttggtatagacaatgtataatatatgcaagatccgaggttcaaatcccggccacc 34632238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 42045427 - 42045364
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||||| |||||||||| |  ||| ||||||||||||||    
T  42045427 ttagctcagttggtatggacaatgcataatatatgcaaggtctggagttcaaaccccggccacc 42045364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 45140061 - 45139998
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||||| |||||||||||   ||| ||||||||||||||    
T  45140061 ttagctcagttggtatggacaatgcataatatatgcaaggtccagagtttaaaccccggccacc 45139998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 52441566 - 52441503
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||  |||  |||||||||||||    
T  52441566 ttagctcagttggtatagacaatgcataatatatgcaaggtccggcgtttgaaccccggccacc 52441503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 423 - 485
Target Start/End: Original strand, 18166608 - 18166670
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 485  Q
    |||||||||||||||| |||||| ||||||| |||||| ||||| |||| |||||||| ||||    
T  18166608 ttagctcagttggtatagacaatgcataatatatgcaaagtccggggttcaaaccccgaccac 18166670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 424 - 486
Target Start/End: Original strand, 39302952 - 39303014
Alignment:
Q  424 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||||||  |||||||||||| | |||||||||| | |||| ||||||||||||||    
T  39302952 tagctcagttggtaaggacaatacataaaatatgcaaggtcggtggttcaaaccccggccacc 39303014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 424 - 480
Target Start/End: Complemental strand, 13615666 - 13615610
Alignment:
Q  424 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 480  Q
    ||||||||||||||  |||||| ||||||||||||||||||| |||||  |||||||    
T  13615666 tagctcagttggtaaggacaatgcataatacatgcaaggtccaaggttcgaaccccg 13615610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 19620582 - 19620630
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 471  Q
    |||||||||||||||  |||||||||||||| |||||||||||| ||||    
T  19620582 ttagctcagttggtaaggacaatacataatatatgcaaggtccggggtt 19620630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 479
Target Start/End: Complemental strand, 26803506 - 26803450
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacccc 479  Q
    |||||||||||||||| |||||| ||||||| |||||| ||||| |||| |||||||    
T  26803506 ttagctcagttggtatggacaatgcataatatatgcaaagtccggggttcaaacccc 26803450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 480
Target Start/End: Complemental strand, 33153946 - 33153878
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 480  Q
    |||||| ||| ||| |||||||||||  |||||| ||||||| ||| ||||||||||||| ||||||||    
T  33153946 tccttgtgagcttaactcagttggtagggacaatgcataatatatgtaaggtccgaggttcaaaccccg 33153878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 466
Target Start/End: Complemental strand, 3509996 - 3509953
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccg 466  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||    
T  3509996 ttagctcagttggtatggacaatgcataatatatgcaaggtccg 3509953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 486
Target Start/End: Complemental strand, 6000194 - 6000135
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||   |||||| ||||||| ||||||||||||||||| ||||||||| ||||    
T  6000194 ctcagttggttaggacaatgcataatatatgcaaggtccgaggttcaaaccccggacacc 6000135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 486
Target Start/End: Original strand, 8736449 - 8736504
Alignment:
Q  431 gttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||| |||||| ||||| | |||||||||||| |||| ||||||||||||||    
T  8736449 gttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccggccacc 8736504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 486
Target Start/End: Complemental strand, 9265887 - 9265828
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||| ||||||  ||||||||||||||||| | | || ||||||||||||||    
T  9265887 ctcagttggtatggacaatgtataatacatgcaaggtctgggattcaaaccccggccacc 9265828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 17139572 - 17139509
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||| ||||||| || ||||||||| |||| |||||||| |||||    
T  17139572 ttagctcagttggtagggacaatgcataatatattcaaggtccggggttcaaaccccgaccacc 17139509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 486
Target Start/End: Complemental strand, 27172773 - 27172714
Alignment:
Q  427 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||| ||||| |||||||| ||||||| ||| ||||| ||||||| ||||||    
T  27172773 ctcagttggtatggacaaaacataatatatgcaagctccaaggttcaaacccctgccacc 27172714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 41884860 - 41884797
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    ||||||||||| || | |||||||||||||| || ||||||||| ||||  |||||||||||||    
T  41884860 ttagctcagttagtttggacaatacataatatatacaaggtccggggttcgaaccccggccacc 41884797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 42888581 - 42888644
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||| | |||||||||||| ||||  |||||| ||||||    
T  42888581 ttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcgaacccccgccacc 42888644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 47528502 - 47528439
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||  |||||| ||||||| | |||||||||||||||  |||||||| ||||    
T  47528502 ttagctcagttggtaaggacaatgcataatatacgcaaggtccgaggttcgaaccccggacacc 47528439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 423 - 485
Target Start/End: Complemental strand, 41763210 - 41763148
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 485  Q
    |||||||||||||||  || ||| ||||| | |||||||||||| |||| |||||||||||||    
T  41763210 ttagctcagttggtagggataatgcataaaatatgcaaggtccggggttcaaaccccggccac 41763148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 484
Target Start/End: Original strand, 26755622 - 26755683
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcca 484  Q
    |||||||||||| ||| |||||| ||| ||| |||||||||||| |||| ||||| ||||||    
T  26755622 ttagctcagttgatatggacaatgcattatatatgcaaggtccggggttcaaacctcggcca 26755683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 480
Target Start/End: Original strand, 40680490 - 40680547
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 480  Q
    |||||| |||||||| |||||||| |||| | |||||||||||| |||| ||||||||    
T  40680490 ttagcttagttggtaatgacaatatataaaatatgcaaggtccggggttaaaaccccg 40680547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 480
Target Start/End: Original strand, 43611430 - 43611487
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 480  Q
    |||||||||||||||| |||||||||||||| ||| |||||  | |||| ||||||||    
T  43611430 ttagctcagttggtatggacaatacataatatatgtaaggtatggggttcaaaccccg 43611487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 464
Target Start/End: Original strand, 49183179 - 49183220
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtc 464  Q
    |||||||||||||||  |||||||||||||| ||||||||||    
T  49183179 ttagctcagttggtaaggacaatacataatatatgcaaggtc 49183220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 1534 - 1597
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||||| |||||| ||||| | |||||||||||| ||||  |||||| ||||||    
T  1534 ttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcgaacccccgccacc 1597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 423 - 477
Target Start/End: Original strand, 40004 - 40058
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacc 477  Q
    |||||||||||||||| |||||| ||||||| |||||||||  |||||| |||||    
T  40004 ttagctcagttggtatggacaatgcataatatatgcaaggttagaggttcaaacc 40058  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 412 - 486
Target Start/End: Original strand, 161136 - 161210
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||| ||| ||| |||||||||||| |||||| ||||| | ||||||||| || |||| |||||||| |||||    
T  161136 tccttgtgagcttaactcagttggtatggacaatgcataaaatatgcaaggttcggggttcaaaccccgaccacc 161210  T

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Target: scaffold0983 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 424 - 485
Target Start/End: Complemental strand, 3369 - 3308
Alignment:
Q  424 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 485  Q
    ||||||||||||||  ||||| |||||||| ||||||||| || |||| ||||| |||||||    
T  3369 tagctcagttggtaaggacaagacataatatatgcaaggttcggggttcaaacctcggccac 3308  T

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Target: scaffold0896 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 464
Target Start/End: Original strand, 3147 - 3188
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtc 464  Q
    |||||||||||||||  |||||||||||||| ||||||||||    
T  3147 ttagctcagttggtaaagacaatacataatatatgcaaggtc 3188  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 461
Target Start/End: Complemental strand, 31221 - 31172
Alignment:
Q  412 tccttgggagattagctcagttggtattgacaatacataatacatgcaag 461  Q
    |||||| ||| |||||||||||||||| |||||| ||||||| |||||||    
T  31221 tccttgcgagtttagctcagttggtatggacaatgcataatatatgcaag 31172  T

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Target: scaffold0040 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 480
Target Start/End: Original strand, 58859 - 58916
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 480  Q
    |||||||||||||||| || ||| ||||||  || |||||||||||||| ||||||||    
T  58859 ttagctcagttggtatggataatgcataatgtatacaaggtccgaggtttaaaccccg 58916  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 486
Target Start/End: Original strand, 75333 - 75394
Alignment:
Q  425 agctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 486  Q
    |||||||||||||  |||||| ||||||| |||||||||||| ||||  || ||||||||||    
T  75333 agctcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaatcccggccacc 75394  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 484
Target Start/End: Original strand, 239813 - 239874
Alignment:
Q  423 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcca 484  Q
    |||||||||||||||  |||||| ||||||| |||||| |||||  ||| ||||||||||||    
T  239813 ttagctcagttggtaaggacaatgcataatatatgcaaagtccggagttcaaaccccggcca 239874  T

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