View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9279_high_1 (Length: 915)
Name: NF9279_high_1
Description: NF9279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9279_high_1 |
 | |
|
| [»] chr8 (3 HSPs) |
| |
|
| [»] scaffold0114 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 750; Significance: 0; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 750; E-Value: 0
Query Start/End: Original strand, 15 - 915
Target Start/End: Complemental strand, 45384143 - 45383240
Alignment:
| Q |
15 |
acatcaggtttataaatgaaaattgctcgttgtgtactttgaccaccgtttttaaaacgaaaactaatccaatcttgattgtattttaactgtttggttt |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45384143 |
acatcaggtttataaatgaaaattgctcgttgtgtactttgaccaccgtttttaaaacgaaaactaatccaatcttgattgtattttaactgtttggttt |
45384044 |
T |
|
| Q |
115 |
tgaattatagtagctttataaacaacccaaaacaacgaggagagaaattattttaaactaattgnnnnnnnnnnnnnnnnnaatggaagagaggagtgaa |
214 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
45384043 |
tgaattatcgtagctttataaacaacccaaaacaacgaggagagaaattattttaaactaattgtttttttcaaattttttgatggaagagaggagtgaa |
45383944 |
T |
|
| Q |
215 |
gatcaaaactccaccaaaaatgaaggatttacaacgtataaaatattttatagctttatgaaggatttaaaacaagagcgcataaaatgaaaagtattct |
314 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45383943 |
gatcaaaactccaccaaaaatgaaggatttacaacgtataaaatattttatagttttatgaaggatttaaaacaagagcgcataaaatgaaaagtattct |
45383844 |
T |
|
| Q |
315 |
tacaatgaggtagcttcaggtcaggcgatcagtctccctaaatctgaaatattttatatt-agaaatgtgttgaataatctccaaaatgtggttactttg |
413 |
Q |
| |
|
|| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| || ||||||||||||||||||||||| |||||||||| | |
|
|
| T |
45383843 |
tataatgaggcagcttcaggtcaggcgatcagtctccctaagtctaaaatattttatacgcaggaatgtgttgaataatctccaaaacgtggttacttcg |
45383744 |
T |
|
| Q |
414 |
atcctaggagttcaggcggtacttgggacgggcaaatatctcaggttaccatccatgattggaagaaataaaaaagctaccttaagctttattaaagata |
513 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
45383743 |
atcctaggagttcaggcggtacttgggacgggcaaatatctcgggttaccatccatgattggaagaaataaaaaagctaccttcaactttattaaagata |
45383644 |
T |
|
| Q |
514 |
gagtatggcagaggattaatttgtggagtagcaaatgcttctctaaagccggcagagaggtaatgataaaatctgttctacaagccataccttcgtatgt |
613 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
45383643 |
gagtatggcagaggattaatttgtggagtagcaaatgctcgtctaaagccagcagagaggtaatgataaaatctgctctacaagccataccttcgtatgt |
45383544 |
T |
|
| Q |
614 |
tatgagcatatttttgctgccttctactcttgttgacgagatg--aaaaaatgataaatgccttttggtggggaaatggtggaaacaataatagaggtat |
711 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45383543 |
tatgagcatatttttgctgcctactactcttgttgacgagattgaaaaaaatgataaatgccttttggtggggaaatggtggaaacaataatagaggtat |
45383444 |
T |
|
| Q |
712 |
tcattggctatcttgggataaactcattgttcataaaaaatttggcgggatgggcttcaaagatttgacggctttcaatttggcaatgctaggaaagcaa |
811 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45383443 |
tcattggctatcttgggataaactcattgttcataaaaaatttggcgggatgggcttcaaagatttgacggctttcaatttggcaatgctaggaaagcaa |
45383344 |
T |
|
| Q |
812 |
gggtggaaattccaaacccaacctgaatgtttggtcacaagactgtttaaagctaggtactttccacgtggtaattatattgaggcgaagctaggccata |
911 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45383343 |
gggtggaaattccaaacccaacctgaatgtttggtcacaagactgtttaaagctaggtactttccacgtggtaattatattgaggcgaagctaggccata |
45383244 |
T |
|
| Q |
912 |
atcc |
915 |
Q |
| |
|
|||| |
|
|
| T |
45383243 |
atcc |
45383240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 474 - 837
Target Start/End: Complemental strand, 898552 - 898188
Alignment:
| Q |
474 |
ggaagaaataaaaaagctaccttaagctttattaaagatagagtatggcagaggattaatttgtggagtagcaaatgcttctctaaagccggcagagagg |
573 |
Q |
| |
|
|||||||| ||| |||| ||||| |||||||||||||||||||| ||||||| || |||| ||||| || || || || | ||||| || ||||| | |
|
|
| T |
898552 |
ggaagaaacaaacaagcaaccttcagctttattaaagatagagtttggcagaaaatcaattcctggagcagtaagtgtttaccaaaagctggtagagaag |
898453 |
T |
|
| Q |
574 |
taatgataaaatctgttctacaagccataccttcgtatgttatgagcatatttttgctgccttctactcttgttgacgagat-gaaaaaatgataaatgc |
672 |
Q |
| |
|
| |||||||| | |||| | |||||||| || || || ||||||||||| ||| || | | |||| ||||| |||| | || ||||||||| ||||| | |
|
|
| T |
898452 |
ttatgataaagtatgttttgcaagccattccatcttacgttatgagcatttttctgttactttcttctcttattgatgctattgaaaaaatgctaaattc |
898353 |
T |
|
| Q |
673 |
cttttggtggggaaatggtggaaacaataatagaggtattcattggctatcttgggataaactcattgttcataaaaaatttggcgggatgggcttcaaa |
772 |
Q |
| |
|
||||||||||| ||||| |||| |||||||||||||||||| ||||| || ||||| || || | | | || || |||| ||| ||| || | || ||| |
|
|
| T |
898352 |
attttggtgggggaatggaggaagcaataatagaggtattcactggctttcctgggagaagcttactatgcacaagaaatatggtggggtgagttttaaa |
898253 |
T |
|
| Q |
773 |
gatttgacggctttcaatttggcaatgctaggaaagcaagggtggaaattccaaacccaacctga |
837 |
Q |
| |
|
||||| ||||| ||||| || |||||| | || || ||||||||||| || |||||||| ||||| |
|
|
| T |
898252 |
gatttaacggccttcaacttagcaatgttgggtaaacaagggtggaagtttcaaacccatcctga |
898188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 537 - 828
Target Start/End: Original strand, 7174464 - 7174756
Alignment:
| Q |
537 |
tggagtagcaaatgcttctctaaagccggcagagaggtaatgataaaatctgttctacaagccataccttcgtatgttatgagcatatttttgctgcctt |
636 |
Q |
| |
|
||||||||| ||||||| || |||||||| |||||||||||||||||||||| |||| | || ||||| || ||||||| | |||||||| ||| |
|
|
| T |
7174464 |
tggagtagccaatgcttatcaaaagccgggcgagaggtaatgataaaatctgtcttacaggtaattccttcatacattatgagtgtgtttttgcttccta |
7174563 |
T |
|
| Q |
637 |
ctactcttgttgacgaga-tgaaaaaatgataaatgccttttggtggggaaatggtggaaacaataatagaggtattcattggctatcttgggataaact |
735 |
Q |
| |
|
| ||||| || ||||| | |||||| ||| |||||| ||| ||||||||| | || || | | | | ||| ||||||||||||||||||||||| || |
|
|
| T |
7174564 |
ccactctggtggacgaaattgaaaagatggtaaatggcttctggtggggacacggaggtagtaggagaaaaggaattcattggctatcttgggataagct |
7174663 |
T |
|
| Q |
736 |
cattgttcataaaaaatttggcgggatgggcttcaaagatttgacggctttcaatttggcaatgctaggaaagcaagggtggaaattccaaac |
828 |
Q |
| |
|
| ||| || ||||| | ||| || ||||| || || |||||||| || || ||| | | |||||||| || ||||| |||||||||||||| |
|
|
| T |
7174664 |
tactgtgcacaaaaactatgggggcatggggtttaaggatttgacagcgtttaatctagtgatgctagggaaacaaggatggaaattccaaac |
7174756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 501 - 819
Target Start/End: Original strand, 34671992 - 34672311
Alignment:
| Q |
501 |
tttattaaagatagagtatggcagaggattaatttgtggagtagcaaatgcttctctaaagccggcagagaggtaatgataaaatctgttctacaagcca |
600 |
Q |
| |
|
||||| ||||| ||||| ||||| | ||||||| | |||||| |||||||| || ||||||| ||| |||| |||||| ||||||| || ||||| | |
|
|
| T |
34671992 |
tttatcaaagacagagtgtggcaaaagattaatgcctagagtagtaaatgcttgtcgaaagccgaaagataggtgatgatagaatctgtgctgcaagcaa |
34672091 |
T |
|
| Q |
601 |
taccttcgtatgttatgagcatatttttgctgccttctactcttgttgacgagat-gaaaaaatgataaatgccttttggtggggaaatggtggaaacaa |
699 |
Q |
| |
|
|| |||| ||||||||||| | || | || ||| | || ||||| ||| | || |||||||||||||||| |||||||||||| ||||| || | || |
|
|
| T |
34672092 |
tatcttcatatgttatgagtgtgttccttcttcctaccacacttgtagaccaaatagaaaaaatgataaatggcttttggtgggggaatggagggagtaa |
34672191 |
T |
|
| Q |
700 |
taatagaggtattcattggctatcttgggataaactcattgttcataaaaaatttggcgggatgggcttcaaagatttgacggctttcaatttggcaatg |
799 |
Q |
| |
|
| ||||| ||||||||||||||||| |||| || | ||||||||||| ||| || ||||| ||||| ||||||||||| || ||| |||||||| |
|
|
| T |
34672192 |
cagaagaggaattcattggctatcttgtaataagcttagagttcataaaaatcatggaggtatggggttcaaggatttgacggcgtttaatctggcaatg |
34672291 |
T |
|
| Q |
800 |
ctaggaaagcaagggtggaa |
819 |
Q |
| |
|
|||| ||||| || ||||| |
|
|
| T |
34672292 |
ttaggtaagcagggttggaa |
34672311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 558 - 837
Target Start/End: Complemental strand, 27041487 - 27041207
Alignment:
| Q |
558 |
aaagccggcagagaggtaatgataaaatctgttctacaagccataccttcgtatgttatgagcatatttttgctgccttctactcttgttgacgagat-g |
656 |
Q |
| |
|
||||| || |||||||| ||||| || |||||| | |||||||| || || || ||||||||||| ||| || | | ||| ||||| |||| | || | |
|
|
| T |
27041487 |
aaagctggtagagaggttatgattaagtctgttttgcaagccattccctcttacgttatgagcatttttctgttactttcgtctcttattgatgctattg |
27041388 |
T |
|
| Q |
657 |
aaaaaatgataaatgccttttggtggggaaatggtggaaacaataatagaggtattcattggctatcttgggataaactcattgttcataaaaaatttgg |
756 |
Q |
| |
|
|||||||| ||||||| |||||||||| |||| |||| ||||||||||||||||||||||| |||||||| || || | | | || || ||| ||| |
|
|
| T |
27041387 |
aaaaaatgctaaatgctttttggtgggagcatggaggaagtaataatagaggtattcattggctttcttgggagaagcttactctgcacaagcaatatgg |
27041288 |
T |
|
| Q |
757 |
cgggatgggcttcaaagatttgacggctttcaatttggcaatgctaggaaagcaagggtggaaattccaaacccaacctga |
837 |
Q |
| |
|
|| ||| |||| |||||||| ||||||||||| || |||||| | || || ||||||||| || |||||||||||||| |
|
|
| T |
27041287 |
tggaatgagctttaaagatttaacggctttcaacttagcaatgttgggtaaataagggtggatgtttcaaacccaacctga |
27041207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 460 - 619
Target Start/End: Complemental strand, 8970153 - 8969994
Alignment:
| Q |
460 |
taccatccatgattggaagaaataaaaaagctaccttaagctttattaaagatagagtatggcagaggattaatttgtggagtagcaaatgcttctctaa |
559 |
Q |
| |
|
||||||| ||| | ||||||| ||||||||| ||||| | ||||||||||||||||| ||||||| ||||| | ||||| || ||||| || ||||| |
|
|
| T |
8970153 |
taccatctatggtaggaagaagtaaaaaagcaaccttcaagtttattaaagatagagtgtggcagaagattagtagctggagcagtaaatgtttgtctaa |
8970054 |
T |
|
| Q |
560 |
agccggcagagaggtaatgataaaatctgttctacaagccataccttcgtatgttatgag |
619 |
Q |
| |
|
||| || || ||||| ||||| ||||||||||| ||| | || || || ||||||||||| |
|
|
| T |
8970053 |
agcaggaagggaggtcatgatcaaatctgttcttcaatctattccatcctatgttatgag |
8969994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 828
Target Start/End: Original strand, 3237180 - 3237247
Alignment:
| Q |
761 |
atgggcttcaaagatttgacggctttcaatttggcaatgctaggaaagcaagggtggaaattccaaac |
828 |
Q |
| |
|
||||| ||||||||| | |||| || ||| | |||||||| |||||||||||||||||||||||||| |
|
|
| T |
3237180 |
atgggattcaaagatcttgcggcgtttaatgtagcaatgctcggaaagcaagggtggaaattccaaac |
3237247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 655 - 689
Target Start/End: Original strand, 42435512 - 42435546
Alignment:
| Q |
655 |
tgaaaaaatgataaatgccttttggtggggaaatg |
689 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| |
|
|
| T |
42435512 |
tgaaaaaatgataaatgccttttggtggggtaatg |
42435546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 468 - 626
Target Start/End: Complemental strand, 46389630 - 46389472
Alignment:
| Q |
468 |
atgattggaagaaataaaaaagctaccttaagctttattaaagatagagtatggcagaggattaatttgtggagtagcaaatgcttctctaaagccggca |
567 |
Q |
| |
|
|||||||| ||| ||| |||||||| || | ||| || || |||||||| ||| ||| || |||||||||||||| |||||| ||||||| || || | |
|
|
| T |
46389630 |
atgattggccgaagtaagaaagctacatttaacttcatcaaggatagagtttggaagaaaatcaatttgtggagtagtaaatgcctctctaaggctggaa |
46389531 |
T |
|
| Q |
568 |
gagaggtaatgataaaatctgttctacaagccataccttcgtatgttatgagcatattt |
626 |
Q |
| |
|
|||| ||| |||||||||||||||||||| | || || ||||| |||||||| ||||| |
|
|
| T |
46389530 |
gagaagtattgataaaatctgttctacaatcaattccaacgtattttatgagcttattt |
46389472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 782 - 823
Target Start/End: Original strand, 8529609 - 8529650
Alignment:
| Q |
782 |
gctttcaatttggcaatgctaggaaagcaagggtggaaattc |
823 |
Q |
| |
|
||||||||||| || ||||| ||||||||||||||||||||| |
|
|
| T |
8529609 |
gctttcaatttagctatgctcggaaagcaagggtggaaattc |
8529650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 503 - 846
Target Start/End: Original strand, 1510575 - 1510919
Alignment:
| Q |
503 |
tattaaagatagagtatggcagaggattaatttgtggagtagcaaatgcttctctaaagccggcagagaggtaatgataaaatctgttctacaagccata |
602 |
Q |
| |
|
||||||||| ||||| ||||| | ||||| || ||||||||||||||| || || ||||| || || ||||| ||||| |||||||| || ||||| || |
|
|
| T |
1510575 |
tattaaagacagagtgtggcaaaagattagttcgtggagtagcaaatgtttgtcgaaagctggtagggaggtgatgattaaatctgtgctgcaagcgatt |
1510674 |
T |
|
| Q |
603 |
ccttcgtatgttatgagcatatttttgctgccttctactcttgttgacgaga-tgaaaaaatgataaatgccttttggtggggaaatggtggaaacaata |
701 |
Q |
| |
|
|| || ||||| ||||| || || || ||||||| | ||| |||| | ||| ||||| || |||| ||| |||||||||||||| || | | || |
|
|
| T |
1510675 |
ccatcttatgtcatgagtattttcttattgccttcaaaccttattgattctattgagaaaattatcaatggcttctggtggggaaatggaggtagtagta |
1510774 |
T |
|
| Q |
702 |
atagaggtattcattggctatcttgggataaactcattgttcataaaaaatttggcgggatgggcttcaaagatttgacggctttcaatttggcaatgct |
801 |
Q |
| |
|
||||| ||||| ||||| ||||||||||| |||| |||||||| | | || |||||||| || | ||| || || |||| |||||||| ||| | |
|
|
| T |
1510775 |
gcagaggcattcactggctttcttgggataagctcacggttcataagacaaaaggagggatgggttttagagacttaacaacttttaatttggcgatgtt |
1510874 |
T |
|
| Q |
802 |
aggaaagcaagggtggaaattccaaacccaacctgaatgtttggt |
846 |
Q |
| |
|
||| ||||| || |||||||| ||||| |||||||| |||||||| |
|
|
| T |
1510875 |
aggcaagcagggatggaaatttcaaactcaacctgagtgtttggt |
1510919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 761 - 829
Target Start/End: Original strand, 10514780 - 10514848
Alignment:
| Q |
761 |
atgggcttcaaagatttgacggctttcaatttggcaatgctaggaaagcaagggtggaaattccaaacc |
829 |
Q |
| |
|
||||| |||||||||||||| || || ||| |||||||||| ||||| |||||||||||| | |||||| |
|
|
| T |
10514780 |
atgggtttcaaagatttgacagcatttaatgtggcaatgcttggaaaacaagggtggaaactacaaacc |
10514848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 498 - 592
Target Start/End: Original strand, 4166652 - 4166746
Alignment:
| Q |
498 |
agctttattaaagatagagtatggcagaggattaatttgtggagtagcaaatgcttctctaaagccggcagagaggtaatgataaaatctgttct |
592 |
Q |
| |
|
||||| || ||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||| || || ||||| ||||| ||||| ||||| |
|
|
| T |
4166652 |
agcttcatcaaagatagagtatggcagaagatcaatagctggagtagcaaatgcttgtctaaagcaggaagggaggtcatgatcaaatcagttct |
4166746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0114 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0114
Description:
Target: scaffold0114; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 483 - 622
Target Start/End: Complemental strand, 13281 - 13142
Alignment:
| Q |
483 |
aaaaaagctaccttaagctttattaaagatagagtatggcagaggattaatttgtggagtagcaaatgcttctctaaagccggcagagaggtaatgataa |
582 |
Q |
| |
|
|||||||| || || |||||||| || |||||||| ||||| || |||| | ||||| |||||||| || |||||||| || || ||||| ||||| | |
|
|
| T |
13281 |
aaaaaagcaactttcagctttatcaaggatagagtgtggcaaagaattagtagttggagcagcaaatgtttgtctaaagctgggagggaggttatgatca |
13182 |
T |
|
| Q |
583 |
aatctgttctacaagccataccttcgtatgttatgagcat |
622 |
Q |
| |
|
|||||||||| ||||| || || || ||||| |||||||| |
|
|
| T |
13181 |
aatctgttcttcaagctattccatcttatgtcatgagcat |
13142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 619
Target Start/End: Complemental strand, 21086765 - 21086606
Alignment:
| Q |
460 |
taccatccatgattggaagaaataaaaaagctaccttaagctttattaaagatagagtatggcagaggattaatttgtggagtagcaaatgcttctctaa |
559 |
Q |
| |
|
||||||||||| | ||| ||| ||||||||| ||||| || || || ||||||||||| ||| ||| ||||| | ||||| || ||||| || ||||| |
|
|
| T |
21086765 |
taccatccatggtaggacgaagtaaaaaagcaaccttcagtttcatcaaagatagagtgtggtagaagattagtagttggagcagtaaatgtttgtctaa |
21086666 |
T |
|
| Q |
560 |
agccggcagagaggtaatgataaaatctgttctacaagccataccttcgtatgttatgag |
619 |
Q |
| |
|
||| || || || || ||||||||||| ||||| ||| | || || || ||||||||||| |
|
|
| T |
21086665 |
agcaggaagggaagtcatgataaaatcggttcttcaatctattccatcctatgttatgag |
21086606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 794 - 828
Target Start/End: Original strand, 16331462 - 16331496
Alignment:
| Q |
794 |
gcaatgctaggaaagcaagggtggaaattccaaac |
828 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |
|
|
| T |
16331462 |
gcaatgctcggaaagcaagggtggaaattccaaac |
16331496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University